cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf all_prokaryotes.tar.gz all_prokaryotes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Apicomplexa.tar.gz Apicomplexa
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Apusozoa.tar.gz Apusozoa
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Archaea.tar.gz Archaea
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Archamoebae.tar.gz Archamoebae
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Bacteria.tar.gz Bacteria
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Bicosoecida.tar.gz Bicosoecida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf blacklists.tar.gz blacklists
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Breviata.tar.gz Breviata
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Carpediemonadida.tar.gz Carpediemonadida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf ce10.tar.gz ce10
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf ce11.tar.gz ce11
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Cercozoa.tar.gz Cercozoa
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Charophyta.tar.gz Charophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Chlorarachniophyta.tar.gz Chlorarachniophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Chlorophyta.tar.gz Chlorophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Choanoflagellata.tar.gz Choanoflagellata
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Chromerida.tar.gz Chromerida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Chrysophyte.tar.gz Chrysophyte
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Ciliates.tar.gz Ciliates
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Corallochytrida.tar.gz Corallochytrida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Cryptophyte.tar.gz Cryptophyte
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Diatomes.tar.gz Diatomes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Dinoflagellata.tar.gz Dinoflagellata
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Diplomonada.tar.gz Diplomonada
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Diplonemida.tar.gz Diplonemida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Discosea.tar.gz Discosea
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf dm3.tar.gz dm3
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf dm6.tar.gz dm6
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf EBV.tar.gz EBV
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Euglenida.tar.gz Euglenida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Eustygmatophyta.tar.gz Eustygmatophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Filasterea.tar.gz Filasterea
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Fonticulida.tar.gz Fonticulida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Foraminifera.tar.gz Foraminifera
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Fungi.tar.gz Fungi
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Glaucophyta.tar.gz Glaucophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Haptophyta.tar.gz Haptophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Heterolobosea.tar.gz Heterolobosea
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf hg19.tar.gz hg19
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf hg20.tar.gz hg20
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf hg38+dm6.tar.gz hg38+dm6
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf hg38+mm10.tar.gz hg38+mm10
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf homology.tar.gz homology
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Hyphochytriomycota.tar.gz Hyphochytriomycota
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Ichthyosporea.tar.gz Ichthyosporea
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Kinetoplastida.tar.gz Kinetoplastida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Labyrinthulida.tar.gz Labyrinthulida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Land_plants.tar.gz Land_plants
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mappability_tracks.tar.gz mappability_tracks
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Microsporidia.tar.gz Microsporidia
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf miRBase.tar.gz miRBase
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mitochondrial_genomes.tar.gz mitochondrial_genomes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mm10.tar.gz mm10
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mm39.tar.gz mm39
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mm9.tar.gz mm9
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mouse_genomes.tar.gz mouse_genomes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Mycetozoa.tar.gz Mycetozoa
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf NA12878_diploid_genome.tar.gz NA12878_diploid_genome
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf NIST-spikes.tar.gz NIST-spikes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Nucleariida.tar.gz Nucleariida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf nucleomorphs.tar.gz nucleomorphs
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Oomycete.tar.gz Oomycete
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf orthologs.tar.gz orthologs
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Oxymonads.tar.gz Oxymonads
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Parabasalia.tar.gz Parabasalia
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Pelagophyta.tar.gz Pelagophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Perkinsida.tar.gz Perkinsida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf PFam.tar.gz PFam
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Phaeophyta.tar.gz Phaeophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf plasmids.tar.gz plasmids
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf plastid_genomes.tar.gz plastid_genomes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf repeats.tar.gz repeats
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Rfam.tar.gz Rfam
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Rhodelphidia.tar.gz Rhodelphidia
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Rhodophyta.tar.gz Rhodophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Rozellida.tar.gz Rozellida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf rRNA.tar.gz rRNA
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf sacCer3.tar.gz sacCer3
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf spikes.tar.gz spikes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Stramenopiles.tar.gz Stramenopiles
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Synurophyte.tar.gz Synurophyte
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf TAIR10.tar.gz TAIR10
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Thraustochytrida.tar.gz Thraustochytrida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Viruses.tar.gz Viruses
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Xanthophyta.tar.gz Xanthophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf all_prokaryotes.tar.gz all_prokaryotes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Apicomplexa.tar.gz Apicomplexa
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Apusozoa.tar.gz Apusozoa
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Archaea.tar.gz Archaea
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Archamoebae.tar.gz Archamoebae
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Bacteria.tar.gz Bacteria
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Bicosoecida.tar.gz Bicosoecida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf blacklists.tar.gz blacklists
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Breviata.tar.gz Breviata
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Carpediemonadida.tar.gz Carpediemonadida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf ce10.tar.gz ce10
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf ce11.tar.gz ce11
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Cercozoa.tar.gz Cercozoa
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Charophyta.tar.gz Charophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Chlorarachniophyta.tar.gz Chlorarachniophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Chlorophyta.tar.gz Chlorophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Choanoflagellata.tar.gz Choanoflagellata
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Chromerida.tar.gz Chromerida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Chrysophyte.tar.gz Chrysophyte
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Ciliates.tar.gz Ciliates
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Corallochytrida.tar.gz Corallochytrida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Cryptophyte.tar.gz Cryptophyte
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Diatomes.tar.gz Diatomes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Dinoflagellata.tar.gz Dinoflagellata
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Diplomonada.tar.gz Diplomonada
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Diplonemida.tar.gz Diplonemida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Discosea.tar.gz Discosea
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf dm3.tar.gz dm3
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf dm6.tar.gz dm6
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf EBV.tar.gz EBV
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Euglenida.tar.gz Euglenida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Eustygmatophyta.tar.gz Eustygmatophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Filasterea.tar.gz Filasterea
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Fonticulida.tar.gz Fonticulida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Foraminifera.tar.gz Foraminifera
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Fungi.tar.gz Fungi
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Glaucophyta.tar.gz Glaucophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Haptophyta.tar.gz Haptophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Heterolobosea.tar.gz Heterolobosea
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf hg19.tar.gz hg19
