##date: 2018-11-30
mm10-chrY	HAVANA	gene	206151	207788	.	+	.	gene_id "ENSMUSG00000101796.1"; gene_type "lincRNA"; gene_name "Gm29277"; level 2; havana_gene "OTTMUSG00000045266.1";
mm10-chrY	HAVANA	transcript	206151	207788	.	+	.	gene_id "ENSMUSG00000101796.1"; transcript_id "ENSMUST00000185226.1"; gene_type "lincRNA"; gene_name "Gm29277"; transcript_type "lincRNA"; transcript_name "Gm29277-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045266.1"; havana_transcript "OTTMUST00000118890.1";
mm10-chrY	HAVANA	exon	206151	206369	.	+	.	gene_id "ENSMUSG00000101796.1"; transcript_id "ENSMUST00000185226.1"; gene_type "lincRNA"; gene_name "Gm29277"; transcript_type "lincRNA"; transcript_name "Gm29277-201"; exon_number 1; exon_id "ENSMUSE00001331346.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045266.1"; havana_transcript "OTTMUST00000118890.1";
mm10-chrY	HAVANA	exon	207227	207292	.	+	.	gene_id "ENSMUSG00000101796.1"; transcript_id "ENSMUST00000185226.1"; gene_type "lincRNA"; gene_name "Gm29277"; transcript_type "lincRNA"; transcript_name "Gm29277-201"; exon_number 2; exon_id "ENSMUSE00001324994.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045266.1"; havana_transcript "OTTMUST00000118890.1";
mm10-chrY	HAVANA	exon	207472	207788	.	+	.	gene_id "ENSMUSG00000101796.1"; transcript_id "ENSMUST00000185226.1"; gene_type "lincRNA"; gene_name "Gm29277"; transcript_type "lincRNA"; transcript_name "Gm29277-201"; exon_number 3; exon_id "ENSMUSE00001318726.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045266.1"; havana_transcript "OTTMUST00000118890.1";
mm10-chrY	HAVANA	gene	321659	323295	.	-	.	gene_id "ENSMUSG00000101492.1"; gene_type "lincRNA"; gene_name "Gm29089"; level 2; havana_gene "OTTMUSG00000045267.1";
mm10-chrY	HAVANA	transcript	321659	323295	.	-	.	gene_id "ENSMUSG00000101492.1"; transcript_id "ENSMUST00000186209.1"; gene_type "lincRNA"; gene_name "Gm29089"; transcript_type "lincRNA"; transcript_name "Gm29089-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045267.1"; havana_transcript "OTTMUST00000118891.1";
mm10-chrY	HAVANA	exon	323077	323295	.	-	.	gene_id "ENSMUSG00000101492.1"; transcript_id "ENSMUST00000186209.1"; gene_type "lincRNA"; gene_name "Gm29089"; transcript_type "lincRNA"; transcript_name "Gm29089-201"; exon_number 1; exon_id "ENSMUSE00001329207.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045267.1"; havana_transcript "OTTMUST00000118891.1";
mm10-chrY	HAVANA	exon	322155	322220	.	-	.	gene_id "ENSMUSG00000101492.1"; transcript_id "ENSMUST00000186209.1"; gene_type "lincRNA"; gene_name "Gm29089"; transcript_type "lincRNA"; transcript_name "Gm29089-201"; exon_number 2; exon_id "ENSMUSE00001322399.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045267.1"; havana_transcript "OTTMUST00000118891.1";
mm10-chrY	HAVANA	exon	321659	321975	.	-	.	gene_id "ENSMUSG00000101492.1"; transcript_id "ENSMUST00000186209.1"; gene_type "lincRNA"; gene_name "Gm29089"; transcript_type "lincRNA"; transcript_name "Gm29089-201"; exon_number 3; exon_id "ENSMUSE00001322759.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045267.1"; havana_transcript "OTTMUST00000118891.1";
mm10-chrY	HAVANA	gene	670179	695777	.	-	.	gene_id "ENSMUSG00000100968.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; level 2; havana_gene "OTTMUSG00000045271.1";
mm10-chrY	HAVANA	transcript	670179	695777	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	695611	695777	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 1; exon_id "ENSMUSE00001325687.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	695209	695400	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 2; exon_id "ENSMUSE00001318927.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	682531	682595	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 3; exon_id "ENSMUSE00001324339.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	682084	682279	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 4; exon_id "ENSMUSE00001326319.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	681456	681530	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 5; exon_id "ENSMUSE00001324769.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	681158	681350	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 6; exon_id "ENSMUSE00001330980.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	679592	679680	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 7; exon_id "ENSMUSE00001324965.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	671800	671892	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 8; exon_id "ENSMUSE00001325223.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	671489	671680	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 9; exon_id "ENSMUSE00001319817.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	670838	670939	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 10; exon_id "ENSMUSE00001327497.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	670629	670729	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 11; exon_id "ENSMUSE00001324379.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	exon	670179	670476	.	-	.	gene_id "ENSMUSG00000100968.1"; transcript_id "ENSMUST00000189146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm2098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm2098-201"; exon_number 12; exon_id "ENSMUSE00001319235.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045271.1"; havana_transcript "OTTMUST00000118905.1";
mm10-chrY	HAVANA	gene	725128	797409	.	-	.	gene_id "ENSMUSG00000053211.10"; gene_type "protein_coding"; gene_name "Zfy1"; level 2; havana_gene "OTTMUSG00000045272.1";
mm10-chrY	HAVANA	transcript	725128	797405	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	exon	797275	797405	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 1; exon_id "ENSMUSE00001322190.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	exon	797111	797180	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 2; exon_id "ENSMUSE00001328786.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	exon	759850	759937	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 3; exon_id "ENSMUSE00001036800.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	CDS	759850	759910	.	-	0	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 3; exon_id "ENSMUSE00001036800.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	start_codon	759908	759910	.	-	0	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 3; exon_id "ENSMUSE00001036800.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	exon	738592	739143	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 4; exon_id "ENSMUSE00001015775.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	CDS	738592	739143	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 4; exon_id "ENSMUSE00001015775.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	exon	735019	735168	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 5; exon_id "ENSMUSE00000993470.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	CDS	735019	735168	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 5; exon_id "ENSMUSE00000993470.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	exon	732928	733068	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 6; exon_id "ENSMUSE00000568758.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	CDS	732928	733068	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 6; exon_id "ENSMUSE00000568758.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	exon	729614	729736	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 7; exon_id "ENSMUSE00001050190.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	CDS	729614	729736	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 7; exon_id "ENSMUSE00001050190.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	exon	727509	727649	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 8; exon_id "ENSMUSE00001068922.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	CDS	727509	727649	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 8; exon_id "ENSMUSE00001068922.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	exon	725128	726595	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 9; exon_id "ENSMUSE00001324629.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	CDS	725418	726595	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 9; exon_id "ENSMUSE00001324629.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	stop_codon	725415	725417	.	-	0	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 9; exon_id "ENSMUSE00001324629.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	UTR	797275	797405	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 1; exon_id "ENSMUSE00001322190.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	UTR	797111	797180	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 2; exon_id "ENSMUSE00001328786.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	UTR	759911	759937	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 3; exon_id "ENSMUSE00001036800.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	UTR	725128	725417	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000189888.6"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-202"; exon_number 9; exon_id "ENSMUSE00001324629.1"; level 2; protein_id "ENSMUSP00000140600.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118906.1";
mm10-chrY	HAVANA	transcript	725209	797409	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	exon	797275	797409	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 1; exon_id "ENSMUSE00000448975.3"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	exon	797111	797176	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 2; exon_id "ENSMUSE00000448971.4"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	exon	759850	759937	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 3; exon_id "ENSMUSE00001036800.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	CDS	759850	759910	.	-	0	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 3; exon_id "ENSMUSE00001036800.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	start_codon	759908	759910	.	-	0	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 3; exon_id "ENSMUSE00001036800.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	exon	738592	739143	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 4; exon_id "ENSMUSE00001015775.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	CDS	738592	739143	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 4; exon_id "ENSMUSE00001015775.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	exon	735019	735168	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 5; exon_id "ENSMUSE00000993470.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	CDS	735019	735168	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 5; exon_id "ENSMUSE00000993470.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	exon	732928	733068	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 6; exon_id "ENSMUSE00000568758.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	CDS	732928	733068	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 6; exon_id "ENSMUSE00000568758.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	exon	729614	729736	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 7; exon_id "ENSMUSE00001050190.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	CDS	729614	729736	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 7; exon_id "ENSMUSE00001050190.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	exon	727509	727649	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 8; exon_id "ENSMUSE00001068922.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	CDS	727509	727649	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 8; exon_id "ENSMUSE00001068922.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	exon	725209	726595	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 9; exon_id "ENSMUSE00000476086.3"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	CDS	725418	726595	.	-	2	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 9; exon_id "ENSMUSE00000476086.3"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	stop_codon	725415	725417	.	-	0	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 9; exon_id "ENSMUSE00000476086.3"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	UTR	797275	797409	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 1; exon_id "ENSMUSE00000448975.3"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	UTR	797111	797176	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 2; exon_id "ENSMUSE00000448971.4"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	UTR	759911	759937	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 3; exon_id "ENSMUSE00001036800.1"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	UTR	725209	725417	.	-	.	gene_id "ENSMUSG00000053211.10"; transcript_id "ENSMUST00000065545.5"; gene_type "protein_coding"; gene_name "Zfy1"; transcript_type "protein_coding"; transcript_name "Zfy1-201"; exon_number 9; exon_id "ENSMUSE00000476086.3"; level 2; protein_id "ENSMUSP00000069364.4"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30539.1"; havana_gene "OTTMUSG00000045272.1"; havana_transcript "OTTMUST00000118907.1";
mm10-chrY	HAVANA	gene	818649	844224	.	+	.	gene_id "ENSMUSG00000069053.11"; gene_type "protein_coding"; gene_name "Uba1y"; level 2; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	HAVANA	transcript	818649	843684	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	818649	818750	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 1; exon_id "ENSMUSE00001335906.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	820821	820937	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 2; exon_id "ENSMUSE00001339211.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	820821	820937	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 2; exon_id "ENSMUSE00001339211.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	start_codon	820821	820823	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 2; exon_id "ENSMUSE00001339211.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	821052	821107	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 3; exon_id "ENSMUSE00000568711.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	821052	821107	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 3; exon_id "ENSMUSE00000568711.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	821192	821360	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 4; exon_id "ENSMUSE00000568709.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	821192	821360	.	+	1	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 4; exon_id "ENSMUSE00000568709.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	821450	821584	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 5; exon_id "ENSMUSE00000568707.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	821450	821584	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 5; exon_id "ENSMUSE00000568707.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	822146	822252	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 6; exon_id "ENSMUSE00000568706.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	822146	822252	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 6; exon_id "ENSMUSE00000568706.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	822459	822549	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 7; exon_id "ENSMUSE00000568705.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	822459	822549	.	+	1	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 7; exon_id "ENSMUSE00000568705.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	823144	823276	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 8; exon_id "ENSMUSE00000568703.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	823144	823276	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 8; exon_id "ENSMUSE00000568703.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	825448	825545	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 9; exon_id "ENSMUSE00000568701.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	825448	825545	.	+	2	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 9; exon_id "ENSMUSE00000568701.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	825642	825788	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 10; exon_id "ENSMUSE00000568699.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	825642	825788	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 10; exon_id "ENSMUSE00000568699.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	825899	826075	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 11; exon_id "ENSMUSE00000568695.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	825899	826075	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 11; exon_id "ENSMUSE00000568695.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	826178	826282	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 12; exon_id "ENSMUSE00000568694.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	826178	826282	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 12; exon_id "ENSMUSE00000568694.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	826371	826451	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 13; exon_id "ENSMUSE00000568691.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	826371	826451	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 13; exon_id "ENSMUSE00000568691.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	826762	826917	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 14; exon_id "ENSMUSE00000568689.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	826762	826917	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 14; exon_id "ENSMUSE00000568689.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	828766	828931	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 15; exon_id "ENSMUSE00000568687.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	828766	828931	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 15; exon_id "ENSMUSE00000568687.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	829141	829337	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 16; exon_id "ENSMUSE00000568686.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	829141	829337	.	+	2	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 16; exon_id "ENSMUSE00000568686.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	831259	831323	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 17; exon_id "ENSMUSE00000568685.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	831259	831323	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 17; exon_id "ENSMUSE00000568685.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	831575	831770	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 18; exon_id "ENSMUSE00000568683.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	831575	831770	.	+	1	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 18; exon_id "ENSMUSE00000568683.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	832324	832398	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 19; exon_id "ENSMUSE00000568680.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	832324	832398	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 19; exon_id "ENSMUSE00000568680.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	832504	832696	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 20; exon_id "ENSMUSE00000568679.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	832504	832696	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 20; exon_id "ENSMUSE00000568679.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	834175	834263	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 21; exon_id "ENSMUSE00000568678.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	834175	834263	.	+	2	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 21; exon_id "ENSMUSE00000568678.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	841968	842060	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 22; exon_id "ENSMUSE00000568677.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	841968	842060	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 22; exon_id "ENSMUSE00000568677.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	842180	842371	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 23; exon_id "ENSMUSE00000568676.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	842180	842371	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 23; exon_id "ENSMUSE00000568676.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	842924	843025	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 24; exon_id "ENSMUSE00000568675.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	842924	843025	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 24; exon_id "ENSMUSE00000568675.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	843134	843234	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 25; exon_id "ENSMUSE00000568674.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	843134	843234	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 25; exon_id "ENSMUSE00000568674.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	exon	843387	843684	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 26; exon_id "ENSMUSE00001330998.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	CDS	843387	843519	.	+	1	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 26; exon_id "ENSMUSE00001330998.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	stop_codon	843520	843522	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 26; exon_id "ENSMUSE00001330998.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	UTR	818649	818750	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 1; exon_id "ENSMUSE00001335906.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	HAVANA	UTR	843520	843684	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000190013.6"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-202"; exon_number 26; exon_id "ENSMUSE00001330998.1"; level 2; protein_id "ENSMUSP00000140543.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1"; havana_transcript "OTTMUST00000118908.1";
mm10-chrY	ENSEMBL	transcript	818713	844224	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	818713	818814	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 1; exon_id "ENSMUSE00000704571.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	820821	820937	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 2; exon_id "ENSMUSE00001339211.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	820821	820937	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 2; exon_id "ENSMUSE00001339211.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	start_codon	820821	820823	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 2; exon_id "ENSMUSE00001339211.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	821052	821107	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 3; exon_id "ENSMUSE00000568711.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	821052	821107	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 3; exon_id "ENSMUSE00000568711.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	821192	821360	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 4; exon_id "ENSMUSE00000568709.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	821192	821360	.	+	1	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 4; exon_id "ENSMUSE00000568709.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	821450	821584	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 5; exon_id "ENSMUSE00000568707.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	821450	821584	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 5; exon_id "ENSMUSE00000568707.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	822146	822252	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 6; exon_id "ENSMUSE00000568706.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	822146	822252	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 6; exon_id "ENSMUSE00000568706.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	822459	822549	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 7; exon_id "ENSMUSE00000568705.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	822459	822549	.	+	1	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 7; exon_id "ENSMUSE00000568705.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	823144	823276	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 8; exon_id "ENSMUSE00000568703.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	823144	823276	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 8; exon_id "ENSMUSE00000568703.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	825448	825545	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 9; exon_id "ENSMUSE00000568701.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	825448	825545	.	+	2	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 9; exon_id "ENSMUSE00000568701.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	825642	825788	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 10; exon_id "ENSMUSE00000568699.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	825642	825788	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 10; exon_id "ENSMUSE00000568699.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	825899	826075	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 11; exon_id "ENSMUSE00000568695.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	825899	826075	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 11; exon_id "ENSMUSE00000568695.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	826178	826282	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 12; exon_id "ENSMUSE00000568694.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	826178	826282	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 12; exon_id "ENSMUSE00000568694.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	826371	826451	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 13; exon_id "ENSMUSE00000568691.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	826371	826451	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 13; exon_id "ENSMUSE00000568691.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	826762	826917	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 14; exon_id "ENSMUSE00000568689.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	826762	826917	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 14; exon_id "ENSMUSE00000568689.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	828766	828931	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 15; exon_id "ENSMUSE00000568687.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	828766	828931	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 15; exon_id "ENSMUSE00000568687.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	829141	829337	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 16; exon_id "ENSMUSE00000568686.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	829141	829337	.	+	2	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 16; exon_id "ENSMUSE00000568686.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	831259	831323	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 17; exon_id "ENSMUSE00000568685.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	831259	831323	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 17; exon_id "ENSMUSE00000568685.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	831575	831770	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 18; exon_id "ENSMUSE00000568683.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	831575	831770	.	+	1	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 18; exon_id "ENSMUSE00000568683.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	832324	832398	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 19; exon_id "ENSMUSE00000568680.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	832324	832398	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 19; exon_id "ENSMUSE00000568680.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	832504	832696	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 20; exon_id "ENSMUSE00000568679.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	832504	832696	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 20; exon_id "ENSMUSE00000568679.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	834175	834263	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 21; exon_id "ENSMUSE00000568678.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	834175	834263	.	+	2	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 21; exon_id "ENSMUSE00000568678.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	841968	842060	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 22; exon_id "ENSMUSE00000568677.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	841968	842060	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 22; exon_id "ENSMUSE00000568677.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	842180	842371	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 23; exon_id "ENSMUSE00000568676.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	842180	842371	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 23; exon_id "ENSMUSE00000568676.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	842924	843025	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 24; exon_id "ENSMUSE00000568675.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	842924	843025	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 24; exon_id "ENSMUSE00000568675.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	843134	843234	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 25; exon_id "ENSMUSE00000568674.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	843134	843234	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 25; exon_id "ENSMUSE00000568674.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	exon	843387	844224	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 26; exon_id "ENSMUSE00000656575.2"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	CDS	843387	843519	.	+	1	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 26; exon_id "ENSMUSE00000656575.2"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	stop_codon	843520	843522	.	+	0	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 26; exon_id "ENSMUSE00000656575.2"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	UTR	818713	818814	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 1; exon_id "ENSMUSE00000704571.1"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	ENSEMBL	UTR	843520	844224	.	+	.	gene_id "ENSMUSG00000069053.11"; transcript_id "ENSMUST00000115894.2"; gene_type "protein_coding"; gene_name "Uba1y"; transcript_type "protein_coding"; transcript_name "Uba1y-201"; exon_number 26; exon_id "ENSMUSE00000656575.2"; level 3; protein_id "ENSMUSP00000111560.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30540.1"; havana_gene "OTTMUSG00000045273.1";
mm10-chrY	HAVANA	gene	841783	847750	.	-	.	gene_id "ENSMUSG00000101036.1"; gene_type "antisense"; gene_name "Gm28588"; level 2; havana_gene "OTTMUSG00000045274.1";
mm10-chrY	HAVANA	transcript	841783	847750	.	-	.	gene_id "ENSMUSG00000101036.1"; transcript_id "ENSMUST00000191581.1"; gene_type "antisense"; gene_name "Gm28588"; transcript_type "antisense"; transcript_name "Gm28588-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045274.1"; havana_transcript "OTTMUST00000118909.1";
mm10-chrY	HAVANA	exon	847553	847750	.	-	.	gene_id "ENSMUSG00000101036.1"; transcript_id "ENSMUST00000191581.1"; gene_type "antisense"; gene_name "Gm28588"; transcript_type "antisense"; transcript_name "Gm28588-201"; exon_number 1; exon_id "ENSMUSE00001320861.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045274.1"; havana_transcript "OTTMUST00000118909.1";
mm10-chrY	HAVANA	exon	841783	842380	.	-	.	gene_id "ENSMUSG00000101036.1"; transcript_id "ENSMUST00000191581.1"; gene_type "antisense"; gene_name "Gm28588"; transcript_type "antisense"; transcript_name "Gm28588-201"; exon_number 2; exon_id "ENSMUSE00001329244.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045274.1"; havana_transcript "OTTMUST00000118909.1";
mm10-chrY	HAVANA	gene	869709	873309	.	-	.	gene_id "ENSMUSG00000101107.1"; gene_type "lincRNA"; gene_name "Gm28587"; level 2; havana_gene "OTTMUSG00000045275.1";
mm10-chrY	HAVANA	transcript	869709	873309	.	-	.	gene_id "ENSMUSG00000101107.1"; transcript_id "ENSMUST00000187181.1"; gene_type "lincRNA"; gene_name "Gm28587"; transcript_type "lincRNA"; transcript_name "Gm28587-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045275.1"; havana_transcript "OTTMUST00000118910.1";
mm10-chrY	HAVANA	exon	872673	873309	.	-	.	gene_id "ENSMUSG00000101107.1"; transcript_id "ENSMUST00000187181.1"; gene_type "lincRNA"; gene_name "Gm28587"; transcript_type "lincRNA"; transcript_name "Gm28587-201"; exon_number 1; exon_id "ENSMUSE00001323025.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045275.1"; havana_transcript "OTTMUST00000118910.1";
mm10-chrY	HAVANA	exon	869709	872076	.	-	.	gene_id "ENSMUSG00000101107.1"; transcript_id "ENSMUST00000187181.1"; gene_type "lincRNA"; gene_name "Gm28587"; transcript_type "lincRNA"; transcript_name "Gm28587-201"; exon_number 2; exon_id "ENSMUSE00001326084.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045275.1"; havana_transcript "OTTMUST00000118910.1";
mm10-chrY	HAVANA	gene	873640	874215	.	+	.	gene_id "ENSMUSG00000101666.1"; gene_type "processed_pseudogene"; gene_name "Rhoay-ps3"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045276.1";
mm10-chrY	HAVANA	transcript	873640	874215	.	+	.	gene_id "ENSMUSG00000101666.1"; transcript_id "ENSMUST00000187648.1"; gene_type "processed_pseudogene"; gene_name "Rhoay-ps3"; transcript_type "processed_pseudogene"; transcript_name "Rhoay-ps3-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045276.1"; havana_transcript "OTTMUST00000118911.1";
mm10-chrY	HAVANA	exon	873640	874215	.	+	.	gene_id "ENSMUSG00000101666.1"; transcript_id "ENSMUST00000187648.1"; gene_type "processed_pseudogene"; gene_name "Rhoay-ps3"; transcript_type "processed_pseudogene"; transcript_name "Rhoay-ps3-201"; exon_number 1; exon_id "ENSMUSE00001329125.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045276.1"; havana_transcript "OTTMUST00000118911.1";
mm10-chrY	HAVANA	gene	897788	956786	.	+	.	gene_id "ENSMUSG00000056673.14"; gene_type "protein_coding"; gene_name "Kdm5d"; level 2; havana_gene "OTTMUSG00000045277.1";
mm10-chrY	HAVANA	transcript	897788	917605	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	exon	897788	898115	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 1; exon_id "ENSMUSE00000403858.4"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	CDS	897966	898115	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 1; exon_id "ENSMUSE00000403858.4"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	start_codon	897966	897968	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 1; exon_id "ENSMUSE00000403858.4"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	exon	898550	898627	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 2; exon_id "ENSMUSE00000568662.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	CDS	898550	898627	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 2; exon_id "ENSMUSE00000568662.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	exon	899428	899550	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 3; exon_id "ENSMUSE00000568661.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	CDS	899428	899550	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 3; exon_id "ENSMUSE00000568661.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	exon	899787	899957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 4; exon_id "ENSMUSE00000568660.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	CDS	899787	899957	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 4; exon_id "ENSMUSE00000568660.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	exon	900479	900613	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 5; exon_id "ENSMUSE00000568659.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	CDS	900479	900613	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 5; exon_id "ENSMUSE00000568659.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	exon	910448	910586	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 6; exon_id "ENSMUSE00000568658.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	CDS	910448	910586	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 6; exon_id "ENSMUSE00000568658.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	exon	910686	910849	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 7; exon_id "ENSMUSE00000568655.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	CDS	910686	910849	.	+	2	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 7; exon_id "ENSMUSE00000568655.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	exon	914025	914183	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 8; exon_id "ENSMUSE00000568653.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	CDS	914025	914183	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 8; exon_id "ENSMUSE00000568653.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	exon	916641	916760	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 9; exon_id "ENSMUSE00000568651.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	CDS	916641	916760	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 9; exon_id "ENSMUSE00000568651.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	exon	916846	917605	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 10; exon_id "ENSMUSE00001327417.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	CDS	916846	917034	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 10; exon_id "ENSMUSE00001327417.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	stop_codon	917035	917037	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 10; exon_id "ENSMUSE00001327417.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	UTR	897788	897965	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 1; exon_id "ENSMUSE00000403858.4"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	UTR	917035	917605	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189069.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-207"; exon_number 10; exon_id "ENSMUSE00001327417.1"; level 2; protein_id "ENSMUSP00000139636.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118912.1";
mm10-chrY	HAVANA	transcript	897790	946316	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	897790	898115	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 1; exon_id "ENSMUSE00001319692.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	897966	898115	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 1; exon_id "ENSMUSE00001319692.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	start_codon	897966	897968	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 1; exon_id "ENSMUSE00001319692.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	898550	898627	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 2; exon_id "ENSMUSE00000568662.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	898550	898627	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 2; exon_id "ENSMUSE00000568662.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	899428	899550	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 3; exon_id "ENSMUSE00000568661.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	899428	899550	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 3; exon_id "ENSMUSE00000568661.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	899787	899957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 4; exon_id "ENSMUSE00000568660.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	899787	899957	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 4; exon_id "ENSMUSE00000568660.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	900479	900613	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 5; exon_id "ENSMUSE00000568659.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	900479	900613	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 5; exon_id "ENSMUSE00000568659.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	910448	910586	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 6; exon_id "ENSMUSE00000568658.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	910448	910586	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 6; exon_id "ENSMUSE00000568658.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	910686	910849	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 7; exon_id "ENSMUSE00000568655.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	910686	910849	.	+	2	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 7; exon_id "ENSMUSE00000568655.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	914025	914183	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 8; exon_id "ENSMUSE00000568653.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	914025	914183	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 8; exon_id "ENSMUSE00000568653.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	916641	916760	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 9; exon_id "ENSMUSE00000568651.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	916641	916760	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 9; exon_id "ENSMUSE00000568651.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	916846	917004	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 10; exon_id "ENSMUSE00000447886.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	916846	917004	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 10; exon_id "ENSMUSE00000447886.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	921402	921583	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 11; exon_id "ENSMUSE00000568648.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	921402	921583	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 11; exon_id "ENSMUSE00000568648.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	921674	921836	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 12; exon_id "ENSMUSE00000568646.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	921674	921836	.	+	1	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 12; exon_id "ENSMUSE00000568646.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	927007	927126	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 13; exon_id "ENSMUSE00000568645.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	927007	927126	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 13; exon_id "ENSMUSE00000568645.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	927245	927439	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 14; exon_id "ENSMUSE00000568643.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	927245	927439	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 14; exon_id "ENSMUSE00000568643.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	927710	927891	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 15; exon_id "ENSMUSE00000568642.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	927710	927891	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 15; exon_id "ENSMUSE00000568642.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	927970	928094	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 16; exon_id "ENSMUSE00000568638.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	927970	928094	.	+	1	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 16; exon_id "ENSMUSE00000568638.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	928237	928384	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 17; exon_id "ENSMUSE00000568637.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	928237	928384	.	+	2	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 17; exon_id "ENSMUSE00000568637.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	936876	936972	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 18; exon_id "ENSMUSE00000568633.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	936876	936972	.	+	1	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 18; exon_id "ENSMUSE00000568633.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	937813	938171	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 19; exon_id "ENSMUSE00000568631.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	937813	938171	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 19; exon_id "ENSMUSE00000568631.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	939819	939957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 20; exon_id "ENSMUSE00000568630.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	939819	939957	.	+	1	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 20; exon_id "ENSMUSE00000568630.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	940599	940778	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 21; exon_id "ENSMUSE00000568629.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	940599	940778	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 21; exon_id "ENSMUSE00000568629.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	940905	941042	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 22; exon_id "ENSMUSE00000568628.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	940905	941042	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 22; exon_id "ENSMUSE00000568628.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	941227	941823	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 23; exon_id "ENSMUSE00000568627.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	941227	941823	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 23; exon_id "ENSMUSE00000568627.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	942231	942312	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 24; exon_id "ENSMUSE00000568626.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	942231	942312	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 24; exon_id "ENSMUSE00000568626.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	942442	942641	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 25; exon_id "ENSMUSE00000568625.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	942442	942641	.	+	2	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 25; exon_id "ENSMUSE00000568625.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	exon	942824	946316	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 26; exon_id "ENSMUSE00001335494.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	CDS	942824	943162	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 26; exon_id "ENSMUSE00001335494.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	stop_codon	943163	943165	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 26; exon_id "ENSMUSE00001335494.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	UTR	897790	897965	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 1; exon_id "ENSMUSE00001319692.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	UTR	943163	946316	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000055032.13"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "protein_coding"; transcript_name "Kdm5d-201"; exon_number 26; exon_id "ENSMUSE00001335494.1"; level 2; protein_id "ENSMUSP00000061095.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30541.1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118913.1";
mm10-chrY	HAVANA	transcript	897793	917330	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000188910.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-206"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118914.1";
mm10-chrY	HAVANA	exon	897793	898115	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000188910.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-206"; exon_number 1; exon_id "ENSMUSE00001335250.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118914.1";
mm10-chrY	HAVANA	exon	898550	898627	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000188910.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-206"; exon_number 2; exon_id "ENSMUSE00001332485.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118914.1";
mm10-chrY	HAVANA	exon	899428	899550	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000188910.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-206"; exon_number 3; exon_id "ENSMUSE00001332028.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118914.1";
