#Protein	Length	Domain	Domain_description	score	bias	c-Evalue	i-Evalue	hmmfrom	hmmto	alifrom	alito	envfrom 	envto	acc
gi|15027630|ref|NP_149364.1|	100	DUF4153	Domain	9.3	14.2	4.4e-05	0.8	12	88	20	98	13	100	0.82
gi|15027633|ref|NP_149367.1|	276	Ribosomal_S13	Ribosomal	34.9	0.0	9.3e-13	1.7e-08	86	126	70	110	15	112	0.79
gi|15027635|ref|NP_149369.1|	98	Ribosomal_S19	Ribosomal	45.1	1.3	3.8e-16	6.9e-12	2	79	4	83	3	85	0.91
gi|15027636|ref|NP_149370.1|	262	Ribosomal_L2_C	Ribosomal	92.9	0.0	1.9e-30	1.7e-26	3	126	133	255	132	255	0.94
gi|15027636|ref|NP_149370.1|	262	Ribosomal_L2	Ribosomal	24.1	0.5	2.8e-09	2.5e-05	1	73	41	113	41	117	0.94
gi|15027638|ref|NP_149372.1|	162	Oxidored_q6	NADH	68.9	0.0	1.9e-23	3.5e-19	4	130	32	139	30	140	0.86
gi|15027639|ref|NP_149373.1|	133	Ribosom_S12_S23	Ribosomal	87.1	0.8	6.5e-29	5.8e-25	3	109	12	116	10	121	0.87
gi|15027639|ref|NP_149373.1|	133	Ribosomal_S12	Ribosomal	14.4	0.0	5.4e-06	0.049	22	83	35	94	28	97	0.72
gi|15027640|ref|NP_149374.1|	178	Proton_antipo_M	Proton-conducting	23.6	7.2	2.9e-09	2.6e-05	202	290	22	108	6	111	0.69
gi|15027640|ref|NP_149374.1|	178	DUF1003	Protein	16.0	3.0	1.1e-06	0.01	5	48	27	73	25	80	0.88
gi|15027640|ref|NP_149374.1|	178	DUF1003	Protein	-2.2	0.9	0.51	4.6e+03	32	32	127	127	96	168	0.55
gi|15027641|ref|NP_149375.1|	442	Complex1_49kDa	Respiratory-chain	285.3	0.0	4.2e-89	3.8e-85	1	271	140	442	140	442	0.95
gi|15027641|ref|NP_149375.1|	442	RIIa	Regulatory	11.1	0.1	2.7e-05	0.24	20	35	190	205	190	207	0.93
gi|15027644|ref|NP_149378.1|	330	Ribosomal_S3_C	Ribosomal	13.9	0.0	3.3e-06	0.06	26	83	268	327	244	327	0.81
gi|15027646|ref|NP_149380.1|	59	NADHdh	NADH	34.4	3.7	7.8e-13	1.4e-08	250	297	3	50	1	52	0.94
gi|15027647|ref|NP_149381.1|	76	ATP-synt_C	ATP	24.4	0.6	3e-09	2.7e-05	7	50	15	62	10	74	0.88
gi|15027647|ref|NP_149381.1|	76	DUF3082	Protein	3.3	2.4	0.011	95	49	73	6	29	3	36	0.80
gi|15027647|ref|NP_149381.1|	76	DUF3082	Protein	14.0	0.7	5.1e-06	0.046	49	76	47	74	42	76	0.88
gi|15027651|ref|NP_149383.1|	360	Proton_antipo_M	Proton-conducting	25.0	29.4	5.5e-10	9.8e-06	38	191	196	357	144	359	0.86
gi|15027652|ref|NP_149386.1|	143	Ribosomal_L16	Ribosomal	40.1	0.1	1.8e-14	3.3e-10	7	114	9	120	3	138	0.77
gi|15027653|ref|NP_149387.1|	518	Cytochrom_C_asm	Cytochrome	27.0	27.2	1.9e-10	3.5e-06	10	198	33	235	5	252	0.67
gi|15027653|ref|NP_149387.1|	518	Cytochrom_C_asm	Cytochrome	-14.8	20.0	1	1.8e+04	7	51	329	375	257	418	0.67
gi|15027653|ref|NP_149387.1|	518	Cytochrom_C_asm	Cytochrome	-2.3	0.9	0.17	3e+03	8	51	393	436	388	466	0.65
gi|15027653|ref|NP_149387.1|	518	Cytochrom_C_asm	Cytochrome	-3.7	0.2	0.48	8.6e+03	6	22	495	511	490	515	0.49
gi|15027654|ref|NP_149388.1|	238	Pectate_lyase_3	Pectate	12.0	0.5	7.9e-06	0.14	116	188	14	89	3	112	0.72
gi|15027654|ref|NP_149388.1|	238	Pectate_lyase_3	Pectate	-0.1	0.2	0.04	7.1e+02	129	163	132	166	89	205	0.57
gi|15027655|ref|NP_149389.1|	121	Oxidored_q4	NADH-ubiquinone/plastoquinone	0.1	0.1	0.051	9.1e+02	72	94	13	35	4	37	0.58
gi|15027655|ref|NP_149389.1|	121	Oxidored_q4	NADH-ubiquinone/plastoquinone	60.4	15.6	8.3e-21	1.5e-16	14	99	33	118	13	118	0.91
gi|15027658|ref|NP_149392.1|	198	Complex1_30kDa	Respiratory-chain	57.3	0.0	1.3e-19	2.3e-15	35	121	78	176	36	177	0.77