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf hg20.tar.gz hg20
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf hg38+dm6.tar.gz hg38+dm6
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf hg38+mm10.tar.gz hg38+mm10
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf homology.tar.gz homology
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Hyphochytriomycota.tar.gz Hyphochytriomycota
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Ichthyosporea.tar.gz Ichthyosporea
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Kinetoplastida.tar.gz Kinetoplastida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Labyrinthulida.tar.gz Labyrinthulida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Land_plants.tar.gz Land_plants
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mappability_tracks.tar.gz mappability_tracks
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Microsporidia.tar.gz Microsporidia
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf miRBase.tar.gz miRBase
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mitochondrial_genomes.tar.gz mitochondrial_genomes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mm10.tar.gz mm10
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mm39.tar.gz mm39
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mm9.tar.gz mm9
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf mouse_genomes.tar.gz mouse_genomes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Mycetozoa.tar.gz Mycetozoa
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf NA12878_diploid_genome.tar.gz NA12878_diploid_genome
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf NIST-spikes.tar.gz NIST-spikes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Nucleariida.tar.gz Nucleariida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf nucleomorphs.tar.gz nucleomorphs
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Oomycete.tar.gz Oomycete
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf orthologs.tar.gz orthologs
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Oxymonads.tar.gz Oxymonads
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Parabasalia.tar.gz Parabasalia
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Pelagophyta.tar.gz Pelagophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Perkinsida.tar.gz Perkinsida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf PFam.tar.gz PFam
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Phaeophyta.tar.gz Phaeophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf plasmids.tar.gz plasmids
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf plastid_genomes.tar.gz plastid_genomes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf repeats.tar.gz repeats
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Rfam.tar.gz Rfam
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Rhodelphidia.tar.gz Rhodelphidia
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Rhodophyta.tar.gz Rhodophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Rozellida.tar.gz Rozellida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf rRNA.tar.gz rRNA
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf sacCer3.tar.gz sacCer3
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf spikes.tar.gz spikes
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Stramenopiles.tar.gz Stramenopiles
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Synurophyte.tar.gz Synurophyte
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf TAIR10.tar.gz TAIR10
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Thraustochytrida.tar.gz Thraustochytrida
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Viruses.tar.gz Viruses
cd /oak/stanford/groups/akundaje/marinovg/genomes/; tar -czvf Xanthophyta.tar.gz Xanthophyta
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Amphibians.tar.gz Amphibians
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Annelida.tar.gz Annelida
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Birds.tar.gz Birds
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Brachiopoda.tar.gz Brachiopoda
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Bryozoa.tar.gz Bryozoa
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Cephalochordata.tar.gz Cephalochordata
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Chelicerata.tar.gz Chelicerata
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Cnidaria.tar.gz Cnidaria
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Crustacea.tar.gz Crustacea
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Ctenophora.tar.gz Ctenophora
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Dicyemida.tar.gz Dicyemida
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Echinodermata.tar.gz Echinodermata
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Fishes.tar.gz Fishes
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Hemichordata.tar.gz Hemichordata
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Mollusca.tar.gz Mollusca
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Myriapoda.tar.gz Myriapoda
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Myxozoa.tar.gz Myxozoa
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Nematods.tar.gz Nematods
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Nemertea.tar.gz Nemertea
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Onychophora.tar.gz Onychophora
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Orthonectida.tar.gz Orthonectida
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Phoronida.tar.gz Phoronida
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Placozoa.tar.gz Placozoa
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Plathelminthes.tar.gz Plathelminthes
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Porifera.tar.gz Porifera
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Priapulida.tar.gz Priapulida
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Reptiles.tar.gz Reptiles
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Rhombozoa.tar.gz Rhombozoa
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Rotifera.tar.gz Rotifera
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Tardigrada.tar.gz Tardigrada
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Tunicata.tar.gz Tunicata
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa; tar -czvf Xenacoelomorpha.tar.gz Xenacoelomorpha
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Acromyrmex_echinatior-Aech_3.9.tar.gz Acromyrmex_echinatior-Aech_3.9
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Acyrthosiphon_kondoi-BGA_latest_curated_HiC.tar.gz Acyrthosiphon_kondoi-BGA_latest_curated_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Acyrthosiphon_pisum.tar.gz Acyrthosiphon_pisum
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Acyrthosiphon_pisum-pea_aphid_22Mar2018_4r6ur.tar.gz Acyrthosiphon_pisum-pea_aphid_22Mar2018_4r6ur
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Aedes_aegypti.tar.gz Aedes_aegypti
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Agrilus_planipennis-Apla_2.0.tar.gz Agrilus_planipennis-Apla_2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Agrotis_ipsilon-ASM419385v1.tar.gz Agrotis_ipsilon-ASM419385v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf americana-iqSchAmer2.1.tar.gz americana-iqSchAmer2.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Amyelois_transitella-ASM118610v1.tar.gz Amyelois_transitella-ASM118610v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Anopheles_albimanus-Anop_albi_ALBI9_A_V2.tar.gz Anopheles_albimanus-Anop_albi_ALBI9_A_V2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Anopheles_darlingi.tar.gz Anopheles_darlingi
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Anopheles_gambiae.tar.gz Anopheles_gambiae
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Anopheles_quadriannulatus-Anop_quad_QUAD4_A_V1.tar.gz Anopheles_quadriannulatus-Anop_quad_QUAD4_A_V1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Anopheles_sinensis-AS2.tar.gz Anopheles_sinensis-AS2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Anoplophora_glabripennis-Agla_2.0.tar.gz Anoplophora_glabripennis-Agla_2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Apis_cerana-ACSNU-2.0.tar.gz Apis_cerana-ACSNU-2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Apis_florea-Aflo_1.0.tar.gz Apis_florea-Aflo_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Apis_mellifera.tar.gz Apis_mellifera
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Apis_mellifera-Amel_HAv3.1.tar.gz Apis_mellifera-Amel_HAv3.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Athalia_rosae-Aros_2.0.tar.gz Athalia_rosae-Aros_2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Atta_cephalotes.tar.gz Atta_cephalotes
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Atta_cephalotes-Attacep1.0.tar.gz Atta_cephalotes-Attacep1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Atta_colombica-Acol1.0.tar.gz Atta_colombica-Acol1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Bactrocera_dorsalis-ASM78921v2.tar.gz Bactrocera_dorsalis-ASM78921v2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Bactrocera_latifrons-ASM185335v1.tar.gz Bactrocera_latifrons-ASM185335v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Bactrocera_oleae-MU_Boleae_v2.tar.gz Bactrocera_oleae-MU_Boleae_v2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Bemisia_tabaci-ASM185493v1.tar.gz Bemisia_tabaci-ASM185493v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Blattella_germanica-Bger_1.1.tar.gz Blattella_germanica-Bger_1.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Bombus_impatiens-BIMP_2.2.tar.gz Bombus_impatiens-BIMP_2.2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Bombus_terrestris-Bter_1.0.tar.gz Bombus_terrestris-Bter_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Bombyx_mori.tar.gz Bombyx_mori
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Camponotus_floridanus-CamFlo_1.0.tar.gz Camponotus_floridanus-CamFlo_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Camponotus_floridanus-Cflo_v7.5.tar.gz Camponotus_floridanus-Cflo_v7.5