mm10-chrY	HAVANA	exon	899787	899957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000188910.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-206"; exon_number 4; exon_id "ENSMUSE00001334845.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118914.1";
mm10-chrY	HAVANA	exon	900479	900613	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000188910.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-206"; exon_number 5; exon_id "ENSMUSE00001329229.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118914.1";
mm10-chrY	HAVANA	exon	910448	910586	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000188910.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-206"; exon_number 6; exon_id "ENSMUSE00001332495.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118914.1";
mm10-chrY	HAVANA	exon	910686	910849	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000188910.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-206"; exon_number 7; exon_id "ENSMUSE00001324460.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118914.1";
mm10-chrY	HAVANA	exon	914025	916760	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000188910.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-206"; exon_number 8; exon_id "ENSMUSE00001321874.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118914.1";
mm10-chrY	HAVANA	exon	916846	917330	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000188910.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-206"; exon_number 9; exon_id "ENSMUSE00001327386.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118914.1";
mm10-chrY	HAVANA	transcript	897795	941046	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	897795	898115	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 1; exon_id "ENSMUSE00001333882.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	897966	898115	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 1; exon_id "ENSMUSE00001333882.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	start_codon	897966	897968	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 1; exon_id "ENSMUSE00001333882.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	898550	898627	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 2; exon_id "ENSMUSE00000568662.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	898550	898627	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 2; exon_id "ENSMUSE00000568662.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	899428	899550	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 3; exon_id "ENSMUSE00000568661.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	899428	899550	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 3; exon_id "ENSMUSE00000568661.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	899787	899957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 4; exon_id "ENSMUSE00000568660.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	899787	899957	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 4; exon_id "ENSMUSE00000568660.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	900479	900613	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 5; exon_id "ENSMUSE00000568659.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	900479	900613	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 5; exon_id "ENSMUSE00000568659.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	910448	910586	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 6; exon_id "ENSMUSE00000568658.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	910448	910586	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 6; exon_id "ENSMUSE00000568658.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	910686	910849	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 7; exon_id "ENSMUSE00000568655.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	910686	910849	.	+	2	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 7; exon_id "ENSMUSE00000568655.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	914025	914183	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 8; exon_id "ENSMUSE00000568653.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	914025	914183	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 8; exon_id "ENSMUSE00000568653.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	916641	916760	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 9; exon_id "ENSMUSE00000568651.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	916641	916760	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 9; exon_id "ENSMUSE00000568651.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	916846	917004	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 10; exon_id "ENSMUSE00000447886.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	916846	917004	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 10; exon_id "ENSMUSE00000447886.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	921402	921583	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 11; exon_id "ENSMUSE00000568648.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	921402	921583	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 11; exon_id "ENSMUSE00000568648.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	921674	921836	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 12; exon_id "ENSMUSE00000568646.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	921674	921836	.	+	1	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 12; exon_id "ENSMUSE00000568646.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	927007	927126	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 13; exon_id "ENSMUSE00000568645.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	927007	927126	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 13; exon_id "ENSMUSE00000568645.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	927245	927439	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 14; exon_id "ENSMUSE00000568643.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	927245	927439	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 14; exon_id "ENSMUSE00000568643.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	927603	927891	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 15; exon_id "ENSMUSE00001321007.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	CDS	927603	927617	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 15; exon_id "ENSMUSE00001321007.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	stop_codon	927618	927620	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 15; exon_id "ENSMUSE00001321007.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	927970	928094	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 16; exon_id "ENSMUSE00001331642.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	928237	928384	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 17; exon_id "ENSMUSE00001326828.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	936876	936972	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 18; exon_id "ENSMUSE00001325087.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	937813	938171	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 19; exon_id "ENSMUSE00001333186.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	939819	939957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 20; exon_id "ENSMUSE00001318261.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	940599	940778	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 21; exon_id "ENSMUSE00001318870.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	exon	940905	941046	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 22; exon_id "ENSMUSE00001330303.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	UTR	897795	897965	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 1; exon_id "ENSMUSE00001333882.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	UTR	927618	927891	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 15; exon_id "ENSMUSE00001321007.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	UTR	927970	928094	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 16; exon_id "ENSMUSE00001331642.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	UTR	928237	928384	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 17; exon_id "ENSMUSE00001326828.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	UTR	936876	936972	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 18; exon_id "ENSMUSE00001325087.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	UTR	937813	938171	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 19; exon_id "ENSMUSE00001333186.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	UTR	939819	939957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 20; exon_id "ENSMUSE00001318261.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	UTR	940599	940778	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 21; exon_id "ENSMUSE00001318870.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	UTR	940905	941046	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186696.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-203"; exon_number 22; exon_id "ENSMUSE00001330303.1"; level 2; protein_id "ENSMUSP00000140663.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118915.1";
mm10-chrY	HAVANA	transcript	897838	956786	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	897838	898115	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 1; exon_id "ENSMUSE00001318654.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	CDS	897966	898115	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 1; exon_id "ENSMUSE00001318654.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	start_codon	897966	897968	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 1; exon_id "ENSMUSE00001318654.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	898550	898627	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 2; exon_id "ENSMUSE00000568662.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	CDS	898550	898627	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 2; exon_id "ENSMUSE00000568662.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	899428	899550	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 3; exon_id "ENSMUSE00000568661.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	CDS	899428	899550	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 3; exon_id "ENSMUSE00000568661.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	899787	899957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 4; exon_id "ENSMUSE00000568660.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	CDS	899787	899957	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 4; exon_id "ENSMUSE00000568660.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	900479	900613	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 5; exon_id "ENSMUSE00000568659.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	CDS	900479	900613	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 5; exon_id "ENSMUSE00000568659.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	910448	910586	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 6; exon_id "ENSMUSE00000568658.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	CDS	910448	910586	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 6; exon_id "ENSMUSE00000568658.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	910657	910849	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 7; exon_id "ENSMUSE00001334500.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	CDS	910657	910673	.	+	2	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 7; exon_id "ENSMUSE00001334500.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	stop_codon	910674	910676	.	+	0	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 7; exon_id "ENSMUSE00001334500.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	914025	914183	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 8; exon_id "ENSMUSE00001319321.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	916641	916760	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 9; exon_id "ENSMUSE00001333054.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	916846	917004	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 10; exon_id "ENSMUSE00001328086.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	921402	921583	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 11; exon_id "ENSMUSE00001320036.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	921674	921836	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 12; exon_id "ENSMUSE00001319849.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	927007	927126	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 13; exon_id "ENSMUSE00001318428.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	927245	927439	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 14; exon_id "ENSMUSE00001329974.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	927603	927891	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 15; exon_id "ENSMUSE00001318303.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	927970	928094	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 16; exon_id "ENSMUSE00001331642.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	928237	928384	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 17; exon_id "ENSMUSE00001326828.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	936876	936972	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 18; exon_id "ENSMUSE00001325087.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	937813	938171	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 19; exon_id "ENSMUSE00001333186.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	939819	939957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 20; exon_id "ENSMUSE00001318261.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	940599	940778	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 21; exon_id "ENSMUSE00001318870.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	940905	941042	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 22; exon_id "ENSMUSE00001321511.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	941227	941823	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 23; exon_id "ENSMUSE00001333455.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	942231	942312	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 24; exon_id "ENSMUSE00001327403.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	942442	942641	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 25; exon_id "ENSMUSE00001334998.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	942824	942917	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 26; exon_id "ENSMUSE00001335751.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	953150	953403	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 27; exon_id "ENSMUSE00001324184.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	exon	955788	956786	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 28; exon_id "ENSMUSE00001320871.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	897838	897965	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 1; exon_id "ENSMUSE00001318654.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	910674	910849	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 7; exon_id "ENSMUSE00001334500.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	914025	914183	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 8; exon_id "ENSMUSE00001319321.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	916641	916760	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 9; exon_id "ENSMUSE00001333054.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	916846	917004	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 10; exon_id "ENSMUSE00001328086.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	921402	921583	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 11; exon_id "ENSMUSE00001320036.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	921674	921836	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 12; exon_id "ENSMUSE00001319849.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	927007	927126	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 13; exon_id "ENSMUSE00001318428.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	927245	927439	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 14; exon_id "ENSMUSE00001329974.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	927603	927891	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 15; exon_id "ENSMUSE00001318303.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	927970	928094	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 16; exon_id "ENSMUSE00001331642.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	928237	928384	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 17; exon_id "ENSMUSE00001326828.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	936876	936972	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 18; exon_id "ENSMUSE00001325087.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	937813	938171	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 19; exon_id "ENSMUSE00001333186.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	939819	939957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 20; exon_id "ENSMUSE00001318261.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	940599	940778	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 21; exon_id "ENSMUSE00001318870.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	940905	941042	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 22; exon_id "ENSMUSE00001321511.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	941227	941823	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 23; exon_id "ENSMUSE00001333455.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	942231	942312	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 24; exon_id "ENSMUSE00001327403.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	942442	942641	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 25; exon_id "ENSMUSE00001334998.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	942824	942917	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 26; exon_id "ENSMUSE00001335751.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	953150	953403	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 27; exon_id "ENSMUSE00001324184.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	UTR	955788	956786	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000186726.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "nonsense_mediated_decay"; transcript_name "Kdm5d-204"; exon_number 28; exon_id "ENSMUSE00001320871.1"; level 2; protein_id "ENSMUSP00000140462.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118916.1";
mm10-chrY	HAVANA	transcript	898032	921980	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	898032	898115	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 1; exon_id "ENSMUSE00001318668.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	898550	898627	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 2; exon_id "ENSMUSE00001332485.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	899428	899550	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 3; exon_id "ENSMUSE00001332028.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	899787	899957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 4; exon_id "ENSMUSE00001334845.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	900479	900613	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 5; exon_id "ENSMUSE00001329229.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	910448	910586	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 6; exon_id "ENSMUSE00001332495.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	910686	910849	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 7; exon_id "ENSMUSE00001324460.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	914025	914183	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 8; exon_id "ENSMUSE00001319321.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	916641	916760	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 9; exon_id "ENSMUSE00001333054.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	916846	917004	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 10; exon_id "ENSMUSE00001328086.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	921402	921583	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 11; exon_id "ENSMUSE00001320036.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	exon	921674	921980	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189626.6"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-208"; exon_number 12; exon_id "ENSMUSE00001333039.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118917.1";
mm10-chrY	HAVANA	transcript	899482	900934	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000185542.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-202"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118918.1";
mm10-chrY	HAVANA	exon	899482	899550	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000185542.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-202"; exon_number 1; exon_id "ENSMUSE00001324445.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118918.1";
mm10-chrY	HAVANA	exon	899787	899957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000185542.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-202"; exon_number 2; exon_id "ENSMUSE00001334845.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118918.1";
mm10-chrY	HAVANA	exon	900479	900934	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000185542.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-202"; exon_number 3; exon_id "ENSMUSE00001329714.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118918.1";
mm10-chrY	HAVANA	transcript	916529	943562	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	916529	916760	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 1; exon_id "ENSMUSE00001327478.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	916846	917004	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 2; exon_id "ENSMUSE00001328086.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	921402	921583	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 3; exon_id "ENSMUSE00001320036.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	921674	921836	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 4; exon_id "ENSMUSE00001319849.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	927007	927126	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 5; exon_id "ENSMUSE00001318428.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	927245	927439	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 6; exon_id "ENSMUSE00001329974.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	927710	927891	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 7; exon_id "ENSMUSE00001327084.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	927970	928094	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 8; exon_id "ENSMUSE00001331642.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	928237	928384	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 9; exon_id "ENSMUSE00001326828.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	936876	936972	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 10; exon_id "ENSMUSE00001325087.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	937813	938171	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 11; exon_id "ENSMUSE00001333186.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	939819	939957	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 12; exon_id "ENSMUSE00001318261.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	940599	940778	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 13; exon_id "ENSMUSE00001318870.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	940905	941042	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 14; exon_id "ENSMUSE00001321511.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	941227	941823	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 15; exon_id "ENSMUSE00001333455.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	942231	942312	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 16; exon_id "ENSMUSE00001327403.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	942442	942641	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 17; exon_id "ENSMUSE00001334998.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	exon	942824	943562	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000187296.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-205"; exon_number 18; exon_id "ENSMUSE00000508503.6"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118919.1";
mm10-chrY	HAVANA	transcript	937783	940552	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189955.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-209"; level 2; transcript_support_level "NA"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118920.1";
mm10-chrY	HAVANA	exon	937783	940552	.	+	.	gene_id "ENSMUSG00000056673.14"; transcript_id "ENSMUST00000189955.1"; gene_type "protein_coding"; gene_name "Kdm5d"; transcript_type "retained_intron"; transcript_name "Kdm5d-209"; exon_number 1; exon_id "ENSMUSE00001318237.1"; level 2; transcript_support_level "NA"; havana_gene "OTTMUSG00000045277.1"; havana_transcript "OTTMUST00000118920.1";
mm10-chrY	ENSEMBL	gene	991630	991748	.	-	.	gene_id "ENSMUSG00000075874.1"; gene_type "rRNA"; gene_name "n-R5s1"; level 3;
mm10-chrY	ENSEMBL	transcript	991630	991748	.	-	.	gene_id "ENSMUSG00000075874.1"; transcript_id "ENSMUST00000101925.1"; gene_type "rRNA"; gene_name "n-R5s1"; transcript_type "rRNA"; transcript_name "n-R5s1-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	991630	991748	.	-	.	gene_id "ENSMUSG00000075874.1"; transcript_id "ENSMUST00000101925.1"; gene_type "rRNA"; gene_name "n-R5s1"; transcript_type "rRNA"; transcript_name "n-R5s1-201"; exon_number 1; exon_id "ENSMUSE00000660239.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	gene	991657	991716	.	-	.	gene_id "ENSMUSG00000106618.1"; gene_type "miRNA"; gene_name "Gm47281"; level 3;
mm10-chrY	ENSEMBL	transcript	991657	991716	.	-	.	gene_id "ENSMUSG00000106618.1"; transcript_id "ENSMUST00000197757.1"; gene_type "miRNA"; gene_name "Gm47281"; transcript_type "miRNA"; transcript_name "Gm47281-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	991657	991716	.	-	.	gene_id "ENSMUSG00000106618.1"; transcript_id "ENSMUST00000197757.1"; gene_type "miRNA"; gene_name "Gm47281"; transcript_type "miRNA"; transcript_name "Gm47281-201"; exon_number 1; exon_id "ENSMUSE00001353131.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	1010543	1028847	.	+	.	gene_id "ENSMUSG00000069049.11"; gene_type "protein_coding"; gene_name "Eif2s3y"; level 2; havana_gene "OTTMUSG00000021559.1";
mm10-chrY	HAVANA	transcript	1010543	1028594	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1010543	1010685	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 1; exon_id "ENSMUSE00000773651.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1010617	1010685	.	+	0	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 1; exon_id "ENSMUSE00000773651.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	start_codon	1010617	1010619	.	+	0	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 1; exon_id "ENSMUSE00000773651.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1011260	1011323	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 2; exon_id "ENSMUSE00001263194.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1011260	1011323	.	+	0	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 2; exon_id "ENSMUSE00001263194.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1011840	1011967	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 3; exon_id "ENSMUSE00001310281.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1011840	1011967	.	+	2	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 3; exon_id "ENSMUSE00001310281.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1012048	1012169	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 4; exon_id "ENSMUSE00001264783.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1012048	1012169	.	+	0	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 4; exon_id "ENSMUSE00001264783.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1013379	1013473	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 5; exon_id "ENSMUSE00001253599.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1013379	1013473	.	+	1	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 5; exon_id "ENSMUSE00001253599.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1014634	1014792	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 6; exon_id "ENSMUSE00001213952.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1014634	1014792	.	+	2	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 6; exon_id "ENSMUSE00001213952.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1016057	1016191	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 7; exon_id "ENSMUSE00000568614.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1016057	1016191	.	+	2	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 7; exon_id "ENSMUSE00000568614.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1016590	1016684	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 8; exon_id "ENSMUSE00000568611.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1016590	1016684	.	+	2	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 8; exon_id "ENSMUSE00000568611.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1017364	1017508	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 9; exon_id "ENSMUSE00000568610.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1017364	1017508	.	+	0	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 9; exon_id "ENSMUSE00000568610.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1019986	1020155	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 10; exon_id "ENSMUSE00001297222.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1019986	1020155	.	+	2	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 10; exon_id "ENSMUSE00001297222.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1023302	1023474	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 11; exon_id "ENSMUSE00001233032.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1023302	1023474	.	+	0	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 11; exon_id "ENSMUSE00001233032.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	exon	1028188	1028594	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 12; exon_id "ENSMUSE00000789510.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	CDS	1028188	1028248	.	+	1	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 12; exon_id "ENSMUSE00000789510.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	stop_codon	1028249	1028251	.	+	0	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 12; exon_id "ENSMUSE00000789510.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	UTR	1010543	1010616	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 1; exon_id "ENSMUSE00000773651.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	UTR	1028249	1028594	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000091197.3"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "protein_coding"; transcript_name "Eif2s3y-201"; exon_number 12; exon_id "ENSMUSE00000789510.1"; level 2; protein_id "ENSMUSP00000088736.3"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30542.1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051153.1";
mm10-chrY	HAVANA	transcript	1010595	1015461	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000137006.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-203"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051154.1";
mm10-chrY	HAVANA	exon	1010595	1010685	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000137006.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-203"; exon_number 1; exon_id "ENSMUSE00000758479.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051154.1";
mm10-chrY	HAVANA	exon	1011260	1011323	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000137006.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-203"; exon_number 2; exon_id "ENSMUSE00001308537.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051154.1";
mm10-chrY	HAVANA	exon	1014634	1015461	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000137006.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-203"; exon_number 3; exon_id "ENSMUSE00000819493.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051154.1";
mm10-chrY	HAVANA	transcript	1010595	1028847	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000148961.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-205"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051155.1";
mm10-chrY	HAVANA	exon	1010595	1010685	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000148961.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-205"; exon_number 1; exon_id "ENSMUSE00000758479.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051155.1";
mm10-chrY	HAVANA	exon	1011260	1011323	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000148961.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-205"; exon_number 2; exon_id "ENSMUSE00001308537.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051155.1";
mm10-chrY	HAVANA	exon	1011840	1011967	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000148961.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-205"; exon_number 3; exon_id "ENSMUSE00001217722.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051155.1";
mm10-chrY	HAVANA	exon	1012048	1012169	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000148961.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-205"; exon_number 4; exon_id "ENSMUSE00001238139.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051155.1";
mm10-chrY	HAVANA	exon	1013379	1013473	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000148961.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-205"; exon_number 5; exon_id "ENSMUSE00001282100.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051155.1";
mm10-chrY	HAVANA	exon	1014634	1014792	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000148961.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-205"; exon_number 6; exon_id "ENSMUSE00001283068.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051155.1";
mm10-chrY	HAVANA	exon	1016057	1017508	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000148961.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-205"; exon_number 7; exon_id "ENSMUSE00000799774.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051155.1";
mm10-chrY	HAVANA	exon	1019986	1020155	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000148961.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-205"; exon_number 8; exon_id "ENSMUSE00001304794.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051155.1";
mm10-chrY	HAVANA	exon	1023302	1023474	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000148961.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-205"; exon_number 9; exon_id "ENSMUSE00001231705.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051155.1";
mm10-chrY	HAVANA	exon	1028188	1028847	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000148961.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-205"; exon_number 10; exon_id "ENSMUSE00000736001.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051155.1";
mm10-chrY	HAVANA	transcript	1010599	1012299	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000154556.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-206"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051156.1";
mm10-chrY	HAVANA	exon	1010599	1010685	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000154556.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-206"; exon_number 1; exon_id "ENSMUSE00000709653.2"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051156.1";
mm10-chrY	HAVANA	exon	1011260	1011323	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000154556.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-206"; exon_number 2; exon_id "ENSMUSE00001308537.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051156.1";
mm10-chrY	HAVANA	exon	1011840	1011967	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000154556.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-206"; exon_number 3; exon_id "ENSMUSE00001217722.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051156.1";
mm10-chrY	HAVANA	exon	1012048	1012299	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000154556.7"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-206"; exon_number 4; exon_id "ENSMUSE00000787853.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051156.1";
mm10-chrY	HAVANA	transcript	1010624	1016099	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000139083.1"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "processed_transcript"; transcript_name "Eif2s3y-204"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051159.1";
mm10-chrY	HAVANA	exon	1010624	1010685	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000139083.1"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "processed_transcript"; transcript_name "Eif2s3y-204"; exon_number 1; exon_id "ENSMUSE00000805558.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051159.1";
mm10-chrY	HAVANA	exon	1011260	1011323	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000139083.1"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "processed_transcript"; transcript_name "Eif2s3y-204"; exon_number 2; exon_id "ENSMUSE00001308537.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051159.1";
mm10-chrY	HAVANA	exon	1011840	1011967	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000139083.1"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "processed_transcript"; transcript_name "Eif2s3y-204"; exon_number 3; exon_id "ENSMUSE00001217722.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051159.1";
mm10-chrY	HAVANA	exon	1012048	1012169	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000139083.1"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "processed_transcript"; transcript_name "Eif2s3y-204"; exon_number 4; exon_id "ENSMUSE00001238139.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051159.1";
mm10-chrY	HAVANA	exon	1014634	1014792	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000139083.1"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "processed_transcript"; transcript_name "Eif2s3y-204"; exon_number 5; exon_id "ENSMUSE00001283068.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051159.1";
mm10-chrY	HAVANA	exon	1016057	1016099	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000139083.1"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "processed_transcript"; transcript_name "Eif2s3y-204"; exon_number 6; exon_id "ENSMUSE00000785903.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051159.1";
mm10-chrY	HAVANA	transcript	1023106	1028408	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000134820.1"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-202"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051158.1";
mm10-chrY	HAVANA	exon	1023106	1023474	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000134820.1"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-202"; exon_number 1; exon_id "ENSMUSE00000768057.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051158.1";
mm10-chrY	HAVANA	exon	1028188	1028408	.	+	.	gene_id "ENSMUSG00000069049.11"; transcript_id "ENSMUST00000134820.1"; gene_type "protein_coding"; gene_name "Eif2s3y"; transcript_type "retained_intron"; transcript_name "Eif2s3y-202"; exon_number 2; exon_id "ENSMUSE00000806758.1"; level 2; transcript_support_level "2"; havana_gene "OTTMUSG00000021559.1"; havana_transcript "OTTMUST00000051158.1";
mm10-chrY	HAVANA	gene	1048393	1049134	.	+	.	gene_id "ENSMUSG00000099876.1"; gene_type "lincRNA"; gene_name "Gm29650"; level 2; havana_gene "OTTMUSG00000045278.1";
mm10-chrY	HAVANA	transcript	1048393	1049134	.	+	.	gene_id "ENSMUSG00000099876.1"; transcript_id "ENSMUST00000188485.1"; gene_type "lincRNA"; gene_name "Gm29650"; transcript_type "lincRNA"; transcript_name "Gm29650-201"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045278.1"; havana_transcript "OTTMUST00000118921.1";
mm10-chrY	HAVANA	exon	1048393	1049134	.	+	.	gene_id "ENSMUSG00000099876.1"; transcript_id "ENSMUST00000188485.1"; gene_type "lincRNA"; gene_name "Gm29650"; transcript_type "lincRNA"; transcript_name "Gm29650-201"; exon_number 1; exon_id "ENSMUSE00001335106.1"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045278.1"; havana_transcript "OTTMUST00000118921.1";
mm10-chrY	HAVANA	gene	1055764	1058868	.	-	.	gene_id "ENSMUSG00000091749.7"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; level 2; havana_gene "OTTMUSG00000035432.2";
mm10-chrY	HAVANA	transcript	1055764	1058868	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000172304.7"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "processed_transcript"; transcript_name "Tspy-ps-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000090600.1";
mm10-chrY	HAVANA	exon	1058817	1058868	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000172304.7"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "processed_transcript"; transcript_name "Tspy-ps-202"; exon_number 1; exon_id "ENSMUSE00000902419.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000090600.1";
mm10-chrY	HAVANA	exon	1057166	1057261	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000172304.7"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "processed_transcript"; transcript_name "Tspy-ps-202"; exon_number 2; exon_id "ENSMUSE00000890941.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000090600.1";
mm10-chrY	HAVANA	exon	1056505	1056590	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000172304.7"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "processed_transcript"; transcript_name "Tspy-ps-202"; exon_number 3; exon_id "ENSMUSE00000893941.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000090600.1";
mm10-chrY	HAVANA	exon	1055764	1055850	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000172304.7"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "processed_transcript"; transcript_name "Tspy-ps-202"; exon_number 4; exon_id "ENSMUSE00000882443.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000090600.1";
mm10-chrY	HAVANA	transcript	1055766	1057642	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000169014.2"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "processed_transcript"; transcript_name "Tspy-ps-201"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000118922.1";
mm10-chrY	HAVANA	exon	1057166	1057642	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000169014.2"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "processed_transcript"; transcript_name "Tspy-ps-201"; exon_number 1; exon_id "ENSMUSE00000906730.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000118922.1";
mm10-chrY	HAVANA	exon	1056505	1056590	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000169014.2"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "processed_transcript"; transcript_name "Tspy-ps-201"; exon_number 2; exon_id "ENSMUSE00000893941.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000118922.1";
mm10-chrY	HAVANA	exon	1055766	1055850	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000169014.2"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "processed_transcript"; transcript_name "Tspy-ps-201"; exon_number 3; exon_id "ENSMUSE00001325086.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000118922.1";
mm10-chrY	HAVANA	transcript	1056533	1058804	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000186546.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Tspy-ps-203"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000090598.2";
mm10-chrY	HAVANA	exon	1058201	1058804	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000186546.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Tspy-ps-203"; exon_number 1; exon_id "ENSMUSE00001328489.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000090598.2";
mm10-chrY	HAVANA	exon	1057163	1057238	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000186546.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Tspy-ps-203"; exon_number 2; exon_id "ENSMUSE00000907479.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000090598.2";
mm10-chrY	HAVANA	exon	1056911	1057022	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000186546.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Tspy-ps-203"; exon_number 3; exon_id "ENSMUSE00001331574.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000090598.2";
mm10-chrY	HAVANA	exon	1056686	1056827	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000186546.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Tspy-ps-203"; exon_number 4; exon_id "ENSMUSE00001331011.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000090598.2";
mm10-chrY	HAVANA	exon	1056533	1056587	.	-	.	gene_id "ENSMUSG00000091749.7"; transcript_id "ENSMUST00000186546.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Tspy-ps"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Tspy-ps-203"; exon_number 5; exon_id "ENSMUSE00001327291.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000035432.2"; havana_transcript "OTTMUST00000090598.2";
mm10-chrY	HAVANA	gene	1096861	1245759	.	-	.	gene_id "ENSMUSG00000068457.14"; gene_type "protein_coding"; gene_name "Uty"; level 2; havana_gene "OTTMUSG00000032814.5";
