#Protein	Length	Domain	Domain_description	score	bias	c-Evalue	i-Evalue	hmmfrom	hmmto	alifrom	alito	envfrom 	envto	acc
gi|114329815|ref|YP_740719.1|	276	Ribosomal_S13	Ribosomal	35.7	0.0	5.3e-13	9.4e-09	86	126	70	110	11	112	0.72
gi|114329817|ref|YP_740721.1|	98	Ribosomal_S19	Ribosomal	39.3	1.4	7.4e-14	4.4e-10	2	79	4	83	3	85	0.91
gi|114329817|ref|YP_740721.1|	98	Intein_splicing	Intein	13.7	0.2	7.6e-06	0.046	20	89	2	67	1	87	0.88
gi|114329817|ref|YP_740721.1|	98	DUF1030	Protein	6.6	0.5	0.0011	6.6	2	17	50	65	49	67	0.94
gi|114329817|ref|YP_740721.1|	98	DUF1030	Protein	3.6	0.4	0.0096	58	6	14	68	76	66	79	0.87
gi|114329818|ref|YP_740722.1|	262	Ribosomal_L2_C	Ribosomal	89.4	0.0	2.2e-29	2e-25	3	126	133	255	132	255	0.94
gi|114329818|ref|YP_740722.1|	262	Ribosomal_L2	Ribosomal	28.5	0.2	1.2e-10	1.1e-06	1	74	41	114	41	117	0.95
gi|114329819|ref|YP_740723.1|	157	EBV-NA3	Epstein-Barr	14.5	0.6	1.1e-06	0.02	105	160	67	125	40	131	0.77
gi|114329820|ref|YP_740724.1|	162	Oxidored_q6	NADH	68.9	0.0	1.9e-23	3.5e-19	4	130	32	139	30	140	0.86
gi|114329821|ref|YP_740725.1|	133	Ribosom_S12_S23	Ribosomal	87.1	0.9	6.7e-29	6e-25	3	109	12	116	10	121	0.87
gi|114329821|ref|YP_740725.1|	133	Ribosomal_S12	Ribosomal	14.0	0.0	7.1e-06	0.063	22	83	35	94	28	97	0.72
gi|114329822|ref|YP_740726.1|	178	Proton_antipo_M	Proton-conducting	24.3	8.7	1.8e-09	1.6e-05	194	290	14	108	6	111	0.76
gi|114329822|ref|YP_740726.1|	178	DUF1003	Protein	11.4	3.4	2.9e-05	0.26	5	48	27	73	25	80	0.85
gi|114329822|ref|YP_740726.1|	178	DUF1003	Protein	-2.7	0.1	0.71	6.3e+03	16	23	103	110	95	131	0.57
gi|114329823|ref|YP_740727.1|	442	Complex1_49kDa	Respiratory-chain	285.6	0.0	5e-89	3e-85	1	271	140	442	140	442	0.95
gi|114329823|ref|YP_740727.1|	442	RIIa	Regulatory	11.1	0.1	4e-05	0.24	20	35	190	205	190	207	0.93
gi|114329823|ref|YP_740727.1|	442	DASH_Dad4	DASH	4.2	2.0	0.0068	41	13	45	277	309	269	312	0.80
gi|114329823|ref|YP_740727.1|	442	DASH_Dad4	DASH	5.4	6.8	0.003	18	18	67	299	349	298	352	0.75
gi|114329825|ref|YP_740729.1|	179	DUF4312	Domain	5.5	0.1	0.00096	17	38	64	6	31	1	52	0.80
gi|114329825|ref|YP_740729.1|	179	DUF4312	Domain	-1.9	0.1	0.19	3.4e+03	41	41	58	58	31	91	0.61
gi|114329825|ref|YP_740729.1|	179	DUF4312	Domain	5.3	0.8	0.0011	19	54	71	98	115	86	124	0.84
gi|114329826|ref|YP_740730.1|	330	Ribosomal_S3_C	Ribosomal	-3.9	0.0	1	1.8e+04	45	67	15	37	12	40	0.68
gi|114329826|ref|YP_740730.1|	330	Ribosomal_S3_C	Ribosomal	13.8	0.0	3.4e-06	0.061	26	83	268	327	244	327	0.81