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Cerapachys_biroi-CerBir1.0.tar.gz Cerapachys_biroi-CerBir1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Ceratitis_capitata-Ccap_2.1.tar.gz Ceratitis_capitata-Ccap_2.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Ceratosolen_solmsi_marchali-CerSol_1.0.tar.gz Ceratosolen_solmsi_marchali-CerSol_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Chilo_suppressalis-ASM400044v1.tar.gz Chilo_suppressalis-ASM400044v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Cimex_lectularius-Clec_2.1.tar.gz Cimex_lectularius-Clec_2.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Clunio_marinus-CLUMA_1.0.tar.gz Clunio_marinus-CLUMA_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Collembola.tar.gz Collembola
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Copidosoma_floridanum-Cflo_2.0.tar.gz Copidosoma_floridanum-Cflo_2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Cryptotermes_secundus-Csec_1.0.tar.gz Cryptotermes_secundus-Csec_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Ctenocephalides_felis-ASM342690v1.tar.gz Ctenocephalides_felis-ASM342690v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Culex_quinquefasciatus.tar.gz Culex_quinquefasciatus
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Cydia_pomonella-Cpom.V2.tar.gz Cydia_pomonella-Cpom.V2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Cyphomyrmex_costatus-Ccosl1.0.tar.gz Cyphomyrmex_costatus-Ccosl1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Danaus_chrysippus-KIT_Dchrysippus_v1.3.tar.gz Danaus_chrysippus-KIT_Dchrysippus_v1.3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Danaus_plexippus.tar.gz Danaus_plexippus
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Daphnia_pulex-PA42_4.1.tar.gz Daphnia_pulex-PA42_4.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Daphnia_pulex-V1.0.tar.gz Daphnia_pulex-V1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Dendroctonus_ponderosae-DendPond_male_1.0.tar.gz Dendroctonus_ponderosae-DendPond_male_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Drosophila_ananassae.tar.gz Drosophila_ananassae
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Drosophila_erecta.tar.gz Drosophila_erecta
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Drosophila_grimshawi.tar.gz Drosophila_grimshawi
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Drosophila_mojavensis.tar.gz Drosophila_mojavensis
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Drosophila_persimilis.tar.gz Drosophila_persimilis
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Drosophila_pseudoobscura.tar.gz Drosophila_pseudoobscura
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Drosophila_sechellia.tar.gz Drosophila_sechellia
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Drosophila_simulans.tar.gz Drosophila_simulans
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Drosophila_willistoni.tar.gz Drosophila_willistoni
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Drosophila_yakuba.tar.gz Drosophila_yakuba
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf droVir2.tar.gz droVir2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf droVir3.tar.gz droVir3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Dufourea_novaeangliae-ASM127255v1.tar.gz Dufourea_novaeangliae-ASM127255v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Ephemera_danica-Edan_2.0.tar.gz Ephemera_danica-Edan_2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Euschistus_heros-E_heros_v1.0_sep_2018.tar.gz Euschistus_heros-E_heros_v1.0_sep_2018
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Folsomia_candida-ASM221717v1.tar.gz Folsomia_candida-ASM221717v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Fopius_arisanus-ASM80636v1.tar.gz Fopius_arisanus-ASM80636v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Galleria_mellonella-ASM364042v1.tar.gz Galleria_mellonella-ASM364042v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Galleria_mellonella-Honeycombmoth_v1.tar.gz Galleria_mellonella-Honeycombmoth_v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Glossina_austeni-1.0.3.tar.gz Glossina_austeni-1.0.3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Glossina_brevipalpis-1.0.3.tar.gz Glossina_brevipalpis-1.0.3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Glossina_pallidipes-1.0.3.tar.gz Glossina_pallidipes-1.0.3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Habropoda_laboriosa-ASM126327v1.tar.gz Habropoda_laboriosa-ASM126327v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Harmonia_axyridis-Haxy_hC_F2.3_v1.tar.gz Harmonia_axyridis-Haxy_hC_F2.3_v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Harpegnathos_saltator-HarSal_1.0.tar.gz Harpegnathos_saltator-HarSal_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Harpegnathos_saltator-Hsal_v8.5.tar.gz Harpegnathos_saltator-Hsal_v8.5
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Heliconius_melpomene.tar.gz Heliconius_melpomene
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Helicoverpa_armigera-Harm_1.0.tar.gz Helicoverpa_armigera-Harm_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Hyphantria_cunea-ASM370950v1.tar.gz Hyphantria_cunea-ASM370950v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Hyposmocoma_kahamanoa-ASM358959v1.tar.gz Hyposmocoma_kahamanoa-ASM358959v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Ladona_fulva-Lful_2.0.tar.gz Ladona_fulva-Lful_2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Laodelphax_striatellus-ASM333518v2.tar.gz Laodelphax_striatellus-ASM333518v2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Leptidea_sinapis-ASM90019941v1.tar.gz Leptidea_sinapis-ASM90019941v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Linepithema_humile-Lhum_UMD_V04.tar.gz Linepithema_humile-Lhum_UMD_V04
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Locusta_migratoria-LocustGenomeV1.tar.gz Locusta_migratoria-LocustGenomeV1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Lutzomyia_longipalpis-Lutzomyia_longipalpis_HiC.tar.gz Lutzomyia_longipalpis-Lutzomyia_longipalpis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Megachile_rotundata-MROT_1.0.tar.gz Megachile_rotundata-MROT_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Megaselia_scalaris.tar.gz Megaselia_scalaris
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Megathymus_ursus_violae-mvi_v1.tar.gz Megathymus_ursus_violae-mvi_v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Melanaphis_sacchari-SCAv2.0.tar.gz Melanaphis_sacchari-SCAv2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Melipona_quadrifasciata-ASM127656v1.tar.gz Melipona_quadrifasciata-ASM127656v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Microplitis_demolitor-Mdem2.tar.gz Microplitis_demolitor-Mdem2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Monomorium_pharaonis-ASM326058v2.tar.gz Monomorium_pharaonis-ASM326058v2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Nasonia_giraulti-Ngir_1.0.tar.gz Nasonia_giraulti-Ngir_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Nasonia_vitripennis.tar.gz Nasonia_vitripennis
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Nasonia_vitripensis_2.0.tar.gz Nasonia_vitripensis_2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Neodiprion_pinetum-UKY_Npine_v1.tar.gz Neodiprion_pinetum-UKY_Npine_v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Nicrophorus_vespilloides-Nicve_v1.0.tar.gz Nicrophorus_vespilloides-Nicve_v1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Nomia_melanderi-USU_Nmel_1.2.tar.gz Nomia_melanderi-USU_Nmel_1.2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Ooceraea_biroi-Obir_v5.4.tar.gz Ooceraea_biroi-Obir_v5.4
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Orussus_abietinus-Oabi_2.0.tar.gz Orussus_abietinus-Oabi_2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Pachyrhynchus_sulphureomaculatus-P_sulf_FINAL_HiC_nocotam_named.tar.gz Pachyrhynchus_sulphureomaculatus-P_sulf_FINAL_HiC_nocotam_named
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Papilio_machaon-Pap_ma_1.0.tar.gz Papilio_machaon-Pap_ma_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Papilio_memnon-Pmem_mimetic_representative_assembly_1.0.tar.gz Papilio_memnon-Pmem_mimetic_representative_assembly_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Papilio_memnon-Pmem_non_mimetic_assembly_1.0.tar.gz Papilio_memnon-Pmem_non_mimetic_assembly_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Papilio_polytes-Ppol_1.0.tar.gz Papilio_polytes-Ppol_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Papilio_xuthus-Pap_xu_1.0.tar.gz Papilio_xuthus-Pap_xu_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Papilio_xuthus-Pxut_1.0.tar.gz Papilio_xuthus-Pxut_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Pediculus_humanus.tar.gz Pediculus_humanus
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Pediculus_humanus_corporis-JCVI_LOUSE_1.0.tar.gz Pediculus_humanus_corporis-JCVI_LOUSE_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Phlebotomus_papatasi-M1_FALCON_Unzip_p_polished_purged_HiC.tar.gz Phlebotomus_papatasi-M1_FALCON_Unzip_p_polished_purged_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Plodia_interpunctella-Plodia_dt.tar.gz Plodia_interpunctella-Plodia_dt
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Plodia_interpunctella-plodia_v1.tar.gz Plodia_interpunctella-plodia_v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Pogonomyrmex_barbatus-Pbar_UMD_V03.tar.gz Pogonomyrmex_barbatus-Pbar_UMD_V03
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Polistes_dominula-Pdom_r1.2.tar.gz Polistes_dominula-Pdom_r1.2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Protaetia_brevitarsis-ASM414364v1.tar.gz Protaetia_brevitarsis-ASM414364v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Rhodnius_prolixus.tar.gz Rhodnius_prolixus
