# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SNF2_N PF00176.18 CAMPEP_0188958678 - 1.4e-53 181.6 0.0 1.3e-46 158.7 0.0 3.4 2 1 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188958678 - 3.3e-11 42.9 0.0 8.4e-11 41.5 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0188958678 - 4e-08 33.3 0.0 6.5e-07 29.3 0.0 2.7 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit HDA2-3 PF11496.3 CAMPEP_0188958678 - 0.019 13.7 0.0 0.065 12.0 0.0 1.9 1 1 0 1 1 1 0 Class II histone deacetylase complex subunits 2 and 3 SNF2_N PF00176.18 CAMPEP_0188868840 - 5.3e-57 192.8 0.0 2.2e-56 190.8 0.0 2.0 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188868840 - 4.8e-14 51.9 0.0 1.3e-13 50.6 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Agenet PF05641.7 CAMPEP_0188868840 - 4.8e-10 39.4 0.0 0.00062 19.8 0.0 2.6 2 0 0 2 2 2 2 Agenet domain ResIII PF04851.10 CAMPEP_0188868840 - 6.8e-07 29.3 0.0 1.6e-05 24.7 0.0 3.2 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit zf-RanBP PF00641.13 CAMPEP_0188868840 - 0.1 11.7 1.7 0.23 10.5 1.2 1.6 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others GCC2_GCC3 PF07699.8 CAMPEP_0188868840 - 0.2 11.2 1.0 0.56 9.8 0.7 1.7 1 0 0 1 1 1 0 GCC2 and GCC3 SNF2_N PF00176.18 CAMPEP_0188866532 - 1.8e-50 171.4 0.0 2.6e-49 167.6 0.0 2.8 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188866532 - 4.2e-13 48.9 0.0 4e-12 45.8 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain SNF2_N PF00176.18 CAMPEP_0188900970 - 8.5e-52 175.8 0.0 5e-51 173.2 0.0 2.1 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188900970 - 1.8e-12 46.9 0.3 5.2e-12 45.4 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain SAP PF02037.22 CAMPEP_0188900970 - 3.4e-11 42.3 0.0 0.00039 19.8 0.0 2.7 2 0 0 2 2 2 2 SAP domain ResIII PF04851.10 CAMPEP_0188900970 - 4.4e-07 29.8 0.0 7.3e-06 25.9 0.0 2.9 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_22 PF13401.1 CAMPEP_0188900970 - 0.0037 17.3 0.1 0.26 11.4 0.0 3.9 2 2 0 2 2 2 1 AAA domain SNF2_N PF00176.18 CAMPEP_0188887758 - 1.5e-27 96.1 0.0 2.1e-27 95.7 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188887758 - 2e-11 43.6 0.0 4.2e-11 42.5 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HDA2-3 PF11496.3 CAMPEP_0188887758 - 0.00031 19.6 0.0 0.00054 18.8 0.0 1.3 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 SNF2_N PF00176.18 CAMPEP_0188878010 - 8.3e-65 218.5 1.5 1.3e-64 217.9 1.0 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188878010 - 2.9e-18 65.4 0.1 1.1e-16 60.4 0.0 3.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain HDA2-3 PF11496.3 CAMPEP_0188878010 - 1.9e-07 30.1 0.0 3.9e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 ResIII PF04851.10 CAMPEP_0188878010 - 3.6e-07 30.1 0.5 7.4e-07 29.1 0.0 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0188878010 - 7.2e-05 22.3 0.0 0.00018 21.0 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase SNF2_N PF00176.18 CAMPEP_0188861166 - 1.3e-66 224.4 0.2 1.7e-66 224.0 0.1 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188861166 - 2.5e-15 56.0 0.1 5.8e-15 54.9 0.1 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HDA2-3 PF11496.3 CAMPEP_0188861166 - 1.5e-08 33.7 0.0 2.5e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 ResIII PF04851.10 CAMPEP_0188861166 - 0.00011 22.0 0.0 0.00022 21.1 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0188861166 - 0.0041 16.6 0.0 0.034 13.6 0.0 2.2 1 1 1 2 2 2 1 DEAD/DEAH box helicase SNF2_N PF00176.18 CAMPEP_0188854620 - 4.7e-64 216.0 0.0 3.9e-32 111.2 0.0 2.4 2 0 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188854620 - 6e-14 51.6 0.0 2.4e-13 49.7 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain zf-PARP PF00645.13 CAMPEP_0188854620 - 4.7e-12 45.9 1.4 1.7e-11 44.2 0.0 2.8 2 0 0 2 2 1 1 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region zf-RING_2 PF13639.1 CAMPEP_0188854620 - 2.4e-10 40.0 5.6 2.4e-10 40.0 3.9 2.9 2 0 0 2 2 1 1 Ring finger domain SAP PF02037.22 CAMPEP_0188854620 - 1e-06 28.0 0.2 3.7e-05 23.1 0.0 3.0 2 0 0 2 2 2 1 SAP domain ResIII PF04851.10 CAMPEP_0188854620 - 1.4e-06 28.3 0.0 0.0013 18.5 0.0 3.2 3 0 0 3 3 3 2 Type III restriction enzyme, res subunit zf-C3HC4_2 PF13923.1 CAMPEP_0188854620 - 2.7e-05 24.1 5.8 2.7e-05 24.1 4.0 3.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.20 CAMPEP_0188854620 - 4e-05 23.1 6.7 4e-05 23.1 4.7 2.7 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.2 CAMPEP_0188854620 - 4.6e-05 23.4 3.7 4.6e-05 23.4 2.5 2.8 3 0 0 3 3 2 1 RING-H2 zinc finger zf-RING_5 PF14634.1 CAMPEP_0188854620 - 5.2e-05 22.8 7.0 5.2e-05 22.8 4.8 3.3 4 0 0 4 4 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.1 CAMPEP_0188854620 - 0.00058 19.5 2.4 0.0029 17.3 1.7 2.3 1 0 0 1 1 1 1 RING-type zinc-finger FANCL_C PF11793.3 CAMPEP_0188854620 - 0.005 16.7 5.5 0.021 14.7 3.8 2.2 1 0 0 1 1 1 1 FANCL C-terminal domain zf-Apc11 PF12861.2 CAMPEP_0188854620 - 0.007 16.1 2.6 0.007 16.1 1.8 2.2 2 0 0 2 2 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-Nse PF11789.3 CAMPEP_0188854620 - 0.015 14.8 5.2 0.039 13.4 3.6 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-C2HC_2 PF13913.1 CAMPEP_0188854620 - 0.018 14.7 0.1 0.018 14.7 0.1 3.5 4 0 0 4 4 4 0 zinc-finger of a C2HC-type SNF2_N PF00176.18 CAMPEP_0188916546 - 8.1e-48 162.7 0.0 1.1e-47 162.2 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188916546 - 1.3e-15 56.9 0.0 2.2e-13 49.8 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0188916546 - 0.026 14.3 0.0 0.23 11.2 0.0 2.1 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AT_hook PF02178.14 CAMPEP_0188916546 - 0.063 12.9 5.0 0.22 11.3 3.5 2.0 1 0 0 1 1 1 0 AT hook motif AAA_34 PF13872.1 CAMPEP_0188916546 - 0.066 11.9 0.0 6.1 5.5 0.0 3.1 4 0 0 4 4 4 0 P-loop containing NTP hydrolase pore-1 SNF2_N PF00176.18 CAMPEP_0188915310 - 1.6e-57 194.6 0.0 1.2e-27 96.5 0.0 2.5 2 1 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188915310 - 1.1e-13 50.8 0.0 2.5e-13 49.6 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain zf-PARP PF00645.13 CAMPEP_0188915310 - 2.1e-11 43.9 0.0 8.5e-11 41.9 0.0 2.1 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region zf-RING_2 PF13639.1 CAMPEP_0188915310 - 5.3e-09 35.7 3.0 5.3e-09 35.7 2.1 2.5 2 0 0 2 2 1 1 Ring finger domain zf-C3HC4 PF00097.20 CAMPEP_0188915310 - 5.7e-07 29.0 1.1 5.7e-07 29.0 0.8 2.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.1 CAMPEP_0188915310 - 2.8e-06 27.2 1.5 2.8e-06 27.2 1.0 3.1 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.2 CAMPEP_0188915310 - 2.7e-05 24.1 0.4 6.9e-05 22.8 0.3 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger ResIII PF04851.10 CAMPEP_0188915310 - 0.00015 21.6 0.0 0.0043 16.8 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit zf-Nse PF11789.3 CAMPEP_0188915310 - 0.013 14.9 0.1 0.03 13.8 0.1 1.6 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-Apc11 PF12861.2 CAMPEP_0188915310 - 0.028 14.2 0.7 0.063 13.1 0.5 1.6 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.1 CAMPEP_0188915310 - 0.55 10.1 7.7 0.12 12.2 2.0 2.5 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.1 CAMPEP_0188915310 - 1.2 8.8 13.9 0.075 12.7 1.3 3.3 3 0 0 3 3 3 0 zinc-RING