mm10-chrY	HAVANA	transcript	1096861	1245691	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1245600	1245691	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 1; exon_id "ENSMUSE00000772483.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1245600	1245630	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 1; exon_id "ENSMUSE00000772483.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	start_codon	1245628	1245630	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 1; exon_id "ENSMUSE00000772483.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1245407	1245512	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 2; exon_id "ENSMUSE00000765804.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1245407	1245512	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 2; exon_id "ENSMUSE00000765804.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1245156	1245219	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 3; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1245156	1245219	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 3; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1199455	1199513	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 4; exon_id "ENSMUSE00001239060.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1199455	1199513	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 4; exon_id "ENSMUSE00001239060.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1197206	1197326	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 5; exon_id "ENSMUSE00001230668.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1197206	1197326	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 5; exon_id "ENSMUSE00001230668.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 6; exon_id "ENSMUSE00001268974.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1189336	1189390	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 6; exon_id "ENSMUSE00001268974.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1186774	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 7; exon_id "ENSMUSE00001220880.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1186774	1186808	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 7; exon_id "ENSMUSE00001220880.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1176491	1176584	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 8; exon_id "ENSMUSE00001227166.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1176491	1176584	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 8; exon_id "ENSMUSE00001227166.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1174728	1174854	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 9; exon_id "ENSMUSE00001240844.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1174728	1174854	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 9; exon_id "ENSMUSE00001240844.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1170904	1171002	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 10; exon_id "ENSMUSE00001258796.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1170904	1171002	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 10; exon_id "ENSMUSE00001258796.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1169965	1170184	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 11; exon_id "ENSMUSE00001266800.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1169965	1170184	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 11; exon_id "ENSMUSE00001266800.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1168090	1168185	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 12; exon_id "ENSMUSE00001298232.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1168090	1168185	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 12; exon_id "ENSMUSE00001298232.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1157907	1158634	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 13; exon_id "ENSMUSE00001232923.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1157907	1158634	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 13; exon_id "ENSMUSE00001232923.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1154155	1154284	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 14; exon_id "ENSMUSE00001275725.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1154155	1154284	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 14; exon_id "ENSMUSE00001275725.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1152769	1152874	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 15; exon_id "ENSMUSE00001275177.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1152769	1152874	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 15; exon_id "ENSMUSE00001275177.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1151948	1152153	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 16; exon_id "ENSMUSE00001298158.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1151948	1152153	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 16; exon_id "ENSMUSE00001298158.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1137807	1137871	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 17; exon_id "ENSMUSE00001239364.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1137807	1137871	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 17; exon_id "ENSMUSE00001239364.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1137658	1137732	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 18; exon_id "ENSMUSE00001219263.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1137658	1137732	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 18; exon_id "ENSMUSE00001219263.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1136848	1136996	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 19; exon_id "ENSMUSE00001229938.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1136848	1136996	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 19; exon_id "ENSMUSE00001229938.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1134872	1134986	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 20; exon_id "ENSMUSE00001261285.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1134872	1134986	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 20; exon_id "ENSMUSE00001261285.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1131036	1131223	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 21; exon_id "ENSMUSE00001219305.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1131036	1131223	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 21; exon_id "ENSMUSE00001219305.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1129870	1130011	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 22; exon_id "ENSMUSE00001258699.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1129870	1130011	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 22; exon_id "ENSMUSE00001258699.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1102765	1102891	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 23; exon_id "ENSMUSE00001227370.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1102765	1102891	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 23; exon_id "ENSMUSE00001227370.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1099582	1099752	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 24; exon_id "ENSMUSE00001254760.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1099582	1099752	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 24; exon_id "ENSMUSE00001254760.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	exon	1096861	1098573	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 25; exon_id "ENSMUSE00000820681.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	CDS	1098550	1098573	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 25; exon_id "ENSMUSE00000820681.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	stop_codon	1098547	1098549	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 25; exon_id "ENSMUSE00000820681.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	UTR	1245631	1245691	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 1; exon_id "ENSMUSE00000772483.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	UTR	1096861	1098549	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143286.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-205"; exon_number 25; exon_id "ENSMUSE00000820681.1"; level 2; protein_id "ENSMUSP00000115113.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081745.1";
mm10-chrY	HAVANA	transcript	1097144	1245694	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1245407	1245694	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 1; exon_id "ENSMUSE00000729711.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	CDS	1245407	1245552	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 1; exon_id "ENSMUSE00000729711.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	start_codon	1245550	1245552	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 1; exon_id "ENSMUSE00000729711.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1245156	1245219	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 2; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	CDS	1245156	1245219	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 2; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1239711	1239819	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 3; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	CDS	1239711	1239819	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 3; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1226695	1226826	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 4; exon_id "ENSMUSE00000752023.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	CDS	1226714	1226826	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 4; exon_id "ENSMUSE00000752023.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	stop_codon	1226711	1226713	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 4; exon_id "ENSMUSE00000752023.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1224497	1224546	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 5; exon_id "ENSMUSE00001304630.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1199455	1199513	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 6; exon_id "ENSMUSE00001255113.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1197206	1197326	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 7; exon_id "ENSMUSE00001262323.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 8; exon_id "ENSMUSE00001240806.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1186774	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 9; exon_id "ENSMUSE00001218390.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1176491	1176584	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 10; exon_id "ENSMUSE00001257876.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1174728	1174854	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 11; exon_id "ENSMUSE00001312545.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1170904	1170954	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 12; exon_id "ENSMUSE00000780246.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1169965	1170184	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 13; exon_id "ENSMUSE00001307508.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1168090	1168185	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 14; exon_id "ENSMUSE00001287784.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1161179	1161230	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 15; exon_id "ENSMUSE00000773821.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1157907	1158634	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 16; exon_id "ENSMUSE00001303762.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1154155	1154284	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 17; exon_id "ENSMUSE00001227982.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1152769	1152874	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 18; exon_id "ENSMUSE00001212425.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1151948	1152153	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 19; exon_id "ENSMUSE00001260470.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1137807	1137871	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 20; exon_id "ENSMUSE00001285709.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1137658	1137732	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 21; exon_id "ENSMUSE00001282582.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1136848	1136996	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 22; exon_id "ENSMUSE00001284507.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1134872	1134986	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 23; exon_id "ENSMUSE00001222165.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1131036	1131223	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 24; exon_id "ENSMUSE00001265448.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1129870	1130011	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 25; exon_id "ENSMUSE00001216066.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1102765	1102891	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 26; exon_id "ENSMUSE00001246797.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1099582	1099752	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 27; exon_id "ENSMUSE00001297931.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	exon	1097144	1098573	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 28; exon_id "ENSMUSE00001254574.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1245553	1245694	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 1; exon_id "ENSMUSE00000729711.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1226695	1226713	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 4; exon_id "ENSMUSE00000752023.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1224497	1224546	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 5; exon_id "ENSMUSE00001304630.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1199455	1199513	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 6; exon_id "ENSMUSE00001255113.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1197206	1197326	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 7; exon_id "ENSMUSE00001262323.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 8; exon_id "ENSMUSE00001240806.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1186774	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 9; exon_id "ENSMUSE00001218390.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1176491	1176584	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 10; exon_id "ENSMUSE00001257876.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1174728	1174854	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 11; exon_id "ENSMUSE00001312545.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1170904	1170954	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 12; exon_id "ENSMUSE00000780246.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1169965	1170184	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 13; exon_id "ENSMUSE00001307508.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1168090	1168185	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 14; exon_id "ENSMUSE00001287784.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1161179	1161230	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 15; exon_id "ENSMUSE00000773821.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1157907	1158634	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 16; exon_id "ENSMUSE00001303762.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1154155	1154284	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 17; exon_id "ENSMUSE00001227982.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1152769	1152874	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 18; exon_id "ENSMUSE00001212425.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1151948	1152153	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 19; exon_id "ENSMUSE00001260470.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1137807	1137871	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 20; exon_id "ENSMUSE00001285709.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1137658	1137732	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 21; exon_id "ENSMUSE00001282582.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1136848	1136996	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 22; exon_id "ENSMUSE00001284507.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1134872	1134986	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 23; exon_id "ENSMUSE00001222165.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1131036	1131223	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 24; exon_id "ENSMUSE00001265448.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1129870	1130011	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 25; exon_id "ENSMUSE00001216066.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1102765	1102891	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 26; exon_id "ENSMUSE00001246797.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1099582	1099752	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 27; exon_id "ENSMUSE00001297931.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	UTR	1097144	1098573	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154666.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-210"; exon_number 28; exon_id "ENSMUSE00001254574.1"; level 2; protein_id "ENSMUSP00000122818.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081744.1";
mm10-chrY	HAVANA	transcript	1097144	1245718	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1245407	1245718	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 1; exon_id "ENSMUSE00000777392.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1245407	1245552	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 1; exon_id "ENSMUSE00000777392.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	start_codon	1245550	1245552	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 1; exon_id "ENSMUSE00000777392.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1245156	1245219	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 2; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1245156	1245219	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 2; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1239711	1239819	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 3; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1239711	1239819	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 3; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1224497	1224546	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 4; exon_id "ENSMUSE00001273041.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1224497	1224546	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 4; exon_id "ENSMUSE00001273041.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1199455	1199513	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 5; exon_id "ENSMUSE00001239060.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1199455	1199513	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 5; exon_id "ENSMUSE00001239060.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1197206	1197326	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 6; exon_id "ENSMUSE00001230668.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1197206	1197326	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 6; exon_id "ENSMUSE00001230668.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 7; exon_id "ENSMUSE00001268974.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1189336	1189390	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 7; exon_id "ENSMUSE00001268974.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1186774	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 8; exon_id "ENSMUSE00001220880.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1186774	1186808	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 8; exon_id "ENSMUSE00001220880.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1176491	1176584	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 9; exon_id "ENSMUSE00001227166.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1176491	1176584	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 9; exon_id "ENSMUSE00001227166.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1174728	1174854	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 10; exon_id "ENSMUSE00001240844.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1174728	1174854	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 10; exon_id "ENSMUSE00001240844.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1170904	1171002	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 11; exon_id "ENSMUSE00001258796.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1170904	1171002	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 11; exon_id "ENSMUSE00001258796.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1169965	1170184	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 12; exon_id "ENSMUSE00001266800.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1169965	1170184	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 12; exon_id "ENSMUSE00001266800.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1169123	1169257	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 13; exon_id "ENSMUSE00001237954.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1169123	1169257	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 13; exon_id "ENSMUSE00001237954.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1168090	1168185	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 14; exon_id "ENSMUSE00001298232.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1168090	1168185	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 14; exon_id "ENSMUSE00001298232.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1157907	1158634	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 15; exon_id "ENSMUSE00001232923.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1157907	1158634	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 15; exon_id "ENSMUSE00001232923.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1154155	1154284	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 16; exon_id "ENSMUSE00001275725.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1154155	1154284	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 16; exon_id "ENSMUSE00001275725.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1152769	1152874	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 17; exon_id "ENSMUSE00001275177.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1152769	1152874	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 17; exon_id "ENSMUSE00001275177.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1151948	1152153	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 18; exon_id "ENSMUSE00001298158.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1151948	1152153	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 18; exon_id "ENSMUSE00001298158.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1137807	1137871	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 19; exon_id "ENSMUSE00001239364.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1137807	1137871	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 19; exon_id "ENSMUSE00001239364.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1137658	1137732	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 20; exon_id "ENSMUSE00001219263.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1137658	1137732	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 20; exon_id "ENSMUSE00001219263.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1136848	1136996	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 21; exon_id "ENSMUSE00001229938.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1136848	1136996	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 21; exon_id "ENSMUSE00001229938.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1134872	1134986	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 22; exon_id "ENSMUSE00001261285.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1134872	1134986	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 22; exon_id "ENSMUSE00001261285.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1131036	1131223	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 23; exon_id "ENSMUSE00001219305.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1131036	1131223	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 23; exon_id "ENSMUSE00001219305.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1129870	1130011	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 24; exon_id "ENSMUSE00001258699.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1129870	1130011	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 24; exon_id "ENSMUSE00001258699.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1102765	1102891	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 25; exon_id "ENSMUSE00001227370.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1102765	1102891	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 25; exon_id "ENSMUSE00001227370.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1099582	1099752	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 26; exon_id "ENSMUSE00001254760.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1099582	1099752	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 26; exon_id "ENSMUSE00001254760.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	exon	1097144	1098573	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 27; exon_id "ENSMUSE00001240199.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	CDS	1098550	1098573	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 27; exon_id "ENSMUSE00001240199.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	stop_codon	1098547	1098549	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 27; exon_id "ENSMUSE00001240199.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	UTR	1245553	1245718	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 1; exon_id "ENSMUSE00000777392.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	UTR	1097144	1098549	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000069309.13"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-201"; exon_number 27; exon_id "ENSMUSE00001240199.1"; level 2; protein_id "ENSMUSP00000070012.7"; transcript_support_level "1"; tag "basic"; tag "appris_principal_3"; tag "CCDS"; ccdsid "CCDS41216.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081742.1";
mm10-chrY	HAVANA	transcript	1097671	1245724	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1245407	1245724	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 1; exon_id "ENSMUSE00000726435.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1245407	1245552	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 1; exon_id "ENSMUSE00000726435.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	start_codon	1245550	1245552	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 1; exon_id "ENSMUSE00000726435.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1245156	1245216	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 2; exon_id "ENSMUSE00000817544.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1245156	1245216	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 2; exon_id "ENSMUSE00000817544.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1239711	1239819	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 3; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1239711	1239819	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 3; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1224497	1224546	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 4; exon_id "ENSMUSE00001273041.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1224497	1224546	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 4; exon_id "ENSMUSE00001273041.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1199455	1199513	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 5; exon_id "ENSMUSE00001239060.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1199455	1199513	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 5; exon_id "ENSMUSE00001239060.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1197206	1197326	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 6; exon_id "ENSMUSE00001230668.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1197206	1197326	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 6; exon_id "ENSMUSE00001230668.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 7; exon_id "ENSMUSE00001268974.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1189336	1189390	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 7; exon_id "ENSMUSE00001268974.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1186774	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 8; exon_id "ENSMUSE00001220880.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1186774	1186808	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 8; exon_id "ENSMUSE00001220880.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1176491	1176584	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 9; exon_id "ENSMUSE00001227166.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1176491	1176584	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 9; exon_id "ENSMUSE00001227166.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1174728	1174854	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 10; exon_id "ENSMUSE00001240844.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1174728	1174854	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 10; exon_id "ENSMUSE00001240844.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1170904	1171002	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 11; exon_id "ENSMUSE00001258796.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1170904	1171002	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 11; exon_id "ENSMUSE00001258796.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1169965	1170184	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 12; exon_id "ENSMUSE00001266800.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1169965	1170184	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 12; exon_id "ENSMUSE00001266800.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1169123	1169257	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 13; exon_id "ENSMUSE00001237954.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1169123	1169257	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 13; exon_id "ENSMUSE00001237954.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1168090	1168185	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 14; exon_id "ENSMUSE00001298232.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1168090	1168185	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 14; exon_id "ENSMUSE00001298232.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1157907	1158634	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 15; exon_id "ENSMUSE00001232923.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1157907	1158634	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 15; exon_id "ENSMUSE00001232923.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1154155	1154284	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 16; exon_id "ENSMUSE00001275725.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1154155	1154284	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 16; exon_id "ENSMUSE00001275725.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1152769	1152874	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 17; exon_id "ENSMUSE00001275177.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1152769	1152874	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 17; exon_id "ENSMUSE00001275177.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1151948	1152153	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 18; exon_id "ENSMUSE00001298158.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1151948	1152153	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 18; exon_id "ENSMUSE00001298158.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1137807	1137871	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 19; exon_id "ENSMUSE00001239364.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1137807	1137871	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 19; exon_id "ENSMUSE00001239364.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1137658	1137732	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 20; exon_id "ENSMUSE00001219263.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1137658	1137732	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 20; exon_id "ENSMUSE00001219263.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1136848	1136996	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 21; exon_id "ENSMUSE00001229938.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1136848	1136996	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 21; exon_id "ENSMUSE00001229938.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1134872	1134986	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 22; exon_id "ENSMUSE00001261285.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1134872	1134986	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 22; exon_id "ENSMUSE00001261285.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1131036	1131223	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 23; exon_id "ENSMUSE00001219305.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1131036	1131223	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 23; exon_id "ENSMUSE00001219305.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1129870	1130011	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 24; exon_id "ENSMUSE00001258699.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1129870	1130011	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 24; exon_id "ENSMUSE00001258699.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1102765	1102891	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 25; exon_id "ENSMUSE00001227370.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1102765	1102891	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 25; exon_id "ENSMUSE00001227370.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1099582	1099752	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 26; exon_id "ENSMUSE00001254760.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1099582	1099752	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 26; exon_id "ENSMUSE00001254760.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	exon	1097671	1098573	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 27; exon_id "ENSMUSE00000780262.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	CDS	1098550	1098573	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 27; exon_id "ENSMUSE00000780262.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	stop_codon	1098547	1098549	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 27; exon_id "ENSMUSE00000780262.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	UTR	1245553	1245724	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 1; exon_id "ENSMUSE00000726435.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	UTR	1097671	1098549	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000139365.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-204"; exon_number 27; exon_id "ENSMUSE00000780262.1"; level 2; protein_id "ENSMUSP00000114752.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85834.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081732.1";
mm10-chrY	HAVANA	transcript	1098020	1245759	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1245513	1245759	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 1; exon_id "ENSMUSE00000759069.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1245156	1245219	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 2; exon_id "ENSMUSE00001271002.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1245156	1245176	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 2; exon_id "ENSMUSE00001271002.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	start_codon	1245174	1245176	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 2; exon_id "ENSMUSE00001271002.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1239711	1239819	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 3; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1239711	1239819	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 3; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1224497	1224546	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 4; exon_id "ENSMUSE00001273041.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1224497	1224546	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 4; exon_id "ENSMUSE00001273041.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1199455	1199513	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 5; exon_id "ENSMUSE00001239060.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1199455	1199513	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 5; exon_id "ENSMUSE00001239060.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1197206	1197326	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 6; exon_id "ENSMUSE00001230668.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1197206	1197326	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 6; exon_id "ENSMUSE00001230668.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 7; exon_id "ENSMUSE00001268974.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1189336	1189390	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 7; exon_id "ENSMUSE00001268974.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1186774	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 8; exon_id "ENSMUSE00001220880.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1186774	1186808	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 8; exon_id "ENSMUSE00001220880.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1176491	1176584	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 9; exon_id "ENSMUSE00001227166.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1176491	1176584	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 9; exon_id "ENSMUSE00001227166.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1174728	1174854	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 10; exon_id "ENSMUSE00001240844.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1174728	1174854	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 10; exon_id "ENSMUSE00001240844.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1170904	1171002	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 11; exon_id "ENSMUSE00001258796.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1170904	1171002	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 11; exon_id "ENSMUSE00001258796.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1169965	1170184	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 12; exon_id "ENSMUSE00001266800.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1169965	1170184	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 12; exon_id "ENSMUSE00001266800.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1169123	1169257	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 13; exon_id "ENSMUSE00001237954.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1169123	1169257	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 13; exon_id "ENSMUSE00001237954.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1168090	1168185	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 14; exon_id "ENSMUSE00001298232.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1168090	1168185	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 14; exon_id "ENSMUSE00001298232.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1157907	1158634	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 15; exon_id "ENSMUSE00001232923.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1157907	1158634	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 15; exon_id "ENSMUSE00001232923.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1154155	1154284	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 16; exon_id "ENSMUSE00001275725.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1154155	1154284	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 16; exon_id "ENSMUSE00001275725.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1152769	1152874	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 17; exon_id "ENSMUSE00001275177.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1152769	1152874	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 17; exon_id "ENSMUSE00001275177.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1151948	1152153	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 18; exon_id "ENSMUSE00001298158.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1151948	1152153	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 18; exon_id "ENSMUSE00001298158.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1137807	1137871	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 19; exon_id "ENSMUSE00001239364.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1137807	1137871	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 19; exon_id "ENSMUSE00001239364.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1137658	1137732	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 20; exon_id "ENSMUSE00001219263.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1137658	1137732	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 20; exon_id "ENSMUSE00001219263.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1136848	1136996	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 21; exon_id "ENSMUSE00001229938.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1136848	1136996	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 21; exon_id "ENSMUSE00001229938.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1134872	1134986	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 22; exon_id "ENSMUSE00001261285.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1134872	1134986	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 22; exon_id "ENSMUSE00001261285.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1131036	1131223	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 23; exon_id "ENSMUSE00001219305.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1131036	1131223	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 23; exon_id "ENSMUSE00001219305.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1129870	1130011	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 24; exon_id "ENSMUSE00001258699.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1129870	1130011	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 24; exon_id "ENSMUSE00001258699.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1102765	1102891	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 25; exon_id "ENSMUSE00001227370.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1102765	1102891	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 25; exon_id "ENSMUSE00001227370.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1099582	1099752	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 26; exon_id "ENSMUSE00001254760.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1099582	1099752	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 26; exon_id "ENSMUSE00001254760.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	exon	1098020	1098573	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 27; exon_id "ENSMUSE00000803914.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	CDS	1098550	1098573	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 27; exon_id "ENSMUSE00000803914.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	stop_codon	1098547	1098549	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 27; exon_id "ENSMUSE00000803914.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	UTR	1245513	1245759	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 1; exon_id "ENSMUSE00000759069.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	UTR	1245177	1245219	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 2; exon_id "ENSMUSE00001271002.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	UTR	1098020	1098549	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154004.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-208"; exon_number 27; exon_id "ENSMUSE00000803914.1"; level 2; protein_id "ENSMUSP00000114910.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; tag "CCDS"; ccdsid "CCDS85833.1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081733.2";
mm10-chrY	HAVANA	transcript	1134814	1137181	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000185837.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-212"; level 2; transcript_support_level "NA"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000118923.1";
mm10-chrY	HAVANA	exon	1134814	1137181	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000185837.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-212"; exon_number 1; exon_id "ENSMUSE00001329627.1"; level 2; transcript_support_level "NA"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000118923.1";
mm10-chrY	HAVANA	transcript	1151949	1245756	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1245600	1245756	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 1; exon_id "ENSMUSE00000798690.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	CDS	1245600	1245630	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 1; exon_id "ENSMUSE00000798690.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	start_codon	1245628	1245630	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 1; exon_id "ENSMUSE00000798690.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1245407	1245512	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 2; exon_id "ENSMUSE00000765804.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	CDS	1245407	1245512	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 2; exon_id "ENSMUSE00000765804.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1245156	1245219	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 3; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	CDS	1245156	1245219	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 3; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1239992	1240147	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 4; exon_id "ENSMUSE00000835140.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	CDS	1240115	1240147	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 4; exon_id "ENSMUSE00000835140.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	stop_codon	1240112	1240114	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 4; exon_id "ENSMUSE00000835140.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1239711	1239819	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 5; exon_id "ENSMUSE00001294525.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1224497	1224546	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 6; exon_id "ENSMUSE00001304630.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1199455	1199513	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 7; exon_id "ENSMUSE00001255113.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1197206	1197326	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 8; exon_id "ENSMUSE00001262323.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 9; exon_id "ENSMUSE00001240806.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1186774	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 10; exon_id "ENSMUSE00001218390.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1176496	1176584	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 11; exon_id "ENSMUSE00000824187.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1174728	1174854	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 12; exon_id "ENSMUSE00001312545.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1170904	1171002	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 13; exon_id "ENSMUSE00001256511.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1169965	1170184	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 14; exon_id "ENSMUSE00001307508.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1169123	1169257	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 15; exon_id "ENSMUSE00001309458.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1168090	1168185	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 16; exon_id "ENSMUSE00001287784.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1161175	1161230	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 17; exon_id "ENSMUSE00000821415.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1157907	1158634	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 18; exon_id "ENSMUSE00001303762.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1154155	1154284	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 19; exon_id "ENSMUSE00001227982.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1152769	1152874	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 20; exon_id "ENSMUSE00001212425.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	exon	1151949	1152153	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 21; exon_id "ENSMUSE00000770818.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1245631	1245756	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 1; exon_id "ENSMUSE00000798690.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1239992	1240114	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 4; exon_id "ENSMUSE00000835140.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1239711	1239819	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 5; exon_id "ENSMUSE00001294525.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1224497	1224546	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 6; exon_id "ENSMUSE00001304630.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1199455	1199513	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 7; exon_id "ENSMUSE00001255113.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1197206	1197326	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 8; exon_id "ENSMUSE00001262323.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 9; exon_id "ENSMUSE00001240806.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1186774	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 10; exon_id "ENSMUSE00001218390.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1176496	1176584	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 11; exon_id "ENSMUSE00000824187.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1174728	1174854	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 12; exon_id "ENSMUSE00001312545.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1170904	1171002	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 13; exon_id "ENSMUSE00001256511.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1169965	1170184	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 14; exon_id "ENSMUSE00001307508.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1169123	1169257	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 15; exon_id "ENSMUSE00001309458.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1168090	1168185	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 16; exon_id "ENSMUSE00001287784.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1161175	1161230	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 17; exon_id "ENSMUSE00000821415.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1157907	1158634	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 18; exon_id "ENSMUSE00001303762.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1154155	1154284	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 19; exon_id "ENSMUSE00001227982.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1152769	1152874	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 20; exon_id "ENSMUSE00001212425.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	UTR	1151949	1152153	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000143958.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-206"; exon_number 21; exon_id "ENSMUSE00000770818.1"; level 2; protein_id "ENSMUSP00000120069.1"; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081730.2";