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Rhodnius_prolixus-Rhodnius_prolixus-3.0.3.tar.gz Rhodnius_prolixus-Rhodnius_prolixus-3.0.3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Rhopalosiphum_maidis-ASM367621v3.tar.gz Rhopalosiphum_maidis-ASM367621v3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Scaptodrosophila_lebanonensis-SlebRS2.tar.gz Scaptodrosophila_lebanonensis-SlebRS2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Schistocerca_americana-iqSchAmer2.1.tar.gz Schistocerca_americana-iqSchAmer2.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Schistocerca_cancellata-iqSchCanc2.1.tar.gz Schistocerca_cancellata-iqSchCanc2.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Schistocerca_nitens-iqSchNite1.1.tar.gz Schistocerca_nitens-iqSchNite1.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Schistocerca_piceifrons-iqSchPice1.1.tar.gz Schistocerca_piceifrons-iqSchPice1.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Schistocerca_serialis_cubense-iqSchSeri2.1.tar.gz Schistocerca_serialis_cubense-iqSchSeri2.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Schizaphis_graminum-ASM326497v1.tar.gz Schizaphis_graminum-ASM326497v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf silkworm.tar.gz silkworm
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Sinella_curviseta-ASM411504v1.tar.gz Sinella_curviseta-ASM411504v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Sipha_flava-YSA_version1.tar.gz Sipha_flava-YSA_version1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Spodoptera_frugiperda-ASM221328v1.tar.gz Spodoptera_frugiperda-ASM221328v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Spodoptera_litura-ASM270686v2.tar.gz Spodoptera_litura-ASM270686v2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Tanypteryx_hageni-tanypteryx.filtered_HiC.tar.gz Tanypteryx_hageni-tanypteryx.filtered_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Timema_cristinae-tcristinae_1.3c2.tar.gz Timema_cristinae-tcristinae_1.3c2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Trachymyrmex_septentrionalis-Tsep1.0.tar.gz Trachymyrmex_septentrionalis-Tsep1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Trachymyrmex_zeteki-Tzet1.0.tar.gz Trachymyrmex_zeteki-Tzet1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Tribolium_castaneum.tar.gz Tribolium_castaneum
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Tribolium_castaneum-Tcas5.2_HiC.tar.gz Tribolium_castaneum-Tcas5.2_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Trichogramma_pretiosum-Tpre_2.0.tar.gz Trichogramma_pretiosum-Tpre_2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Trichoplusia_ni-tn1.tar.gz Trichoplusia_ni-tn1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Vanessa_tameamea-ASM293899v1.tar.gz Vanessa_tameamea-ASM293899v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Vollenhovia_emeryi-V.emery_V1.0.tar.gz Vollenhovia_emeryi-V.emery_V1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Wasmannia_auropunctata-wasmannia.A_1.0.tar.gz Wasmannia_auropunctata-wasmannia.A_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects; tar -czvf Zeugodacus_cucurbitae-ASM80634v1.tar.gz Zeugodacus_cucurbitae-ASM80634v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Acinonyx_jubatus-aciJub1_HiC-DNAZoo.tar.gz Acinonyx_jubatus-aciJub1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Aeorestes_cinereus-L.cinereus_Cryan_1219_p1.0.tar.gz Aeorestes_cinereus-L.cinereus_Cryan_1219_p1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Aeorestes_cinereus-L.cinereus_Cryan_1219_p1.0_HiC.tar.gz Aeorestes_cinereus-L.cinereus_Cryan_1219_p1.0_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ailuropoda_melanoleuca-ENSEMBL79.tar.gz Ailuropoda_melanoleuca-ENSEMBL79
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ailurus_fulgens-ASM200746v1_HiC-DNAZoo.tar.gz Ailurus_fulgens-ASM200746v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Allenopithecus_nigroviridis-Allenopithecus_nigroviridis_HiC.tar.gz Allenopithecus_nigroviridis-Allenopithecus_nigroviridis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Allochrocebus_lhoesti-Allochrocebus_lhoesti_prelim_HiC.tar.gz Allochrocebus_lhoesti-Allochrocebus_lhoesti_prelim_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ammospermophilus_harrisii-Ammospermophilus_harrisii_1k.tar.gz Ammospermophilus_harrisii-Ammospermophilus_harrisii_1k
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Anoura_caudifer-AnoCau_v1_BIUU.tar.gz Anoura_caudifer-AnoCau_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Antrozous_pallidus-AntPal_v1_BIUU.tar.gz Antrozous_pallidus-AntPal_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Aonyx_cinereus-Aonyx_cinereus_HiC.tar.gz Aonyx_cinereus-Aonyx_cinereus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Arctocephalus_forsteri-Arctocephalus_forsteri_HiC.tar.gz Arctocephalus_forsteri-Arctocephalus_forsteri_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Arctocephalus_townsendi-Arctocephalus_townsendi_HiC.tar.gz Arctocephalus_townsendi-Arctocephalus_townsendi_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Artibeus_jamaicensis-ArtJam_v1_BIUU.tar.gz Artibeus_jamaicensis-ArtJam_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Artibeus_jamaicensis-GCA_014825515.1_WHU_Ajam_v2_genomic_HiC.tar.gz Artibeus_jamaicensis-GCA_014825515.1_WHU_Ajam_v2_genomic_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Artibeus_jamaicensis-WHU_Ajam_v2.tar.gz Artibeus_jamaicensis-WHU_Ajam_v2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Artibeus_jamaicensis-WHU_Ajam_v2_HiC.tar.gz Artibeus_jamaicensis-WHU_Ajam_v2_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Axis_porcinus-ASM379854v1_HiC-DNAZoo.tar.gz Axis_porcinus-ASM379854v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Babyrousa_celebensis-Babyrousa_celebensis_HiC.tar.gz Babyrousa_celebensis-Babyrousa_celebensis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Balaenoptera_borealis-Balaenoptera_borealis_HiC.tar.gz Balaenoptera_borealis-Balaenoptera_borealis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Balaenoptera_edeni-Balaenoptera_edeni_HiC.tar.gz Balaenoptera_edeni-Balaenoptera_edeni_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Balaenoptera_physalus-Balaenoptera_physalus_HiC.tar.gz Balaenoptera_physalus-Balaenoptera_physalus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Bassariscus_astutus-Bassariscus_astutus_HiC.tar.gz Bassariscus_astutus-Bassariscus_astutus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Bassariscus_sumichrasti-Bassariscus_sumichrasti_HiC.tar.gz Bassariscus_sumichrasti-Bassariscus_sumichrasti_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Bison_bison-Bison_UMD1.0_HiC-DNAZoo.tar.gz Bison_bison-Bison_UMD1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Bos_taurus-ARS-UCD1.2.tar.gz Bos_taurus-ARS-UCD1.2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Bos_taurus.Btau_4.6.1.tar.gz Bos_taurus.Btau_4.6.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Bos_taurus.UMD3.1.tar.gz Bos_taurus.UMD3.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Callithrix_jacchus.C_jacchus3.2.1.tar.gz Callithrix_jacchus.C_jacchus3.2.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Camelus_dromedarius-PRJNA234474_Ca_dromedarius_V1.0_HiC-DNAZoo.tar.gz Camelus_dromedarius-PRJNA234474_Ca_dromedarius_V1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf canFam3.tar.gz canFam3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Canis_lupus_dingo_Alpine_ecotype-Cooinda_HYBRID_SCAFFOLD_NCBI_Nresized_merged_NOT_SCAFFOLDED_HiC.tar.gz Canis_lupus_dingo_Alpine_ecotype-Cooinda_HYBRID_SCAFFOLD_NCBI_Nresized_merged_NOT_SCAFFOLDED_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Canis_lupus_dingo-ASM325472v1_HiC-DNAZoo.tar.gz Canis_lupus_dingo-ASM325472v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Canis_lupus_dingo_Desert_ecotype-sandy.combined.contigs.arrow.purged_HiC.tar.gz Canis_lupus_dingo_Desert_ecotype-sandy.combined.contigs.arrow.purged_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Canis_lupus_familiaris_Basenji-basenji_flye_rx4_medaka_pilon_jf_HiC.tar.gz Canis_lupus_familiaris_Basenji-basenji_flye_rx4_medaka_pilon_jf_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Canis_lupus_familiaris-canfamDis_HiC-DNAZoo.tar.gz Canis_lupus_familiaris-canfamDis_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Carollia_perspicillata-CarPer_v1_BIUU.tar.gz Carollia_perspicillata-CarPer_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Carollia_perspicillata-CarPer_v1_BIUU_HiC.tar.gz Carollia_perspicillata-CarPer_v1_BIUU_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Castor_canadensis-C.can_genome_v1.0_HiC-DNAZoo.tar.gz Castor_canadensis-C.can_genome_v1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cavia_porcellus.cavPor3.tar.gz Cavia_porcellus.cavPor3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cavia_porcellus-Cavpor3.0_HiC-DNAZoo.tar.gz Cavia_porcellus-Cavpor3.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cebuella_pygmaea-Cebuella_pygmaea_HiC.tar.gz Cebuella_pygmaea-Cebuella_pygmaea_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cephalorhynchus_commersonii-Cephalorhynchus_commersonii_HiC.tar.gz Cephalorhynchus_commersonii-Cephalorhynchus_commersonii_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ceratotherium_simum-CerSimSim1.0_HiC-DNAZoo.tar.gz Ceratotherium_simum-CerSimSim1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cercocebus_atys-Caty_1.0.tar.gz Cercocebus_atys-Caty_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cercocebus_torquatus-PD_0408_megahit.final.contig.tar.gz Cercocebus_torquatus-PD_0408_megahit.final.contig
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cercopithecus_campbelli-Cercopithecus_campbelli_HiC.tar.gz Cercopithecus_campbelli-Cercopithecus_campbelli_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cercopithecus_mitis-Cercopithecus_mitis_HiC.tar.gz Cercopithecus_mitis-Cercopithecus_mitis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cercopithecus_nictitans-Cercopithecus_nictitans_prelim_HiC.tar.gz Cercopithecus_nictitans-Cercopithecus_nictitans_prelim_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cercopithecus_pogonias-Cercopithecus_pogonias_prelim_HiC.tar.gz Cercopithecus_pogonias-Cercopithecus_pogonias_prelim_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Chinchilla_x-ChiLan1.0_HiC-DNAZoo.tar.gz Chinchilla_x-ChiLan1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Chlorocebus_pygerythrus-Chlorocebus_pygerythrus_prelim_HiC.tar.gz Chlorocebus_pygerythrus-Chlorocebus_pygerythrus_prelim_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.tar.gz Chlorocebus_pygerythrus-PD_0173_megahit.final.contig