gi|114329828|ref|YP_740732.1|	59	NADHdh	NADH	34.2	3.6	9.3e-13	1.7e-08	250	297	3	50	1	52	0.93
gi|114329829|ref|YP_740733.1|	76	ATP-synt_C	ATP	24.4	0.6	3e-09	2.7e-05	7	50	15	62	10	74	0.88
gi|114329829|ref|YP_740733.1|	76	DUF3082	Protein	3.3	2.4	0.011	95	49	73	6	29	3	36	0.80
gi|114329829|ref|YP_740733.1|	76	DUF3082	Protein	14.0	0.7	5.1e-06	0.046	49	76	47	74	42	76	0.88
gi|114329830|ref|YP_740734.1|	276	DUF4980	Domain	-2.6	0.0	0.63	5.6e+03	77	91	42	56	19	74	0.54
gi|114329830|ref|YP_740734.1|	276	DUF4980	Domain	15.3	0.4	1.7e-06	0.015	28	97	93	162	88	166	0.92
gi|114329830|ref|YP_740734.1|	276	DUF4980	Domain	-3.3	0.0	0.98	8.8e+03	62	76	205	219	196	238	0.55
gi|114329830|ref|YP_740734.1|	276	Ribosomal_S7	Ribosomal	9.7	0.0	7e-05	0.62	15	124	107	250	100	267	0.67
gi|114329831|ref|YP_740735.1|	359	Proton_antipo_M	Proton-conducting	-1.5	1.0	0.062	1.1e+03	1	18	143	160	123	178	0.66
gi|114329831|ref|YP_740735.1|	359	Proton_antipo_M	Proton-conducting	30.7	26.1	9.6e-12	1.7e-07	39	191	196	356	181	358	0.87
gi|114329834|ref|YP_740738.1|	143	Ribosomal_L16	Ribosomal	42.6	0.2	3e-15	5.3e-11	7	128	9	134	3	138	0.78
gi|114329835|ref|YP_740739.1|	519	Cytochrom_C_asm	Cytochrome	29.8	38.6	5.3e-11	4.7e-07	16	204	66	239	2	254	0.72
gi|114329835|ref|YP_740739.1|	519	Cytochrom_C_asm	Cytochrome	-22.9	28.0	2	1.8e+04	82	82	328	328	216	505	0.62
gi|114329835|ref|YP_740739.1|	519	SRTM1	Serine-rich	-5.6	3.4	2	1.8e+04	43	52	11	20	4	38	0.44
gi|114329835|ref|YP_740739.1|	519	SRTM1	Serine-rich	-3.7	2.6	1.5	1.3e+04	40	57	48	69	43	81	0.51
gi|114329835|ref|YP_740739.1|	519	SRTM1	Serine-rich	-2.1	0.4	0.47	4.2e+03	38	67	123	150	118	154	0.60
gi|114329835|ref|YP_740739.1|	519	SRTM1	Serine-rich	-2.1	0.1	0.49	4.4e+03	46	68	225	247	212	257	0.43
gi|114329835|ref|YP_740739.1|	519	SRTM1	Serine-rich	-2.1	4.8	0.49	4.4e+03	34	66	257	290	247	294	0.76
gi|114329835|ref|YP_740739.1|	519	SRTM1	Serine-rich	-5.3	5.0	2	1.8e+04	39	46	339	346	321	374	0.59
gi|114329835|ref|YP_740739.1|	519	SRTM1	Serine-rich	21.9	1.7	1.6e-08	0.00015	23	63	469	511	460	517	0.81
gi|114329837|ref|YP_740741.1|	121	Oxidored_q4	NADH-ubiquinone/plastoquinone	0.1	0.2	0.049	8.9e+02	72	94	13	35	4	37	0.59
gi|114329837|ref|YP_740741.1|	121	Oxidored_q4	NADH-ubiquinone/plastoquinone	60.6	13.1	7e-21	1.3e-16	14	99	33	118	20	118	0.92
gi|114329840|ref|YP_740744.1|	198	Complex1_30kDa	Respiratory-chain	53.6	0.0	1.7e-18	3.1e-14	35	121	77	176	35	177	0.75