mm10-chrY	HAVANA	transcript	1157961	1245702	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1245600	1245702	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 1; exon_id "ENSMUSE00000744772.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1245600	1245630	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 1; exon_id "ENSMUSE00000744772.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	start_codon	1245628	1245630	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 1; exon_id "ENSMUSE00000744772.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1245407	1245512	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 2; exon_id "ENSMUSE00000765804.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1245407	1245512	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 2; exon_id "ENSMUSE00000765804.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1245156	1245219	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 3; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1245156	1245219	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 3; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1239711	1239819	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 4; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1239711	1239819	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 4; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1224497	1224546	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 5; exon_id "ENSMUSE00001273041.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1224497	1224546	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 5; exon_id "ENSMUSE00001273041.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1199455	1199513	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 6; exon_id "ENSMUSE00001239060.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1199455	1199513	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 6; exon_id "ENSMUSE00001239060.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1197206	1197326	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 7; exon_id "ENSMUSE00001230668.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1197206	1197326	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 7; exon_id "ENSMUSE00001230668.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 8; exon_id "ENSMUSE00001268974.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1189336	1189390	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 8; exon_id "ENSMUSE00001268974.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1186774	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 9; exon_id "ENSMUSE00001220880.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1186774	1186808	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 9; exon_id "ENSMUSE00001220880.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1176491	1176584	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 10; exon_id "ENSMUSE00001227166.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1176491	1176584	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 10; exon_id "ENSMUSE00001227166.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1174728	1174854	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 11; exon_id "ENSMUSE00001240844.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1174728	1174854	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 11; exon_id "ENSMUSE00001240844.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1170904	1171002	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 12; exon_id "ENSMUSE00001258796.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1170904	1171002	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 12; exon_id "ENSMUSE00001258796.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1169965	1170184	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 13; exon_id "ENSMUSE00001266800.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1169965	1170184	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 13; exon_id "ENSMUSE00001266800.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1168090	1168185	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 14; exon_id "ENSMUSE00001298232.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1168090	1168185	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 14; exon_id "ENSMUSE00001298232.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	exon	1157961	1158634	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 15; exon_id "ENSMUSE00000832337.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	CDS	1157961	1158634	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 15; exon_id "ENSMUSE00000832337.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	UTR	1245631	1245702	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000137048.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "protein_coding"; transcript_name "Uty-203"; exon_number 1; exon_id "ENSMUSE00000744772.1"; level 2; protein_id "ENSMUSP00000119406.1"; transcript_support_level "1"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081743.2";
mm10-chrY	HAVANA	transcript	1160804	1169186	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000133976.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081746.1";
mm10-chrY	HAVANA	exon	1169123	1169186	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000133976.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-202"; exon_number 1; exon_id "ENSMUSE00000728118.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081746.1";
mm10-chrY	HAVANA	exon	1168090	1168185	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000133976.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-202"; exon_number 2; exon_id "ENSMUSE00001287784.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081746.1";
mm10-chrY	HAVANA	exon	1160804	1161230	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000133976.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-202"; exon_number 3; exon_id "ENSMUSE00000837949.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081746.1";
mm10-chrY	HAVANA	transcript	1172547	1245738	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000157073.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "processed_transcript"; transcript_name "Uty-211"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081731.2";
mm10-chrY	HAVANA	exon	1245407	1245738	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000157073.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "processed_transcript"; transcript_name "Uty-211"; exon_number 1; exon_id "ENSMUSE00000862046.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081731.2";
mm10-chrY	HAVANA	exon	1245156	1245219	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000157073.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "processed_transcript"; transcript_name "Uty-211"; exon_number 2; exon_id "ENSMUSE00001280821.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081731.2";
mm10-chrY	HAVANA	exon	1239711	1239819	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000157073.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "processed_transcript"; transcript_name "Uty-211"; exon_number 3; exon_id "ENSMUSE00001294525.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081731.2";
mm10-chrY	HAVANA	exon	1224497	1224546	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000157073.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "processed_transcript"; transcript_name "Uty-211"; exon_number 4; exon_id "ENSMUSE00001304630.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081731.2";
mm10-chrY	HAVANA	exon	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000157073.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "processed_transcript"; transcript_name "Uty-211"; exon_number 5; exon_id "ENSMUSE00001240806.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081731.2";
mm10-chrY	HAVANA	exon	1186774	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000157073.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "processed_transcript"; transcript_name "Uty-211"; exon_number 6; exon_id "ENSMUSE00001218390.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081731.2";
mm10-chrY	HAVANA	exon	1176491	1176584	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000157073.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "processed_transcript"; transcript_name "Uty-211"; exon_number 7; exon_id "ENSMUSE00001257876.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081731.2";
mm10-chrY	HAVANA	exon	1174728	1174854	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000157073.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "processed_transcript"; transcript_name "Uty-211"; exon_number 8; exon_id "ENSMUSE00001312545.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081731.2";
mm10-chrY	HAVANA	exon	1172547	1173828	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000157073.7"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "processed_transcript"; transcript_name "Uty-211"; exon_number 9; exon_id "ENSMUSE00000789432.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081731.2";
mm10-chrY	HAVANA	transcript	1186777	1245467	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	exon	1245407	1245467	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 1; exon_id "ENSMUSE00000774033.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	CDS	1245407	1245467	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 1; exon_id "ENSMUSE00000774033.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	exon	1245156	1245219	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 2; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	CDS	1245156	1245219	.	-	1	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 2; exon_id "ENSMUSE00001288509.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	exon	1239711	1239819	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 3; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	CDS	1239711	1239819	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 3; exon_id "ENSMUSE00001219897.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	exon	1199455	1199513	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 4; exon_id "ENSMUSE00001268169.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	CDS	1199455	1199513	.	-	2	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 4; exon_id "ENSMUSE00001268169.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	exon	1197206	1197326	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 5; exon_id "ENSMUSE00001253723.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	CDS	1197321	1197326	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 5; exon_id "ENSMUSE00001253723.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	stop_codon	1197318	1197320	.	-	0	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 5; exon_id "ENSMUSE00001253723.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	exon	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 6; exon_id "ENSMUSE00001240806.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	exon	1186777	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 7; exon_id "ENSMUSE00000787696.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	UTR	1197206	1197320	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 5; exon_id "ENSMUSE00001253723.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	UTR	1189336	1189390	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 6; exon_id "ENSMUSE00001240806.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	UTR	1186777	1186808	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000150715.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "nonsense_mediated_decay"; transcript_name "Uty-207"; exon_number 7; exon_id "ENSMUSE00000787696.1"; level 2; protein_id "ENSMUSP00000116372.1"; transcript_support_level "3"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081749.1";
mm10-chrY	HAVANA	transcript	1199297	1245739	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154527.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-209"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081747.1";
mm10-chrY	HAVANA	exon	1245513	1245739	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154527.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-209"; exon_number 1; exon_id "ENSMUSE00000822011.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081747.1";
mm10-chrY	HAVANA	exon	1245156	1245219	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154527.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-209"; exon_number 2; exon_id "ENSMUSE00001280821.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081747.1";
mm10-chrY	HAVANA	exon	1239711	1239819	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154527.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-209"; exon_number 3; exon_id "ENSMUSE00001294525.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081747.1";
mm10-chrY	HAVANA	exon	1224497	1224546	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154527.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-209"; exon_number 4; exon_id "ENSMUSE00001304630.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081747.1";
mm10-chrY	HAVANA	exon	1199297	1199513	.	-	.	gene_id "ENSMUSG00000068457.14"; transcript_id "ENSMUST00000154527.1"; gene_type "protein_coding"; gene_name "Uty"; transcript_type "retained_intron"; transcript_name "Uty-209"; exon_number 5; exon_id "ENSMUSE00000782247.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000032814.5"; havana_transcript "OTTMUST00000081747.1";
mm10-chrY	HAVANA	gene	1260771	1286629	.	-	.	gene_id "ENSMUSG00000069045.11"; gene_type "protein_coding"; gene_name "Ddx3y"; level 2; tag "overlapping_locus"; havana_gene "OTTMUSG00000045279.1";
mm10-chrY	HAVANA	transcript	1260771	1286629	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1286479	1286629	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 1; exon_id "ENSMUSE00000568581.6"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1286479	1286523	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 1; exon_id "ENSMUSE00000568581.6"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	start_codon	1286521	1286523	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 1; exon_id "ENSMUSE00000568581.6"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1284322	1284382	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 2; exon_id "ENSMUSE00000568580.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1284322	1284382	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 2; exon_id "ENSMUSE00000568580.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1282901	1282948	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 3; exon_id "ENSMUSE00000568579.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1282901	1282948	.	-	2	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 3; exon_id "ENSMUSE00000568579.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1280310	1280439	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 4; exon_id "ENSMUSE00000568575.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1280310	1280439	.	-	2	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 4; exon_id "ENSMUSE00000568575.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1279423	1279578	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 5; exon_id "ENSMUSE00000568572.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1279423	1279578	.	-	1	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 5; exon_id "ENSMUSE00000568572.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1278897	1278996	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 6; exon_id "ENSMUSE00000568571.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1278897	1278996	.	-	1	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 6; exon_id "ENSMUSE00000568571.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1269705	1269840	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 7; exon_id "ENSMUSE00000568567.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1269705	1269840	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 7; exon_id "ENSMUSE00000568567.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1267103	1267188	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 8; exon_id "ENSMUSE00000568565.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1267103	1267188	.	-	2	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 8; exon_id "ENSMUSE00000568565.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1266595	1266693	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 9; exon_id "ENSMUSE00000568561.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1266595	1266693	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 9; exon_id "ENSMUSE00000568561.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1266359	1266519	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 10; exon_id "ENSMUSE00000568557.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1266359	1266519	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 10; exon_id "ENSMUSE00000568557.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1265829	1265973	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 11; exon_id "ENSMUSE00000568554.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1265829	1265973	.	-	1	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 11; exon_id "ENSMUSE00000568554.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1265575	1265719	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 12; exon_id "ENSMUSE00000568553.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1265575	1265719	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 12; exon_id "ENSMUSE00000568553.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1265028	1265209	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 13; exon_id "ENSMUSE00000568552.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1265028	1265209	.	-	2	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 13; exon_id "ENSMUSE00000568552.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1264841	1264958	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 14; exon_id "ENSMUSE00000568551.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1264841	1264958	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 14; exon_id "ENSMUSE00000568551.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1263796	1263949	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 15; exon_id "ENSMUSE00000568550.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1263796	1263949	.	-	2	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 15; exon_id "ENSMUSE00000568550.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1263570	1263700	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 16; exon_id "ENSMUSE00000568549.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1263570	1263700	.	-	1	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 16; exon_id "ENSMUSE00000568549.1"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	exon	1260771	1263367	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 17; exon_id "ENSMUSE00000568548.6"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	CDS	1263291	1263367	.	-	2	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 17; exon_id "ENSMUSE00000568548.6"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	stop_codon	1263288	1263290	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 17; exon_id "ENSMUSE00000568548.6"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	UTR	1286524	1286629	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 1; exon_id "ENSMUSE00000568581.6"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	UTR	1260771	1263290	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000091190.11"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "protein_coding"; transcript_name "Ddx3y-201"; exon_number 17; exon_id "ENSMUSE00000568548.6"; level 2; protein_id "ENSMUSP00000088729.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30543.1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118924.1";
mm10-chrY	HAVANA	transcript	1260772	1265031	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188182.6"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "retained_intron"; transcript_name "Ddx3y-203"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118925.1";
mm10-chrY	HAVANA	exon	1264841	1265031	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188182.6"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "retained_intron"; transcript_name "Ddx3y-203"; exon_number 1; exon_id "ENSMUSE00001332974.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118925.1";
mm10-chrY	HAVANA	exon	1263796	1263949	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188182.6"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "retained_intron"; transcript_name "Ddx3y-203"; exon_number 2; exon_id "ENSMUSE00001325323.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118925.1";
mm10-chrY	HAVANA	exon	1263570	1263700	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188182.6"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "retained_intron"; transcript_name "Ddx3y-203"; exon_number 3; exon_id "ENSMUSE00001322365.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118925.1";
mm10-chrY	HAVANA	exon	1260772	1263367	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188182.6"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "retained_intron"; transcript_name "Ddx3y-203"; exon_number 4; exon_id "ENSMUSE00001320308.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118925.1";
mm10-chrY	HAVANA	transcript	1262313	1286582	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1286479	1286582	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 1; exon_id "ENSMUSE00001326579.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	CDS	1286479	1286523	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 1; exon_id "ENSMUSE00001326579.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	start_codon	1286521	1286523	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 1; exon_id "ENSMUSE00001326579.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1284322	1284382	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 2; exon_id "ENSMUSE00000568580.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	CDS	1284322	1284382	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 2; exon_id "ENSMUSE00000568580.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1282901	1282968	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 3; exon_id "ENSMUSE00001318166.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	CDS	1282952	1282968	.	-	2	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 3; exon_id "ENSMUSE00001318166.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	stop_codon	1282949	1282951	.	-	0	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 3; exon_id "ENSMUSE00001318166.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1280310	1280439	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 4; exon_id "ENSMUSE00001333740.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1279423	1279578	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 5; exon_id "ENSMUSE00001322045.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1278897	1278996	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 6; exon_id "ENSMUSE00001323925.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1269705	1269840	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 7; exon_id "ENSMUSE00001334603.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1267103	1267188	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 8; exon_id "ENSMUSE00001329869.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1266595	1266693	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 9; exon_id "ENSMUSE00001322882.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1266359	1266519	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 10; exon_id "ENSMUSE00001332543.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1265829	1265973	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 11; exon_id "ENSMUSE00001330886.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1265575	1265719	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 12; exon_id "ENSMUSE00001335168.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1265028	1265209	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 13; exon_id "ENSMUSE00001323584.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1264841	1264958	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 14; exon_id "ENSMUSE00001321052.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1263796	1263949	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 15; exon_id "ENSMUSE00001325323.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1263570	1263700	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 16; exon_id "ENSMUSE00001322365.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	exon	1262313	1263367	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 17; exon_id "ENSMUSE00001319105.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1286524	1286582	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 1; exon_id "ENSMUSE00001326579.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1282901	1282951	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 3; exon_id "ENSMUSE00001318166.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1280310	1280439	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 4; exon_id "ENSMUSE00001333740.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1279423	1279578	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 5; exon_id "ENSMUSE00001322045.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1278897	1278996	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 6; exon_id "ENSMUSE00001323925.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1269705	1269840	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 7; exon_id "ENSMUSE00001334603.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1267103	1267188	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 8; exon_id "ENSMUSE00001329869.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1266595	1266693	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 9; exon_id "ENSMUSE00001322882.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1266359	1266519	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 10; exon_id "ENSMUSE00001332543.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1265829	1265973	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 11; exon_id "ENSMUSE00001330886.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1265575	1265719	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 12; exon_id "ENSMUSE00001335168.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1265028	1265209	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 13; exon_id "ENSMUSE00001323584.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1264841	1264958	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 14; exon_id "ENSMUSE00001321052.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1263796	1263949	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 15; exon_id "ENSMUSE00001325323.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1263570	1263700	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 16; exon_id "ENSMUSE00001322365.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	UTR	1262313	1263367	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000188484.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "nonsense_mediated_decay"; transcript_name "Ddx3y-204"; exon_number 17; exon_id "ENSMUSE00001319105.1"; level 2; protein_id "ENSMUSP00000140361.1"; transcript_support_level "1"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118926.1";
mm10-chrY	HAVANA	transcript	1263796	1264459	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000187596.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "retained_intron"; transcript_name "Ddx3y-202"; level 2; transcript_support_level "NA"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118927.1";
mm10-chrY	HAVANA	exon	1263796	1264459	.	-	.	gene_id "ENSMUSG00000069045.11"; transcript_id "ENSMUST00000187596.1"; gene_type "protein_coding"; gene_name "Ddx3y"; transcript_type "retained_intron"; transcript_name "Ddx3y-202"; exon_number 1; exon_id "ENSMUSE00001324027.1"; level 2; transcript_support_level "NA"; havana_gene "OTTMUSG00000045279.1"; havana_transcript "OTTMUST00000118927.1";
mm10-chrY	HAVANA	gene	1268548	1268885	.	-	.	gene_id "ENSMUSG00000101059.1"; gene_type "processed_pseudogene"; gene_name "Gm4017"; level 1; tag "pseudo_consens"; tag "overlapping_locus"; havana_gene "OTTMUSG00000045280.1";
mm10-chrY	HAVANA	transcript	1268548	1268885	.	-	.	gene_id "ENSMUSG00000101059.1"; transcript_id "ENSMUST00000084813.2"; gene_type "processed_pseudogene"; gene_name "Gm4017"; transcript_type "processed_pseudogene"; transcript_name "Gm4017-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045280.1"; havana_transcript "OTTMUST00000118928.1";
mm10-chrY	HAVANA	exon	1268548	1268885	.	-	.	gene_id "ENSMUSG00000101059.1"; transcript_id "ENSMUST00000084813.2"; gene_type "processed_pseudogene"; gene_name "Gm4017"; transcript_type "processed_pseudogene"; transcript_name "Gm4017-201"; exon_number 1; exon_id "ENSMUSE00000528502.2"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045280.1"; havana_transcript "OTTMUST00000118928.1";
mm10-chrY	HAVANA	gene	1277313	1277582	.	-	.	gene_id "ENSMUSG00000099809.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18665"; level 1; tag "pseudo_consens"; tag "overlapping_locus"; havana_gene "OTTMUSG00000045281.1";
mm10-chrY	HAVANA	transcript	1277313	1277582	.	-	.	gene_id "ENSMUSG00000099809.1"; transcript_id "ENSMUST00000189783.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18665"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18665-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045281.1"; havana_transcript "OTTMUST00000118929.1";
mm10-chrY	HAVANA	exon	1277313	1277582	.	-	.	gene_id "ENSMUSG00000099809.1"; transcript_id "ENSMUST00000189783.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18665"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18665-201"; exon_number 1; exon_id "ENSMUSE00001322888.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045281.1"; havana_transcript "OTTMUST00000118929.1";
mm10-chrY	HAVANA	gene	1298961	1459782	.	-	.	gene_id "ENSMUSG00000069044.6"; gene_type "protein_coding"; gene_name "Usp9y"; level 2; tag "ncRNA_host"; havana_gene "OTTMUSG00000026255.2";
mm10-chrY	HAVANA	transcript	1298961	1459782	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1459523	1459782	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 1; exon_id "ENSMUSE00000647292.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1458886	1458920	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 2; exon_id "ENSMUSE00000647291.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1454608	1454684	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 3; exon_id "ENSMUSE00000647290.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1454170	1454311	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 4; exon_id "ENSMUSE00000557453.3"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1454170	1454265	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 4; exon_id "ENSMUSE00000557453.3"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	start_codon	1454263	1454265	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 4; exon_id "ENSMUSE00000557453.3"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1448851	1448996	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 5; exon_id "ENSMUSE00000626493.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1448851	1448996	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 5; exon_id "ENSMUSE00000626493.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1446830	1446909	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 6; exon_id "ENSMUSE00000626492.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1446830	1446909	.	-	1	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 6; exon_id "ENSMUSE00000626492.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1444503	1444615	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 7; exon_id "ENSMUSE00000626491.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1444503	1444615	.	-	2	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 7; exon_id "ENSMUSE00000626491.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1442385	1442603	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 8; exon_id "ENSMUSE00000626490.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1442385	1442603	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 8; exon_id "ENSMUSE00000626490.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1435259	1435374	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 9; exon_id "ENSMUSE00000626489.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1435259	1435374	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 9; exon_id "ENSMUSE00000626489.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1434806	1435057	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 10; exon_id "ENSMUSE00000626488.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1434806	1435057	.	-	1	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 10; exon_id "ENSMUSE00000626488.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1434303	1434438	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 11; exon_id "ENSMUSE00000626487.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1434303	1434438	.	-	1	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 11; exon_id "ENSMUSE00000626487.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1432173	1432325	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 12; exon_id "ENSMUSE00000626486.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1432173	1432325	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 12; exon_id "ENSMUSE00000626486.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1412418	1412522	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 13; exon_id "ENSMUSE00000626485.2"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1412418	1412522	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 13; exon_id "ENSMUSE00000626485.2"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1395610	1395816	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 14; exon_id "ENSMUSE00000647288.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1395610	1395816	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 14; exon_id "ENSMUSE00000647288.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1393969	1394105	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 15; exon_id "ENSMUSE00000647286.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1393969	1394105	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 15; exon_id "ENSMUSE00000647286.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1391275	1391408	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 16; exon_id "ENSMUSE00000647284.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1391275	1391408	.	-	1	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 16; exon_id "ENSMUSE00000647284.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1385270	1385357	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 17; exon_id "ENSMUSE00000626480.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1385270	1385357	.	-	2	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 17; exon_id "ENSMUSE00000626480.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1384192	1384534	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 18; exon_id "ENSMUSE00000626479.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1384192	1384534	.	-	1	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 18; exon_id "ENSMUSE00000626479.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1383316	1383411	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 19; exon_id "ENSMUSE00000626478.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1383316	1383411	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 19; exon_id "ENSMUSE00000626478.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1381184	1381398	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 20; exon_id "ENSMUSE00000626477.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1381184	1381398	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 20; exon_id "ENSMUSE00000626477.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1368028	1368268	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 21; exon_id "ENSMUSE00000626476.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1368028	1368268	.	-	1	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 21; exon_id "ENSMUSE00000626476.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1367056	1367208	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 22; exon_id "ENSMUSE00000626475.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1367056	1367208	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 22; exon_id "ENSMUSE00000626475.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1364661	1364781	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 23; exon_id "ENSMUSE00000626474.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1364661	1364781	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 23; exon_id "ENSMUSE00000626474.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1356734	1356864	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 24; exon_id "ENSMUSE00000568545.2"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1356734	1356864	.	-	2	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 24; exon_id "ENSMUSE00000568545.2"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1356139	1356417	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 25; exon_id "ENSMUSE00000568544.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1356139	1356417	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 25; exon_id "ENSMUSE00000568544.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1352150	1352275	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 26; exon_id "ENSMUSE00000568543.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1352150	1352275	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 26; exon_id "ENSMUSE00000568543.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1351862	1351987	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 27; exon_id "ENSMUSE00000568541.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1351862	1351987	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 27; exon_id "ENSMUSE00000568541.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1350526	1350695	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 28; exon_id "ENSMUSE00000568540.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1350526	1350695	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 28; exon_id "ENSMUSE00000568540.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1341772	1341880	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 29; exon_id "ENSMUSE00000568538.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1341772	1341880	.	-	1	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 29; exon_id "ENSMUSE00000568538.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1341421	1341567	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 30; exon_id "ENSMUSE00000568537.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1341421	1341567	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 30; exon_id "ENSMUSE00000568537.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1339992	1340138	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 31; exon_id "ENSMUSE00000568536.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1339992	1340138	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 31; exon_id "ENSMUSE00000568536.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1336264	1336486	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 32; exon_id "ENSMUSE00000568534.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1336264	1336486	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 32; exon_id "ENSMUSE00000568534.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1333614	1333834	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 33; exon_id "ENSMUSE00000568533.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1333614	1333834	.	-	2	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 33; exon_id "ENSMUSE00000568533.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1332321	1332511	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 34; exon_id "ENSMUSE00000568530.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1332321	1332511	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 34; exon_id "ENSMUSE00000568530.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1324859	1325032	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 35; exon_id "ENSMUSE00000568528.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1324859	1325032	.	-	1	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 35; exon_id "ENSMUSE00000568528.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1319057	1319198	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 36; exon_id "ENSMUSE00000568526.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1319057	1319198	.	-	1	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 36; exon_id "ENSMUSE00000568526.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1316463	1317210	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 37; exon_id "ENSMUSE00000568523.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1316463	1317210	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 37; exon_id "ENSMUSE00000568523.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1315925	1316048	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 38; exon_id "ENSMUSE00000568521.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1315925	1316048	.	-	2	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 38; exon_id "ENSMUSE00000568521.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1314563	1314800	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 39; exon_id "ENSMUSE00000568518.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1314563	1314800	.	-	1	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 39; exon_id "ENSMUSE00000568518.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1313728	1313857	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 40; exon_id "ENSMUSE00000568516.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1313728	1313857	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 40; exon_id "ENSMUSE00000568516.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1310510	1310695	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 41; exon_id "ENSMUSE00000568513.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1310510	1310695	.	-	2	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 41; exon_id "ENSMUSE00000568513.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1307851	1308071	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 42; exon_id "ENSMUSE00000568510.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1307851	1308071	.	-	2	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 42; exon_id "ENSMUSE00000568510.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1307680	1307768	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 43; exon_id "ENSMUSE00000568509.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1307680	1307768	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 43; exon_id "ENSMUSE00000568509.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1304613	1304769	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 44; exon_id "ENSMUSE00000568507.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1304613	1304769	.	-	1	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 44; exon_id "ENSMUSE00000568507.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1304286	1304498	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 45; exon_id "ENSMUSE00000568505.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1304286	1304498	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 45; exon_id "ENSMUSE00000568505.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1303373	1303468	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 46; exon_id "ENSMUSE00000568504.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1303373	1303468	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 46; exon_id "ENSMUSE00000568504.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	exon	1298961	1299097	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 47; exon_id "ENSMUSE00000568502.5"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	CDS	1298969	1299097	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 47; exon_id "ENSMUSE00000568502.5"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	stop_codon	1298966	1298968	.	-	0	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 47; exon_id "ENSMUSE00000568502.5"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	UTR	1459523	1459782	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 1; exon_id "ENSMUSE00000647292.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	UTR	1458886	1458920	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 2; exon_id "ENSMUSE00000647291.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	UTR	1454608	1454684	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 3; exon_id "ENSMUSE00000647290.1"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	UTR	1454266	1454311	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 4; exon_id "ENSMUSE00000557453.3"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	HAVANA	UTR	1298961	1298968	.	-	.	gene_id "ENSMUSG00000069044.6"; transcript_id "ENSMUST00000091188.6"; gene_type "protein_coding"; gene_name "Usp9y"; transcript_type "protein_coding"; transcript_name "Usp9y-201"; exon_number 47; exon_id "ENSMUSE00000568502.5"; level 2; protein_id "ENSMUSP00000088727.5"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30544.1"; havana_gene "OTTMUSG00000026255.2"; havana_transcript "OTTMUST00000064932.2";
mm10-chrY	ENSEMBL	gene	1308273	1308377	.	-	.	gene_id "ENSMUSG00000077793.1"; gene_type "snRNA"; gene_name "Gm25565"; level 3;
mm10-chrY	ENSEMBL	transcript	1308273	1308377	.	-	.	gene_id "ENSMUSG00000077793.1"; transcript_id "ENSMUST00000104605.1"; gene_type "snRNA"; gene_name "Gm25565"; transcript_type "snRNA"; transcript_name "Gm25565-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	1308273	1308377	.	-	.	gene_id "ENSMUSG00000077793.1"; transcript_id "ENSMUST00000104605.1"; gene_type "snRNA"; gene_name "Gm25565"; transcript_type "snRNA"; transcript_name "Gm25565-201"; exon_number 1; exon_id "ENSMUSE00000664758.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	1736187	1737414	.	+	.	gene_id "ENSMUSG00000100842.1"; gene_type "processed_pseudogene"; gene_name "Gm17790"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045289.1";
mm10-chrY	HAVANA	transcript	1736187	1737414	.	+	.	gene_id "ENSMUSG00000100842.1"; transcript_id "ENSMUST00000191545.1"; gene_type "processed_pseudogene"; gene_name "Gm17790"; transcript_type "processed_pseudogene"; transcript_name "Gm17790-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045289.1"; havana_transcript "OTTMUST00000118940.1";