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Chlorocebus_sabaeus.ChlSab1.1.tar.gz Chlorocebus_sabaeus.ChlSab1.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Chlorocebus_sabaeus-Vero_WHO_a1.0.tar.gz Chlorocebus_sabaeus-Vero_WHO_a1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Chlorocebus_sabaeus-Vero_WHO_p1.0.tar.gz Chlorocebus_sabaeus-Vero_WHO_p1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Chlorocebus_sabeus-1.1.tar.gz Chlorocebus_sabeus-1.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Choloepus_hoffmanni-C_hoffmanni-2.0.1_HiC-DNAZoo.tar.gz Choloepus_hoffmanni-C_hoffmanni-2.0.1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Choloepus_hoffmanni.choHof1.tar.gz Choloepus_hoffmanni.choHof1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Coendou_prehensilis-Coendou_prehensilis_HiC-DNAZoo.tar.gz Coendou_prehensilis-Coendou_prehensilis_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Colobus_angolensis-Cang.pa_1.0_HiC.tar.gz Colobus_angolensis-Cang.pa_1.0_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Connochaetes_taurinus-BWD_HiC.tar.gz Connochaetes_taurinus-BWD_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Corynorhinus_rafinesquii-Corynorhinus_rafinesquii_HiC.tar.gz Corynorhinus_rafinesquii-Corynorhinus_rafinesquii_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Craseonycteris_thonglongyai-CraTho_v1_BIUU.tar.gz Craseonycteris_thonglongyai-CraTho_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cricetomys_ansorgei-Cricetomys_ansorgei_HiC.tar.gz Cricetomys_ansorgei-Cricetomys_ansorgei_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cricetulus_griseus-CHOK1S_HZDv1.tar.gz Cricetulus_griseus-CHOK1S_HZDv1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cricetulus_griseus-CriGri-PICR.tar.gz Cricetulus_griseus-CriGri-PICR
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cricetulus_griseus-CriGri-PICR_HiC.tar.gz Cricetulus_griseus-CriGri-PICR_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Crocuta_crocuta-Crocuta_crocuta_HiC.tar.gz Crocuta_crocuta-Crocuta_crocuta_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cryptoprocta_ferox-Cryptoprocta_ferox_HiC.tar.gz Cryptoprocta_ferox-Cryptoprocta_ferox_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Cynopterus_brachyotis-ASM979314v1.tar.gz Cynopterus_brachyotis-ASM979314v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Dasypus_novemcinctus.Dasnov3.0.tar.gz Dasypus_novemcinctus.Dasnov3.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Dasyurus_hallucatus-Dasyurus_hallucatus_10X_01_style3pseudohapfull_HiC.tar.gz Dasyurus_hallucatus-Dasyurus_hallucatus_10X_01_style3pseudohapfull_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Dasyurus_viverrinus-Dasyurus_viverrinus_HiC.tar.gz Dasyurus_viverrinus-Dasyurus_viverrinus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Daubentonia_madagascariensis-Daubentonia_madagascariensis_HiC.tar.gz Daubentonia_madagascariensis-Daubentonia_madagascariensis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Delphinapterus_leucas-ASM228892v2_HiC-DNAZoo.tar.gz Delphinapterus_leucas-ASM228892v2_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Delphinus_delphis-Delphinus_delphisi_HiC.tar.gz Delphinus_delphis-Delphinus_delphisi_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Dendrolagus_matschiei-Dendrolagus_matschiei_HiC.tar.gz Dendrolagus_matschiei-Dendrolagus_matschiei_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Dendrolagus_matschiei-Dendrolagus_matschiei_HiC_2.tar.gz Dendrolagus_matschiei-Dendrolagus_matschiei_HiC_2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Desmodus_rotundus-ASM294091v2.tar.gz Desmodus_rotundus-ASM294091v2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Diceros_bicornis-Diceros_bicornis_HiC.tar.gz Diceros_bicornis-Diceros_bicornis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Didelphis_virginiana-dv-2k-DNAZoo.tar.gz Didelphis_virginiana-dv-2k-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Dipodomys_ordii.dipOrd1.tar.gz Dipodomys_ordii.dipOrd1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Echinops_telfairi.TENREC.tar.gz Echinops_telfairi.TENREC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Eidolon_dupreanum-Eidolon_dupreanum_HiC.tar.gz Eidolon_dupreanum-Eidolon_dupreanum_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Eidolon_helvum-ASM46528v1_HiC-DNAZoo.tar.gz Eidolon_helvum-ASM46528v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Elephas_maximus-Elephas_maximus_HiC.tar.gz Elephas_maximus-Elephas_maximus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Enhydra_lutris-ASM228890v2_HiC-DNAZoo.tar.gz Enhydra_lutris-ASM228890v2_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Eonycteris_spelaea-Espe.v1.tar.gz Eonycteris_spelaea-Espe.v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Eptesicus_fuscus-EptFus1.0.tar.gz Eptesicus_fuscus-EptFus1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Eptesicus_fuscus-EptFus1.0_HiC.tar.gz Eptesicus_fuscus-EptFus1.0_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Equus_asinus-ASM303372v1_HiC-DNAZoo.tar.gz Equus_asinus-ASM303372v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Equus_caballus.EquCab2.tar.gz Equus_caballus.EquCab2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Equus_quagga_boehmi-Equus_quagga_boehmi_HiC.tar.gz Equus_quagga_boehmi-Equus_quagga_boehmi_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Equus_zebra-Equus_zebra_HiC.tar.gz Equus_zebra-Equus_zebra_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Erethizon_dorsatum-GSC_porc_1.0_HiC.tar.gz Erethizon_dorsatum-GSC_porc_1.0_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Erignathus_barbatus-Erignathus_barbatus_HiC.tar.gz Erignathus_barbatus-Erignathus_barbatus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Erinaceus_europaeus.HEDGEHOG.tar.gz Erinaceus_europaeus.HEDGEHOG
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Erythrocebus_patas-Erythrocebus_patas_HiC.tar.gz Erythrocebus_patas-Erythrocebus_patas_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Eschrichtius_robustus-Eschrichtius_robustus_HiC.tar.gz Eschrichtius_robustus-Eschrichtius_robustus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Eubalaena_australis-RWref_HiC.tar.gz Eubalaena_australis-RWref_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Eubalaena_glacialis-Eubalaena_glacialis_HiC.tar.gz Eubalaena_glacialis-Eubalaena_glacialis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Euderma_maculatum-Euderma_maculatum_1k.tar.gz Euderma_maculatum-Euderma_maculatum_1k
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Eulemur_collaris-Eulemur_collaris_HiC.tar.gz Eulemur_collaris-Eulemur_collaris_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Eulemur_macaco-Eulemur_macaco_HiC.tar.gz Eulemur_macaco-Eulemur_macaco_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Eulemur_mongoz-Eulemur_mongoz_HiC.tar.gz Eulemur_mongoz-Eulemur_mongoz_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf felCat8.tar.gz felCat8
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf felCat9.tar.gz felCat9
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Felis_catus-6.2_felCat5.tar.gz Felis_catus-6.2_felCat5
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Felis_catus.Felis_catus_6.2.tar.gz Felis_catus.Felis_catus_6.2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Felis_nigripes-Felis_nigripes_HiC.tar.gz Felis_nigripes-Felis_nigripes_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Fukomys_damarensis-DMR_v1.0_HiC-DNAZoo.tar.gz Fukomys_damarensis-DMR_v1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Giraffa_camelopardalis-ASM165123v1_HiC-DNAZoo.tar.gz Giraffa_camelopardalis-ASM165123v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Globicephala_melas-ASM654740v1_HiC.tar.gz Globicephala_melas-ASM654740v1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Gorilla_gorilla.gorGor3.1.tar.gz Gorilla_gorilla.gorGor3.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Gorilla_gorilla-gorGor4.tar.gz Gorilla_gorilla-gorGor4
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Gymnobelideus_leadbeateri-LBP_v1_HiC.tar.gz Gymnobelideus_leadbeateri-LBP_v1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Halichoerus_grypus-Halichoerus_grypus_HiC.tar.gz Halichoerus_grypus-Halichoerus_grypus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Helarctos_malayanus-Helarctos_malayanus_HiC.tar.gz Helarctos_malayanus-Helarctos_malayanus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Heterocephalus_glaber-HetGla_female_1.0_hetGal2.tar.gz Heterocephalus_glaber-HetGla_female_1.0_hetGal2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Heterocephalus_glaber-HetGla_female_1.0_HiC.tar.gz Heterocephalus_glaber-HetGla_female_1.0_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Hipposideros_armiger-ASM189008v1.tar.gz Hipposideros_armiger-ASM189008v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Hipposideros_galeritus-HipGal_v1_BIUU.tar.gz Hipposideros_galeritus-HipGal_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Hippotragus_niger-Sable_antelope_Masurca.scf_HiC-DNAZoo.tar.gz Hippotragus_niger-Sable_antelope_Masurca.scf_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Hydrochoerus_hydrochaeris-Hydrochoerus_hydrochaeris_HiC.tar.gz Hydrochoerus_hydrochaeris-Hydrochoerus_hydrochaeris_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Hydromys_chrysogaster-Hydromys_chrysogasteri_HiC.tar.gz Hydromys_chrysogaster-Hydromys_chrysogasteri_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Hylobates_agilis-Hylobates_agilis_HiC.tar.gz Hylobates_agilis-Hylobates_agilis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ictidomys_tridecemlineatus.spetri2.tar.gz Ictidomys_tridecemlineatus.spetri2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Lagenorhynchus_acutus-Lagenorhynchus_acutus_HiC.tar.gz Lagenorhynchus_acutus-Lagenorhynchus_acutus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Lagenorhynchus_obliquidens-ASM367639v1_HiC-DNAZoo.tar.gz Lagenorhynchus_obliquidens-ASM367639v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Lagorchestes_hirsutus-Lagorchestes_hirsutus_HiC.tar.gz Lagorchestes_hirsutus-Lagorchestes_hirsutus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Lama_glama-Lama_glama_HiC.tar.gz Lama_glama-Lama_glama_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Lasiurus_borealis-LasBor_v1_BIUU.tar.gz Lasiurus_borealis-LasBor_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Lasiurus_seminolus-Lasiurus_seminolus_HiC.tar.gz