cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD-L099-Georgi_Fix_196_EM-seq/*.gz datasets-PBAT-NOME_dSMF/BD-L099-Georgi_Fix_196_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD-L100-Georgi_Fix_197_EM-seq/*.gz datasets-PBAT-NOME_dSMF/BD-L100-Georgi_Fix_197_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD-L101-Georgi_Fix_198_EM-seq/*.gz datasets-PBAT-NOME_dSMF/BD-L101-Georgi_Fix_198_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD-L102-Georgi_Fix_199_EM-seq/*.gz datasets-PBAT-NOME_dSMF/BD-L102-Georgi_Fix_199_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD-L103-Georgi_Fix_200_EM-seq/*.gz datasets-PBAT-NOME_dSMF/BD-L103-Georgi_Fix_200_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD-L150_K562_ChIPSMF_Input/*.gz datasets-PBAT-NOME_dSMF/BD-L150_K562_ChIPSMF_Input
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD-L151_K562_ChIPSMF_H3K4me1/*.gz datasets-PBAT-NOME_dSMF/BD-L151_K562_ChIPSMF_H3K4me1
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD-L152_K562_ChIPSMF_H3K27ac/*.gz datasets-PBAT-NOME_dSMF/BD-L152_K562_ChIPSMF_H3K27ac
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD-L153_K562_ChIPSMF_H3K36me3/*.gz datasets-PBAT-NOME_dSMF/BD-L153_K562_ChIPSMF_H3K36me3
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD-L154_K562_ChIPSMF_H3K27me3/*.gz datasets-PBAT-NOME_dSMF/BD-L154_K562_ChIPSMF_H3K27me3
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD-L155_K562_ChIPSMF_H3K9me3/*.gz datasets-PBAT-NOME_dSMF/BD-L155_K562_ChIPSMF_H3K9me3
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L219-Pol2_Native_methylated_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L219-Pol2_Native_methylated_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L220-Pol2_4H8_Native_methylated_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L220-Pol2_4H8_Native_methylated_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L221-Pol2_methylated_fix_after_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L221-Pol2_methylated_fix_after_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L222-Pol2_4H8_methylated_fix_after_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L222-Pol2_4H8_methylated_fix_after_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L223-DRB_Pol2_Native_methylated_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L223-DRB_Pol2_Native_methylated_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L224-DRB_Pol2_4H8_Native_methylated_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L224-DRB_Pol2_4H8_Native_methylated_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L225-DRB_Pol2_methylated_fix_after_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L225-DRB_Pol2_methylated_fix_after_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L226-DRB_Pol2_4H8_methylated_fix_after_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L226-DRB_Pol2_4H8_methylated_fix_after_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L227-H32K7ac_Native_methylated_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L227-H32K7ac_Native_methylated_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L228-H32K7ac_methylated_fix_after_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L228-H32K7ac_methylated_fix_after_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L229-Input_Native_methylated_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L229-Input_Native_methylated_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L230-Input_Native_DRB_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L230-Input_Native_DRB_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L231-Input_methylated_fix_after_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L231-Input_methylated_fix_after_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L232-Input_methylated_DRB_ChIP-SMF/*.gz datasets-PBAT-NOME_dSMF/BD_L232-Input_methylated_DRB_ChIP-SMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L233-Pol2_unmethylated_fix_after-ChIP-seq/*.gz datasets-PBAT-NOME_dSMF/BD_L233-Pol2_unmethylated_fix_after-ChIP-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L234-H32K7ac_unmethylated_fix_after-ChIP-seq/*.gz datasets-PBAT-NOME_dSMF/BD_L234-H32K7ac_unmethylated_fix_after-ChIP-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/BD_L235-Input_unmethylated-ChIP-seq/*.gz datasets-PBAT-NOME_dSMF/BD_L235-Input_unmethylated-ChIP-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L101-dSMF-S_cerevisiae-200U/*.gz datasets-PBAT-NOME_dSMF/L101-dSMF-S_cerevisiae-200U