mm10-chrY	HAVANA	exon	1736187	1737414	.	+	.	gene_id "ENSMUSG00000100842.1"; transcript_id "ENSMUST00000191545.1"; gene_type "processed_pseudogene"; gene_name "Gm17790"; transcript_type "processed_pseudogene"; transcript_name "Gm17790-201"; exon_number 1; exon_id "ENSMUSE00001323648.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045289.1"; havana_transcript "OTTMUST00000118940.1";
mm10-chrY	HAVANA	gene	1788576	1789167	.	+	.	gene_id "ENSMUSG00000101947.1"; gene_type "processed_pseudogene"; gene_name "Gm29167"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045290.1";
mm10-chrY	HAVANA	transcript	1788576	1789167	.	+	.	gene_id "ENSMUSG00000101947.1"; transcript_id "ENSMUST00000190024.1"; gene_type "processed_pseudogene"; gene_name "Gm29167"; transcript_type "processed_pseudogene"; transcript_name "Gm29167-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045290.1"; havana_transcript "OTTMUST00000118941.1";
mm10-chrY	HAVANA	exon	1788576	1788756	.	+	.	gene_id "ENSMUSG00000101947.1"; transcript_id "ENSMUST00000190024.1"; gene_type "processed_pseudogene"; gene_name "Gm29167"; transcript_type "processed_pseudogene"; transcript_name "Gm29167-201"; exon_number 1; exon_id "ENSMUSE00001330794.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045290.1"; havana_transcript "OTTMUST00000118941.1";
mm10-chrY	HAVANA	exon	1788972	1789167	.	+	.	gene_id "ENSMUSG00000101947.1"; transcript_id "ENSMUST00000190024.1"; gene_type "processed_pseudogene"; gene_name "Gm29167"; transcript_type "processed_pseudogene"; transcript_name "Gm29167-201"; exon_number 2; exon_id "ENSMUSE00001332501.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045290.1"; havana_transcript "OTTMUST00000118941.1";
mm10-chrY	HAVANA	gene	1946919	1973442	.	+	.	gene_id "ENSMUSG00000100619.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8446"; level 2; havana_gene "OTTMUSG00000045291.1";
mm10-chrY	HAVANA	transcript	1946919	1973442	.	+	.	gene_id "ENSMUSG00000100619.1"; transcript_id "ENSMUST00000188834.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8446"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8446-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045291.1"; havana_transcript "OTTMUST00000118942.1";
mm10-chrY	HAVANA	exon	1946919	1947007	.	+	.	gene_id "ENSMUSG00000100619.1"; transcript_id "ENSMUST00000188834.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8446"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8446-201"; exon_number 1; exon_id "ENSMUSE00001332648.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045291.1"; havana_transcript "OTTMUST00000118942.1";
mm10-chrY	HAVANA	exon	1948667	1948752	.	+	.	gene_id "ENSMUSG00000100619.1"; transcript_id "ENSMUST00000188834.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8446"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8446-201"; exon_number 2; exon_id "ENSMUSE00001330612.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045291.1"; havana_transcript "OTTMUST00000118942.1";
mm10-chrY	HAVANA	exon	1951672	1951782	.	+	.	gene_id "ENSMUSG00000100619.1"; transcript_id "ENSMUST00000188834.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8446"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8446-201"; exon_number 3; exon_id "ENSMUSE00001318806.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045291.1"; havana_transcript "OTTMUST00000118942.1";
mm10-chrY	HAVANA	exon	1959606	1959752	.	+	.	gene_id "ENSMUSG00000100619.1"; transcript_id "ENSMUST00000188834.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8446"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8446-201"; exon_number 4; exon_id "ENSMUSE00001330268.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045291.1"; havana_transcript "OTTMUST00000118942.1";
mm10-chrY	HAVANA	exon	1961103	1962586	.	+	.	gene_id "ENSMUSG00000100619.1"; transcript_id "ENSMUST00000188834.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8446"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8446-201"; exon_number 5; exon_id "ENSMUSE00001335942.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045291.1"; havana_transcript "OTTMUST00000118942.1";
mm10-chrY	HAVANA	exon	1963352	1963443	.	+	.	gene_id "ENSMUSG00000100619.1"; transcript_id "ENSMUST00000188834.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8446"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8446-201"; exon_number 6; exon_id "ENSMUSE00001323654.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045291.1"; havana_transcript "OTTMUST00000118942.1";
mm10-chrY	HAVANA	exon	1972740	1973442	.	+	.	gene_id "ENSMUSG00000100619.1"; transcript_id "ENSMUST00000188834.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8446"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8446-201"; exon_number 7; exon_id "ENSMUSE00001319580.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045291.1"; havana_transcript "OTTMUST00000118942.1";
mm10-chrY	HAVANA	gene	2004144	2004819	.	+	.	gene_id "ENSMUSG00000100877.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28534"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045367.1";
mm10-chrY	HAVANA	transcript	2004144	2004819	.	+	.	gene_id "ENSMUSG00000100877.1"; transcript_id "ENSMUST00000187744.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28534"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28534-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045367.1"; havana_transcript "OTTMUST00000119095.1";
mm10-chrY	HAVANA	exon	2004144	2004819	.	+	.	gene_id "ENSMUSG00000100877.1"; transcript_id "ENSMUST00000187744.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28534"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28534-201"; exon_number 1; exon_id "ENSMUSE00001328805.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045367.1"; havana_transcript "OTTMUST00000119095.1";
mm10-chrY	HAVANA	gene	2061234	2061919	.	-	.	gene_id "ENSMUSG00000100576.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28975"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045368.1";
mm10-chrY	HAVANA	transcript	2061234	2061919	.	-	.	gene_id "ENSMUSG00000100576.1"; transcript_id "ENSMUST00000186412.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28975"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28975-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045368.1"; havana_transcript "OTTMUST00000119096.1";
mm10-chrY	HAVANA	exon	2061234	2061919	.	-	.	gene_id "ENSMUSG00000100576.1"; transcript_id "ENSMUST00000186412.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28975"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28975-201"; exon_number 1; exon_id "ENSMUSE00001334701.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045368.1"; havana_transcript "OTTMUST00000119096.1";
mm10-chrY	HAVANA	gene	2076580	2076810	.	+	.	gene_id "ENSMUSG00000100326.1"; gene_type "processed_pseudogene"; gene_name "Gm28974"; level 2; havana_gene "OTTMUSG00000045369.1";
mm10-chrY	HAVANA	transcript	2076580	2076810	.	+	.	gene_id "ENSMUSG00000100326.1"; transcript_id "ENSMUST00000187893.1"; gene_type "processed_pseudogene"; gene_name "Gm28974"; transcript_type "processed_pseudogene"; transcript_name "Gm28974-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045369.1"; havana_transcript "OTTMUST00000119097.1";
mm10-chrY	HAVANA	exon	2076580	2076810	.	+	.	gene_id "ENSMUSG00000100326.1"; transcript_id "ENSMUST00000187893.1"; gene_type "processed_pseudogene"; gene_name "Gm28974"; transcript_type "processed_pseudogene"; transcript_name "Gm28974-201"; exon_number 1; exon_id "ENSMUSE00001334604.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045369.1"; havana_transcript "OTTMUST00000119097.1";
mm10-chrY	HAVANA	gene	2078596	2085281	.	+	.	gene_id "ENSMUSG00000100356.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18797"; level 2; havana_gene "OTTMUSG00000045370.1";
mm10-chrY	HAVANA	transcript	2078596	2085281	.	+	.	gene_id "ENSMUSG00000100356.1"; transcript_id "ENSMUST00000190809.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18797-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045370.1"; havana_transcript "OTTMUST00000119098.1";
mm10-chrY	HAVANA	exon	2078596	2078661	.	+	.	gene_id "ENSMUSG00000100356.1"; transcript_id "ENSMUST00000190809.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18797-201"; exon_number 1; exon_id "ENSMUSE00001318201.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045370.1"; havana_transcript "OTTMUST00000119098.1";
mm10-chrY	HAVANA	exon	2080862	2080952	.	+	.	gene_id "ENSMUSG00000100356.1"; transcript_id "ENSMUST00000190809.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18797-201"; exon_number 2; exon_id "ENSMUSE00001330859.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045370.1"; havana_transcript "OTTMUST00000119098.1";
mm10-chrY	HAVANA	exon	2081050	2081196	.	+	.	gene_id "ENSMUSG00000100356.1"; transcript_id "ENSMUST00000190809.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18797-201"; exon_number 3; exon_id "ENSMUSE00001331860.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045370.1"; havana_transcript "OTTMUST00000119098.1";
mm10-chrY	HAVANA	exon	2081310	2081486	.	+	.	gene_id "ENSMUSG00000100356.1"; transcript_id "ENSMUST00000190809.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18797-201"; exon_number 4; exon_id "ENSMUSE00001332418.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045370.1"; havana_transcript "OTTMUST00000119098.1";
mm10-chrY	HAVANA	exon	2081589	2081693	.	+	.	gene_id "ENSMUSG00000100356.1"; transcript_id "ENSMUST00000190809.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18797-201"; exon_number 5; exon_id "ENSMUSE00001329225.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045370.1"; havana_transcript "OTTMUST00000119098.1";
mm10-chrY	HAVANA	exon	2081782	2081862	.	+	.	gene_id "ENSMUSG00000100356.1"; transcript_id "ENSMUST00000190809.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18797-201"; exon_number 6; exon_id "ENSMUSE00001329471.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045370.1"; havana_transcript "OTTMUST00000119098.1";
mm10-chrY	HAVANA	exon	2082182	2082343	.	+	.	gene_id "ENSMUSG00000100356.1"; transcript_id "ENSMUST00000190809.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18797-201"; exon_number 7; exon_id "ENSMUSE00001324090.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045370.1"; havana_transcript "OTTMUST00000119098.1";
mm10-chrY	HAVANA	exon	2084721	2084872	.	+	.	gene_id "ENSMUSG00000100356.1"; transcript_id "ENSMUST00000190809.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18797-201"; exon_number 8; exon_id "ENSMUSE00001329067.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045370.1"; havana_transcript "OTTMUST00000119098.1";
mm10-chrY	HAVANA	exon	2085089	2085281	.	+	.	gene_id "ENSMUSG00000100356.1"; transcript_id "ENSMUST00000190809.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18797-201"; exon_number 9; exon_id "ENSMUSE00001330192.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045370.1"; havana_transcript "OTTMUST00000119098.1";
mm10-chrY	HAVANA	gene	2095392	2095972	.	+	.	gene_id "ENSMUSG00000101443.1"; gene_type "processed_pseudogene"; gene_name "Rhoay-ps1"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045371.1";
mm10-chrY	HAVANA	transcript	2095392	2095972	.	+	.	gene_id "ENSMUSG00000101443.1"; transcript_id "ENSMUST00000191243.1"; gene_type "processed_pseudogene"; gene_name "Rhoay-ps1"; transcript_type "processed_pseudogene"; transcript_name "Rhoay-ps1-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045371.1"; havana_transcript "OTTMUST00000119099.1";
mm10-chrY	HAVANA	exon	2095392	2095972	.	+	.	gene_id "ENSMUSG00000101443.1"; transcript_id "ENSMUST00000191243.1"; gene_type "processed_pseudogene"; gene_name "Rhoay-ps1"; transcript_type "processed_pseudogene"; transcript_name "Rhoay-ps1-201"; exon_number 1; exon_id "ENSMUSE00001319602.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045371.1"; havana_transcript "OTTMUST00000119099.1";
mm10-chrY	HAVANA	gene	2106015	2170409	.	-	.	gene_id "ENSMUSG00000000103.12"; gene_type "protein_coding"; gene_name "Zfy2"; level 2; havana_gene "OTTMUSG00000045372.1";
mm10-chrY	HAVANA	transcript	2106015	2150346	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	exon	2150216	2150346	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 1; exon_id "ENSMUSE00001332057.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	exon	2150052	2150121	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 2; exon_id "ENSMUSE00000704561.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	exon	2133385	2133472	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 3; exon_id "ENSMUSE00000992753.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	CDS	2133385	2133445	.	-	0	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 3; exon_id "ENSMUSE00000992753.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	start_codon	2133443	2133445	.	-	0	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 3; exon_id "ENSMUSE00000992753.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	exon	2121279	2121830	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 4; exon_id "ENSMUSE00000984092.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	CDS	2121279	2121830	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 4; exon_id "ENSMUSE00000984092.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	exon	2117063	2117212	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 5; exon_id "ENSMUSE00001047922.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	CDS	2117063	2117212	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 5; exon_id "ENSMUSE00001047922.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	exon	2116135	2116275	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 6; exon_id "ENSMUSE00000704557.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	CDS	2116135	2116275	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 6; exon_id "ENSMUSE00000704557.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	exon	2109889	2110011	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 7; exon_id "ENSMUSE00001005853.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	CDS	2109889	2110011	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 7; exon_id "ENSMUSE00001005853.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	exon	2108491	2108631	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 8; exon_id "ENSMUSE00001089521.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	CDS	2108491	2108631	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 8; exon_id "ENSMUSE00001089521.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	exon	2106015	2107464	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 9; exon_id "ENSMUSE00001334440.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	CDS	2106302	2107464	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 9; exon_id "ENSMUSE00001334440.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	stop_codon	2106299	2106301	.	-	0	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 9; exon_id "ENSMUSE00001334440.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	UTR	2150216	2150346	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 1; exon_id "ENSMUSE00001332057.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	UTR	2150052	2150121	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 2; exon_id "ENSMUSE00000704561.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	UTR	2133446	2133472	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 3; exon_id "ENSMUSE00000992753.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	UTR	2106015	2106301	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000187148.6"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-202"; exon_number 9; exon_id "ENSMUSE00001334440.1"; level 2; protein_id "ENSMUSP00000139591.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119100.1";
mm10-chrY	HAVANA	transcript	2106175	2170409	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	exon	2170149	2170409	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 1; exon_id "ENSMUSE00000704562.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	exon	2150052	2150121	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 2; exon_id "ENSMUSE00000704561.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	exon	2133385	2133472	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 3; exon_id "ENSMUSE00000992753.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	CDS	2133385	2133445	.	-	0	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 3; exon_id "ENSMUSE00000992753.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	start_codon	2133443	2133445	.	-	0	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 3; exon_id "ENSMUSE00000992753.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	exon	2121279	2121830	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 4; exon_id "ENSMUSE00000984092.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	CDS	2121279	2121830	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 4; exon_id "ENSMUSE00000984092.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	exon	2117063	2117212	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 5; exon_id "ENSMUSE00001047922.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	CDS	2117063	2117212	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 5; exon_id "ENSMUSE00001047922.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	exon	2116135	2116275	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 6; exon_id "ENSMUSE00000704557.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	CDS	2116135	2116275	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 6; exon_id "ENSMUSE00000704557.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	exon	2109889	2110011	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 7; exon_id "ENSMUSE00001005853.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	CDS	2109889	2110011	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 7; exon_id "ENSMUSE00001005853.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	exon	2108491	2108631	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 8; exon_id "ENSMUSE00001089521.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	CDS	2108491	2108631	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 8; exon_id "ENSMUSE00001089521.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	exon	2106175	2107464	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 9; exon_id "ENSMUSE00000550150.3"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	CDS	2106302	2107464	.	-	2	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 9; exon_id "ENSMUSE00000550150.3"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	stop_codon	2106299	2106301	.	-	0	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 9; exon_id "ENSMUSE00000550150.3"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	UTR	2170149	2170409	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 1; exon_id "ENSMUSE00000704562.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	UTR	2150052	2150121	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 2; exon_id "ENSMUSE00000704561.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	UTR	2133446	2133472	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 3; exon_id "ENSMUSE00000992753.1"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	UTR	2106175	2106301	.	-	.	gene_id "ENSMUSG00000000103.12"; transcript_id "ENSMUST00000115891.1"; gene_type "protein_coding"; gene_name "Zfy2"; transcript_type "protein_coding"; transcript_name "Zfy2-201"; exon_number 9; exon_id "ENSMUSE00000550150.3"; level 2; protein_id "ENSMUSP00000111557.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS41217.1"; havana_gene "OTTMUSG00000045372.1"; havana_transcript "OTTMUST00000119101.1";
mm10-chrY	HAVANA	gene	2264257	2278687	.	+	.	gene_id "ENSMUSG00000099614.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; level 2; havana_gene "OTTMUSG00000045373.1";
mm10-chrY	HAVANA	transcript	2264257	2278687	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2264257	2264373	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 1; exon_id "ENSMUSE00001330466.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2264493	2264556	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 2; exon_id "ENSMUSE00001334194.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2264641	2264809	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 3; exon_id "ENSMUSE00001334724.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2264899	2265033	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 4; exon_id "ENSMUSE00001319727.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2265596	2265702	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 5; exon_id "ENSMUSE00001332317.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2265906	2265996	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 6; exon_id "ENSMUSE00001329418.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2267545	2267677	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 7; exon_id "ENSMUSE00001332198.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2269977	2270074	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 8; exon_id "ENSMUSE00001325623.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2270171	2270317	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 9; exon_id "ENSMUSE00001321950.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2270428	2270604	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 10; exon_id "ENSMUSE00001327038.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2270707	2270821	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 11; exon_id "ENSMUSE00001323970.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2270910	2270973	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 12; exon_id "ENSMUSE00001319125.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2271275	2271430	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 13; exon_id "ENSMUSE00001320441.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2273365	2273521	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 14; exon_id "ENSMUSE00001329116.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2273731	2273927	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 15; exon_id "ENSMUSE00001330068.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2275909	2275972	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 16; exon_id "ENSMUSE00001333794.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2276208	2276403	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 17; exon_id "ENSMUSE00001325898.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2276958	2277032	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 18; exon_id "ENSMUSE00001318173.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2277138	2277330	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 19; exon_id "ENSMUSE00001319167.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	exon	2278599	2278687	.	+	.	gene_id "ENSMUSG00000099614.1"; transcript_id "ENSMUST00000190871.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps2"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps2-201"; exon_number 20; exon_id "ENSMUSE00001332197.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045373.1"; havana_transcript "OTTMUST00000119102.1";
mm10-chrY	HAVANA	gene	2298529	2314624	.	-	.	gene_id "ENSMUSG00000099973.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; level 2; havana_gene "OTTMUSG00000045374.1";
mm10-chrY	HAVANA	transcript	2298529	2314624	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2314566	2314624	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 1; exon_id "ENSMUSE00001333950.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2309097	2309175	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 2; exon_id "ENSMUSE00001320154.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2306774	2306866	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 3; exon_id "ENSMUSE00001325018.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2306530	2306676	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 4; exon_id "ENSMUSE00001330932.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2306240	2306416	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 5; exon_id "ENSMUSE00001328980.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2306033	2306137	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 6; exon_id "ENSMUSE00001330629.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2305864	2305944	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 7; exon_id "ENSMUSE00001329812.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2305410	2305568	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 8; exon_id "ENSMUSE00001332985.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2302866	2303018	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 9; exon_id "ENSMUSE00001328783.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2302458	2302652	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 10; exon_id "ENSMUSE00001332564.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2300233	2300295	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 11; exon_id "ENSMUSE00001332729.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2299454	2299648	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 12; exon_id "ENSMUSE00001318916.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2298819	2298893	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 13; exon_id "ENSMUSE00001325095.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	exon	2298529	2298714	.	-	.	gene_id "ENSMUSG00000099973.1"; transcript_id "ENSMUST00000190440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18796-201"; exon_number 14; exon_id "ENSMUSE00001329706.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045374.1"; havana_transcript "OTTMUST00000119103.1";
mm10-chrY	HAVANA	gene	2325791	2326450	.	+	.	gene_id "ENSMUSG00000099888.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29552"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045375.1";
mm10-chrY	HAVANA	transcript	2325791	2326450	.	+	.	gene_id "ENSMUSG00000099888.1"; transcript_id "ENSMUST00000190548.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29552"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29552-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045375.1"; havana_transcript "OTTMUST00000119104.1";
mm10-chrY	HAVANA	exon	2325791	2326450	.	+	.	gene_id "ENSMUSG00000099888.1"; transcript_id "ENSMUST00000190548.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29552"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29552-201"; exon_number 1; exon_id "ENSMUSE00001335485.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045375.1"; havana_transcript "OTTMUST00000119104.1";
mm10-chrY	HAVANA	gene	2328880	2329287	.	+	.	gene_id "ENSMUSG00000100445.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29550"; level 2; havana_gene "OTTMUSG00000045376.1";
mm10-chrY	HAVANA	transcript	2328880	2329287	.	+	.	gene_id "ENSMUSG00000100445.1"; transcript_id "ENSMUST00000185543.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29550"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29550-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045376.1"; havana_transcript "OTTMUST00000119105.1";
mm10-chrY	HAVANA	exon	2328880	2328972	.	+	.	gene_id "ENSMUSG00000100445.1"; transcript_id "ENSMUST00000185543.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29550"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29550-201"; exon_number 1; exon_id "ENSMUSE00001330777.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045376.1"; havana_transcript "OTTMUST00000119105.1";
mm10-chrY	HAVANA	exon	2329096	2329287	.	+	.	gene_id "ENSMUSG00000100445.1"; transcript_id "ENSMUST00000185543.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29550"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29550-201"; exon_number 2; exon_id "ENSMUSE00001335641.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045376.1"; havana_transcript "OTTMUST00000119105.1";
mm10-chrY	HAVANA	gene	2336696	2337393	.	-	.	gene_id "ENSMUSG00000102072.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29551"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045377.1";
mm10-chrY	HAVANA	transcript	2336696	2337393	.	-	.	gene_id "ENSMUSG00000102072.1"; transcript_id "ENSMUST00000190913.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29551"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29551-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045377.1"; havana_transcript "OTTMUST00000119106.1";
mm10-chrY	HAVANA	exon	2336696	2337393	.	-	.	gene_id "ENSMUSG00000102072.1"; transcript_id "ENSMUST00000190913.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29551"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29551-201"; exon_number 1; exon_id "ENSMUSE00001321850.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045377.1"; havana_transcript "OTTMUST00000119106.1";
mm10-chrY	HAVANA	gene	2380664	2381361	.	-	.	gene_id "ENSMUSG00000101290.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8480"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045378.1";
mm10-chrY	HAVANA	transcript	2380664	2381361	.	-	.	gene_id "ENSMUSG00000101290.1"; transcript_id "ENSMUST00000190350.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8480"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8480-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045378.1"; havana_transcript "OTTMUST00000119107.1";
mm10-chrY	HAVANA	exon	2380664	2381361	.	-	.	gene_id "ENSMUSG00000101290.1"; transcript_id "ENSMUST00000190350.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8480"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8480-201"; exon_number 1; exon_id "ENSMUSE00001334842.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045378.1"; havana_transcript "OTTMUST00000119107.1";
mm10-chrY	HAVANA	gene	2397266	2397544	.	-	.	gene_id "ENSMUSG00000100103.1"; gene_type "processed_pseudogene"; gene_name "Gm29553"; level 2; havana_gene "OTTMUSG00000045379.1";
mm10-chrY	HAVANA	transcript	2397266	2397544	.	-	.	gene_id "ENSMUSG00000100103.1"; transcript_id "ENSMUST00000189692.1"; gene_type "processed_pseudogene"; gene_name "Gm29553"; transcript_type "processed_pseudogene"; transcript_name "Gm29553-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045379.1"; havana_transcript "OTTMUST00000119108.1";
mm10-chrY	HAVANA	exon	2397266	2397544	.	-	.	gene_id "ENSMUSG00000100103.1"; transcript_id "ENSMUST00000189692.1"; gene_type "processed_pseudogene"; gene_name "Gm29553"; transcript_type "processed_pseudogene"; transcript_name "Gm29553-201"; exon_number 1; exon_id "ENSMUSE00001335647.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045379.1"; havana_transcript "OTTMUST00000119108.1";
mm10-chrY	ENSEMBL	gene	2446010	2446108	.	-	.	gene_id "ENSMUSG00000093335.1"; gene_type "miRNA"; gene_name "Gm22119"; level 3;
mm10-chrY	ENSEMBL	transcript	2446010	2446108	.	-	.	gene_id "ENSMUSG00000093335.1"; transcript_id "ENSMUST00000175594.1"; gene_type "miRNA"; gene_name "Gm22119"; transcript_type "miRNA"; transcript_name "Gm22119-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	2446010	2446108	.	-	.	gene_id "ENSMUSG00000093335.1"; transcript_id "ENSMUST00000175594.1"; gene_type "miRNA"; gene_name "Gm22119"; transcript_type "miRNA"; transcript_name "Gm22119-201"; exon_number 1; exon_id "ENSMUSE00000946242.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	2552500	2552997	.	+	.	gene_id "ENSMUSG00000102120.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28630"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045380.1";
mm10-chrY	HAVANA	transcript	2552500	2552997	.	+	.	gene_id "ENSMUSG00000102120.1"; transcript_id "ENSMUST00000187806.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28630"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28630-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045380.1"; havana_transcript "OTTMUST00000119109.1";
mm10-chrY	HAVANA	exon	2552500	2552997	.	+	.	gene_id "ENSMUSG00000102120.1"; transcript_id "ENSMUST00000187806.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28630"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28630-201"; exon_number 1; exon_id "ENSMUSE00001327446.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045380.1"; havana_transcript "OTTMUST00000119109.1";
mm10-chrY	HAVANA	gene	2597674	2597936	.	+	.	gene_id "ENSMUSG00000099445.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28629"; level 2; havana_gene "OTTMUSG00000045381.1";
mm10-chrY	HAVANA	transcript	2597674	2597936	.	+	.	gene_id "ENSMUSG00000099445.1"; transcript_id "ENSMUST00000187309.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28629"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28629-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045381.1"; havana_transcript "OTTMUST00000119110.1";
mm10-chrY	HAVANA	exon	2597674	2597936	.	+	.	gene_id "ENSMUSG00000099445.1"; transcript_id "ENSMUST00000187309.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28629"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28629-201"; exon_number 1; exon_id "ENSMUSE00001321829.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045381.1"; havana_transcript "OTTMUST00000119110.1";
mm10-chrY	HAVANA	gene	2599099	2599434	.	+	.	gene_id "ENSMUSG00000094881.2"; gene_type "protein_coding"; gene_name "H2al2c"; level 2; havana_gene "OTTMUSG00000045382.1";
mm10-chrY	ENSEMBL	transcript	2599099	2599434	.	+	.	gene_id "ENSMUSG00000094881.2"; transcript_id "ENSMUST00000163651.1"; gene_type "protein_coding"; gene_name "H2al2c"; transcript_type "protein_coding"; transcript_name "H2al2c-201"; level 3; protein_id "ENSMUSP00000126567.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53250.1"; havana_gene "OTTMUSG00000045382.1";
mm10-chrY	ENSEMBL	exon	2599099	2599434	.	+	.	gene_id "ENSMUSG00000094881.2"; transcript_id "ENSMUST00000163651.1"; gene_type "protein_coding"; gene_name "H2al2c"; transcript_type "protein_coding"; transcript_name "H2al2c-201"; exon_number 1; exon_id "ENSMUSE00001051338.1"; level 3; protein_id "ENSMUSP00000126567.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53250.1"; havana_gene "OTTMUSG00000045382.1";
mm10-chrY	ENSEMBL	CDS	2599099	2599431	.	+	0	gene_id "ENSMUSG00000094881.2"; transcript_id "ENSMUST00000163651.1"; gene_type "protein_coding"; gene_name "H2al2c"; transcript_type "protein_coding"; transcript_name "H2al2c-201"; exon_number 1; exon_id "ENSMUSE00001051338.1"; level 3; protein_id "ENSMUSP00000126567.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53250.1"; havana_gene "OTTMUSG00000045382.1";
mm10-chrY	ENSEMBL	start_codon	2599099	2599101	.	+	0	gene_id "ENSMUSG00000094881.2"; transcript_id "ENSMUST00000163651.1"; gene_type "protein_coding"; gene_name "H2al2c"; transcript_type "protein_coding"; transcript_name "H2al2c-201"; exon_number 1; exon_id "ENSMUSE00001051338.1"; level 3; protein_id "ENSMUSP00000126567.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53250.1"; havana_gene "OTTMUSG00000045382.1";
mm10-chrY	ENSEMBL	stop_codon	2599432	2599434	.	+	0	gene_id "ENSMUSG00000094881.2"; transcript_id "ENSMUST00000163651.1"; gene_type "protein_coding"; gene_name "H2al2c"; transcript_type "protein_coding"; transcript_name "H2al2c-201"; exon_number 1; exon_id "ENSMUSE00001051338.1"; level 3; protein_id "ENSMUSP00000126567.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53250.1"; havana_gene "OTTMUSG00000045382.1";
mm10-chrY	ENSEMBL	UTR	2599432	2599434	.	+	.	gene_id "ENSMUSG00000094881.2"; transcript_id "ENSMUST00000163651.1"; gene_type "protein_coding"; gene_name "H2al2c"; transcript_type "protein_coding"; transcript_name "H2al2c-201"; exon_number 1; exon_id "ENSMUSE00001051338.1"; level 3; protein_id "ENSMUSP00000126567.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53250.1"; havana_gene "OTTMUSG00000045382.1";
mm10-chrY	HAVANA	transcript	2599103	2599380	.	+	.	gene_id "ENSMUSG00000094881.2"; transcript_id "ENSMUST00000185885.1"; gene_type "protein_coding"; gene_name "H2al2c"; transcript_type "unprocessed_pseudogene"; transcript_name "H2al2c-202"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; havana_gene "OTTMUSG00000045382.1"; havana_transcript "OTTMUST00000119111.1";
mm10-chrY	HAVANA	exon	2599103	2599380	.	+	.	gene_id "ENSMUSG00000094881.2"; transcript_id "ENSMUST00000185885.1"; gene_type "protein_coding"; gene_name "H2al2c"; transcript_type "unprocessed_pseudogene"; transcript_name "H2al2c-202"; exon_number 1; exon_id "ENSMUSE00001334649.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; havana_gene "OTTMUSG00000045382.1"; havana_transcript "OTTMUST00000119111.1";
mm10-chrY	HAVANA	gene	2637211	2647300	.	-	.	gene_id "ENSMUSG00000099748.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; level 2; havana_gene "OTTMUSG00000045383.1";
mm10-chrY	HAVANA	transcript	2637211	2647300	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2647184	2647300	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 1; exon_id "ENSMUSE00001332682.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2647006	2647062	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 2; exon_id "ENSMUSE00001322764.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2646758	2646926	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 3; exon_id "ENSMUSE00001331879.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2646538	2646671	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 4; exon_id "ENSMUSE00001330260.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2645874	2645980	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 5; exon_id "ENSMUSE00001321885.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2645577	2645667	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 6; exon_id "ENSMUSE00001333783.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2644608	2644740	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 7; exon_id "ENSMUSE00001329320.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2641269	2641433	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 8; exon_id "ENSMUSE00001334818.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2640859	2641055	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 9; exon_id "ENSMUSE00001321424.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2638585	2638649	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 10; exon_id "ENSMUSE00001320895.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2638151	2638349	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 11; exon_id "ENSMUSE00001333148.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2637515	2637589	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 12; exon_id "ENSMUSE00001328689.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	exon	2637211	2637409	.	-	.	gene_id "ENSMUSG00000099748.1"; transcript_id "ENSMUST00000188314.1"; gene_type "unprocessed_pseudogene"; gene_name "Uba1y-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Uba1y-ps1-201"; exon_number 13; exon_id "ENSMUSE00001327775.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045383.1"; havana_transcript "OTTMUST00000119112.1";
mm10-chrY	HAVANA	gene	2662471	2663658	.	-	.	gene_id "ENSMUSG00000069036.3"; gene_type "protein_coding"; gene_name "Sry"; level 2; havana_gene "OTTMUSG00000045384.2";
mm10-chrY	HAVANA	transcript	2662471	2663658	.	-	.	gene_id "ENSMUSG00000069036.3"; transcript_id "ENSMUST00000091178.1"; gene_type "protein_coding"; gene_name "Sry"; transcript_type "protein_coding"; transcript_name "Sry-201"; level 2; protein_id "ENSMUSP00000088717.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30545.1"; havana_gene "OTTMUSG00000045384.2"; havana_transcript "OTTMUST00000119113.2";
mm10-chrY	HAVANA	exon	2662471	2663658	.	-	.	gene_id "ENSMUSG00000069036.3"; transcript_id "ENSMUST00000091178.1"; gene_type "protein_coding"; gene_name "Sry"; transcript_type "protein_coding"; transcript_name "Sry-201"; exon_number 1; exon_id "ENSMUSE00000568450.1"; level 2; protein_id "ENSMUSP00000088717.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30545.1"; havana_gene "OTTMUSG00000045384.2"; havana_transcript "OTTMUST00000119113.2";
mm10-chrY	HAVANA	CDS	2662474	2663658	.	-	0	gene_id "ENSMUSG00000069036.3"; transcript_id "ENSMUST00000091178.1"; gene_type "protein_coding"; gene_name "Sry"; transcript_type "protein_coding"; transcript_name "Sry-201"; exon_number 1; exon_id "ENSMUSE00000568450.1"; level 2; protein_id "ENSMUSP00000088717.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30545.1"; havana_gene "OTTMUSG00000045384.2"; havana_transcript "OTTMUST00000119113.2";
mm10-chrY	HAVANA	start_codon	2663656	2663658	.	-	0	gene_id "ENSMUSG00000069036.3"; transcript_id "ENSMUST00000091178.1"; gene_type "protein_coding"; gene_name "Sry"; transcript_type "protein_coding"; transcript_name "Sry-201"; exon_number 1; exon_id "ENSMUSE00000568450.1"; level 2; protein_id "ENSMUSP00000088717.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30545.1"; havana_gene "OTTMUSG00000045384.2"; havana_transcript "OTTMUST00000119113.2";
mm10-chrY	HAVANA	stop_codon	2662471	2662473	.	-	0	gene_id "ENSMUSG00000069036.3"; transcript_id "ENSMUST00000091178.1"; gene_type "protein_coding"; gene_name "Sry"; transcript_type "protein_coding"; transcript_name "Sry-201"; exon_number 1; exon_id "ENSMUSE00000568450.1"; level 2; protein_id "ENSMUSP00000088717.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30545.1"; havana_gene "OTTMUSG00000045384.2"; havana_transcript "OTTMUST00000119113.2";
mm10-chrY	HAVANA	UTR	2662471	2662473	.	-	.	gene_id "ENSMUSG00000069036.3"; transcript_id "ENSMUST00000091178.1"; gene_type "protein_coding"; gene_name "Sry"; transcript_type "protein_coding"; transcript_name "Sry-201"; exon_number 1; exon_id "ENSMUSE00000568450.1"; level 2; protein_id "ENSMUSP00000088717.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30545.1"; havana_gene "OTTMUSG00000045384.2"; havana_transcript "OTTMUST00000119113.2";
mm10-chrY	HAVANA	gene	2678944	2689032	.	+	.	gene_id "ENSMUSG00000101064.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; level 2; havana_gene "OTTMUSG00000045385.1";
mm10-chrY	HAVANA	transcript	2678944	2689032	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2678944	2679060	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 1; exon_id "ENSMUSE00001334796.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2679182	2679238	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 2; exon_id "ENSMUSE00001327549.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2679318	2679486	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 3; exon_id "ENSMUSE00001324281.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2679573	2679706	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 4; exon_id "ENSMUSE00001323267.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2680264	2680370	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 5; exon_id "ENSMUSE00001326498.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2680577	2680667	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 6; exon_id "ENSMUSE00001325857.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2681506	2681638	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 7; exon_id "ENSMUSE00001333878.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2684818	2684982	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 8; exon_id "ENSMUSE00001332000.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2685196	2685392	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 9; exon_id "ENSMUSE00001327874.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2687602	2687666	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 10; exon_id "ENSMUSE00001320076.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2687902	2688100	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 11; exon_id "ENSMUSE00001325913.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2688662	2688736	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 12; exon_id "ENSMUSE00001329582.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	exon	2688842	2689032	.	+	.	gene_id "ENSMUSG00000101064.1"; transcript_id "ENSMUST00000187264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm18798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm18798-201"; exon_number 13; exon_id "ENSMUSE00001318901.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045385.1"; havana_transcript "OTTMUST00000119114.1";
mm10-chrY	HAVANA	gene	2720339	2720674	.	-	.	gene_id "ENSMUSG00000095573.2"; gene_type "protein_coding"; gene_name "H2al2b"; level 2; havana_gene "OTTMUSG00000045386.1";
mm10-chrY	HAVANA	transcript	2720339	2720674	.	-	.	gene_id "ENSMUSG00000095573.2"; transcript_id "ENSMUST00000187660.1"; gene_type "protein_coding"; gene_name "H2al2b"; transcript_type "unprocessed_pseudogene"; transcript_name "H2al2b-202"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; havana_gene "OTTMUSG00000045386.1"; havana_transcript "OTTMUST00000119115.1";
mm10-chrY	HAVANA	exon	2720339	2720674	.	-	.	gene_id "ENSMUSG00000095573.2"; transcript_id "ENSMUST00000187660.1"; gene_type "protein_coding"; gene_name "H2al2b"; transcript_type "unprocessed_pseudogene"; transcript_name "H2al2b-202"; exon_number 1; exon_id "ENSMUSE00001326375.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; havana_gene "OTTMUSG00000045386.1"; havana_transcript "OTTMUST00000119115.1";
mm10-chrY	ENSEMBL	transcript	2720339	2720674	.	-	.	gene_id "ENSMUSG00000095573.2"; transcript_id "ENSMUST00000168551.1"; gene_type "protein_coding"; gene_name "H2al2b"; transcript_type "protein_coding"; transcript_name "H2al2b-201"; level 3; protein_id "ENSMUSP00000132924.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53251.1"; havana_gene "OTTMUSG00000045386.1";
mm10-chrY	ENSEMBL	exon	2720339	2720674	.	-	.	gene_id "ENSMUSG00000095573.2"; transcript_id "ENSMUST00000168551.1"; gene_type "protein_coding"; gene_name "H2al2b"; transcript_type "protein_coding"; transcript_name "H2al2b-201"; exon_number 1; exon_id "ENSMUSE00001043908.1"; level 3; protein_id "ENSMUSP00000132924.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53251.1"; havana_gene "OTTMUSG00000045386.1";
mm10-chrY	ENSEMBL	CDS	2720342	2720674	.	-	0	gene_id "ENSMUSG00000095573.2"; transcript_id "ENSMUST00000168551.1"; gene_type "protein_coding"; gene_name "H2al2b"; transcript_type "protein_coding"; transcript_name "H2al2b-201"; exon_number 1; exon_id "ENSMUSE00001043908.1"; level 3; protein_id "ENSMUSP00000132924.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53251.1"; havana_gene "OTTMUSG00000045386.1";
mm10-chrY	ENSEMBL	start_codon	2720672	2720674	.	-	0	gene_id "ENSMUSG00000095573.2"; transcript_id "ENSMUST00000168551.1"; gene_type "protein_coding"; gene_name "H2al2b"; transcript_type "protein_coding"; transcript_name "H2al2b-201"; exon_number 1; exon_id "ENSMUSE00001043908.1"; level 3; protein_id "ENSMUSP00000132924.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53251.1"; havana_gene "OTTMUSG00000045386.1";
mm10-chrY	ENSEMBL	stop_codon	2720339	2720341	.	-	0	gene_id "ENSMUSG00000095573.2"; transcript_id "ENSMUST00000168551.1"; gene_type "protein_coding"; gene_name "H2al2b"; transcript_type "protein_coding"; transcript_name "H2al2b-201"; exon_number 1; exon_id "ENSMUSE00001043908.1"; level 3; protein_id "ENSMUSP00000132924.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53251.1"; havana_gene "OTTMUSG00000045386.1";
mm10-chrY	ENSEMBL	UTR	2720339	2720341	.	-	.	gene_id "ENSMUSG00000095573.2"; transcript_id "ENSMUST00000168551.1"; gene_type "protein_coding"; gene_name "H2al2b"; transcript_type "protein_coding"; transcript_name "H2al2b-201"; exon_number 1; exon_id "ENSMUSE00001043908.1"; level 3; protein_id "ENSMUSP00000132924.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS53251.1"; havana_gene "OTTMUSG00000045386.1";
mm10-chrY	HAVANA	gene	2721836	2722099	.	-	.	gene_id "ENSMUSG00000101114.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28628"; level 2; havana_gene "OTTMUSG00000045387.1";
mm10-chrY	HAVANA	transcript	2721836	2722099	.	-	.	gene_id "ENSMUSG00000101114.1"; transcript_id "ENSMUST00000187006.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28628"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28628-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045387.1"; havana_transcript "OTTMUST00000119116.1";
mm10-chrY	HAVANA	exon	2721836	2722099	.	-	.	gene_id "ENSMUSG00000101114.1"; transcript_id "ENSMUST00000187006.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28628"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28628-201"; exon_number 1; exon_id "ENSMUSE00001319773.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045387.1"; havana_transcript "OTTMUST00000119116.1";