finger domain zinc_ribbon_2 PF13240.1 CAMPEP_0188915310 - 1.9 8.0 7.5 16 5.0 0.2 4.3 3 0 0 3 3 3 0 zinc-ribbon domain SNF2_N PF00176.18 CAMPEP_0188917414 - 6.5e-51 172.9 0.0 5e-28 97.7 0.0 2.4 2 0 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188917414 - 2.5e-11 43.2 0.0 6.2e-11 42.0 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HDA2-3 PF11496.3 CAMPEP_0188917414 - 0.0023 16.7 0.2 0.0061 15.4 0.0 1.8 2 0 0 2 2 2 1 Class II histone deacetylase complex subunits 2 and 3 AAA_14 PF13173.1 CAMPEP_0188917414 - 0.11 12.4 0.0 0.29 11.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain SNF2_N PF00176.18 CAMPEP_0188916292 - 1.1e-67 228.0 0.1 4.5e-66 222.6 0.0 2.5 2 0 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188916292 - 1e-14 54.1 0.0 2.3e-14 52.9 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.18 CAMPEP_0188918960 - 2.9e-56 190.4 0.0 3.6e-55 186.8 0.0 2.4 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188918960 - 5e-12 45.5 0.0 2.2e-11 43.4 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.24 CAMPEP_0188918960 - 0.043 13.3 0.0 0.17 11.3 0.0 1.9 2 0 0 2 2 2 0 DEAD/DEAH box helicase SDA1 PF05285.7 CAMPEP_0188918960 - 1 8.5 18.4 0.027 13.7 6.7 2.5 3 0 0 3 3 3 0 SDA1 Ycf1 PF05758.7 CAMPEP_0188918960 - 2.9 5.4 4.1 4.7 4.8 2.8 1.2 1 0 0 1 1 1 0 Ycf1 SNF2_N PF00176.18 CAMPEP_0188853396 - 1.2e-52 178.5 0.0 1.6e-52 178.1 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188853396 - 2.4e-11 43.3 0.0 6.1e-11 42.0 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0188853396 - 6.1e-05 22.9 0.0 0.00012 21.9 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0188853396 - 0.00033 20.1 0.0 0.00067 19.1 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase HDA2-3 PF11496.3 CAMPEP_0188853396 - 0.00048 19.0 0.0 0.00083 18.2 0.0 1.3 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 SNF2_N PF00176.18 CAMPEP_0188851442 - 2.8e-55 187.2 0.0 5.6e-55 186.2 0.0 1.5 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188851442 - 1.5e-12 47.2 0.0 3.3e-12 46.0 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain WW PF00397.21 CAMPEP_0188851442 - 3.5e-09 36.3 10.5 0.00019 21.2 1.8 2.6 2 0 0 2 2 2 2 WW domain PHD PF00628.24 CAMPEP_0188851442 - 6.4e-08 32.1 48.6 9.6e-07 28.4 6.4 5.8 5 2 0 5 5 5 3 PHD-finger DEAD PF00270.24 CAMPEP_0188851442 - 5.8e-06 25.9 0.0 1.2e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.10 CAMPEP_0188851442 - 0.0026 17.5 0.1 0.015 15.1 0.0 2.3 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit HDA2-3 PF11496.3 CAMPEP_0188851442 - 0.015 14.0 0.2 0.46 9.2 0.0 2.3 2 0 0 2 2 2 0 Class II histone deacetylase complex subunits 2 and 3 SNF2_N PF00176.18 CAMPEP_0188852980 - 3.2e-66 223.1 0.5 5.2e-66 222.4 0.4 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0188852980 - 5.8e-15 54.9 0.1 1.7e-13 50.1 0.0 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0188852980 - 5.4e-07 29.6 0.4 2.1e-06 27.7 0.0 2.1 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HDA2-3 PF11496.3 CAMPEP_0188852980 - 1.9e-06 26.9 0.0 1.9e-06 26.9 0.0 1.5 2 0 0 2 2 2 1 Class II histone deacetylase complex subunits 2 and 3 DEAD PF00270.24 CAMPEP_0188852980 - 3.6e-05 23.3 0.2 8.8e-05 22.0 0.0 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase AAA_22 PF13401.1 CAMPEP_0188852980 - 0.02 14.9 0.0 0.072 13.2 0.0 1.9 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.4 CAMPEP_0188852980 - 0.029 13.3 1.4 0.037 13.0 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ProRS-C_2 PF09181.5 CAMPEP_0188852980 - 0.1 12.5 0.0 19 5.2 0.0 2.6 2 0 0 2 2 2 0 Prolyl-tRNA synthetase, C-terminal