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L102-dSMF-S_cerevisiae-100U/*.gz datasets-PBAT-NOME_dSMF/L102-dSMF-S_cerevisiae-100U
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L103-dSMF-S_cerevisiae-50U/*.gz datasets-PBAT-NOME_dSMF/L103-dSMF-S_cerevisiae-50U
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L104-dSMF-S_cerevisiae-10U/*.gz datasets-PBAT-NOME_dSMF/L104-dSMF-S_cerevisiae-10U
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L105-dSMF-S_cerevisiae-2U/*.gz datasets-PBAT-NOME_dSMF/L105-dSMF-S_cerevisiae-2U
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L106-dSMF-S_cerevisiae-0U/*.gz datasets-PBAT-NOME_dSMF/L106-dSMF-S_cerevisiae-0U
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L114-Symbiodinium_minutum_SSb01-WGBS/*.gz datasets-PBAT-NOME_dSMF/L114-Symbiodinium_minutum_SSb01-WGBS
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1231-MS63-0nM-A-dSMF/*.gz datasets-PBAT-NOME_dSMF/L1231-MS63-0nM-A-dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1232-MS63-0nM-B-dSMF/*.gz datasets-PBAT-NOME_dSMF/L1232-MS63-0nM-B-dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1233-MS63-10nM-C-dSMF/*.gz datasets-PBAT-NOME_dSMF/L1233-MS63-10nM-C-dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1234-MS63-10nM-D-dSMF/*.gz datasets-PBAT-NOME_dSMF/L1234-MS63-10nM-D-dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1235-MS63-30nM-E-dSMF/*.gz datasets-PBAT-NOME_dSMF/L1235-MS63-30nM-E-dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1236-MS63-30nM-F-dSMF/*.gz datasets-PBAT-NOME_dSMF/L1236-MS63-30nM-F-dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L131-Human_gDNA_untreated/*.gz datasets-PBAT-NOME_dSMF/L131-Human_gDNA_untreated
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L132-S2_cells_CpC_CpG_N6mA/*.gz datasets-PBAT-NOME_dSMF/L132-S2_cells_CpC_CpG_N6mA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L133-Human_gDNA_CpG_GpC/*.gz datasets-PBAT-NOME_dSMF/L133-Human_gDNA_CpG_GpC
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L134-S2_cells_untreated/*.gz datasets-PBAT-NOME_dSMF/L134-S2_cells_untreated
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L135-S_cerevisiae_SMAC_CpC_CpG_N6mA/*.gz datasets-PBAT-NOME_dSMF/L135-S_cerevisiae_SMAC_CpC_CpG_N6mA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L136-Saccharomyces_mikate_dSMF_CpC_CpG/*.gz datasets-PBAT-NOME_dSMF/L136-Saccharomyces_mikate_dSMF_CpC_CpG
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L137-Saccharomyces_paradoxus_NOME-seq_100U/*.gz datasets-PBAT-NOME_dSMF/L137-Saccharomyces_paradoxus_NOME-seq_100U
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L138-Saccharomyces_paradoxus_NOME-seq_75U/*.gz datasets-PBAT-NOME_dSMF/L138-Saccharomyces_paradoxus_NOME-seq_75U
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L139-Saccharomyces_paradoxus_NOME-seq_25U/*.gz datasets-PBAT-NOME_dSMF/L139-Saccharomyces_paradoxus_NOME-seq_25U
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L140-Saccharomyces_paradoxus_NOME-seq_4U/*.gz datasets-PBAT-NOME_dSMF/L140-Saccharomyces_paradoxus_NOME-seq_4U
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1631-Amphidinium_carteri_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L1631-Amphidinium_carteri_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1632-Nannochloropsis_occulata_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L1632-Nannochloropsis_occulata_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1633-Control_MS47_dSMF_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L1633-Control_MS47_dSMF_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1634-DVNP_GM05_dSMF_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L1634-DVNP_GM05_dSMF_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1635-DVNP_GM06_dSMF_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L1635-DVNP_GM06_dSMF_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1636-Bigelowiella_natans_SMAC_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L1636-Bigelowiella_natans_SMAC_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1637-Guillardia_theta_SMAC_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L1637-Guillardia_theta_SMAC_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1638-Chromera_velia_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L1638-Chromera_velia_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1639-Polarella_glacialis_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L1639-Polarella_glacialis_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1640-TaqI_rhADA/*.gz datasets-PBAT-NOME_dSMF/L1640-TaqI_rhADA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1641-EcoGII_rhADA/*.gz datasets-PBAT-NOME_dSMF/L1641-EcoGII_rhADA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1642-Dam_rhADA/*.gz datasets-PBAT-NOME_dSMF/L1642-Dam_rhADA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1645-Exaiptasia_pallida_H3K27me3__L1653-TaqI_rhADA_NaOH/*.gz datasets-PBAT-NOME_dSMF/L1645-Exaiptasia_pallida_H3K27me3__L1653-TaqI_rhADA_NaOH