gi|15027659|ref|NP_149393.1|	198	Complex1_30kDa	Respiratory-chain	57.0	0.0	1.5e-19	2.8e-15	35	121	78	176	36	177	0.77
gi|15027661|ref|NP_149395.1|	426	Cytochrome_B	Cytochrome	62.4	11.5	8.3e-21	4.9e-17	15	187	33	205	20	207	0.87
gi|15027661|ref|NP_149395.1|	426	Cytochrome_B	Cytochrome	-2.5	0.0	0.66	3.9e+03	17	31	232	246	228	264	0.65
gi|15027661|ref|NP_149395.1|	426	Cytochrom_B_N_2	Cytochrome	51.2	5.1	2.4e-17	1.4e-13	2	165	90	252	89	255	0.86
gi|15027661|ref|NP_149395.1|	426	Cytochrom_B_C	Cytochrome	-0.7	0.2	0.29	1.7e+03	65	85	120	140	87	157	0.51
gi|15027661|ref|NP_149395.1|	426	Cytochrom_B_C	Cytochrome	-3.2	0.2	1.8	1e+04	65	77	235	247	227	250	0.59
gi|15027661|ref|NP_149395.1|	426	Cytochrom_B_C	Cytochrome	18.1	3.7	4.2e-07	0.0025	10	82	275	347	273	369	0.79
gi|15027661|ref|NP_149395.1|	426	Cytochrom_B_C	Cytochrome	0.6	0.2	0.12	6.9e+02	57	80	348	370	331	397	0.74
gi|15027662|ref|NP_149396.1|	750	Proton_antipo_M	Proton-conducting	-1.5	4.2	0.13	1.1e+03	42	104	37	106	27	110	0.69
gi|15027662|ref|NP_149396.1|	750	Proton_antipo_M	Proton-conducting	-5.6	4.9	2	1.8e+04	47	70	200	223	177	275	0.54
gi|15027662|ref|NP_149396.1|	750	Proton_antipo_M	Proton-conducting	220.6	25.2	2.7e-69	2.4e-65	1	286	302	592	302	600	0.93
gi|15027662|ref|NP_149396.1|	750	Proton_antipo_N	NADH-Ubiquinone	3.3	1.1	0.0096	86	12	43	76	107	68	111	0.89
gi|15027662|ref|NP_149396.1|	750	Proton_antipo_N	NADH-Ubiquinone	23.0	4.4	6.7e-09	6e-05	3	57	234	289	232	290	0.89
gi|15027662|ref|NP_149396.1|	750	Proton_antipo_N	NADH-Ubiquinone	-1.9	0.2	0.41	3.7e+03	15	33	339	357	326	361	0.69
gi|15027662|ref|NP_149396.1|	750	Proton_antipo_N	NADH-Ubiquinone	-1.5	0.3	0.32	2.8e+03	19	42	479	502	474	510	0.71
gi|15027662|ref|NP_149396.1|	750	Proton_antipo_N	NADH-Ubiquinone	-1.1	0.3	0.23	2.1e+03	18	31	644	657	639	663	0.76
gi|15027663|ref|NP_149397.1|	604	COX2	Cytochrome	7.6	0.1	0.00039	3.5	2	22	114	136	113	167	0.77
gi|15027663|ref|NP_149397.1|	604	COX2	Cytochrome	83.6	0.0	1.1e-27	9.7e-24	39	118	486	565	471	567	0.95
gi|15027663|ref|NP_149397.1|	604	TAA-Trp-ring	Tryptophan-ring	10.1	2.4	9.4e-05	0.84	3	25	430	453	429	474	0.87
gi|15027665|ref|NP_149399.1|	453	NUFIP1	Nuclear	-4.2	0.1	0.94	1.7e+04	37	43	30	36	28	39	0.51
gi|15027665|ref|NP_149399.1|	453	NUFIP1	Nuclear	14.1	0.1	1.7e-06	0.031	13	50	60	97	52	99	0.87
gi|15027665|ref|NP_149399.1|	453	NUFIP1	Nuclear	-4.5	0.3	1	1.8e+04	34	44	212	222	211	224	0.57
gi|15027668|ref|NP_149402.1|	688	COX1	Cytochrome	78.2	1.2	3.2e-26	5.7e-22	1	105	52	163	52	201	0.84
gi|15027668|ref|NP_149402.1|	688	COX1	Cytochrome	238.0	54.5	1e-74	1.8e-70	100	431	266	609	211	617	0.91
gi|15027669|ref|NP_149403.1|	284	NADHdh	NADH	213.0	21.9	3.1e-67	5.5e-63	4	252	26	274	23	283	0.95
gi|15027671|ref|NP_149405.1|	119	Ribosomal_L14	Ribosomal	70.9	0.0	1.1e-23	9.6e-20	1	112	1	112	1	115	0.98
gi|15027671|ref|NP_149405.1|	119	Transposon_TraM	Conjugative	20.2	0.0	4.2e-08	0.00038	43	97	54	108	32	112	0.89
gi|15027672|ref|NP_149407.1|	505	Proton_antipo_M	Proton-conducting	-4.6	5.7	0.57	1e+04	38	83	21	62	13	80	0.54
gi|15027672|ref|NP_149407.1|	505	Proton_antipo_M	Proton-conducting	170.4	26.7	2.7e-54	4.9e-50	3	292	167	451	165	452	0.96