Lasiurus_seminolus-Lasiurus_seminolus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Leontopithecus_chrysomelas-Leontopithecus_chrysomelasi_HiC.tar.gz Leontopithecus_chrysomelas-Leontopithecus_chrysomelasi_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Leontopithecus_rosalia-Leontopithecus_rosalia_HiC.tar.gz Leontopithecus_rosalia-Leontopithecus_rosalia_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Leopardus_tigrinus-Leopardus_tigrinus_HiC.tar.gz Leopardus_tigrinus-Leopardus_tigrinus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Leptonychotes_weddelli-Leptonychotes_weddellii_HiC.tar.gz Leptonychotes_weddelli-Leptonychotes_weddellii_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Litocranius_walleri-GRK_HiC.tar.gz Litocranius_walleri-GRK_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Lontra_canadensis-GSC_riverotter_1.0_HiC.tar.gz Lontra_canadensis-GSC_riverotter_1.0_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Loxodonta_africana.loxAfr3.tar.gz Loxodonta_africana.loxAfr3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Loxodonta_africana-Loxafr3.0_HiC.tar.gz Loxodonta_africana-Loxafr3.0_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Lutra_lutra-mLutLut1_HiC.tar.gz Lutra_lutra-mLutLut1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Lycaon_pictus-sis2-181106_HiC-DNAZoo.tar.gz Lycaon_pictus-sis2-181106_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Macaca_fuscata-Macaca_fuscata_HiC.tar.gz Macaca_fuscata-Macaca_fuscata_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Macaca_mulatta.MMUL_1.tar.gz Macaca_mulatta.MMUL_1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Macaca_mulatta-Mmul_10.tar.gz Macaca_mulatta-Mmul_10
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Macroglossus_sobrinus-MacSob_v1_BIUU.tar.gz Macroglossus_sobrinus-MacSob_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Macropus_eugenii.tar.gz Macropus_eugenii
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Macropus_eugenii-me-1k-DNAZoo.tar.gz Macropus_eugenii-me-1k-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Macropus_fuliginosus-mf-2k-DNAZoo.tar.gz Macropus_fuliginosus-mf-2k-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Macropus_giganteus-mg-2k-DNAZoo.tar.gz Macropus_giganteus-mg-2k-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Macropus_rufogriseus-Macropus_rufogriseus_HiC.tar.gz Macropus_rufogriseus-Macropus_rufogriseus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Macropus_rufus-mr-2k-DNAZoo.tar.gz Macropus_rufus-mr-2k-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Macrotus_californicus-MacCal_v1_BIUU.tar.gz Macrotus_californicus-MacCal_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Martes_flavigula-mfla.min_150.pseudohap2.1_HiC.tar.gz Martes_flavigula-mfla.min_150.pseudohap2.1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Martes_foina-mfoi.min_150.pseudohap2.1_HiC.tar.gz Martes_foina-mfoi.min_150.pseudohap2.1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Martes_martes-mmar.min_150.pseudohap2.1_HiC.tar.gz Martes_martes-mmar.min_150.pseudohap2.1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Martes_zibellina-mzib.min_150.pseudohap2.1_HiC.tar.gz Martes_zibellina-mzib.min_150.pseudohap2.1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mastacomys_fuscus-Mastacomys_fuscus_wtdbg2_polished_HiC.tar.gz Mastacomys_fuscus-Mastacomys_fuscus_wtdbg2_polished_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Megaderma_lyra-ASM46534v1.tar.gz Megaderma_lyra-ASM46534v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Megaderma_lyra-MegLyr_v1_BIUU.tar.gz Megaderma_lyra-MegLyr_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Megaptera_novaeangliae-Megaptera_novaeangliae_HiC.tar.gz Megaptera_novaeangliae-Megaptera_novaeangliae_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Meriones_libycus-Meriones_libycusi_HiC.tar.gz Meriones_libycus-Meriones_libycusi_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Meriones_meridianus-Meriones_meridianus_1k.tar.gz Meriones_meridianus-Meriones_meridianus_1k
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Meriones_unguiculatus-ASM813125v1_HiC.tar.gz Meriones_unguiculatus-ASM813125v1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Meriones_unguiculatus-GCA_008131255.1_ASM813125v1_genomic_HiC.tar.gz Meriones_unguiculatus-GCA_008131255.1_ASM813125v1_genomic_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mesocricetus_auratus-golden_hamster_wtdbg2.shortReadsPolished_HiC.tar.gz Mesocricetus_auratus-golden_hamster_wtdbg2.shortReadsPolished_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mesocricetus_auratus-MesAur1.0_HiC-DNAZoo.tar.gz Mesocricetus_auratus-MesAur1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Microcebus_murinus.micMur1.tar.gz Microcebus_murinus.micMur1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Microcebus_murinus-Mmur_3.0_HiC-DNAZoo.tar.gz Microcebus_murinus-Mmur_3.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Micronycteris_hirsuta-MicHir_v1_BIUU.tar.gz Micronycteris_hirsuta-MicHir_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Microtus_agrestis-GCA_001305995.1_ASM130599v1_genomic_HiC.tar.gz Microtus_agrestis-GCA_001305995.1_ASM130599v1_genomic_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Microtus_mexicanus-Microtus_mexicanus_prelim_HiC.tar.gz Microtus_mexicanus-Microtus_mexicanus_prelim_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Microtus_montanus-Microtus_montanus_1k.tar.gz Microtus_montanus-Microtus_montanus_1k
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Microtus_oregoni-GCA_018167655.1_Mior012_genomic_prelim_HiC.tar.gz Microtus_oregoni-GCA_018167655.1_Mior012_genomic_prelim_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Miniopterus_natalensis-Mnat.v1.tar.gz Miniopterus_natalensis-Mnat.v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Miniopterus_schreibersii-MinSch_v1_BIUU.tar.gz Miniopterus_schreibersii-MinSch_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Miopithecus_talapoin-Miopithecus_talapoin_HiC.tar.gz Miopithecus_talapoin-Miopithecus_talapoin_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mirounga_angustirostris_HiC-DNAZoo.tar.gz Mirounga_angustirostris_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Molossus_molossus-mMolMol1.p.tar.gz Molossus_molossus-mMolMol1.p
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Monodelphis_domestica.tar.gz Monodelphis_domestica
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Monodelphis_domestica-MonDom5_HiC-DNAZoo.tar.gz Monodelphis_domestica-MonDom5_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mormoops_blainvillei-MorMeg_v1_BIUU.tar.gz Mormoops_blainvillei-MorMeg_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Moschus_berezovskii-ls35.final.genome_HiC-DNAZoo.tar.gz Moschus_berezovskii-ls35.final.genome_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mungos_mungo-Mungos_mungo_HiC.tar.gz Mungos_mungo-Mungos_mungo_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Muntiacus_muntjak-CMJ_HiC.tar.gz Muntiacus_muntjak-CMJ_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Muntiacus_reevesi-CIJ_HiC.tar.gz Muntiacus_reevesi-CIJ_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Murina_aurata_feae-MurFea_v1_BIUU.tar.gz Murina_aurata_feae-MurFea_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mus_shortridgei-Mus_shortridgei_1k.tar.gz Mus_shortridgei-Mus_shortridgei_1k
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mustela_erminea-Mustela_erminea_HiC.tar.gz Mustela_erminea-Mustela_erminea_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mustela_nigripes-musNig1_HiC.tar.gz Mustela_nigripes-musNig1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mustela_nivalis-Mustela_nivalis_HiC.tar.gz Mustela_nivalis-Mustela_nivalis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mustela_putorius_furo.MusPutFur1.0.tar.gz Mustela_putorius_furo.MusPutFur1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mustela_putorius_furo-MusPutFur1.0_HiC-DNAZoo.tar.gz Mustela_putorius_furo-MusPutFur1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Mustela_strigidorsa-Mustela_strigidorsa_1k.tar.gz Mustela_strigidorsa-Mustela_strigidorsa_1k
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myocastor_coypus-QM1153_Masurca.scf_HiC.tar.gz Myocastor_coypus-QM1153_Masurca.scf_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myodes_rutilus-Myodes_rutilus_HiC.tar.gz Myodes_rutilus-Myodes_rutilus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myotis_brandtii-ASM41265v1.tar.gz Myotis_brandtii-ASM41265v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myotis_davidii-ASM32734v1.tar.gz Myotis_davidii-ASM32734v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myotis_evotis-Myotis_evotis_1k.tar.gz Myotis_evotis-Myotis_evotis_1k
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myotis_lucifugus.Myoluc2.0.tar.gz Myotis_lucifugus.Myoluc2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myotis_lucifugus-Myoluc2.0_HiC.tar.gz Myotis_lucifugus-Myoluc2.0_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myotis_myotis-mMyoMyo1.p.tar.gz Myotis_myotis-mMyoMyo1.p
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myotis_septentrionalis-myse_ont_racon_pilon_HiC.tar.gz Myotis_septentrionalis-myse_ont_racon_pilon_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myotis_yumanensis-Myotis_yumanensis_HiC.tar.gz Myotis_yumanensis-Myotis_yumanensis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myrmecobius_fasciatus-Myrmecobius_fasciatus_HiC.tar.gz Myrmecobius_fasciatus-Myrmecobius_fasciatus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Myrmecophaga_tridactyla-Myrmecophaga_tridactyla_M3023_MaSuRCA_24_10_19_final_genome_scf_HiC.tar.gz Myrmecophaga_tridactyla-Myrmecophaga_tridactyla_M3023_MaSuRCA_24_10_19_final_genome_scf_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Nanger_dama_ruficolis-gazelle.1_HiC.tar.gz Nanger_dama_ruficolis-gazelle.1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Neotoma_phenax-Neotoma_phenax_HiC.tar.gz Neotoma_phenax-Neotoma_phenax_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Neotomodon_alstoni-Neotomodon_alstoni_10x_v13_HiC.tar.gz Neotomodon_alstoni-Neotomodon_alstoni_10x_v13_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Noctilio_leporinus-NocLep_v1_BIUU.tar.gz Noctilio_leporinus-NocLep_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Nomascus_leucogenys.Nleu1.0.tar.gz Nomascus_leucogenys.Nleu1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Notamacropus_irma-Notamacropus_irmai_HiC.tar.gz Notamacropus_irma-Notamacropus_irmai_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Notoryctes_typhlops-Notoryctes_typhlops_wtdbg2.shortReadsPolished_HiC.tar.gz Notoryctes_typhlops-Notoryctes_typhlops_wtdbg2.shortReadsPolished_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Nycticeius_humeralis-NycHum_v1_BIUU.tar.gz Nycticeius_humeralis-NycHum_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ochotona_princeps.pika.tar.gz Ochotona_princeps.pika