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1652-TaqI_rhADA_98C/*.gz datasets-PBAT-NOME_dSMF/L1652-TaqI_rhADA_98C
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1692-K562_Hi-CEM_test_on_beads/*.gz datasets-PBAT-NOME_dSMF/L1692-K562_Hi-CEM_test_on_beads
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1693-Lambda_Hi-CEM_control_test/*.gz datasets-PBAT-NOME_dSMF/L1693-Lambda_Hi-CEM_control_test
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1708-Polarella_glacialis_CCMP2088_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L1708-Polarella_glacialis_CCMP2088_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1709-Haloferax_volcanii_exponential_NOMe/*.gz datasets-PBAT-NOME_dSMF/L1709-Haloferax_volcanii_exponential_NOMe
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1710-Haloferax_volcanii_exponential_dSMF/*.gz datasets-PBAT-NOME_dSMF/L1710-Haloferax_volcanii_exponential_dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1711-Haloferax_volcanii_stationary_NOMe_Rep1/*.gz datasets-PBAT-NOME_dSMF/L1711-Haloferax_volcanii_stationary_NOMe_Rep1
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1712-Haloferax_volcanii_stationary_NOMe_Rep2/*.gz datasets-PBAT-NOME_dSMF/L1712-Haloferax_volcanii_stationary_NOMe_Rep2
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1713-Haloferax_volcanii_standing_NOMe_Rep1/*.gz datasets-PBAT-NOME_dSMF/L1713-Haloferax_volcanii_standing_NOMe_Rep1
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1714-Haloferax_volcanii_standing_NOMe_Rep2/*.gz datasets-PBAT-NOME_dSMF/L1714-Haloferax_volcanii_standing_NOMe_Rep2
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1778-S2_dSMF/*.gz datasets-PBAT-NOME_dSMF/L1778-S2_dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1779-S2_dSMF_1pFA/*.gz datasets-PBAT-NOME_dSMF/L1779-S2_dSMF_1pFA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1780-K562_2500ng/*.gz datasets-PBAT-NOME_dSMF/L1780-K562_2500ng
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1781-K562_500ng/*.gz datasets-PBAT-NOME_dSMF/L1781-K562_500ng
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1782-K562_100ng/*.gz datasets-PBAT-NOME_dSMF/L1782-K562_100ng
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1783-K562_25ng/*.gz datasets-PBAT-NOME_dSMF/L1783-K562_25ng
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L180-dSMF/*.gz datasets-PBAT-NOME_dSMF/L180-dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1868-K562-Hi-CEM-post_TET_capture/*.gz datasets-PBAT-NOME_dSMF/L1868-K562-Hi-CEM-post_TET_capture
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1869-K562-Hi-CEM-on-beads/*.gz datasets-PBAT-NOME_dSMF/L1869-K562-Hi-CEM-on-beads
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1870-S2_Hi-SMF-post_TET_capture/*.gz datasets-PBAT-NOME_dSMF/L1870-S2_Hi-SMF-post_TET_capture
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1871-S2_Hi-SMF-on-beads/*.gz datasets-PBAT-NOME_dSMF/L1871-S2_Hi-SMF-on-beads
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1938-unmethylated_dsDNA/*.gz datasets-PBAT-NOME_dSMF/L1938-unmethylated_dsDNA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1939-TaqI_dsDNA/*.gz datasets-PBAT-NOME_dSMF/L1939-TaqI_dsDNA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1940-EcoGII_dsDNA/*.gz datasets-PBAT-NOME_dSMF/L1940-EcoGII_dsDNA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1941-unmethylated_ssDNA/*.gz datasets-PBAT-NOME_dSMF/L1941-unmethylated_ssDNA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1942-TaqI_sDNA/*.gz datasets-PBAT-NOME_dSMF/L1942-TaqI_sDNA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1943-EcoGII_ssDNA/*.gz datasets-PBAT-NOME_dSMF/L1943-EcoGII_ssDNA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1944-unmethylated_ssDNA_denatured_in_NaNO2/*.gz datasets-PBAT-NOME_dSMF/L1944-unmethylated_ssDNA_denatured_in_NaNO2
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1945-TaqI_sDNA_denatured_in_NaNO2/*.gz datasets-PBAT-NOME_dSMF/L1945-TaqI_sDNA_denatured_in_NaNO2
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1946-EcoGII_ssDNA_denatured_in_NaNO2/*.gz datasets-PBAT-NOME_dSMF/L1946-EcoGII_ssDNA_denatured_in_NaNO2