gi|114329841|ref|YP_740745.1|	198	Complex1_30kDa	Respiratory-chain	53.6	0.0	1.7e-18	3.1e-14	35	121	77	176	35	177	0.75
gi|114329843|ref|YP_740747.1|	426	Cytochrome_B	Cytochrome	62.4	11.5	8.3e-21	4.9e-17	15	187	33	205	20	207	0.87
gi|114329843|ref|YP_740747.1|	426	Cytochrome_B	Cytochrome	-2.5	0.1	0.65	3.9e+03	17	31	232	246	228	265	0.66
gi|114329843|ref|YP_740747.1|	426	Cytochrom_B_N_2	Cytochrome	51.2	5.1	2.4e-17	1.4e-13	2	165	90	252	89	255	0.86
gi|114329843|ref|YP_740747.1|	426	Cytochrom_B_C	Cytochrome	-0.7	0.2	0.29	1.7e+03	65	85	120	140	87	157	0.51
gi|114329843|ref|YP_740747.1|	426	Cytochrom_B_C	Cytochrome	-3.2	0.2	1.8	1e+04	65	77	235	247	227	250	0.59
gi|114329843|ref|YP_740747.1|	426	Cytochrom_B_C	Cytochrome	17.6	3.4	6.1e-07	0.0036	10	81	275	346	272	369	0.79
gi|114329843|ref|YP_740747.1|	426	Cytochrom_B_C	Cytochrome	0.7	0.1	0.11	6.5e+02	57	80	348	370	330	395	0.74
gi|114329844|ref|YP_740748.1|	749	Proton_antipo_M	Proton-conducting	-4.7	4.7	0.59	1.1e+04	47	104	42	106	31	110	0.68
gi|114329844|ref|YP_740748.1|	749	Proton_antipo_M	Proton-conducting	-4.9	4.0	0.69	1.2e+04	46	71	198	223	188	273	0.54
gi|114329844|ref|YP_740748.1|	749	Proton_antipo_M	Proton-conducting	220.0	25.7	2.1e-69	3.7e-65	1	286	301	591	301	599	0.93
gi|114329845|ref|YP_740749.1|	604	COX2	Cytochrome	7.6	0.1	0.00019	3.5	2	22	114	136	113	167	0.77
gi|114329845|ref|YP_740749.1|	604	COX2	Cytochrome	83.6	0.0	5.4e-28	9.7e-24	39	118	486	565	470	567	0.95
gi|114329850|ref|YP_740754.1|	688	COX1	Cytochrome	77.8	1.3	4e-26	7.1e-22	1	98	52	158	52	200	0.86
gi|114329850|ref|YP_740754.1|	688	COX1	Cytochrome	238.1	54.4	9.1e-75	1.6e-70	100	431	266	609	211	617	0.91
gi|114329851|ref|YP_740755.1|	285	NADHdh	NADH	214.4	23.2	1.2e-67	2.1e-63	4	252	26	274	23	285	0.94
gi|114329852|ref|YP_740756.1|	257	DUF2070	Predicted	4.8	30.8	0.0004	7.2	20	206	3	241	1	245	0.70
gi|114329853|ref|YP_740757.1|	119	Ribosomal_L14	Ribosomal	70.2	0.0	1.8e-23	1.6e-19	1	112	1	112	1	115	0.98
gi|114329853|ref|YP_740757.1|	119	Transposon_TraM	Conjugative	20.3	0.0	3.8e-08	0.00034	44	97	55	108	28	112	0.84
gi|114329855|ref|YP_740759.1|	505	Proton_antipo_M	Proton-conducting	-5.0	5.2	0.72	1.3e+04	40	82	23	61	12	84	0.47
gi|114329855|ref|YP_740759.1|	505	Proton_antipo_M	Proton-conducting	169.7	27.7	4.5e-54	8e-50	3	292	167	451	165	452	0.96
gi|114329856|ref|YP_740760.1|	159	UvrD_C	UvrD-like	6.5	11.7	0.00026	4.7	81	160	12	94	3	147	0.68