mm10-chrY	HAVANA	gene	2785165	2796205	.	-	.	gene_id "ENSMUSG00000102053.1"; gene_type "protein_coding"; gene_name "Gm4064"; level 2; havana_gene "OTTMUSG00000045388.1";
mm10-chrY	HAVANA	transcript	2785165	2796205	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	exon	2796153	2796205	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 1; exon_id "ENSMUSE00001323619.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	exon	2793045	2793157	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 2; exon_id "ENSMUSE00001331098.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	CDS	2793045	2793153	.	-	0	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 2; exon_id "ENSMUSE00001331098.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	start_codon	2793151	2793153	.	-	0	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 2; exon_id "ENSMUSE00001331098.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	exon	2792491	2792597	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 3; exon_id "ENSMUSE00001334402.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	CDS	2792491	2792597	.	-	2	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 3; exon_id "ENSMUSE00001334402.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	exon	2791204	2791381	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 4; exon_id "ENSMUSE00001333069.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	CDS	2791204	2791381	.	-	0	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 4; exon_id "ENSMUSE00001333069.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	exon	2789432	2789584	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 5; exon_id "ENSMUSE00001323781.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	CDS	2789432	2789584	.	-	2	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 5; exon_id "ENSMUSE00001323781.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	exon	2788525	2788633	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 6; exon_id "ENSMUSE00001327528.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	CDS	2788525	2788633	.	-	2	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 6; exon_id "ENSMUSE00001327528.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	exon	2787077	2787157	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 7; exon_id "ENSMUSE00001336098.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	CDS	2787077	2787157	.	-	1	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 7; exon_id "ENSMUSE00001336098.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	exon	2786024	2786112	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 8; exon_id "ENSMUSE00001327661.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	CDS	2786024	2786112	.	-	1	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 8; exon_id "ENSMUSE00001327661.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	exon	2785165	2785842	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 9; exon_id "ENSMUSE00001087096.2"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	CDS	2785529	2785842	.	-	2	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 9; exon_id "ENSMUSE00001087096.2"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	stop_codon	2785526	2785528	.	-	0	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 9; exon_id "ENSMUSE00001087096.2"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	UTR	2796153	2796205	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 1; exon_id "ENSMUSE00001323619.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	UTR	2793154	2793157	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 2; exon_id "ENSMUSE00001331098.1"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	UTR	2785165	2785528	.	-	.	gene_id "ENSMUSG00000102053.1"; transcript_id "ENSMUST00000187482.1"; gene_type "protein_coding"; gene_name "Gm4064"; transcript_type "protein_coding"; transcript_name "Gm4064-201"; exon_number 9; exon_id "ENSMUSE00001087096.2"; level 2; protein_id "ENSMUSP00000140512.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85835.1"; havana_gene "OTTMUSG00000045388.1"; havana_transcript "OTTMUST00000119117.1";
mm10-chrY	HAVANA	gene	2806115	2806692	.	-	.	gene_id "ENSMUSG00000100700.1"; gene_type "processed_pseudogene"; gene_name "Gm6137"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045389.1";
mm10-chrY	HAVANA	transcript	2806115	2806692	.	-	.	gene_id "ENSMUSG00000100700.1"; transcript_id "ENSMUST00000187552.1"; gene_type "processed_pseudogene"; gene_name "Gm6137"; transcript_type "processed_pseudogene"; transcript_name "Gm6137-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045389.1"; havana_transcript "OTTMUST00000119118.1";
mm10-chrY	HAVANA	exon	2806115	2806692	.	-	.	gene_id "ENSMUSG00000100700.1"; transcript_id "ENSMUST00000187552.1"; gene_type "processed_pseudogene"; gene_name "Gm6137"; transcript_type "processed_pseudogene"; transcript_name "Gm6137-201"; exon_number 1; exon_id "ENSMUSE00001324937.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045389.1"; havana_transcript "OTTMUST00000119118.1";
mm10-chrY	HAVANA	gene	2825380	2826353	.	+	.	gene_id "ENSMUSG00000101066.1"; gene_type "processed_pseudogene"; gene_name "Gm8498"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045390.1";
mm10-chrY	HAVANA	transcript	2825380	2826353	.	+	.	gene_id "ENSMUSG00000101066.1"; transcript_id "ENSMUST00000188227.1"; gene_type "processed_pseudogene"; gene_name "Gm8498"; transcript_type "processed_pseudogene"; transcript_name "Gm8498-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045390.1"; havana_transcript "OTTMUST00000119119.1";
mm10-chrY	HAVANA	exon	2825380	2826353	.	+	.	gene_id "ENSMUSG00000101066.1"; transcript_id "ENSMUST00000188227.1"; gene_type "processed_pseudogene"; gene_name "Gm8498"; transcript_type "processed_pseudogene"; transcript_name "Gm8498-201"; exon_number 1; exon_id "ENSMUSE00001318297.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045390.1"; havana_transcript "OTTMUST00000119119.1";
mm10-chrY	HAVANA	gene	2830680	2841854	.	+	.	gene_id "ENSMUSG00000094658.7"; gene_type "protein_coding"; gene_name "Rbmy"; level 2; havana_gene "OTTMUSG00000045391.1";
mm10-chrY	HAVANA	transcript	2830680	2841851	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	exon	2830680	2830751	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 1; exon_id "ENSMUSE00000997790.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	exon	2833555	2833667	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 2; exon_id "ENSMUSE00001043676.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	CDS	2833559	2833667	.	+	0	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 2; exon_id "ENSMUSE00001043676.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	start_codon	2833559	2833561	.	+	0	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 2; exon_id "ENSMUSE00001043676.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	exon	2834115	2834221	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 3; exon_id "ENSMUSE00001044329.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	CDS	2834115	2834221	.	+	2	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 3; exon_id "ENSMUSE00001044329.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	exon	2835331	2835508	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 4; exon_id "ENSMUSE00001002292.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	CDS	2835331	2835508	.	+	0	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 4; exon_id "ENSMUSE00001002292.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	exon	2837128	2837280	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 5; exon_id "ENSMUSE00001039690.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	CDS	2837128	2837280	.	+	2	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 5; exon_id "ENSMUSE00001039690.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	exon	2838079	2838187	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 6; exon_id "ENSMUSE00000978100.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	CDS	2838079	2838187	.	+	2	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 6; exon_id "ENSMUSE00000978100.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	exon	2839555	2839635	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 7; exon_id "ENSMUSE00000971638.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	CDS	2839555	2839635	.	+	1	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 7; exon_id "ENSMUSE00000971638.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	exon	2840911	2840999	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 8; exon_id "ENSMUSE00001002830.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	CDS	2840911	2840999	.	+	1	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 8; exon_id "ENSMUSE00001002830.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	exon	2841181	2841851	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 9; exon_id "ENSMUSE00001332001.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	CDS	2841181	2841494	.	+	2	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 9; exon_id "ENSMUSE00001332001.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	stop_codon	2841495	2841497	.	+	0	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 9; exon_id "ENSMUSE00001332001.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	UTR	2830680	2830751	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 1; exon_id "ENSMUSE00000997790.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	UTR	2833555	2833558	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 2; exon_id "ENSMUSE00001043676.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	UTR	2841495	2841851	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000171534.7"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-202"; exon_number 9; exon_id "ENSMUSE00001332001.1"; level 2; protein_id "ENSMUSP00000130080.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119120.1";
mm10-chrY	HAVANA	transcript	2830699	2841854	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	exon	2830699	2830751	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 1; exon_id "ENSMUSE00001322767.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	exon	2832910	2833060	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 2; exon_id "ENSMUSE00001025870.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	exon	2833555	2833667	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 3; exon_id "ENSMUSE00001043676.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	CDS	2833559	2833667	.	+	0	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 3; exon_id "ENSMUSE00001043676.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	start_codon	2833559	2833561	.	+	0	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 3; exon_id "ENSMUSE00001043676.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	exon	2834115	2834221	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 4; exon_id "ENSMUSE00001044329.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	CDS	2834115	2834221	.	+	2	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 4; exon_id "ENSMUSE00001044329.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	exon	2835331	2835508	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 5; exon_id "ENSMUSE00001002292.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	CDS	2835331	2835508	.	+	0	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 5; exon_id "ENSMUSE00001002292.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	exon	2837128	2837280	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 6; exon_id "ENSMUSE00001039690.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	CDS	2837128	2837280	.	+	2	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 6; exon_id "ENSMUSE00001039690.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	exon	2838079	2838187	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 7; exon_id "ENSMUSE00000978100.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	CDS	2838079	2838187	.	+	2	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 7; exon_id "ENSMUSE00000978100.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	exon	2839555	2839635	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 8; exon_id "ENSMUSE00000971638.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	CDS	2839555	2839635	.	+	1	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 8; exon_id "ENSMUSE00000971638.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	exon	2840911	2840999	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 9; exon_id "ENSMUSE00001002830.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	CDS	2840911	2840999	.	+	1	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 9; exon_id "ENSMUSE00001002830.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	exon	2841181	2841854	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 10; exon_id "ENSMUSE00001327507.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	CDS	2841181	2841494	.	+	2	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 10; exon_id "ENSMUSE00001327507.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	stop_codon	2841495	2841497	.	+	0	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 10; exon_id "ENSMUSE00001327507.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	UTR	2830699	2830751	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 1; exon_id "ENSMUSE00001322767.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	UTR	2832910	2833060	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 2; exon_id "ENSMUSE00001025870.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	UTR	2833555	2833558	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 3; exon_id "ENSMUSE00001043676.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	UTR	2841495	2841854	.	+	.	gene_id "ENSMUSG00000094658.7"; transcript_id "ENSMUST00000100360.4"; gene_type "protein_coding"; gene_name "Rbmy"; transcript_type "protein_coding"; transcript_name "Rbmy-201"; exon_number 10; exon_id "ENSMUSE00001327507.1"; level 2; protein_id "ENSMUSP00000097930.3"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS30546.1"; havana_gene "OTTMUSG00000045391.1"; havana_transcript "OTTMUST00000119121.1";
mm10-chrY	HAVANA	gene	2830699	2873492	.	+	.	gene_id "ENSMUSG00000095852.7"; gene_type "protein_coding"; gene_name "Gm10256"; level 2; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	transcript	2830699	2873293	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	exon	2830699	2830751	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 1; exon_id "ENSMUSE00001044849.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	exon	2865206	2865318	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 2; exon_id "ENSMUSE00000968677.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	CDS	2865210	2865318	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 2; exon_id "ENSMUSE00000968677.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	start_codon	2865210	2865212	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 2; exon_id "ENSMUSE00000968677.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	exon	2865766	2865872	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 3; exon_id "ENSMUSE00001043979.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	CDS	2865766	2865872	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 3; exon_id "ENSMUSE00001043979.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	exon	2866982	2867159	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 4; exon_id "ENSMUSE00001089275.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	CDS	2866982	2867159	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 4; exon_id "ENSMUSE00001089275.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	exon	2868779	2868931	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 5; exon_id "ENSMUSE00001059336.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	CDS	2868779	2868931	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 5; exon_id "ENSMUSE00001059336.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	exon	2869727	2869835	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 6; exon_id "ENSMUSE00001031707.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	CDS	2869727	2869835	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 6; exon_id "ENSMUSE00001031707.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	exon	2871203	2871283	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 7; exon_id "ENSMUSE00001047762.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	CDS	2871203	2871283	.	+	1	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 7; exon_id "ENSMUSE00001047762.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	exon	2872549	2872637	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 8; exon_id "ENSMUSE00000969361.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	CDS	2872549	2872637	.	+	1	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 8; exon_id "ENSMUSE00000969361.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	exon	2872819	2873293	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 9; exon_id "ENSMUSE00001093053.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	CDS	2872819	2873132	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 9; exon_id "ENSMUSE00001093053.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	stop_codon	2873133	2873135	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 9; exon_id "ENSMUSE00001093053.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	UTR	2830699	2830751	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 1; exon_id "ENSMUSE00001044849.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	UTR	2865206	2865209	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 2; exon_id "ENSMUSE00000968677.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	ENSEMBL	UTR	2873133	2873293	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000179404.7"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-201"; exon_number 9; exon_id "ENSMUSE00001093053.1"; level 3; protein_id "ENSMUSP00000136632.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1";
mm10-chrY	HAVANA	transcript	2862139	2873489	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	exon	2862139	2862210	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 1; exon_id "ENSMUSE00001334458.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	exon	2865206	2865318	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 2; exon_id "ENSMUSE00000968677.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	CDS	2865210	2865318	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 2; exon_id "ENSMUSE00000968677.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	start_codon	2865210	2865212	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 2; exon_id "ENSMUSE00000968677.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	exon	2865766	2865872	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 3; exon_id "ENSMUSE00001043979.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	CDS	2865766	2865872	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 3; exon_id "ENSMUSE00001043979.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	exon	2866982	2867159	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 4; exon_id "ENSMUSE00001089275.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	CDS	2866982	2867159	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 4; exon_id "ENSMUSE00001089275.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	exon	2868779	2868931	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 5; exon_id "ENSMUSE00001059336.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	CDS	2868779	2868931	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 5; exon_id "ENSMUSE00001059336.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	exon	2869727	2869835	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 6; exon_id "ENSMUSE00001031707.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	CDS	2869727	2869835	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 6; exon_id "ENSMUSE00001031707.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	exon	2871203	2871283	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 7; exon_id "ENSMUSE00001047762.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	CDS	2871203	2871283	.	+	1	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 7; exon_id "ENSMUSE00001047762.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	exon	2872549	2872637	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 8; exon_id "ENSMUSE00000969361.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	CDS	2872549	2872637	.	+	1	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 8; exon_id "ENSMUSE00000969361.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	exon	2872819	2873489	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 9; exon_id "ENSMUSE00001319779.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	CDS	2872819	2873132	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 9; exon_id "ENSMUSE00001319779.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	stop_codon	2873133	2873135	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 9; exon_id "ENSMUSE00001319779.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	UTR	2862139	2862210	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 1; exon_id "ENSMUSE00001334458.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	UTR	2865206	2865209	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 2; exon_id "ENSMUSE00000968677.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	UTR	2873133	2873489	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000189964.6"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-203"; exon_number 9; exon_id "ENSMUSE00001319779.1"; level 2; protein_id "ENSMUSP00000140037.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119123.1";
mm10-chrY	HAVANA	transcript	2862158	2873492	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	exon	2862158	2862210	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 1; exon_id "ENSMUSE00001318800.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	exon	2864561	2864711	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 2; exon_id "ENSMUSE00001333803.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	exon	2865206	2865318	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 3; exon_id "ENSMUSE00000968677.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	CDS	2865210	2865318	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 3; exon_id "ENSMUSE00000968677.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	start_codon	2865210	2865212	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 3; exon_id "ENSMUSE00000968677.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	exon	2865766	2865872	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 4; exon_id "ENSMUSE00001043979.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	CDS	2865766	2865872	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 4; exon_id "ENSMUSE00001043979.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	exon	2866982	2867159	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 5; exon_id "ENSMUSE00001089275.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	CDS	2866982	2867159	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 5; exon_id "ENSMUSE00001089275.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	exon	2868779	2868931	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 6; exon_id "ENSMUSE00001059336.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	CDS	2868779	2868931	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 6; exon_id "ENSMUSE00001059336.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	exon	2869727	2869835	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 7; exon_id "ENSMUSE00001031707.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	CDS	2869727	2869835	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 7; exon_id "ENSMUSE00001031707.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	exon	2871203	2871283	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 8; exon_id "ENSMUSE00001047762.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	CDS	2871203	2871283	.	+	1	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 8; exon_id "ENSMUSE00001047762.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	exon	2872549	2872637	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 9; exon_id "ENSMUSE00000969361.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	CDS	2872549	2872637	.	+	1	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 9; exon_id "ENSMUSE00000969361.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	exon	2872819	2873492	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 10; exon_id "ENSMUSE00001334641.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	CDS	2872819	2873132	.	+	2	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 10; exon_id "ENSMUSE00001334641.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	stop_codon	2873133	2873135	.	+	0	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 10; exon_id "ENSMUSE00001334641.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	UTR	2862158	2862210	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 1; exon_id "ENSMUSE00001318800.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	UTR	2864561	2864711	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 2; exon_id "ENSMUSE00001333803.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	UTR	2865206	2865209	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 3; exon_id "ENSMUSE00000968677.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	UTR	2873133	2873492	.	+	.	gene_id "ENSMUSG00000095852.7"; transcript_id "ENSMUST00000188114.1"; gene_type "protein_coding"; gene_name "Gm10256"; transcript_type "protein_coding"; transcript_name "Gm10256-202"; exon_number 10; exon_id "ENSMUSE00001334641.1"; level 2; protein_id "ENSMUSP00000140936.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85836.1"; havana_gene "OTTMUSG00000045393.1"; havana_transcript "OTTMUST00000119124.1";
mm10-chrY	HAVANA	gene	2856974	2857874	.	+	.	gene_id "ENSMUSG00000100145.1"; gene_type "processed_pseudogene"; gene_name "Gm8502"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045392.1";
mm10-chrY	HAVANA	transcript	2856974	2857874	.	+	.	gene_id "ENSMUSG00000100145.1"; transcript_id "ENSMUST00000185708.1"; gene_type "processed_pseudogene"; gene_name "Gm8502"; transcript_type "processed_pseudogene"; transcript_name "Gm8502-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045392.1"; havana_transcript "OTTMUST00000119122.1";
mm10-chrY	HAVANA	exon	2856974	2857874	.	+	.	gene_id "ENSMUSG00000100145.1"; transcript_id "ENSMUST00000185708.1"; gene_type "processed_pseudogene"; gene_name "Gm8502"; transcript_type "processed_pseudogene"; transcript_name "Gm8502-201"; exon_number 1; exon_id "ENSMUSE00001327982.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045392.1"; havana_transcript "OTTMUST00000119122.1";
mm10-chrY	HAVANA	gene	2895798	2896626	.	+	.	gene_id "ENSMUSG00000099405.1"; gene_type "processed_pseudogene"; gene_name "Gm8506"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045394.1";
mm10-chrY	HAVANA	transcript	2895798	2896626	.	+	.	gene_id "ENSMUSG00000099405.1"; transcript_id "ENSMUST00000186661.1"; gene_type "processed_pseudogene"; gene_name "Gm8506"; transcript_type "processed_pseudogene"; transcript_name "Gm8506-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045394.1"; havana_transcript "OTTMUST00000119125.1";
mm10-chrY	HAVANA	exon	2895798	2896626	.	+	.	gene_id "ENSMUSG00000099405.1"; transcript_id "ENSMUST00000186661.1"; gene_type "processed_pseudogene"; gene_name "Gm8506"; transcript_type "processed_pseudogene"; transcript_name "Gm8506-201"; exon_number 1; exon_id "ENSMUSE00001322271.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045394.1"; havana_transcript "OTTMUST00000119125.1";
mm10-chrY	HAVANA	gene	2900989	2912206	.	+	.	gene_id "ENSMUSG00000091987.8"; gene_type "protein_coding"; gene_name "Gm10352"; level 2; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	HAVANA	transcript	2900989	2912206	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	exon	2900989	2901060	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 1; exon_id "ENSMUSE00001329150.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	exon	2904129	2904241	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 2; exon_id "ENSMUSE00001334823.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	CDS	2904133	2904241	.	+	0	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 2; exon_id "ENSMUSE00001334823.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	start_codon	2904133	2904135	.	+	0	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 2; exon_id "ENSMUSE00001334823.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	exon	2904689	2904795	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 3; exon_id "ENSMUSE00000986571.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	CDS	2904689	2904795	.	+	2	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 3; exon_id "ENSMUSE00000986571.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	exon	2905907	2906084	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 4; exon_id "ENSMUSE00001042503.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	CDS	2905907	2906084	.	+	0	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 4; exon_id "ENSMUSE00001042503.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	exon	2907704	2907856	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 5; exon_id "ENSMUSE00000995602.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	CDS	2907704	2907856	.	+	2	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 5; exon_id "ENSMUSE00000995602.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	exon	2908654	2908762	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 6; exon_id "ENSMUSE00000966347.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	CDS	2908654	2908762	.	+	2	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 6; exon_id "ENSMUSE00000966347.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	exon	2910130	2910210	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 7; exon_id "ENSMUSE00000996709.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	CDS	2910130	2910210	.	+	1	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 7; exon_id "ENSMUSE00000996709.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	exon	2911263	2911351	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 8; exon_id "ENSMUSE00000992393.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	CDS	2911263	2911351	.	+	1	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 8; exon_id "ENSMUSE00000992393.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	exon	2911533	2912206	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 9; exon_id "ENSMUSE00001324245.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	CDS	2911533	2911846	.	+	2	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 9; exon_id "ENSMUSE00001324245.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	stop_codon	2911847	2911849	.	+	0	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 9; exon_id "ENSMUSE00001324245.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	UTR	2900989	2901060	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 1; exon_id "ENSMUSE00001329150.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	UTR	2904129	2904132	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 2; exon_id "ENSMUSE00001334823.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	HAVANA	UTR	2911847	2912206	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000187842.6"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-202"; exon_number 9; exon_id "ENSMUSE00001324245.1"; level 2; protein_id "ENSMUSP00000140575.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1"; havana_transcript "OTTMUST00000119126.1";
mm10-chrY	ENSEMBL	transcript	2904133	2912188	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	exon	2904133	2904241	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 1; exon_id "ENSMUSE00001070733.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	CDS	2904133	2904241	.	+	0	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 1; exon_id "ENSMUSE00001070733.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	start_codon	2904133	2904135	.	+	0	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 1; exon_id "ENSMUSE00001070733.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	exon	2904689	2904795	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 2; exon_id "ENSMUSE00000986571.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	CDS	2904689	2904795	.	+	2	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 2; exon_id "ENSMUSE00000986571.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	exon	2905907	2906084	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 3; exon_id "ENSMUSE00001042503.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	CDS	2905907	2906084	.	+	0	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 3; exon_id "ENSMUSE00001042503.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	exon	2907704	2907856	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 4; exon_id "ENSMUSE00000995602.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	CDS	2907704	2907856	.	+	2	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 4; exon_id "ENSMUSE00000995602.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	exon	2908654	2908762	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 5; exon_id "ENSMUSE00000966347.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	CDS	2908654	2908762	.	+	2	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 5; exon_id "ENSMUSE00000966347.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	exon	2910130	2910210	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 6; exon_id "ENSMUSE00000996709.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	CDS	2910130	2910210	.	+	1	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 6; exon_id "ENSMUSE00000996709.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	exon	2911263	2911351	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 7; exon_id "ENSMUSE00000992393.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	CDS	2911263	2911351	.	+	1	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 7; exon_id "ENSMUSE00000992393.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	exon	2911533	2912188	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 8; exon_id "ENSMUSE00001079405.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	CDS	2911533	2911846	.	+	2	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 8; exon_id "ENSMUSE00001079405.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	stop_codon	2911847	2911849	.	+	0	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 8; exon_id "ENSMUSE00001079405.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	ENSEMBL	UTR	2911847	2912188	.	+	.	gene_id "ENSMUSG00000091987.8"; transcript_id "ENSMUST00000166474.2"; gene_type "protein_coding"; gene_name "Gm10352"; transcript_type "protein_coding"; transcript_name "Gm10352-201"; exon_number 8; exon_id "ENSMUSE00001079405.1"; level 3; protein_id "ENSMUSP00000129935.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85837.1"; havana_gene "OTTMUSG00000045395.1";
mm10-chrY	HAVANA	gene	2927358	2928252	.	+	.	gene_id "ENSMUSG00000099728.1"; gene_type "processed_pseudogene"; gene_name "Gm8510"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045460.1";
mm10-chrY	HAVANA	transcript	2927358	2928252	.	+	.	gene_id "ENSMUSG00000099728.1"; transcript_id "ENSMUST00000189202.1"; gene_type "processed_pseudogene"; gene_name "Gm8510"; transcript_type "processed_pseudogene"; transcript_name "Gm8510-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045460.1"; havana_transcript "OTTMUST00000119256.1";
mm10-chrY	HAVANA	exon	2927358	2928252	.	+	.	gene_id "ENSMUSG00000099728.1"; transcript_id "ENSMUST00000189202.1"; gene_type "processed_pseudogene"; gene_name "Gm8510"; transcript_type "processed_pseudogene"; transcript_name "Gm8510-201"; exon_number 1; exon_id "ENSMUSE00001324316.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045460.1"; havana_transcript "OTTMUST00000119256.1";
mm10-chrY	HAVANA	gene	2932582	2939416	.	+	.	gene_id "ENSMUSG00000101667.1"; gene_type "protein_coding"; gene_name "Gm29289"; level 2; havana_gene "OTTMUSG00000045461.2";
mm10-chrY	HAVANA	transcript	2932582	2939416	.	+	.	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	exon	2932582	2932653	.	+	.	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 1; exon_id "ENSMUSE00001326853.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	exon	2935737	2935849	.	+	.	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 2; exon_id "ENSMUSE00001335166.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	CDS	2935741	2935849	.	+	0	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 2; exon_id "ENSMUSE00001335166.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	start_codon	2935741	2935743	.	+	0	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 2; exon_id "ENSMUSE00001335166.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	exon	2936297	2936403	.	+	.	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 3; exon_id "ENSMUSE00001326486.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	CDS	2936297	2936403	.	+	2	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 3; exon_id "ENSMUSE00001326486.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	exon	2937514	2937691	.	+	.	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 4; exon_id "ENSMUSE00001335680.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	CDS	2937514	2937691	.	+	0	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 4; exon_id "ENSMUSE00001335680.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	exon	2939311	2939416	.	+	.	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 5; exon_id "ENSMUSE00001328079.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	CDS	2939311	2939416	.	+	2	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 5; exon_id "ENSMUSE00001328079.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	UTR	2932582	2932653	.	+	.	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 1; exon_id "ENSMUSE00001326853.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	UTR	2935737	2935740	.	+	.	gene_id "ENSMUSG00000101667.1"; transcript_id "ENSMUST00000188358.1"; gene_type "protein_coding"; gene_name "Gm29289"; transcript_type "protein_coding"; transcript_name "Gm29289-201"; exon_number 2; exon_id "ENSMUSE00001335166.1"; level 2; protein_id "ENSMUSP00000139969.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045461.2"; havana_transcript "OTTMUST00000119257.2";
mm10-chrY	HAVANA	gene	3294976	3306449	.	-	.	gene_id "ENSMUSG00000093918.7"; gene_type "protein_coding"; gene_name "Gm21677"; level 2; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	HAVANA	transcript	3294976	3306449	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	exon	3306378	3306449	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 1; exon_id "ENSMUSE00001319360.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	exon	3303358	3303470	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 2; exon_id "ENSMUSE00001333802.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	CDS	3303358	3303466	.	-	0	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 2; exon_id "ENSMUSE00001333802.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	start_codon	3303464	3303466	.	-	0	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 2; exon_id "ENSMUSE00001333802.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	exon	3302804	3302910	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 3; exon_id "ENSMUSE00001090604.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	CDS	3302804	3302910	.	-	2	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 3; exon_id "ENSMUSE00001090604.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	exon	3301517	3301694	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 4; exon_id "ENSMUSE00001047792.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	CDS	3301517	3301694	.	-	0	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 4; exon_id "ENSMUSE00001047792.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	exon	3299745	3299897	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 5; exon_id "ENSMUSE00000995743.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	CDS	3299745	3299897	.	-	2	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 5; exon_id "ENSMUSE00000995743.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	exon	3298827	3298935	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 6; exon_id "ENSMUSE00000983520.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	CDS	3298827	3298935	.	-	2	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 6; exon_id "ENSMUSE00000983520.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	exon	3297378	3297458	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 7; exon_id "ENSMUSE00001079046.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	CDS	3297378	3297458	.	-	1	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 7; exon_id "ENSMUSE00001079046.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	exon	3295831	3295919	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 8; exon_id "ENSMUSE00001035457.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	CDS	3295831	3295919	.	-	1	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 8; exon_id "ENSMUSE00001035457.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	exon	3294976	3295649	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 9; exon_id "ENSMUSE00001330857.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	CDS	3295336	3295649	.	-	2	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 9; exon_id "ENSMUSE00001330857.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	stop_codon	3295333	3295335	.	-	0	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 9; exon_id "ENSMUSE00001330857.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	UTR	3306378	3306449	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 1; exon_id "ENSMUSE00001319360.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	UTR	3303467	3303470	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 2; exon_id "ENSMUSE00001333802.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	HAVANA	UTR	3294976	3295335	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000189592.6"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-202"; exon_number 9; exon_id "ENSMUSE00001330857.1"; level 2; protein_id "ENSMUSP00000139527.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1"; havana_transcript "OTTMUST00000119258.1";
mm10-chrY	ENSEMBL	transcript	3295333	3303466	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	exon	3303358	3303466	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 1; exon_id "ENSMUSE00001076024.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	CDS	3303358	3303466	.	-	0	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 1; exon_id "ENSMUSE00001076024.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	start_codon	3303464	3303466	.	-	0	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 1; exon_id "ENSMUSE00001076024.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	exon	3302804	3302910	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 2; exon_id "ENSMUSE00001090604.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	CDS	3302804	3302910	.	-	2	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 2; exon_id "ENSMUSE00001090604.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	exon	3301517	3301694	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 3; exon_id "ENSMUSE00001047792.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	CDS	3301517	3301694	.	-	0	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 3; exon_id "ENSMUSE00001047792.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	exon	3299745	3299897	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 4; exon_id "ENSMUSE00000995743.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	CDS	3299745	3299897	.	-	2	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 4; exon_id "ENSMUSE00000995743.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	exon	3298827	3298935	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 5; exon_id "ENSMUSE00000983520.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	CDS	3298827	3298935	.	-	2	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 5; exon_id "ENSMUSE00000983520.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	exon	3297378	3297458	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 6; exon_id "ENSMUSE00001079046.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	CDS	3297378	3297458	.	-	1	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 6; exon_id "ENSMUSE00001079046.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	exon	3295831	3295919	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 7; exon_id "ENSMUSE00001035457.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	CDS	3295831	3295919	.	-	1	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 7; exon_id "ENSMUSE00001035457.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	exon	3295333	3295649	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 8; exon_id "ENSMUSE00001042518.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	CDS	3295336	3295649	.	-	2	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 8; exon_id "ENSMUSE00001042518.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	stop_codon	3295333	3295335	.	-	0	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 8; exon_id "ENSMUSE00001042518.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	ENSEMBL	UTR	3295333	3295335	.	-	.	gene_id "ENSMUSG00000093918.7"; transcript_id "ENSMUST00000179508.1"; gene_type "protein_coding"; gene_name "Gm21677"; transcript_type "protein_coding"; transcript_name "Gm21677-201"; exon_number 8; exon_id "ENSMUSE00001042518.1"; level 3; protein_id "ENSMUSP00000136939.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85838.1"; havana_gene "OTTMUSG00000045462.1";
mm10-chrY	HAVANA	gene	3310714	3311614	.	+	.	gene_id "ENSMUSG00000099455.1"; gene_type "processed_pseudogene"; gene_name "Gm29288"; level 2; havana_gene "OTTMUSG00000045463.1";
mm10-chrY	HAVANA	transcript	3310714	3311614	.	+	.	gene_id "ENSMUSG00000099455.1"; transcript_id "ENSMUST00000191582.1"; gene_type "processed_pseudogene"; gene_name "Gm29288"; transcript_type "processed_pseudogene"; transcript_name "Gm29288-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045463.1"; havana_transcript "OTTMUST00000119259.1";
mm10-chrY	HAVANA	exon	3310714	3311614	.	+	.	gene_id "ENSMUSG00000099455.1"; transcript_id "ENSMUST00000191582.1"; gene_type "processed_pseudogene"; gene_name "Gm29288"; transcript_type "processed_pseudogene"; transcript_name "Gm29288-201"; exon_number 1; exon_id "ENSMUSE00001318655.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045463.1"; havana_transcript "OTTMUST00000119259.1";