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L196-S2-dSMF-rep1/*.gz datasets-PBAT-NOME_dSMF/L196-S2-dSMF-rep1
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L197-S2-dSMF-rep2/*.gz datasets-PBAT-NOME_dSMF/L197-S2-dSMF-rep2
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1974-1p_Ac/*.gz datasets-PBAT-NOME_dSMF/L1974-1p_Ac
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1975-2_5p_Ac/*.gz datasets-PBAT-NOME_dSMF/L1975-2_5p_Ac
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1976-5p_Ac/*.gz datasets-PBAT-NOME_dSMF/L1976-5p_Ac
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1977-10p_Ac/*.gz datasets-PBAT-NOME_dSMF/L1977-10p_Ac
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1978-Polarella_glacialis_CCMP2088_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L1978-Polarella_glacialis_CCMP2088_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L198-dSMF/*.gz datasets-PBAT-NOME_dSMF/L198-dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1997-King_eccDNA_NOME_rep1/*.gz datasets-PBAT-NOME_dSMF/L1997-King_eccDNA_NOME_rep1
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1998-King_eccDNA_NOME_rep2/*.gz datasets-PBAT-NOME_dSMF/L1998-King_eccDNA_NOME_rep2
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L1999-King_eccDNA_gDNA/*.gz datasets-PBAT-NOME_dSMF/L1999-King_eccDNA_gDNA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2000-King_eccDNA_NOME_rep1/*.gz datasets-PBAT-NOME_dSMF/L2000-King_eccDNA_NOME_rep1
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2001-King_eccDNA_NOME_rep2/*.gz datasets-PBAT-NOME_dSMF/L2001-King_eccDNA_NOME_rep2
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2002-King_eccDNA_gDNA/*.gz datasets-PBAT-NOME_dSMF/L2002-King_eccDNA_gDNA
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2003-Polarella_glacialis_Hi-C_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L2003-Polarella_glacialis_Hi-C_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2004-Polarella_glacialis_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L2004-Polarella_glacialis_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2717-full_glyoxal_PNK/*.gz datasets-PBAT-NOME_dSMF/L2717-full_glyoxal_PNK
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2718-full_glyoxal_noPNK/*.gz datasets-PBAT-NOME_dSMF/L2718-full_glyoxal_noPNK
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2719-1_6_glyoxal_PNK/*.gz datasets-PBAT-NOME_dSMF/L2719-1_6_glyoxal_PNK
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2720-1_6_glyoxal_noPNK/*.gz datasets-PBAT-NOME_dSMF/L2720-1_6_glyoxal_noPNK
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2737-No_conversion/*.gz datasets-PBAT-NOME_dSMF/L2737-No_conversion
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2738-full_treatment/*.gz datasets-PBAT-NOME_dSMF/L2738-full_treatment
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2739-one_tenth/*.gz datasets-PBAT-NOME_dSMF/L2739-one_tenth
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2740-SMAC_GM12878_MluCI_digest_high/*.gz datasets-PBAT-NOME_dSMF/L2740-SMAC_GM12878_MluCI_digest_high
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2741-SMAC_146_I_MluCI_digest_high/*.gz datasets-PBAT-NOME_dSMF/L2741-SMAC_146_I_MluCI_digest_high
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2742-SMAC_GM12878_MluCI_digest_low/*.gz datasets-PBAT-NOME_dSMF/L2742-SMAC_GM12878_MluCI_digest_low
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L2743-SMAC_146_I_MluCI_digest_low/*.gz datasets-PBAT-NOME_dSMF/L2743-SMAC_146_I_MluCI_digest_low
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L289-30fL_B_dSMF/*.gz datasets-PBAT-NOME_dSMF/L289-30fL_B_dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L290-30fL_A_dSMF/*.gz datasets-PBAT-NOME_dSMF/L290-30fL_A_dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L291-60fL_D_dSMF/*.gz datasets-PBAT-NOME_dSMF/L291-60fL_D_dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L292-90fL_E_dSMF/*.gz datasets-PBAT-NOME_dSMF/L292-90fL_E_dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L293-90fL_F_dSMF/*.gz datasets-PBAT-NOME_dSMF/L293-90fL_F_dSMF
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L520-WGBS-27C_Rep1/*.gz datasets-PBAT-NOME_dSMF/L520-WGBS-27C_Rep1
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L521-WGBS-27C_Rep2/*.gz datasets-PBAT-NOME_dSMF/L521-WGBS-27C_Rep2
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L522-WGBS-34C_Rep1/*.gz datasets-PBAT-NOME_dSMF/L522-WGBS-34C_Rep1
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L523-WGBS-34C_Rep2/*.gz datasets-PBAT-NOME_dSMF/L523-WGBS-34C_Rep2