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Odobenus_rosmarus-Oros_1.0_HiC-DNAZoo.tar.gz Odobenus_rosmarus-Oros_1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Odocoileus_hemionus-Odocoileus_hemionus_HiC.tar.gz Odocoileus_hemionus-Odocoileus_hemionus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Odocoileus_virginianus-Ovir.te_1.0_HiC-DNAZoo.tar.gz Odocoileus_virginianus-Ovir.te_1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Okapia_johnstoni-ASM166083v1_HiC-DNAZoo.tar.gz Okapia_johnstoni-ASM166083v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Onychomys_leucogaster-Onychomys_leucogaster_prelim_HiC.tar.gz Onychomys_leucogaster-Onychomys_leucogaster_prelim_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Orcinus_orca-Oorc_1.1_HiC-DNAZoo.tar.gz Orcinus_orca-Oorc_1.1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ornithorhynchus_anatinus.tar.gz Ornithorhynchus_anatinus
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Orycteropus_afer-OryAfe1.0_HiC-DNAZoo.tar.gz Orycteropus_afer-OryAfe1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Oryctolagus_cuniculus.OryCun2.0.tar.gz Oryctolagus_cuniculus.OryCun2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Oryctolagus_cuniculus-OryCun2.0_HiC-DNAZoo.tar.gz Oryctolagus_cuniculus-OryCun2.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Oryx_dammah-oryx.1_HiC.tar.gz Oryx_dammah-oryx.1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Osgoodomys_banderanus-Osgoodomys_banderanus_1k.tar.gz Osgoodomys_banderanus-Osgoodomys_banderanus_1k
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Otocyon_megalotis-Otocyon_megalotis_TS305_17_09_2019_HiC.tar.gz Otocyon_megalotis-Otocyon_megalotis_TS305_17_09_2019_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Otolemur_crassicaudatus-Otolemur_crassicaudatus_HiC.tar.gz Otolemur_crassicaudatus-Otolemur_crassicaudatus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Otolemur_garnettii.OtoGar3.tar.gz Otolemur_garnettii.OtoGar3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ovis_aries.Oar_v3.1.tar.gz Ovis_aries.Oar_v3.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ovis_canadensis-GCA_004026945.1_OviCan_v1_BIUU_genomic_HiC.tar.gz Ovis_canadensis-GCA_004026945.1_OviCan_v1_BIUU_genomic_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Panthera_leo_krugeri-Panthera_leo_krugeri_HiC.tar.gz Panthera_leo_krugeri-Panthera_leo_krugeri_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Panthera_onca-Panthera_onca_HiC.tar.gz Panthera_onca-Panthera_onca_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Panthera_pardus-PanPar1.0_HiC-DNAZoo.tar.gz Panthera_pardus-PanPar1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Panthera_tigris-PanTig1.0_HiC-DNAZoo.tar.gz Panthera_tigris-PanTig1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Panthera_uncia-Panthera_uncia_HiC.tar.gz Panthera_uncia-Panthera_uncia_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf panTro3.tar.gz panTro3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf panTro4.tar.gz panTro4
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pan_troglodytes.CHIMP2.1.4.tar.gz Pan_troglodytes.CHIMP2.1.4
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Papio_anubis.PapAnu2.0.tar.gz Papio_anubis.PapAnu2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Papio_papio-Papio_papio_HiC.tar.gz Papio_papio-Papio_papio_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Peponocephala_electra-Peponocephala_electra_HiC.tar.gz Peponocephala_electra-Peponocephala_electra_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Perognathus_longimembris_pacificus-PPM_HiRise_rh_HiC.tar.gz Perognathus_longimembris_pacificus-PPM_HiRise_rh_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Peromyscus_crinitus-pecr10X_v2_HiC.tar.gz Peromyscus_crinitus-pecr10X_v2_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Peromyscus_difficilis-Peromyscus_difficilis_prelim_HiC.tar.gz Peromyscus_difficilis-Peromyscus_difficilis_prelim_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Peromyscus_eremicus-Peer1.6.0_HiC.tar.gz Peromyscus_eremicus-Peer1.6.0_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Peromyscus_eremicus-Peer2.0.0.tar.gz Peromyscus_eremicus-Peer2.0.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Peromyscus_eremicus-Peer2.0.1.tar.gz Peromyscus_eremicus-Peer2.0.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Peromyscus_maniculatus_bairdii-HU_Pman_2.1.tar.gz Peromyscus_maniculatus_bairdii-HU_Pman_2.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Peromyscus_maniculatus_bairdii-Pman_1.0.tar.gz Peromyscus_maniculatus_bairdii-Pman_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Peromyscus_nasutus-Peromyscus_nasutus_10x_v1_HiC.tar.gz Peromyscus_nasutus-Peromyscus_nasutus_10x_v1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Phalanger_gymnotis-pg-2k-DNAZoo.tar.gz Phalanger_gymnotis-pg-2k-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Phascogale_tapoatafa_wambenger-Phascogale_tapoatafa_HiC.tar.gz Phascogale_tapoatafa_wambenger-Phascogale_tapoatafa_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Phascolarctos_cinereus-phaCin_unsw_v4.1_HiC.tar.gz Phascolarctos_cinereus-phaCin_unsw_v4.1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Phataginus_tricuspis-Jaziri_pseudohap2_scaffolds_HiC.tar.gz Phataginus_tricuspis-Jaziri_pseudohap2_scaffolds_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Phoca_largha-Phoca_largha_HiC.tar.gz Phoca_largha-Phoca_largha_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Phoca_vitulina-GSC_HSeal_1.0_HiC-DNAZoo.tar.gz Phoca_vitulina-GSC_HSeal_1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Phocoena_phocoena-Phocoena_phocoena_HiC.tar.gz Phocoena_phocoena-Phocoena_phocoena_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Phyllostomus_discolor-mPhyDis1.alti.v3.tar.gz Phyllostomus_discolor-mPhyDis1.alti.v3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Phyllostomus_discolor-mPhyDis1.pri.v3.tar.gz Phyllostomus_discolor-mPhyDis1.pri.v3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Phyllostomus_discolor-MPI-CBG_DAmar_mPhyDis1.p_v1.0.tar.gz Phyllostomus_discolor-MPI-CBG_DAmar_mPhyDis1.p_v1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pipistrellus_kuhlii-mPipKuh1.p.tar.gz Pipistrellus_kuhlii-mPipKuh1.p
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pipistrellus_pipistrellus-mPipPip1.1.tar.gz Pipistrellus_pipistrellus-mPipPip1.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pipistrellus_pipistrellus-mPipPip1.1_alternate_haplotype.tar.gz Pipistrellus_pipistrellus-mPipPip1.1_alternate_haplotype
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pipistrellus_pipistrellus-PipPip_v1_BIUU.tar.gz Pipistrellus_pipistrellus-PipPip_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pithecia_pithecia-Pithecia_pithecia_HiC.tar.gz Pithecia_pithecia-Pithecia_pithecia_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pongo_abelii.PPYG2.tar.gz Pongo_abelii.PPYG2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Potorous_gilbertii-Potorous_gilbertii_HiC.tar.gz Potorous_gilbertii-Potorous_gilbertii_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Potos_flavus-Potos_flavus_HiC-DNAZoo.tar.gz Potos_flavus-Potos_flavus_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Prionailurus_bengalensis-PriBen1.0.updated_2_HiC.tar.gz Prionailurus_bengalensis-PriBen1.0.updated_2_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Prionailurus_viverrinus-Prionailurus_viverrinus_HiC.tar.gz Prionailurus_viverrinus-Prionailurus_viverrinus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Procavia_capensis-Pcap_2.0_HiC-DNAZoo.tar.gz Procavia_capensis-Pcap_2.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Procavia_capensis.proCap1.tar.gz Procavia_capensis.proCap1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Procyon_lotor-pl-1k-DNAZoo.tar.gz Procyon_lotor-pl-1k-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Propithecus_coquereli-Pcoq_1.0_HiC-DNAZoo.tar.gz Propithecus_coquereli-Pcoq_1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pseudocheirus_occidentalis-Pseudocheirus_occidentalis_HiC.tar.gz Pseudocheirus_occidentalis-Pseudocheirus_occidentalis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pseudochirops_corinnae-Pseudochirops_corinnae_HiC.tar.gz Pseudochirops_corinnae-Pseudochirops_corinnae_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pseudochirops_cupreus-Pseudochirops_cupreus_HiC.tar.gz Pseudochirops_cupreus-Pseudochirops_cupreus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pseudomys_desertor-Pseudomys_desertor_wtdbg2_polished_HiC.tar.gz Pseudomys_desertor-Pseudomys_desertor_wtdbg2_polished_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pseudomys_fumeus-Pseudomys_fumeusi_HiC.tar.gz Pseudomys_fumeus-Pseudomys_fumeusi_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pteronotus_parnellii-ASM46540v1.tar.gz Pteronotus_parnellii-ASM46540v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pteronura_brasiliensis-Pteronura_brasiliensis_HiC.tar.gz Pteronura_brasiliensis-Pteronura_brasiliensis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pteropus_alecto-ASM32557v1.tar.gz Pteropus_alecto-ASM32557v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pteropus_giganteus-Ma_sr-lr_union100.tar.gz Pteropus_giganteus-Ma_sr-lr_union100
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pteropus_giganteus-Ma_sr-lr_union100_HiC.tar.gz Pteropus_giganteus-Ma_sr-lr_union100_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pteropus_pselaphon-P_pselaphon_scaffold_01.tar.gz Pteropus_pselaphon-P_pselaphon_scaffold_01