mm10-chrY	HAVANA	gene	3326750	3345329	.	-	.	gene_id "ENSMUSG00000094511.7"; gene_type "protein_coding"; gene_name "Gm21693"; level 2; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	HAVANA	transcript	3326750	3345329	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	exon	3345258	3345329	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 1; exon_id "ENSMUSE00001332103.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	exon	3334902	3335014	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 2; exon_id "ENSMUSE00001322662.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	CDS	3334902	3335010	.	-	0	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 2; exon_id "ENSMUSE00001322662.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	start_codon	3335008	3335010	.	-	0	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 2; exon_id "ENSMUSE00001322662.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	exon	3334348	3334454	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 3; exon_id "ENSMUSE00001066882.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	CDS	3334348	3334454	.	-	2	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 3; exon_id "ENSMUSE00001066882.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	exon	3333060	3333237	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 4; exon_id "ENSMUSE00001007491.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	CDS	3333060	3333237	.	-	0	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 4; exon_id "ENSMUSE00001007491.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	exon	3331288	3331440	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 5; exon_id "ENSMUSE00000964740.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	CDS	3331288	3331440	.	-	2	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 5; exon_id "ENSMUSE00000964740.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	exon	3330377	3330485	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 6; exon_id "ENSMUSE00001049963.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	CDS	3330377	3330485	.	-	2	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 6; exon_id "ENSMUSE00001049963.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	exon	3328928	3329008	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 7; exon_id "ENSMUSE00001050649.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	CDS	3328928	3329008	.	-	1	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 7; exon_id "ENSMUSE00001050649.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	exon	3327605	3327693	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 8; exon_id "ENSMUSE00000979995.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	CDS	3327605	3327693	.	-	1	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 8; exon_id "ENSMUSE00000979995.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	exon	3326750	3327423	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 9; exon_id "ENSMUSE00001332781.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	CDS	3327110	3327423	.	-	2	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 9; exon_id "ENSMUSE00001332781.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	stop_codon	3327107	3327109	.	-	0	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 9; exon_id "ENSMUSE00001332781.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	UTR	3345258	3345329	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 1; exon_id "ENSMUSE00001332103.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	UTR	3335011	3335014	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 2; exon_id "ENSMUSE00001322662.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	HAVANA	UTR	3326750	3327109	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000186047.6"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-202"; exon_number 9; exon_id "ENSMUSE00001332781.1"; level 2; protein_id "ENSMUSP00000139784.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1"; havana_transcript "OTTMUST00000119260.1";
mm10-chrY	ENSEMBL	transcript	3327107	3335010	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	exon	3334902	3335010	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 1; exon_id "ENSMUSE00001035725.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	CDS	3334902	3335010	.	-	0	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 1; exon_id "ENSMUSE00001035725.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	start_codon	3335008	3335010	.	-	0	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 1; exon_id "ENSMUSE00001035725.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	exon	3334348	3334454	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 2; exon_id "ENSMUSE00001066882.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	CDS	3334348	3334454	.	-	2	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 2; exon_id "ENSMUSE00001066882.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	exon	3333060	3333237	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 3; exon_id "ENSMUSE00001007491.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	CDS	3333060	3333237	.	-	0	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 3; exon_id "ENSMUSE00001007491.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	exon	3331288	3331440	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 4; exon_id "ENSMUSE00000964740.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	CDS	3331288	3331440	.	-	2	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 4; exon_id "ENSMUSE00000964740.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	exon	3330377	3330485	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 5; exon_id "ENSMUSE00001049963.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	CDS	3330377	3330485	.	-	2	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 5; exon_id "ENSMUSE00001049963.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	exon	3328928	3329008	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 6; exon_id "ENSMUSE00001050649.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	CDS	3328928	3329008	.	-	1	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 6; exon_id "ENSMUSE00001050649.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	exon	3327605	3327693	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 7; exon_id "ENSMUSE00000979995.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	CDS	3327605	3327693	.	-	1	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 7; exon_id "ENSMUSE00000979995.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	exon	3327107	3327423	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 8; exon_id "ENSMUSE00000992163.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	CDS	3327110	3327423	.	-	2	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 8; exon_id "ENSMUSE00000992163.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	stop_codon	3327107	3327109	.	-	0	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 8; exon_id "ENSMUSE00000992163.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	ENSEMBL	UTR	3327107	3327109	.	-	.	gene_id "ENSMUSG00000094511.7"; transcript_id "ENSMUST00000178531.1"; gene_type "protein_coding"; gene_name "Gm21693"; transcript_type "protein_coding"; transcript_name "Gm21693-201"; exon_number 8; exon_id "ENSMUSE00000992163.1"; level 3; protein_id "ENSMUSP00000136819.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85839.1"; havana_gene "OTTMUSG00000045464.1";
mm10-chrY	HAVANA	gene	3349656	3350532	.	-	.	gene_id "ENSMUSG00000101141.1"; gene_type "processed_pseudogene"; gene_name "Gm21139"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045465.1";
mm10-chrY	HAVANA	transcript	3349656	3350532	.	-	.	gene_id "ENSMUSG00000101141.1"; transcript_id "ENSMUST00000186594.1"; gene_type "processed_pseudogene"; gene_name "Gm21139"; transcript_type "processed_pseudogene"; transcript_name "Gm21139-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045465.1"; havana_transcript "OTTMUST00000119261.1";
mm10-chrY	HAVANA	exon	3349656	3350532	.	-	.	gene_id "ENSMUSG00000101141.1"; transcript_id "ENSMUST00000186594.1"; gene_type "processed_pseudogene"; gene_name "Gm21139"; transcript_type "processed_pseudogene"; transcript_name "Gm21139-201"; exon_number 1; exon_id "ENSMUSE00001324011.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045465.1"; havana_transcript "OTTMUST00000119261.1";
mm10-chrY	HAVANA	gene	3367147	3410167	.	-	.	gene_id "ENSMUSG00000093987.7"; gene_type "protein_coding"; gene_name "Gm21704"; level 2; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	HAVANA	transcript	3367147	3378783	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	exon	3378712	3378783	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 1; exon_id "ENSMUSE00001322236.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	exon	3375320	3375432	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 2; exon_id "ENSMUSE00001054988.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	CDS	3375320	3375428	.	-	0	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 2; exon_id "ENSMUSE00001054988.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	start_codon	3375426	3375428	.	-	0	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 2; exon_id "ENSMUSE00001054988.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	exon	3374766	3374872	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 3; exon_id "ENSMUSE00001004634.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	CDS	3374766	3374872	.	-	2	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 3; exon_id "ENSMUSE00001004634.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	exon	3373479	3373656	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 4; exon_id "ENSMUSE00000995618.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	CDS	3373479	3373656	.	-	0	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 4; exon_id "ENSMUSE00000995618.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	exon	3371707	3371859	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 5; exon_id "ENSMUSE00001041495.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	CDS	3371707	3371859	.	-	2	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 5; exon_id "ENSMUSE00001041495.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	exon	3370789	3370897	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 6; exon_id "ENSMUSE00001076234.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	CDS	3370789	3370897	.	-	2	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 6; exon_id "ENSMUSE00001076234.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	exon	3369341	3369421	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 7; exon_id "ENSMUSE00001093929.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	CDS	3369341	3369421	.	-	1	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 7; exon_id "ENSMUSE00001093929.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	exon	3368002	3368090	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 8; exon_id "ENSMUSE00001062787.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	CDS	3368002	3368090	.	-	1	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 8; exon_id "ENSMUSE00001062787.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	exon	3367147	3367820	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 9; exon_id "ENSMUSE00001333123.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	CDS	3367507	3367820	.	-	2	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 9; exon_id "ENSMUSE00001333123.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	stop_codon	3367504	3367506	.	-	0	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 9; exon_id "ENSMUSE00001333123.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	UTR	3378712	3378783	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 1; exon_id "ENSMUSE00001322236.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	UTR	3375429	3375432	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 2; exon_id "ENSMUSE00001054988.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	HAVANA	UTR	3367147	3367506	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000187277.6"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-202"; exon_number 9; exon_id "ENSMUSE00001333123.1"; level 2; protein_id "ENSMUSP00000140704.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1"; havana_transcript "OTTMUST00000119262.1";
mm10-chrY	ENSEMBL	transcript	3367150	3410167	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	exon	3410096	3410167	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 1; exon_id "ENSMUSE00001091971.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	exon	3375320	3375432	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 2; exon_id "ENSMUSE00001054988.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	CDS	3375320	3375428	.	-	0	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 2; exon_id "ENSMUSE00001054988.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	start_codon	3375426	3375428	.	-	0	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 2; exon_id "ENSMUSE00001054988.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	exon	3374766	3374872	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 3; exon_id "ENSMUSE00001004634.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	CDS	3374766	3374872	.	-	2	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 3; exon_id "ENSMUSE00001004634.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	exon	3373479	3373656	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 4; exon_id "ENSMUSE00000995618.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	CDS	3373479	3373656	.	-	0	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 4; exon_id "ENSMUSE00000995618.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	exon	3371707	3371859	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 5; exon_id "ENSMUSE00001041495.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	CDS	3371707	3371859	.	-	2	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 5; exon_id "ENSMUSE00001041495.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	exon	3370789	3370897	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 6; exon_id "ENSMUSE00001076234.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	CDS	3370789	3370897	.	-	2	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 6; exon_id "ENSMUSE00001076234.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	exon	3369341	3369421	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 7; exon_id "ENSMUSE00001093929.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	CDS	3369341	3369421	.	-	1	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 7; exon_id "ENSMUSE00001093929.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	exon	3368002	3368090	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 8; exon_id "ENSMUSE00001062787.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	CDS	3368002	3368090	.	-	1	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 8; exon_id "ENSMUSE00001062787.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	exon	3367150	3367820	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 9; exon_id "ENSMUSE00000993190.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	CDS	3367507	3367820	.	-	2	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 9; exon_id "ENSMUSE00000993190.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	stop_codon	3367504	3367506	.	-	0	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 9; exon_id "ENSMUSE00000993190.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	UTR	3410096	3410167	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 1; exon_id "ENSMUSE00001091971.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	UTR	3375429	3375432	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 2; exon_id "ENSMUSE00001054988.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	ENSEMBL	UTR	3367150	3367506	.	-	.	gene_id "ENSMUSG00000093987.7"; transcript_id "ENSMUST00000169382.2"; gene_type "protein_coding"; gene_name "Gm21704"; transcript_type "protein_coding"; transcript_name "Gm21704-201"; exon_number 9; exon_id "ENSMUSE00000993190.1"; level 3; protein_id "ENSMUSP00000129249.2"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85840.1"; havana_gene "OTTMUSG00000045466.1";
mm10-chrY	HAVANA	gene	3383123	3384035	.	-	.	gene_id "ENSMUSG00000100285.1"; gene_type "processed_pseudogene"; gene_name "Gm21147"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045467.1";
mm10-chrY	HAVANA	transcript	3383123	3384035	.	-	.	gene_id "ENSMUSG00000100285.1"; transcript_id "ENSMUST00000186046.1"; gene_type "processed_pseudogene"; gene_name "Gm21147"; transcript_type "processed_pseudogene"; transcript_name "Gm21147-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045467.1"; havana_transcript "OTTMUST00000119263.1";
mm10-chrY	HAVANA	exon	3383123	3384035	.	-	.	gene_id "ENSMUSG00000100285.1"; transcript_id "ENSMUST00000186046.1"; gene_type "processed_pseudogene"; gene_name "Gm21147"; transcript_type "processed_pseudogene"; transcript_name "Gm21147-201"; exon_number 1; exon_id "ENSMUSE00001320515.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045467.1"; havana_transcript "OTTMUST00000119263.1";
mm10-chrY	HAVANA	gene	3399188	3410167	.	-	.	gene_id "ENSMUSG00000095948.7"; gene_type "protein_coding"; gene_name "Gm21708"; level 2; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	HAVANA	transcript	3399188	3410148	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	exon	3410096	3410148	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 1; exon_id "ENSMUSE00001328861.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	exon	3407566	3407716	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 2; exon_id "ENSMUSE00001330392.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	exon	3406959	3407071	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 3; exon_id "ENSMUSE00001334429.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	CDS	3406959	3407067	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 3; exon_id "ENSMUSE00001334429.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	start_codon	3407065	3407067	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 3; exon_id "ENSMUSE00001334429.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	exon	3406405	3406511	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 4; exon_id "ENSMUSE00001003735.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	CDS	3406405	3406511	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 4; exon_id "ENSMUSE00001003735.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	exon	3405116	3405293	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 5; exon_id "ENSMUSE00000983319.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	CDS	3405116	3405293	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 5; exon_id "ENSMUSE00000983319.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	exon	3403344	3403496	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 6; exon_id "ENSMUSE00000971351.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	CDS	3403344	3403496	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 6; exon_id "ENSMUSE00000971351.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	exon	3402432	3402540	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 7; exon_id "ENSMUSE00001002669.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	CDS	3402432	3402540	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 7; exon_id "ENSMUSE00001002669.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	exon	3400984	3401064	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 8; exon_id "ENSMUSE00000993711.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	CDS	3400984	3401064	.	-	1	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 8; exon_id "ENSMUSE00000993711.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	exon	3400043	3400131	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 9; exon_id "ENSMUSE00001062248.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	CDS	3400043	3400131	.	-	1	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 9; exon_id "ENSMUSE00001062248.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	exon	3399188	3399861	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 10; exon_id "ENSMUSE00001329692.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	CDS	3399548	3399861	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 10; exon_id "ENSMUSE00001329692.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	stop_codon	3399545	3399547	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 10; exon_id "ENSMUSE00001329692.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	UTR	3410096	3410148	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 1; exon_id "ENSMUSE00001328861.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	UTR	3407566	3407716	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 2; exon_id "ENSMUSE00001330392.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	UTR	3407068	3407071	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 3; exon_id "ENSMUSE00001334429.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	UTR	3399188	3399547	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000190283.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-203"; exon_number 10; exon_id "ENSMUSE00001329692.1"; level 2; protein_id "ENSMUSP00000139659.1"; transcript_support_level "1"; tag "alternative_5_UTR"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119264.1";
mm10-chrY	HAVANA	transcript	3399191	3410167	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	exon	3410096	3410167	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 1; exon_id "ENSMUSE00001327935.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	exon	3406959	3407071	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 2; exon_id "ENSMUSE00001334429.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	CDS	3406959	3407067	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 2; exon_id "ENSMUSE00001334429.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	start_codon	3407065	3407067	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 2; exon_id "ENSMUSE00001334429.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	exon	3406405	3406511	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 3; exon_id "ENSMUSE00001003735.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	CDS	3406405	3406511	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 3; exon_id "ENSMUSE00001003735.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	exon	3405116	3405293	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 4; exon_id "ENSMUSE00000983319.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	CDS	3405116	3405293	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 4; exon_id "ENSMUSE00000983319.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	exon	3403344	3403496	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 5; exon_id "ENSMUSE00000971351.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	CDS	3403344	3403496	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 5; exon_id "ENSMUSE00000971351.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	exon	3402432	3402540	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 6; exon_id "ENSMUSE00001002669.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	CDS	3402432	3402540	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 6; exon_id "ENSMUSE00001002669.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	exon	3400984	3401064	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 7; exon_id "ENSMUSE00000993711.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	CDS	3400984	3401064	.	-	1	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 7; exon_id "ENSMUSE00000993711.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	exon	3400043	3400131	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 8; exon_id "ENSMUSE00001062248.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	CDS	3400043	3400131	.	-	1	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 8; exon_id "ENSMUSE00001062248.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	exon	3399191	3399861	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 9; exon_id "ENSMUSE00001318235.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	CDS	3399548	3399861	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 9; exon_id "ENSMUSE00001318235.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	stop_codon	3399545	3399547	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 9; exon_id "ENSMUSE00001318235.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	UTR	3410096	3410167	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 1; exon_id "ENSMUSE00001327935.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	UTR	3407068	3407071	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 2; exon_id "ENSMUSE00001334429.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	HAVANA	UTR	3399191	3399547	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000188091.6"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-202"; exon_number 9; exon_id "ENSMUSE00001318235.1"; level 2; protein_id "ENSMUSP00000140216.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1"; havana_transcript "OTTMUST00000119265.1";
mm10-chrY	ENSEMBL	transcript	3399545	3407067	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	exon	3406959	3407067	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 1; exon_id "ENSMUSE00001005581.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	CDS	3406959	3407067	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 1; exon_id "ENSMUSE00001005581.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	start_codon	3407065	3407067	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 1; exon_id "ENSMUSE00001005581.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	exon	3406405	3406511	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 2; exon_id "ENSMUSE00001003735.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	CDS	3406405	3406511	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 2; exon_id "ENSMUSE00001003735.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	exon	3405116	3405293	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 3; exon_id "ENSMUSE00000983319.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	CDS	3405116	3405293	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 3; exon_id "ENSMUSE00000983319.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	exon	3403344	3403496	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 4; exon_id "ENSMUSE00000971351.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	CDS	3403344	3403496	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 4; exon_id "ENSMUSE00000971351.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	exon	3402432	3402540	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 5; exon_id "ENSMUSE00001002669.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	CDS	3402432	3402540	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 5; exon_id "ENSMUSE00001002669.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	exon	3400984	3401064	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 6; exon_id "ENSMUSE00000993711.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	CDS	3400984	3401064	.	-	1	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 6; exon_id "ENSMUSE00000993711.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	exon	3400043	3400131	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 7; exon_id "ENSMUSE00001062248.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	CDS	3400043	3400131	.	-	1	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 7; exon_id "ENSMUSE00001062248.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	exon	3399545	3399861	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 8; exon_id "ENSMUSE00001051040.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	CDS	3399548	3399861	.	-	2	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 8; exon_id "ENSMUSE00001051040.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	stop_codon	3399545	3399547	.	-	0	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 8; exon_id "ENSMUSE00001051040.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	ENSEMBL	UTR	3399545	3399547	.	-	.	gene_id "ENSMUSG00000095948.7"; transcript_id "ENSMUST00000180310.1"; gene_type "protein_coding"; gene_name "Gm21708"; transcript_type "protein_coding"; transcript_name "Gm21708-201"; exon_number 8; exon_id "ENSMUSE00001051040.1"; level 3; protein_id "ENSMUSP00000137266.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85841.1"; havana_gene "OTTMUSG00000045468.1";
mm10-chrY	HAVANA	gene	3414421	3415289	.	-	.	gene_id "ENSMUSG00000100960.1"; gene_type "processed_pseudogene"; gene_name "Gm21156"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045469.1";
mm10-chrY	HAVANA	transcript	3414421	3415289	.	-	.	gene_id "ENSMUSG00000100960.1"; transcript_id "ENSMUST00000189693.1"; gene_type "processed_pseudogene"; gene_name "Gm21156"; transcript_type "processed_pseudogene"; transcript_name "Gm21156-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045469.1"; havana_transcript "OTTMUST00000119266.1";
mm10-chrY	HAVANA	exon	3414421	3415289	.	-	.	gene_id "ENSMUSG00000100960.1"; transcript_id "ENSMUST00000189693.1"; gene_type "processed_pseudogene"; gene_name "Gm21156"; transcript_type "processed_pseudogene"; transcript_name "Gm21156-201"; exon_number 1; exon_id "ENSMUSE00001324868.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045469.1"; havana_transcript "OTTMUST00000119266.1";
mm10-chrY	HAVANA	gene	3747151	3747731	.	-	.	gene_id "ENSMUSG00000099970.1"; gene_type "processed_pseudogene"; gene_name "Rhoay-ps2"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045470.1";
mm10-chrY	HAVANA	transcript	3747151	3747731	.	-	.	gene_id "ENSMUSG00000099970.1"; transcript_id "ENSMUST00000186362.1"; gene_type "processed_pseudogene"; gene_name "Rhoay-ps2"; transcript_type "processed_pseudogene"; transcript_name "Rhoay-ps2-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045470.1"; havana_transcript "OTTMUST00000119267.1";
mm10-chrY	HAVANA	exon	3747151	3747731	.	-	.	gene_id "ENSMUSG00000099970.1"; transcript_id "ENSMUST00000186362.1"; gene_type "processed_pseudogene"; gene_name "Rhoay-ps2"; transcript_type "processed_pseudogene"; transcript_name "Rhoay-ps2-201"; exon_number 1; exon_id "ENSMUSE00001327358.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045470.1"; havana_transcript "OTTMUST00000119267.1";
mm10-chrY	HAVANA	gene	3766452	3767372	.	+	.	gene_id "ENSMUSG00000099660.1"; gene_type "processed_pseudogene"; gene_name "Gm2316"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045471.1";
mm10-chrY	HAVANA	transcript	3766452	3767372	.	+	.	gene_id "ENSMUSG00000099660.1"; transcript_id "ENSMUST00000190613.1"; gene_type "processed_pseudogene"; gene_name "Gm2316"; transcript_type "processed_pseudogene"; transcript_name "Gm2316-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045471.1"; havana_transcript "OTTMUST00000119268.1";
mm10-chrY	HAVANA	exon	3766452	3767372	.	+	.	gene_id "ENSMUSG00000099660.1"; transcript_id "ENSMUST00000190613.1"; gene_type "processed_pseudogene"; gene_name "Gm2316"; transcript_type "processed_pseudogene"; transcript_name "Gm2316-201"; exon_number 1; exon_id "ENSMUSE00001335664.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045471.1"; havana_transcript "OTTMUST00000119268.1";
mm10-chrY	HAVANA	gene	3771673	3783267	.	+	.	gene_id "ENSMUSG00000096520.7"; gene_type "protein_coding"; gene_name "Gm3376"; level 2; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	HAVANA	transcript	3771673	3783267	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	exon	3771673	3771744	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 1; exon_id "ENSMUSE00001330754.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	exon	3774801	3774913	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 2; exon_id "ENSMUSE00001325496.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	CDS	3774805	3774913	.	+	0	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 2; exon_id "ENSMUSE00001325496.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	start_codon	3774805	3774807	.	+	0	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 2; exon_id "ENSMUSE00001325496.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	exon	3775361	3775467	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 3; exon_id "ENSMUSE00001068098.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	CDS	3775361	3775467	.	+	2	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 3; exon_id "ENSMUSE00001068098.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	exon	3776581	3776758	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 4; exon_id "ENSMUSE00001031229.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	CDS	3776581	3776758	.	+	0	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 4; exon_id "ENSMUSE00001031229.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	exon	3778378	3778530	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 5; exon_id "ENSMUSE00001061751.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	CDS	3778378	3778530	.	+	2	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 5; exon_id "ENSMUSE00001061751.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	exon	3779336	3779444	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 6; exon_id "ENSMUSE00001060672.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	CDS	3779336	3779444	.	+	2	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 6; exon_id "ENSMUSE00001060672.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	exon	3780813	3780893	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 7; exon_id "ENSMUSE00001062556.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	CDS	3780813	3780893	.	+	1	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 7; exon_id "ENSMUSE00001062556.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	exon	3782324	3782412	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 8; exon_id "ENSMUSE00000973509.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	CDS	3782324	3782412	.	+	1	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 8; exon_id "ENSMUSE00000973509.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	exon	3782594	3783267	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 9; exon_id "ENSMUSE00001324611.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	CDS	3782594	3782907	.	+	2	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 9; exon_id "ENSMUSE00001324611.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	stop_codon	3782908	3782910	.	+	0	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 9; exon_id "ENSMUSE00001324611.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	UTR	3771673	3771744	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 1; exon_id "ENSMUSE00001330754.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	UTR	3774801	3774804	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 2; exon_id "ENSMUSE00001325496.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	HAVANA	UTR	3782908	3783267	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000186140.6"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-202"; exon_number 9; exon_id "ENSMUSE00001324611.1"; level 2; protein_id "ENSMUSP00000141183.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1"; havana_transcript "OTTMUST00000119269.1";
mm10-chrY	ENSEMBL	transcript	3774805	3782910	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	exon	3774805	3774913	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 1; exon_id "ENSMUSE00001085490.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	CDS	3774805	3774913	.	+	0	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 1; exon_id "ENSMUSE00001085490.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	start_codon	3774805	3774807	.	+	0	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 1; exon_id "ENSMUSE00001085490.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	exon	3775361	3775467	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 2; exon_id "ENSMUSE00001068098.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	CDS	3775361	3775467	.	+	2	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 2; exon_id "ENSMUSE00001068098.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	exon	3776581	3776758	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 3; exon_id "ENSMUSE00001031229.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	CDS	3776581	3776758	.	+	0	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 3; exon_id "ENSMUSE00001031229.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	exon	3778378	3778530	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 4; exon_id "ENSMUSE00001061751.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	CDS	3778378	3778530	.	+	2	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 4; exon_id "ENSMUSE00001061751.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	exon	3779336	3779444	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 5; exon_id "ENSMUSE00001060672.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	CDS	3779336	3779444	.	+	2	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 5; exon_id "ENSMUSE00001060672.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	exon	3780813	3780893	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 6; exon_id "ENSMUSE00001062556.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	CDS	3780813	3780893	.	+	1	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 6; exon_id "ENSMUSE00001062556.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	exon	3782324	3782412	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 7; exon_id "ENSMUSE00000973509.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	CDS	3782324	3782412	.	+	1	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 7; exon_id "ENSMUSE00000973509.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	exon	3782594	3782910	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 8; exon_id "ENSMUSE00001049669.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	CDS	3782594	3782907	.	+	2	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 8; exon_id "ENSMUSE00001049669.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	stop_codon	3782908	3782910	.	+	0	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 8; exon_id "ENSMUSE00001049669.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	ENSEMBL	UTR	3782908	3782910	.	+	.	gene_id "ENSMUSG00000096520.7"; transcript_id "ENSMUST00000180202.1"; gene_type "protein_coding"; gene_name "Gm3376"; transcript_type "protein_coding"; transcript_name "Gm3376-201"; exon_number 8; exon_id "ENSMUSE00001049669.1"; level 3; protein_id "ENSMUSP00000136808.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85842.1"; havana_gene "OTTMUSG00000045472.1";
mm10-chrY	HAVANA	gene	3804121	3804701	.	-	.	gene_id "ENSMUSG00000101016.1"; gene_type "processed_pseudogene"; gene_name "Gm2325"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045473.1";
mm10-chrY	HAVANA	transcript	3804121	3804701	.	-	.	gene_id "ENSMUSG00000101016.1"; transcript_id "ENSMUST00000186637.1"; gene_type "processed_pseudogene"; gene_name "Gm2325"; transcript_type "processed_pseudogene"; transcript_name "Gm2325-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045473.1"; havana_transcript "OTTMUST00000119270.1";
mm10-chrY	HAVANA	exon	3804121	3804701	.	-	.	gene_id "ENSMUSG00000101016.1"; transcript_id "ENSMUST00000186637.1"; gene_type "processed_pseudogene"; gene_name "Gm2325"; transcript_type "processed_pseudogene"; transcript_name "Gm2325-201"; exon_number 1; exon_id "ENSMUSE00001330851.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045473.1"; havana_transcript "OTTMUST00000119270.1";
mm10-chrY	HAVANA	gene	3846545	3853545	.	-	.	gene_id "ENSMUSG00000100360.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; level 2; havana_gene "OTTMUSG00000045540.1";
mm10-chrY	HAVANA	transcript	3846545	3853545	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3853429	3853545	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 1; exon_id "ENSMUSE00001321047.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3853240	3853307	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 2; exon_id "ENSMUSE00001326106.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3852987	3853155	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 3; exon_id "ENSMUSE00001332525.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3852763	3852897	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 4; exon_id "ENSMUSE00001332184.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3852094	3852200	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 5; exon_id "ENSMUSE00001319409.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3851793	3851883	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 6; exon_id "ENSMUSE00001319675.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3850285	3850417	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 7; exon_id "ENSMUSE00001329064.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3847915	3848012	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 8; exon_id "ENSMUSE00001323115.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3847672	3847819	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 9; exon_id "ENSMUSE00001323999.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3847385	3847561	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 10; exon_id "ENSMUSE00001331832.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3847176	3847282	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 11; exon_id "ENSMUSE00001331018.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3847013	3847087	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 12; exon_id "ENSMUSE00001329200.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	exon	3846545	3846700	.	-	.	gene_id "ENSMUSG00000100360.1"; transcript_id "ENSMUST00000189153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28649"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28649-201"; exon_number 13; exon_id "ENSMUSE00001334167.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045540.1"; havana_transcript "OTTMUST00000119387.1";
mm10-chrY	HAVANA	gene	3859067	3859672	.	+	.	gene_id "ENSMUSG00000099838.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8521"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045541.1";
mm10-chrY	HAVANA	transcript	3859067	3859672	.	+	.	gene_id "ENSMUSG00000099838.1"; transcript_id "ENSMUST00000190394.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8521"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8521-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045541.1"; havana_transcript "OTTMUST00000119388.1";
mm10-chrY	HAVANA	exon	3859067	3859672	.	+	.	gene_id "ENSMUSG00000099838.1"; transcript_id "ENSMUST00000190394.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm8521"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm8521-201"; exon_number 1; exon_id "ENSMUSE00001329763.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045541.1"; havana_transcript "OTTMUST00000119388.1";
mm10-chrY	HAVANA	gene	3875525	3875928	.	-	.	gene_id "ENSMUSG00000100132.1"; gene_type "processed_pseudogene"; gene_name "Gm18177"; level 2; havana_gene "OTTMUSG00000045542.1";
mm10-chrY	HAVANA	transcript	3875525	3875928	.	-	.	gene_id "ENSMUSG00000100132.1"; transcript_id "ENSMUST00000188373.1"; gene_type "processed_pseudogene"; gene_name "Gm18177"; transcript_type "processed_pseudogene"; transcript_name "Gm18177-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045542.1"; havana_transcript "OTTMUST00000119389.1";
mm10-chrY	HAVANA	exon	3875525	3875928	.	-	.	gene_id "ENSMUSG00000100132.1"; transcript_id "ENSMUST00000188373.1"; gene_type "processed_pseudogene"; gene_name "Gm18177"; transcript_type "processed_pseudogene"; transcript_name "Gm18177-201"; exon_number 1; exon_id "ENSMUSE00001327822.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045542.1"; havana_transcript "OTTMUST00000119389.1";
mm10-chrY	HAVANA	gene	3886204	3886566	.	+	.	gene_id "ENSMUSG00000101030.1"; gene_type "processed_pseudogene"; gene_name "Gm28429"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045543.1";
mm10-chrY	HAVANA	transcript	3886204	3886566	.	+	.	gene_id "ENSMUSG00000101030.1"; transcript_id "ENSMUST00000188521.1"; gene_type "processed_pseudogene"; gene_name "Gm28429"; transcript_type "processed_pseudogene"; transcript_name "Gm28429-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045543.1"; havana_transcript "OTTMUST00000119390.1";
mm10-chrY	HAVANA	exon	3886204	3886566	.	+	.	gene_id "ENSMUSG00000101030.1"; transcript_id "ENSMUST00000188521.1"; gene_type "processed_pseudogene"; gene_name "Gm28429"; transcript_type "processed_pseudogene"; transcript_name "Gm28429-201"; exon_number 1; exon_id "ENSMUSE00001322076.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045543.1"; havana_transcript "OTTMUST00000119390.1";
mm10-chrY	HAVANA	gene	3905027	3905317	.	+	.	gene_id "ENSMUSG00000100641.1"; gene_type "processed_pseudogene"; gene_name "Gm28413"; level 2; havana_gene "OTTMUSG00000045544.1";
mm10-chrY	HAVANA	transcript	3905027	3905317	.	+	.	gene_id "ENSMUSG00000100641.1"; transcript_id "ENSMUST00000189369.1"; gene_type "processed_pseudogene"; gene_name "Gm28413"; transcript_type "processed_pseudogene"; transcript_name "Gm28413-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045544.1"; havana_transcript "OTTMUST00000119391.1";
mm10-chrY	HAVANA	exon	3905027	3905317	.	+	.	gene_id "ENSMUSG00000100641.1"; transcript_id "ENSMUST00000189369.1"; gene_type "processed_pseudogene"; gene_name "Gm28413"; transcript_type "processed_pseudogene"; transcript_name "Gm28413-201"; exon_number 1; exon_id "ENSMUSE00001326971.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045544.1"; havana_transcript "OTTMUST00000119391.1";
mm10-chrY	HAVANA	gene	3909381	3909557	.	+	.	gene_id "ENSMUSG00000101145.1"; gene_type "processed_pseudogene"; gene_name "Gm28412"; level 2; havana_gene "OTTMUSG00000045545.1";
mm10-chrY	HAVANA	transcript	3909381	3909557	.	+	.	gene_id "ENSMUSG00000101145.1"; transcript_id "ENSMUST00000187243.1"; gene_type "processed_pseudogene"; gene_name "Gm28412"; transcript_type "processed_pseudogene"; transcript_name "Gm28412-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045545.1"; havana_transcript "OTTMUST00000119392.1";
mm10-chrY	HAVANA	exon	3909381	3909557	.	+	.	gene_id "ENSMUSG00000101145.1"; transcript_id "ENSMUST00000187243.1"; gene_type "processed_pseudogene"; gene_name "Gm28412"; transcript_type "processed_pseudogene"; transcript_name "Gm28412-201"; exon_number 1; exon_id "ENSMUSE00001331549.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045545.1"; havana_transcript "OTTMUST00000119392.1";
mm10-chrY	HAVANA	gene	3948853	3949713	.	-	.	gene_id "ENSMUSG00000100656.1"; gene_type "processed_pseudogene"; gene_name "Gm8525"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045546.1";
mm10-chrY	HAVANA	transcript	3948853	3949713	.	-	.	gene_id "ENSMUSG00000100656.1"; transcript_id "ENSMUST00000189674.1"; gene_type "processed_pseudogene"; gene_name "Gm8525"; transcript_type "processed_pseudogene"; transcript_name "Gm8525-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045546.1"; havana_transcript "OTTMUST00000119393.1";
mm10-chrY	HAVANA	exon	3948853	3949713	.	-	.	gene_id "ENSMUSG00000100656.1"; transcript_id "ENSMUST00000189674.1"; gene_type "processed_pseudogene"; gene_name "Gm8525"; transcript_type "processed_pseudogene"; transcript_name "Gm8525-201"; exon_number 1; exon_id "ENSMUSE00001329722.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045546.1"; havana_transcript "OTTMUST00000119393.1";
mm10-chrY	HAVANA	gene	3950043	3950336	.	-	.	gene_id "ENSMUSG00000100082.1"; gene_type "processed_pseudogene"; gene_name "Gm28414"; level 2; havana_gene "OTTMUSG00000045547.1";
mm10-chrY	HAVANA	transcript	3950043	3950336	.	-	.	gene_id "ENSMUSG00000100082.1"; transcript_id "ENSMUST00000190111.1"; gene_type "processed_pseudogene"; gene_name "Gm28414"; transcript_type "processed_pseudogene"; transcript_name "Gm28414-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045547.1"; havana_transcript "OTTMUST00000119394.1";
mm10-chrY	HAVANA	exon	3950043	3950336	.	-	.	gene_id "ENSMUSG00000100082.1"; transcript_id "ENSMUST00000190111.1"; gene_type "processed_pseudogene"; gene_name "Gm28414"; transcript_type "processed_pseudogene"; transcript_name "Gm28414-201"; exon_number 1; exon_id "ENSMUSE00001325037.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045547.1"; havana_transcript "OTTMUST00000119394.1";
mm10-chrY	HAVANA	gene	3968870	3983656	.	+	.	gene_id "ENSMUSG00000101712.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28648"; level 2; havana_gene "OTTMUSG00000045548.1";
mm10-chrY	HAVANA	transcript	3968870	3983656	.	+	.	gene_id "ENSMUSG00000101712.1"; transcript_id "ENSMUST00000190092.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28648"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28648-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045548.1"; havana_transcript "OTTMUST00000119395.1";
mm10-chrY	HAVANA	exon	3968870	3968995	.	+	.	gene_id "ENSMUSG00000101712.1"; transcript_id "ENSMUST00000190092.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28648"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28648-201"; exon_number 1; exon_id "ENSMUSE00001329989.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045548.1"; havana_transcript "OTTMUST00000119395.1";
mm10-chrY	HAVANA	exon	3969305	3969368	.	+	.	gene_id "ENSMUSG00000101712.1"; transcript_id "ENSMUST00000190092.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28648"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28648-201"; exon_number 2; exon_id "ENSMUSE00001326371.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045548.1"; havana_transcript "OTTMUST00000119395.1";