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L575-GM12878_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L575-GM12878_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L576-SSBO1_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L576-SSBO1_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L577-Haloferax_volcani_stationary_EM-seq/*.gz datasets-PBAT-NOME_dSMF/L577-Haloferax_volcani_stationary_EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L578-d0-1-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L578-d0-1-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L579-d0-2-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L579-d0-2-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L580-d2-1-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L580-d2-1-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L581-d2-2-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L581-d2-2-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L582-d5-1-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L582-d5-1-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L583-d5-2-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L583-d5-2-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L585-34C_d0-1-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L585-34C_d0-1-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L586-34C_d0-2-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L586-34C_d0-2-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L587-34C_d0-3-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L587-34C_d0-3-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L588-34C_d2-1-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L588-34C_d2-1-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L589-34C_d2-2-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L589-34C_d2-2-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L590-34C_d2-3-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L590-34C_d2-3-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L591-34C_d5-1-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L591-34C_d5-1-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L592-34C_d5-2-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L592-34C_d5-2-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L593-34C_d5-3-EM-seq/*.gz datasets-PBAT-NOME_dSMF/L593-34C_d5-3-EM-seq
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L616-34C_d0-1_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L616-34C_d0-1_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L617-34C_d0-2_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L617-34C_d0-2_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L618-34C_d0-3_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L618-34C_d0-3_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L619-34C_d2-1_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L619-34C_d2-1_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L620-34C_d2-2_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L620-34C_d2-2_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L621-34C_d2-3_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L621-34C_d2-3_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L622-34C_d5-1_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L622-34C_d5-1_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L623-34C_d5-2_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L623-34C_d5-2_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L624-34C_d5-3_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L624-34C_d5-3_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L625-stationary_2019_03_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L625-stationary_2019_03_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L626-42C_2019_07_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L626-42C_2019_07_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L627-stationary_2019_07_on_bead_PCR/*.gz datasets-PBAT-NOME_dSMF/L627-stationary_2019_07_on_bead_PCR
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L77-Saccharomyces_paradoxus-GC_only/*.gz datasets-PBAT-NOME_dSMF/L77-Saccharomyces_paradoxus-GC_only
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L78-Saccharomyces_paradoxus-GC+CG/*.gz datasets-PBAT-NOME_dSMF/L78-Saccharomyces_paradoxus-GC+CG
cp /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-PBAT-NOME_dSMF/L79-Saccharomyces_paradoxus-CG_only/*.gz datasets-PBAT-NOME_dSMF/L79-Saccharomyces_paradoxus-CG_only