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pteropus_rodricensis-Pteropus_rodricensis_HiC.tar.gz Pteropus_rodricensis-Pteropus_rodricensis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pteropus_rufus-Pteropus_rufus_HiC.tar.gz Pteropus_rufus-Pteropus_rufus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pteropus_vampyrus.pteVam1.tar.gz Pteropus_vampyrus.pteVam1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Pteropus_vampyrus-Pvam_2.0_HiC-DNAZoo.tar.gz Pteropus_vampyrus-Pvam_2.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Puma_concolor-PumCon1.0_HiC-DNAZoo.tar.gz Puma_concolor-PumCon1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Puma_yagouaroundi-jaguarundi_pseudohap2.1.filtered_HiC.tar.gz Puma_yagouaroundi-jaguarundi_pseudohap2.1.filtered_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rangifer_tarandus-RanTarSib_v1_BIUU_HiC.tar.gz Rangifer_tarandus-RanTarSib_v1_BIUU_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rattus_norvegicus.Rnor_6.0.tar.gz Rattus_norvegicus.Rnor_6.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf rheMac2.tar.gz rheMac2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rhinoceros_unicornis-Rhinoceros_unicornis_HiC.tar.gz Rhinoceros_unicornis-Rhinoceros_unicornis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rhinolophus_ferrumequinum-ASM46549v1.tar.gz Rhinolophus_ferrumequinum-ASM46549v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rhinolophus_ferrumequinum-mRhiFer1.p.tar.gz Rhinolophus_ferrumequinum-mRhiFer1.p
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rhinolophus_ferrumequinum-mRhiFer1_v1.h.tar.gz Rhinolophus_ferrumequinum-mRhiFer1_v1.h
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rhinolophus_ferrumequinum-mRhiFer1_v1.p.tar.gz Rhinolophus_ferrumequinum-mRhiFer1_v1.p
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rhinolophus_ferrumequinum-RhiFer_v1_BIUU.tar.gz Rhinolophus_ferrumequinum-RhiFer_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rhinolophus_sinicus-ASM188883v1.tar.gz Rhinolophus_sinicus-ASM188883v1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf rn5.tar.gz rn5
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf rn6.tar.gz rn6
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Romerolagus_diazi-Romerolagus_diazi_prelim_HiC.tar.gz Romerolagus_diazi-Romerolagus_diazi_prelim_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rousettus_aegyptiacus-mRouAeg1.p.tar.gz Rousettus_aegyptiacus-mRouAeg1.p
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rousettus_aegyptiacus-Raegyp2.0.tar.gz Rousettus_aegyptiacus-Raegyp2.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rousettus_aegyptiacus-rouAeg_1.0.tar.gz Rousettus_aegyptiacus-rouAeg_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rousettus_aegyptiacus-RouAeg_v1_BIUU.tar.gz Rousettus_aegyptiacus-RouAeg_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Rousettus_leschenaultii-rouLes_1.0.tar.gz Rousettus_leschenaultii-rouLes_1.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Saimiri_boliviensis-saiBolDis_HiC-DNAZoo.tar.gz Saimiri_boliviensis-saiBolDis_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sarcophilus_harrisii.DEVIL7.0.tar.gz Sarcophilus_harrisii.DEVIL7.0
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sarcophilus_harrisii-Devil_ref_v7.0_HiC.tar.gz Sarcophilus_harrisii-Devil_ref_v7.0_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sigmodon_hispidus-GCA_004025045.1_SigHis_v1_BIUU_genomic_HiC.tar.gz Sigmodon_hispidus-GCA_004025045.1_SigHis_v1_BIUU_genomic_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sminthopsis_crassicaudata-Sminthopsis_crassicaudata_HiC.tar.gz Sminthopsis_crassicaudata-Sminthopsis_crassicaudata_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sorex_araneus.COMMON_SHREW1.tar.gz Sorex_araneus.COMMON_SHREW1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Spilogale_interrupta-polished_2_HiC.tar.gz Spilogale_interrupta-polished_2_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Stenella_attenuata-Stenella_attenuata_HiC.tar.gz Stenella_attenuata-Stenella_attenuata_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Stenella_clymene-Stenella_clymene_HiC.tar.gz Stenella_clymene-Stenella_clymene_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Stenella_frontalis-Stenella_frontalis_HiC.tar.gz Stenella_frontalis-Stenella_frontalis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Stenella_longirostris_orientalis-Stenella_longirostris_orientalis_HiC.tar.gz Stenella_longirostris_orientalis-Stenella_longirostris_orientalis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Steno_bredanensis-Steno_bredanensis_HiC.tar.gz Steno_bredanensis-Steno_bredanensis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sturnira_hondurensis-WHU_Shon_v2.tar.gz Sturnira_hondurensis-WHU_Shon_v2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Suricata_suricatta-meerkat_22Aug2017_6uvM2_HiC-DNAZoo.tar.gz Suricata_suricatta-meerkat_22Aug2017_6uvM2_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf susScr2.tar.gz susScr2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sus_scrofa-Sscrofa10.2_susScr3.tar.gz Sus_scrofa-Sscrofa10.2_susScr3
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sus_scrofa-Sscrofa11.1.tar.gz Sus_scrofa-Sscrofa11.1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sylvilagus_bachmani-Sylvilagus_bachmani_HiC.tar.gz Sylvilagus_bachmani-Sylvilagus_bachmani_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sylvilagus_transitionalis-Sylvilagus_transitionalis_HiC.tar.gz Sylvilagus_transitionalis-Sylvilagus_transitionalis_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sylvilagus_transitionalis-Sylvilagus_transitionalis_HiC_2.tar.gz Sylvilagus_transitionalis-Sylvilagus_transitionalis_HiC_2
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Sylvilagus_transitionalis-Sylvilagus_transitionalis_prelim_HiC.tar.gz Sylvilagus_transitionalis-Sylvilagus_transitionalis_prelim_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Symphalangus_syndactylus-Symphalangus_syndactylus_HiC.tar.gz Symphalangus_syndactylus-Symphalangus_syndactylus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tadarida_brasiliensis-TadBra_v1_BIUU.tar.gz Tadarida_brasiliensis-TadBra_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tamandua_tetradactyla-Tamandua_tetradactyla_M3075_MaSuRCA_1_07_2020_final_genome_scf_HiC.tar.gz Tamandua_tetradactyla-Tamandua_tetradactyla_M3075_MaSuRCA_1_07_2020_final_genome_scf_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tapirella_bairdii-Tapirella_bairdii_HiC.tar.gz Tapirella_bairdii-Tapirella_bairdii_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tapirus_indicus-Tapirus_indicus_HiC.tar.gz Tapirus_indicus-Tapirus_indicus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tapirus_terrestris-Tapirus_terrestris_HiC.tar.gz Tapirus_terrestris-Tapirus_terrestris_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tapirus_terrestris-TapTer_v1_BIUU.tar.gz Tapirus_terrestris-TapTer_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tarsius_syrichta.tarSyr1.tar.gz Tarsius_syrichta.tarSyr1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Theropithecus_gelada-Theropithecus_gelada_HiC.tar.gz Theropithecus_gelada-Theropithecus_gelada_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tonatia_saurophila-TonSau_v1_BIUU.tar.gz Tonatia_saurophila-TonSau_v1_BIUU
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Trachops_cirrhosus-Trachops_cirrhosus_HiC.tar.gz Trachops_cirrhosus-Trachops_cirrhosus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Trachypithecus_obscurus-Trachypithecus_obscurus_prelim_HiC.tar.gz Trachypithecus_obscurus-Trachypithecus_obscurus_prelim_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tragelaphus_eurycerus_isaaci-barney_pseudo2.1_HiC.tar.gz Tragelaphus_eurycerus_isaaci-barney_pseudo2.1_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tremarctos_ornatus-Tremarctos_ornatus_HiC.tar.gz Tremarctos_ornatus-Tremarctos_ornatus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Trichechus_manatus-TriManLat1.0_HiC-DNAZoo.tar.gz Trichechus_manatus-TriManLat1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tupaia_belangeri.TREESHREW.tar.gz Tupaia_belangeri.TREESHREW
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tursiops_aduncus-ASM322739v1_HiC-DNAZoo.tar.gz Tursiops_aduncus-ASM322739v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tursiops_truncatus-NIST_Tur_tru_v1_HiC-DNAZoo.tar.gz Tursiops_truncatus-NIST_Tur_tru_v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Tursiops_truncatus.turTru1.tar.gz Tursiops_truncatus.turTru1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Urocyon_littoralis_catalinae-Urocyon_littoralis_catalinaei_HiC.tar.gz Urocyon_littoralis_catalinae-Urocyon_littoralis_catalinaei_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Uromys_caudimaculatus-Uromys_caudimaculatus_HiC.tar.gz Uromys_caudimaculatus-Uromys_caudimaculatus_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ursus_americanus-ASM334442v1_HiC-DNAZoo.tar.gz Ursus_americanus-ASM334442v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ursus_arctos-ASM358476v1_HiC-DNAZoo.tar.gz Ursus_arctos-ASM358476v1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Ursus_maritimus-UrsMar_1.0_HiC-DNAZoo.tar.gz Ursus_maritimus-UrsMar_1.0_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Urva_auropunctata-Urva_auropunctata_HiC.tar.gz Urva_auropunctata-Urva_auropunctata_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Varecia_variegata-Varecia_variegata_HiC.tar.gz Varecia_variegata-Varecia_variegata_HiC
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Vicugna_pacos.vicPac1.tar.gz Vicugna_pacos.vicPac1
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Vicugna_pacos-Vicugna_pacos-2.0.1_HiC-DNAZoo.tar.gz Vicugna_pacos-Vicugna_pacos-2.0.1_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Vombatus_ursinus-vu-2k-DNAZoo.tar.gz Vombatus_ursinus-vu-2k-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Vulpes_vulpes-VulVul2.2_HiC-DNAZoo.tar.gz Vulpes_vulpes-VulVul2.2_HiC-DNAZoo
cd /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mammals; tar -czvf Xerus_rutilus-Xerus_rutilus_HiC.tar.gz Xerus_rutilus-Xerus_rutilus_HiC