mm10-chrY	HAVANA	exon	3969628	3969662	.	+	.	gene_id "ENSMUSG00000101712.1"; transcript_id "ENSMUST00000190092.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28648"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28648-201"; exon_number 3; exon_id "ENSMUSE00001329509.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045548.1"; havana_transcript "OTTMUST00000119395.1";
mm10-chrY	HAVANA	exon	3983539	3983656	.	+	.	gene_id "ENSMUSG00000101712.1"; transcript_id "ENSMUST00000190092.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28648"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28648-201"; exon_number 4; exon_id "ENSMUSE00001324537.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045548.1"; havana_transcript "OTTMUST00000119395.1";
mm10-chrY	HAVANA	gene	3986025	3986221	.	-	.	gene_id "ENSMUSG00000101558.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28647"; level 2; havana_gene "OTTMUSG00000045549.1";
mm10-chrY	HAVANA	transcript	3986025	3986221	.	-	.	gene_id "ENSMUSG00000101558.1"; transcript_id "ENSMUST00000188416.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28647-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045549.1"; havana_transcript "OTTMUST00000119396.1";
mm10-chrY	HAVANA	exon	3986025	3986221	.	-	.	gene_id "ENSMUSG00000101558.1"; transcript_id "ENSMUST00000188416.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28647-201"; exon_number 1; exon_id "ENSMUSE00001328739.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045549.1"; havana_transcript "OTTMUST00000119396.1";
mm10-chrY	HAVANA	gene	3991193	3991881	.	-	.	gene_id "ENSMUSG00000100753.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29435"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045550.1";
mm10-chrY	HAVANA	transcript	3991193	3991881	.	-	.	gene_id "ENSMUSG00000100753.1"; transcript_id "ENSMUST00000191310.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29435"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29435-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045550.1"; havana_transcript "OTTMUST00000119397.1";
mm10-chrY	HAVANA	exon	3991193	3991881	.	-	.	gene_id "ENSMUSG00000100753.1"; transcript_id "ENSMUST00000191310.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29435"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29435-201"; exon_number 1; exon_id "ENSMUSE00001333918.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045550.1"; havana_transcript "OTTMUST00000119397.1";
mm10-chrY	HAVANA	gene	4005164	4016574	.	+	.	gene_id "ENSMUSG00000101499.1"; gene_type "unprocessed_pseudogene"; gene_name "Vmn2r-ps139"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045551.1";
mm10-chrY	HAVANA	transcript	4005164	4016574	.	+	.	gene_id "ENSMUSG00000101499.1"; transcript_id "ENSMUST00000190764.1"; gene_type "unprocessed_pseudogene"; gene_name "Vmn2r-ps139"; transcript_type "unprocessed_pseudogene"; transcript_name "Vmn2r-ps139-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045551.1"; havana_transcript "OTTMUST00000119398.1";
mm10-chrY	HAVANA	exon	4005164	4005967	.	+	.	gene_id "ENSMUSG00000101499.1"; transcript_id "ENSMUST00000190764.1"; gene_type "unprocessed_pseudogene"; gene_name "Vmn2r-ps139"; transcript_type "unprocessed_pseudogene"; transcript_name "Vmn2r-ps139-201"; exon_number 1; exon_id "ENSMUSE00001318260.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045551.1"; havana_transcript "OTTMUST00000119398.1";
mm10-chrY	HAVANA	exon	4013106	4013329	.	+	.	gene_id "ENSMUSG00000101499.1"; transcript_id "ENSMUST00000190764.1"; gene_type "unprocessed_pseudogene"; gene_name "Vmn2r-ps139"; transcript_type "unprocessed_pseudogene"; transcript_name "Vmn2r-ps139-201"; exon_number 2; exon_id "ENSMUSE00001319655.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045551.1"; havana_transcript "OTTMUST00000119398.1";
mm10-chrY	HAVANA	exon	4014415	4014544	.	+	.	gene_id "ENSMUSG00000101499.1"; transcript_id "ENSMUST00000190764.1"; gene_type "unprocessed_pseudogene"; gene_name "Vmn2r-ps139"; transcript_type "unprocessed_pseudogene"; transcript_name "Vmn2r-ps139-201"; exon_number 3; exon_id "ENSMUSE00001324401.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045551.1"; havana_transcript "OTTMUST00000119398.1";
mm10-chrY	HAVANA	exon	4015676	4016574	.	+	.	gene_id "ENSMUSG00000101499.1"; transcript_id "ENSMUST00000190764.1"; gene_type "unprocessed_pseudogene"; gene_name "Vmn2r-ps139"; transcript_type "unprocessed_pseudogene"; transcript_name "Vmn2r-ps139-201"; exon_number 4; exon_id "ENSMUSE00001336112.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045551.1"; havana_transcript "OTTMUST00000119398.1";
mm10-chrY	HAVANA	gene	4164028	4164705	.	-	.	gene_id "ENSMUSG00000101108.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29038"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045552.1";
mm10-chrY	HAVANA	transcript	4164028	4164705	.	-	.	gene_id "ENSMUSG00000101108.1"; transcript_id "ENSMUST00000191543.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29038"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29038-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045552.1"; havana_transcript "OTTMUST00000119399.1";
mm10-chrY	HAVANA	exon	4164028	4164705	.	-	.	gene_id "ENSMUSG00000101108.1"; transcript_id "ENSMUST00000191543.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29038"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29038-201"; exon_number 1; exon_id "ENSMUSE00001334450.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045552.1"; havana_transcript "OTTMUST00000119399.1";
mm10-chrY	HAVANA	gene	4227580	4239057	.	+	.	gene_id "ENSMUSG00000100300.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28191"; level 2; havana_gene "OTTMUSG00000045553.1";
mm10-chrY	HAVANA	transcript	4227580	4239057	.	+	.	gene_id "ENSMUSG00000100300.1"; transcript_id "ENSMUST00000189112.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28191-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045553.1"; havana_transcript "OTTMUST00000119400.1";
mm10-chrY	HAVANA	exon	4227580	4227688	.	+	.	gene_id "ENSMUSG00000100300.1"; transcript_id "ENSMUST00000189112.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28191-201"; exon_number 1; exon_id "ENSMUSE00001334719.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045553.1"; havana_transcript "OTTMUST00000119400.1";
mm10-chrY	HAVANA	exon	4238417	4238483	.	+	.	gene_id "ENSMUSG00000100300.1"; transcript_id "ENSMUST00000189112.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28191-201"; exon_number 2; exon_id "ENSMUSE00001326590.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045553.1"; havana_transcript "OTTMUST00000119400.1";
mm10-chrY	HAVANA	exon	4239023	4239057	.	+	.	gene_id "ENSMUSG00000100300.1"; transcript_id "ENSMUST00000189112.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28191-201"; exon_number 3; exon_id "ENSMUSE00001327338.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045553.1"; havana_transcript "OTTMUST00000119400.1";
mm10-chrY	HAVANA	gene	4311904	4312582	.	-	.	gene_id "ENSMUSG00000100683.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28186"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045554.1";
mm10-chrY	HAVANA	transcript	4311904	4312582	.	-	.	gene_id "ENSMUSG00000100683.1"; transcript_id "ENSMUST00000187447.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28186"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28186-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045554.1"; havana_transcript "OTTMUST00000119401.1";
mm10-chrY	HAVANA	exon	4311904	4312582	.	-	.	gene_id "ENSMUSG00000100683.1"; transcript_id "ENSMUST00000187447.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28186"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28186-201"; exon_number 1; exon_id "ENSMUSE00001335888.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045554.1"; havana_transcript "OTTMUST00000119401.1";
mm10-chrY	HAVANA	gene	4341127	4381726	.	+	.	gene_id "ENSMUSG00000102088.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; level 2; havana_gene "OTTMUSG00000045555.1";
mm10-chrY	HAVANA	transcript	4341127	4381726	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4341127	4341344	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 1; exon_id "ENSMUSE00001319801.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4342521	4342652	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 2; exon_id "ENSMUSE00001333167.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4353745	4353811	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 3; exon_id "ENSMUSE00001334109.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4354351	4354385	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 4; exon_id "ENSMUSE00001334504.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4361920	4361986	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 5; exon_id "ENSMUSE00001332896.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4362114	4362190	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 6; exon_id "ENSMUSE00001334631.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4362626	4362660	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 7; exon_id "ENSMUSE00001330734.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4369986	4370039	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 8; exon_id "ENSMUSE00001330191.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4371859	4371986	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 9; exon_id "ENSMUSE00001324016.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4372072	4372191	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 10; exon_id "ENSMUSE00001332928.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4380704	4380875	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 11; exon_id "ENSMUSE00001329742.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	exon	4381457	4381726	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000189723.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "processed_transcript"; transcript_name "Gm21064-201"; exon_number 12; exon_id "ENSMUSE00001321288.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119402.1";
mm10-chrY	HAVANA	transcript	4342544	4361986	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000190583.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm21064-202"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119403.1";
mm10-chrY	HAVANA	exon	4342544	4342652	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000190583.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm21064-202"; exon_number 1; exon_id "ENSMUSE00001334646.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119403.1";
mm10-chrY	HAVANA	exon	4353745	4353811	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000190583.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm21064-202"; exon_number 2; exon_id "ENSMUSE00001334109.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119403.1";
mm10-chrY	HAVANA	exon	4354351	4354385	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000190583.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm21064-202"; exon_number 3; exon_id "ENSMUSE00001334504.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119403.1";
mm10-chrY	HAVANA	exon	4361920	4361986	.	+	.	gene_id "ENSMUSG00000102088.6"; transcript_id "ENSMUST00000190583.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21064"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm21064-202"; exon_number 4; exon_id "ENSMUSE00001332896.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045555.1"; havana_transcript "OTTMUST00000119403.1";
mm10-chrY	HAVANA	gene	4531045	4531637	.	+	.	gene_id "ENSMUSG00000099514.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28241"; level 2; havana_gene "OTTMUSG00000045625.1";
mm10-chrY	HAVANA	transcript	4531045	4531637	.	+	.	gene_id "ENSMUSG00000099514.1"; transcript_id "ENSMUST00000190916.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28241-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045625.1"; havana_transcript "OTTMUST00000119511.1";
mm10-chrY	HAVANA	exon	4531045	4531143	.	+	.	gene_id "ENSMUSG00000099514.1"; transcript_id "ENSMUST00000190916.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28241-201"; exon_number 1; exon_id "ENSMUSE00001335841.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045625.1"; havana_transcript "OTTMUST00000119511.1";
mm10-chrY	HAVANA	exon	4531502	4531637	.	+	.	gene_id "ENSMUSG00000099514.1"; transcript_id "ENSMUST00000190916.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28241-201"; exon_number 2; exon_id "ENSMUSE00001323929.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045625.1"; havana_transcript "OTTMUST00000119511.1";
mm10-chrY	HAVANA	gene	4586871	4590103	.	+	.	gene_id "ENSMUSG00000100446.1"; gene_type "lincRNA"; gene_name "Gm28242"; level 2; havana_gene "OTTMUSG00000045626.1";
mm10-chrY	HAVANA	transcript	4586871	4590103	.	+	.	gene_id "ENSMUSG00000100446.1"; transcript_id "ENSMUST00000187274.1"; gene_type "lincRNA"; gene_name "Gm28242"; transcript_type "lincRNA"; transcript_name "Gm28242-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045626.1"; havana_transcript "OTTMUST00000119512.1";
mm10-chrY	HAVANA	exon	4586871	4587508	.	+	.	gene_id "ENSMUSG00000100446.1"; transcript_id "ENSMUST00000187274.1"; gene_type "lincRNA"; gene_name "Gm28242"; transcript_type "lincRNA"; transcript_name "Gm28242-201"; exon_number 1; exon_id "ENSMUSE00001334885.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045626.1"; havana_transcript "OTTMUST00000119512.1";
mm10-chrY	HAVANA	exon	4587994	4588176	.	+	.	gene_id "ENSMUSG00000100446.1"; transcript_id "ENSMUST00000187274.1"; gene_type "lincRNA"; gene_name "Gm28242"; transcript_type "lincRNA"; transcript_name "Gm28242-201"; exon_number 2; exon_id "ENSMUSE00001319981.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045626.1"; havana_transcript "OTTMUST00000119512.1";
mm10-chrY	HAVANA	exon	4588906	4589086	.	+	.	gene_id "ENSMUSG00000100446.1"; transcript_id "ENSMUST00000187274.1"; gene_type "lincRNA"; gene_name "Gm28242"; transcript_type "lincRNA"; transcript_name "Gm28242-201"; exon_number 3; exon_id "ENSMUSE00001325645.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045626.1"; havana_transcript "OTTMUST00000119512.1";
mm10-chrY	HAVANA	exon	4589614	4590103	.	+	.	gene_id "ENSMUSG00000100446.1"; transcript_id "ENSMUST00000187274.1"; gene_type "lincRNA"; gene_name "Gm28242"; transcript_type "lincRNA"; transcript_name "Gm28242-201"; exon_number 4; exon_id "ENSMUSE00001331673.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045626.1"; havana_transcript "OTTMUST00000119512.1";
mm10-chrY	HAVANA	gene	4666848	4669808	.	+	.	gene_id "ENSMUSG00000102680.1"; gene_type "TEC"; gene_name "Gm37222"; level 2; havana_gene "OTTMUSG00000045627.1";
mm10-chrY	HAVANA	transcript	4666848	4669808	.	+	.	gene_id "ENSMUSG00000102680.1"; transcript_id "ENSMUST00000192806.1"; gene_type "TEC"; gene_name "Gm37222"; transcript_type "TEC"; transcript_name "Gm37222-201"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045627.1"; havana_transcript "OTTMUST00000119513.1";
mm10-chrY	HAVANA	exon	4666848	4669808	.	+	.	gene_id "ENSMUSG00000102680.1"; transcript_id "ENSMUST00000192806.1"; gene_type "TEC"; gene_name "Gm37222"; transcript_type "TEC"; transcript_name "Gm37222-201"; exon_number 1; exon_id "ENSMUSE00001337568.1"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045627.1"; havana_transcript "OTTMUST00000119513.1";
mm10-chrY	HAVANA	gene	4768840	4794934	.	-	.	gene_id "ENSMUSG00000099684.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; level 2; havana_gene "OTTMUSG00000045628.1";
mm10-chrY	HAVANA	transcript	4768840	4793479	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000187566.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28356-202"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119514.1";
mm10-chrY	HAVANA	exon	4793371	4793479	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000187566.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28356-202"; exon_number 1; exon_id "ENSMUSE00001320506.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119514.1";
mm10-chrY	HAVANA	exon	4787977	4788043	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000187566.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28356-202"; exon_number 2; exon_id "ENSMUSE00001326810.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119514.1";
mm10-chrY	HAVANA	exon	4787357	4787391	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000187566.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28356-202"; exon_number 3; exon_id "ENSMUSE00001327655.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119514.1";
mm10-chrY	HAVANA	exon	4780287	4780353	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000187566.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28356-202"; exon_number 4; exon_id "ENSMUSE00001331944.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119514.1";
mm10-chrY	HAVANA	exon	4779680	4779714	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000187566.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28356-202"; exon_number 5; exon_id "ENSMUSE00001331322.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119514.1";
mm10-chrY	HAVANA	exon	4772406	4772523	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000187566.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28356-202"; exon_number 6; exon_id "ENSMUSE00001335030.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119514.1";
mm10-chrY	HAVANA	exon	4771546	4771645	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000187566.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28356-202"; exon_number 7; exon_id "ENSMUSE00001322172.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119514.1";
mm10-chrY	HAVANA	exon	4769429	4769525	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000187566.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28356-202"; exon_number 8; exon_id "ENSMUSE00001332593.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119514.1";
mm10-chrY	HAVANA	exon	4768840	4769069	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000187566.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28356-202"; exon_number 9; exon_id "ENSMUSE00001327308.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119514.1";
mm10-chrY	HAVANA	transcript	4779382	4794934	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000186941.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "processed_transcript"; transcript_name "Gm28356-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119515.1";
mm10-chrY	HAVANA	exon	4794699	4794934	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000186941.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "processed_transcript"; transcript_name "Gm28356-201"; exon_number 1; exon_id "ENSMUSE00001334560.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119515.1";
mm10-chrY	HAVANA	exon	4793371	4793502	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000186941.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "processed_transcript"; transcript_name "Gm28356-201"; exon_number 2; exon_id "ENSMUSE00001323554.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119515.1";
mm10-chrY	HAVANA	exon	4787977	4788043	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000186941.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "processed_transcript"; transcript_name "Gm28356-201"; exon_number 3; exon_id "ENSMUSE00001326810.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119515.1";
mm10-chrY	HAVANA	exon	4787357	4787391	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000186941.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "processed_transcript"; transcript_name "Gm28356-201"; exon_number 4; exon_id "ENSMUSE00001327655.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119515.1";
mm10-chrY	HAVANA	exon	4783413	4783469	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000186941.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "processed_transcript"; transcript_name "Gm28356-201"; exon_number 5; exon_id "ENSMUSE00001319900.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119515.1";
mm10-chrY	HAVANA	exon	4780287	4780353	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000186941.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "processed_transcript"; transcript_name "Gm28356-201"; exon_number 6; exon_id "ENSMUSE00001331944.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119515.1";
mm10-chrY	HAVANA	exon	4779382	4779714	.	-	.	gene_id "ENSMUSG00000099684.6"; transcript_id "ENSMUST00000186941.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28356"; transcript_type "processed_transcript"; transcript_name "Gm28356-201"; exon_number 7; exon_id "ENSMUSE00001327573.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045628.1"; havana_transcript "OTTMUST00000119515.1";
mm10-chrY	HAVANA	gene	4885200	4887558	.	-	.	gene_id "ENSMUSG00000100984.1"; gene_type "lincRNA"; gene_name "Gm28357"; level 2; havana_gene "OTTMUSG00000045629.1";
mm10-chrY	HAVANA	transcript	4885200	4887558	.	-	.	gene_id "ENSMUSG00000100984.1"; transcript_id "ENSMUST00000190256.1"; gene_type "lincRNA"; gene_name "Gm28357"; transcript_type "lincRNA"; transcript_name "Gm28357-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045629.1"; havana_transcript "OTTMUST00000119516.1";
mm10-chrY	HAVANA	exon	4887373	4887558	.	-	.	gene_id "ENSMUSG00000100984.1"; transcript_id "ENSMUST00000190256.1"; gene_type "lincRNA"; gene_name "Gm28357"; transcript_type "lincRNA"; transcript_name "Gm28357-201"; exon_number 1; exon_id "ENSMUSE00001319836.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045629.1"; havana_transcript "OTTMUST00000119516.1";
mm10-chrY	HAVANA	exon	4886710	4886891	.	-	.	gene_id "ENSMUSG00000100984.1"; transcript_id "ENSMUST00000190256.1"; gene_type "lincRNA"; gene_name "Gm28357"; transcript_type "lincRNA"; transcript_name "Gm28357-201"; exon_number 2; exon_id "ENSMUSE00001332374.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045629.1"; havana_transcript "OTTMUST00000119516.1";
mm10-chrY	HAVANA	exon	4885797	4885981	.	-	.	gene_id "ENSMUSG00000100984.1"; transcript_id "ENSMUST00000190256.1"; gene_type "lincRNA"; gene_name "Gm28357"; transcript_type "lincRNA"; transcript_name "Gm28357-201"; exon_number 3; exon_id "ENSMUSE00001332160.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045629.1"; havana_transcript "OTTMUST00000119516.1";
mm10-chrY	HAVANA	exon	4885200	4885268	.	-	.	gene_id "ENSMUSG00000100984.1"; transcript_id "ENSMUST00000190256.1"; gene_type "lincRNA"; gene_name "Gm28357"; transcript_type "lincRNA"; transcript_name "Gm28357-201"; exon_number 4; exon_id "ENSMUSE00001326033.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045629.1"; havana_transcript "OTTMUST00000119516.1";
mm10-chrY	HAVANA	gene	4892859	4893402	.	-	.	gene_id "ENSMUSG00000100137.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29352"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045630.1";
mm10-chrY	HAVANA	transcript	4892859	4893402	.	-	.	gene_id "ENSMUSG00000100137.1"; transcript_id "ENSMUST00000188054.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29352"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29352-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045630.1"; havana_transcript "OTTMUST00000119517.1";
mm10-chrY	HAVANA	exon	4892859	4893402	.	-	.	gene_id "ENSMUSG00000100137.1"; transcript_id "ENSMUST00000188054.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29352"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29352-201"; exon_number 1; exon_id "ENSMUSE00001333773.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045630.1"; havana_transcript "OTTMUST00000119517.1";
mm10-chrY	HAVANA	gene	4903523	4904050	.	-	.	gene_id "ENSMUSG00000100958.1"; gene_type "lincRNA"; gene_name "Gm29351"; level 2; havana_gene "OTTMUSG00000045631.1";
mm10-chrY	HAVANA	transcript	4903523	4904050	.	-	.	gene_id "ENSMUSG00000100958.1"; transcript_id "ENSMUST00000191052.1"; gene_type "lincRNA"; gene_name "Gm29351"; transcript_type "lincRNA"; transcript_name "Gm29351-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045631.1"; havana_transcript "OTTMUST00000119518.1";
mm10-chrY	HAVANA	exon	4903946	4904050	.	-	.	gene_id "ENSMUSG00000100958.1"; transcript_id "ENSMUST00000191052.1"; gene_type "lincRNA"; gene_name "Gm29351"; transcript_type "lincRNA"; transcript_name "Gm29351-201"; exon_number 1; exon_id "ENSMUSE00001323210.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045631.1"; havana_transcript "OTTMUST00000119518.1";
mm10-chrY	HAVANA	exon	4903523	4903591	.	-	.	gene_id "ENSMUSG00000100958.1"; transcript_id "ENSMUST00000191052.1"; gene_type "lincRNA"; gene_name "Gm29351"; transcript_type "lincRNA"; transcript_name "Gm29351-201"; exon_number 2; exon_id "ENSMUSE00001321362.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045631.1"; havana_transcript "OTTMUST00000119518.1";
mm10-chrY	HAVANA	gene	4940856	4941396	.	-	.	gene_id "ENSMUSG00000099575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29350"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045632.1";
mm10-chrY	HAVANA	transcript	4940856	4941396	.	-	.	gene_id "ENSMUSG00000099575.1"; transcript_id "ENSMUST00000189141.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29350"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29350-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045632.1"; havana_transcript "OTTMUST00000119519.1";
mm10-chrY	HAVANA	exon	4940856	4941396	.	-	.	gene_id "ENSMUSG00000099575.1"; transcript_id "ENSMUST00000189141.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29350"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29350-201"; exon_number 1; exon_id "ENSMUSE00001330835.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045632.1"; havana_transcript "OTTMUST00000119519.1";
mm10-chrY	HAVANA	gene	4951400	4951897	.	-	.	gene_id "ENSMUSG00000100597.1"; gene_type "lincRNA"; gene_name "Gm29349"; level 2; havana_gene "OTTMUSG00000045633.1";
mm10-chrY	HAVANA	transcript	4951400	4951897	.	-	.	gene_id "ENSMUSG00000100597.1"; transcript_id "ENSMUST00000188692.1"; gene_type "lincRNA"; gene_name "Gm29349"; transcript_type "lincRNA"; transcript_name "Gm29349-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045633.1"; havana_transcript "OTTMUST00000119520.1";
mm10-chrY	HAVANA	exon	4951793	4951897	.	-	.	gene_id "ENSMUSG00000100597.1"; transcript_id "ENSMUST00000188692.1"; gene_type "lincRNA"; gene_name "Gm29349"; transcript_type "lincRNA"; transcript_name "Gm29349-201"; exon_number 1; exon_id "ENSMUSE00001321668.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045633.1"; havana_transcript "OTTMUST00000119520.1";
mm10-chrY	HAVANA	exon	4951400	4951468	.	-	.	gene_id "ENSMUSG00000100597.1"; transcript_id "ENSMUST00000188692.1"; gene_type "lincRNA"; gene_name "Gm29349"; transcript_type "lincRNA"; transcript_name "Gm29349-201"; exon_number 2; exon_id "ENSMUSE00001335883.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045633.1"; havana_transcript "OTTMUST00000119520.1";
mm10-chrY	HAVANA	gene	5002140	5002836	.	+	.	gene_id "ENSMUSG00000099410.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29355"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045634.1";
mm10-chrY	HAVANA	transcript	5002140	5002836	.	+	.	gene_id "ENSMUSG00000099410.1"; transcript_id "ENSMUST00000188178.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29355"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29355-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045634.1"; havana_transcript "OTTMUST00000119521.1";
mm10-chrY	HAVANA	exon	5002140	5002836	.	+	.	gene_id "ENSMUSG00000099410.1"; transcript_id "ENSMUST00000188178.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29355"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29355-201"; exon_number 1; exon_id "ENSMUSE00001329553.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045634.1"; havana_transcript "OTTMUST00000119521.1";
mm10-chrY	HAVANA	gene	5043937	5046265	.	+	.	gene_id "ENSMUSG00000093927.2"; gene_type "protein_coding"; gene_name "Gm20918"; level 2; havana_gene "OTTMUSG00000045635.1";
mm10-chrY	HAVANA	transcript	5043937	5046265	.	+	.	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000188637.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-202"; level 2; protein_id "ENSMUSP00000140003.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1"; havana_transcript "OTTMUST00000119522.1";
mm10-chrY	HAVANA	exon	5043937	5044059	.	+	.	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000188637.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-202"; exon_number 1; exon_id "ENSMUSE00001331126.1"; level 2; protein_id "ENSMUSP00000140003.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1"; havana_transcript "OTTMUST00000119522.1";
mm10-chrY	HAVANA	exon	5045162	5046265	.	+	.	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000188637.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-202"; exon_number 2; exon_id "ENSMUSE00001324015.1"; level 2; protein_id "ENSMUSP00000140003.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1"; havana_transcript "OTTMUST00000119522.1";
mm10-chrY	HAVANA	CDS	5045445	5046125	.	+	0	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000188637.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-202"; exon_number 2; exon_id "ENSMUSE00001324015.1"; level 2; protein_id "ENSMUSP00000140003.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1"; havana_transcript "OTTMUST00000119522.1";
mm10-chrY	HAVANA	start_codon	5045445	5045447	.	+	0	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000188637.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-202"; exon_number 2; exon_id "ENSMUSE00001324015.1"; level 2; protein_id "ENSMUSP00000140003.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1"; havana_transcript "OTTMUST00000119522.1";
mm10-chrY	HAVANA	stop_codon	5046126	5046128	.	+	0	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000188637.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-202"; exon_number 2; exon_id "ENSMUSE00001324015.1"; level 2; protein_id "ENSMUSP00000140003.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1"; havana_transcript "OTTMUST00000119522.1";
mm10-chrY	HAVANA	UTR	5043937	5044059	.	+	.	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000188637.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-202"; exon_number 1; exon_id "ENSMUSE00001331126.1"; level 2; protein_id "ENSMUSP00000140003.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1"; havana_transcript "OTTMUST00000119522.1";
mm10-chrY	HAVANA	UTR	5045162	5045444	.	+	.	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000188637.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-202"; exon_number 2; exon_id "ENSMUSE00001324015.1"; level 2; protein_id "ENSMUSP00000140003.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1"; havana_transcript "OTTMUST00000119522.1";
mm10-chrY	HAVANA	UTR	5046126	5046265	.	+	.	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000188637.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-202"; exon_number 2; exon_id "ENSMUSE00001324015.1"; level 2; protein_id "ENSMUSP00000140003.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1"; havana_transcript "OTTMUST00000119522.1";
mm10-chrY	ENSEMBL	transcript	5045445	5046128	.	+	.	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000179629.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-201"; level 3; protein_id "ENSMUSP00000136554.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1";
mm10-chrY	ENSEMBL	exon	5045445	5046128	.	+	.	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000179629.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-201"; exon_number 1; exon_id "ENSMUSE00001014484.1"; level 3; protein_id "ENSMUSP00000136554.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1";
mm10-chrY	ENSEMBL	CDS	5045445	5046125	.	+	0	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000179629.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-201"; exon_number 1; exon_id "ENSMUSE00001014484.1"; level 3; protein_id "ENSMUSP00000136554.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1";
mm10-chrY	ENSEMBL	start_codon	5045445	5045447	.	+	0	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000179629.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-201"; exon_number 1; exon_id "ENSMUSE00001014484.1"; level 3; protein_id "ENSMUSP00000136554.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1";
mm10-chrY	ENSEMBL	stop_codon	5046126	5046128	.	+	0	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000179629.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-201"; exon_number 1; exon_id "ENSMUSE00001014484.1"; level 3; protein_id "ENSMUSP00000136554.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1";
mm10-chrY	ENSEMBL	UTR	5046126	5046128	.	+	.	gene_id "ENSMUSG00000093927.2"; transcript_id "ENSMUST00000179629.1"; gene_type "protein_coding"; gene_name "Gm20918"; transcript_type "protein_coding"; transcript_name "Gm20918-201"; exon_number 1; exon_id "ENSMUSE00001014484.1"; level 3; protein_id "ENSMUSP00000136554.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045635.1";
mm10-chrY	HAVANA	gene	5146887	5147582	.	+	.	gene_id "ENSMUSG00000101212.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29354"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045636.1";
mm10-chrY	HAVANA	transcript	5146887	5147582	.	+	.	gene_id "ENSMUSG00000101212.1"; transcript_id "ENSMUST00000187613.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29354"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29354-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045636.1"; havana_transcript "OTTMUST00000119523.1";
mm10-chrY	HAVANA	exon	5146887	5147582	.	+	.	gene_id "ENSMUSG00000101212.1"; transcript_id "ENSMUST00000187613.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29354"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29354-201"; exon_number 1; exon_id "ENSMUSE00001330042.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045636.1"; havana_transcript "OTTMUST00000119523.1";
mm10-chrY	HAVANA	gene	5235231	5237553	.	-	.	gene_id "ENSMUSG00000101041.1"; gene_type "lincRNA"; gene_name "Gm29353"; level 2; havana_gene "OTTMUSG00000045637.1";
mm10-chrY	HAVANA	transcript	5235231	5237553	.	-	.	gene_id "ENSMUSG00000101041.1"; transcript_id "ENSMUST00000185801.1"; gene_type "lincRNA"; gene_name "Gm29353"; transcript_type "lincRNA"; transcript_name "Gm29353-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045637.1"; havana_transcript "OTTMUST00000119524.1";
mm10-chrY	HAVANA	exon	5237369	5237553	.	-	.	gene_id "ENSMUSG00000101041.1"; transcript_id "ENSMUST00000185801.1"; gene_type "lincRNA"; gene_name "Gm29353"; transcript_type "lincRNA"; transcript_name "Gm29353-201"; exon_number 1; exon_id "ENSMUSE00001322381.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045637.1"; havana_transcript "OTTMUST00000119524.1";
mm10-chrY	HAVANA	exon	5236725	5236906	.	-	.	gene_id "ENSMUSG00000101041.1"; transcript_id "ENSMUST00000185801.1"; gene_type "lincRNA"; gene_name "Gm29353"; transcript_type "lincRNA"; transcript_name "Gm29353-201"; exon_number 2; exon_id "ENSMUSE00001322672.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045637.1"; havana_transcript "OTTMUST00000119524.1";
mm10-chrY	HAVANA	exon	5235817	5236000	.	-	.	gene_id "ENSMUSG00000101041.1"; transcript_id "ENSMUST00000185801.1"; gene_type "lincRNA"; gene_name "Gm29353"; transcript_type "lincRNA"; transcript_name "Gm29353-201"; exon_number 3; exon_id "ENSMUSE00001327066.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045637.1"; havana_transcript "OTTMUST00000119524.1";
mm10-chrY	HAVANA	exon	5235231	5235299	.	-	.	gene_id "ENSMUSG00000101041.1"; transcript_id "ENSMUST00000185801.1"; gene_type "lincRNA"; gene_name "Gm29353"; transcript_type "lincRNA"; transcript_name "Gm29353-201"; exon_number 4; exon_id "ENSMUSE00001319428.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045637.1"; havana_transcript "OTTMUST00000119524.1";
mm10-chrY	ENSEMBL	gene	5248359	5249441	.	-	.	gene_id "ENSMUSG00000095693.1"; gene_type "protein_coding"; gene_name "Gm21820"; level 3;
mm10-chrY	ENSEMBL	transcript	5248359	5249441	.	-	.	gene_id "ENSMUSG00000095693.1"; transcript_id "ENSMUST00000179056.1"; gene_type "protein_coding"; gene_name "Gm21820"; transcript_type "protein_coding"; transcript_name "Gm21820-201"; level 3; protein_id "ENSMUSP00000136023.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	5248359	5249441	.	-	.	gene_id "ENSMUSG00000095693.1"; transcript_id "ENSMUST00000179056.1"; gene_type "protein_coding"; gene_name "Gm21820"; transcript_type "protein_coding"; transcript_name "Gm21820-201"; exon_number 1; exon_id "ENSMUSE00001075838.1"; level 3; protein_id "ENSMUSP00000136023.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	5248359	5249441	.	-	0	gene_id "ENSMUSG00000095693.1"; transcript_id "ENSMUST00000179056.1"; gene_type "protein_coding"; gene_name "Gm21820"; transcript_type "protein_coding"; transcript_name "Gm21820-201"; exon_number 1; exon_id "ENSMUSE00001075838.1"; level 3; protein_id "ENSMUSP00000136023.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	5249439	5249441	.	-	0	gene_id "ENSMUSG00000095693.1"; transcript_id "ENSMUST00000179056.1"; gene_type "protein_coding"; gene_name "Gm21820"; transcript_type "protein_coding"; transcript_name "Gm21820-201"; exon_number 1; exon_id "ENSMUSE00001075838.1"; level 3; protein_id "ENSMUSP00000136023.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	5286082	5286779	.	+	.	gene_id "ENSMUSG00000101611.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29357"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045638.1";
mm10-chrY	HAVANA	transcript	5286082	5286779	.	+	.	gene_id "ENSMUSG00000101611.1"; transcript_id "ENSMUST00000186877.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29357"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29357-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045638.1"; havana_transcript "OTTMUST00000119525.1";
mm10-chrY	HAVANA	exon	5286082	5286779	.	+	.	gene_id "ENSMUSG00000101611.1"; transcript_id "ENSMUST00000186877.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29357"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29357-201"; exon_number 1; exon_id "ENSMUSE00001320598.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045638.1"; havana_transcript "OTTMUST00000119525.1";
mm10-chrY	HAVANA	gene	5320598	5320970	.	+	.	gene_id "ENSMUSG00000101769.1"; gene_type "processed_pseudogene"; gene_name "Gm29356"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045639.1";
mm10-chrY	HAVANA	transcript	5320598	5320970	.	+	.	gene_id "ENSMUSG00000101769.1"; transcript_id "ENSMUST00000186935.1"; gene_type "processed_pseudogene"; gene_name "Gm29356"; transcript_type "processed_pseudogene"; transcript_name "Gm29356-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045639.1"; havana_transcript "OTTMUST00000119526.1";
mm10-chrY	HAVANA	exon	5320598	5320970	.	+	.	gene_id "ENSMUSG00000101769.1"; transcript_id "ENSMUST00000186935.1"; gene_type "processed_pseudogene"; gene_name "Gm29356"; transcript_type "processed_pseudogene"; transcript_name "Gm29356-201"; exon_number 1; exon_id "ENSMUSE00001318785.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045639.1"; havana_transcript "OTTMUST00000119526.1";
mm10-chrY	HAVANA	gene	5340177	5340875	.	+	.	gene_id "ENSMUSG00000100792.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29161"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045640.1";
mm10-chrY	HAVANA	transcript	5340177	5340875	.	+	.	gene_id "ENSMUSG00000100792.1"; transcript_id "ENSMUST00000188250.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29161"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29161-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045640.1"; havana_transcript "OTTMUST00000119527.1";
mm10-chrY	HAVANA	exon	5340177	5340875	.	+	.	gene_id "ENSMUSG00000100792.1"; transcript_id "ENSMUST00000188250.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29161"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29161-201"; exon_number 1; exon_id "ENSMUSE00001328640.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045640.1"; havana_transcript "OTTMUST00000119527.1";
mm10-chrY	HAVANA	gene	5383039	5383152	.	+	.	gene_id "ENSMUSG00000099766.1"; gene_type "processed_pseudogene"; gene_name "Gm28767"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045641.1";
mm10-chrY	HAVANA	transcript	5383039	5383152	.	+	.	gene_id "ENSMUSG00000099766.1"; transcript_id "ENSMUST00000188601.1"; gene_type "processed_pseudogene"; gene_name "Gm28767"; transcript_type "processed_pseudogene"; transcript_name "Gm28767-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045641.1"; havana_transcript "OTTMUST00000119528.1";
mm10-chrY	HAVANA	exon	5383039	5383152	.	+	.	gene_id "ENSMUSG00000099766.1"; transcript_id "ENSMUST00000188601.1"; gene_type "processed_pseudogene"; gene_name "Gm28767"; transcript_type "processed_pseudogene"; transcript_name "Gm28767-201"; exon_number 1; exon_id "ENSMUSE00001318681.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045641.1"; havana_transcript "OTTMUST00000119528.1";
mm10-chrY	HAVANA	gene	5391538	5392236	.	+	.	gene_id "ENSMUSG00000099726.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29160"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045642.1";
mm10-chrY	HAVANA	transcript	5391538	5392236	.	+	.	gene_id "ENSMUSG00000099726.1"; transcript_id "ENSMUST00000190094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29160"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29160-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045642.1"; havana_transcript "OTTMUST00000119529.1";
mm10-chrY	HAVANA	exon	5391538	5392236	.	+	.	gene_id "ENSMUSG00000099726.1"; transcript_id "ENSMUST00000190094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29160"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29160-201"; exon_number 1; exon_id "ENSMUSE00001325170.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045642.1"; havana_transcript "OTTMUST00000119529.1";
mm10-chrY	HAVANA	gene	5440160	5460208	.	-	.	gene_id "ENSMUSG00000101576.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20915"; level 2; havana_gene "OTTMUSG00000045643.1";
mm10-chrY	HAVANA	transcript	5440160	5460208	.	-	.	gene_id "ENSMUSG00000101576.1"; transcript_id "ENSMUST00000191575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20915"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20915-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045643.1"; havana_transcript "OTTMUST00000119530.1";
mm10-chrY	HAVANA	exon	5460142	5460208	.	-	.	gene_id "ENSMUSG00000101576.1"; transcript_id "ENSMUST00000191575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20915"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20915-201"; exon_number 1; exon_id "ENSMUSE00001327991.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045643.1"; havana_transcript "OTTMUST00000119530.1";
mm10-chrY	HAVANA	exon	5459519	5459553	.	-	.	gene_id "ENSMUSG00000101576.1"; transcript_id "ENSMUST00000191575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20915"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20915-201"; exon_number 2; exon_id "ENSMUSE00001327956.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045643.1"; havana_transcript "OTTMUST00000119530.1";
mm10-chrY	HAVANA	exon	5451526	5451592	.	-	.	gene_id "ENSMUSG00000101576.1"; transcript_id "ENSMUST00000191575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20915"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20915-201"; exon_number 3; exon_id "ENSMUSE00001335501.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045643.1"; havana_transcript "OTTMUST00000119530.1";
mm10-chrY	HAVANA	exon	5450884	5450918	.	-	.	gene_id "ENSMUSG00000101576.1"; transcript_id "ENSMUST00000191575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20915"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20915-201"; exon_number 4; exon_id "ENSMUSE00001332457.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045643.1"; havana_transcript "OTTMUST00000119530.1";
mm10-chrY	HAVANA	exon	5443589	5443706	.	-	.	gene_id "ENSMUSG00000101576.1"; transcript_id "ENSMUST00000191575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20915"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20915-201"; exon_number 5; exon_id "ENSMUSE00001327126.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045643.1"; havana_transcript "OTTMUST00000119530.1";
mm10-chrY	HAVANA	exon	5442749	5442848	.	-	.	gene_id "ENSMUSG00000101576.1"; transcript_id "ENSMUST00000191575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20915"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20915-201"; exon_number 6; exon_id "ENSMUSE00001323886.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045643.1"; havana_transcript "OTTMUST00000119530.1";
mm10-chrY	HAVANA	exon	5440637	5440735	.	-	.	gene_id "ENSMUSG00000101576.1"; transcript_id "ENSMUST00000191575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20915"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20915-201"; exon_number 7; exon_id "ENSMUSE00001333846.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045643.1"; havana_transcript "OTTMUST00000119530.1";
mm10-chrY	HAVANA	exon	5440160	5440301	.	-	.	gene_id "ENSMUSG00000101576.1"; transcript_id "ENSMUST00000191575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20915"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20915-201"; exon_number 8; exon_id "ENSMUSE00001318677.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045643.1"; havana_transcript "OTTMUST00000119530.1";
mm10-chrY	HAVANA	gene	5465722	5465955	.	+	.	gene_id "ENSMUSG00000102115.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28766"; level 2; havana_gene "OTTMUSG00000045644.1";
mm10-chrY	HAVANA	transcript	5465722	5465955	.	+	.	gene_id "ENSMUSG00000102115.1"; transcript_id "ENSMUST00000191086.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28766"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28766-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045644.1"; havana_transcript "OTTMUST00000119531.1";
mm10-chrY	HAVANA	exon	5465722	5465955	.	+	.	gene_id "ENSMUSG00000102115.1"; transcript_id "ENSMUST00000191086.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28766"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28766-201"; exon_number 1; exon_id "ENSMUSE00001329426.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045644.1"; havana_transcript "OTTMUST00000119531.1";
mm10-chrY	HAVANA	gene	5472490	5472868	.	-	.	gene_id "ENSMUSG00000102102.1"; gene_type "processed_pseudogene"; gene_name "Gm29159"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045645.1";
mm10-chrY	HAVANA	transcript	5472490	5472868	.	-	.	gene_id "ENSMUSG00000102102.1"; transcript_id "ENSMUST00000187969.1"; gene_type "processed_pseudogene"; gene_name "Gm29159"; transcript_type "processed_pseudogene"; transcript_name "Gm29159-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045645.1"; havana_transcript "OTTMUST00000119532.1";
mm10-chrY	HAVANA	exon	5472490	5472868	.	-	.	gene_id "ENSMUSG00000102102.1"; transcript_id "ENSMUST00000187969.1"; gene_type "processed_pseudogene"; gene_name "Gm29159"; transcript_type "processed_pseudogene"; transcript_name "Gm29159-201"; exon_number 1; exon_id "ENSMUSE00001324130.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045645.1"; havana_transcript "OTTMUST00000119532.1";
mm10-chrY	ENSEMBL	gene	5542752	5542861	.	+	.	gene_id "ENSMUSG00000098514.1"; gene_type "miRNA"; gene_name "Gm27663"; level 3;
mm10-chrY	ENSEMBL	transcript	5542752	5542861	.	+	.	gene_id "ENSMUSG00000098514.1"; transcript_id "ENSMUST00000184839.1"; gene_type "miRNA"; gene_name "Gm27663"; transcript_type "miRNA"; transcript_name "Gm27663-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	5542752	5542861	.	+	.	gene_id "ENSMUSG00000098514.1"; transcript_id "ENSMUST00000184839.1"; gene_type "miRNA"; gene_name "Gm27663"; transcript_type "miRNA"; transcript_name "Gm27663-201"; exon_number 1; exon_id "ENSMUSE00001316191.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	5617083	5620317	.	-	.	gene_id "ENSMUSG00000099761.1"; gene_type "lincRNA"; gene_name "Gm29158"; level 2; havana_gene "OTTMUSG00000045646.1";
mm10-chrY	HAVANA	transcript	5617083	5620317	.	-	.	gene_id "ENSMUSG00000099761.1"; transcript_id "ENSMUST00000186883.1"; gene_type "lincRNA"; gene_name "Gm29158"; transcript_type "lincRNA"; transcript_name "Gm29158-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045646.1"; havana_transcript "OTTMUST00000119533.1";
mm10-chrY	HAVANA	exon	5619680	5620317	.	-	.	gene_id "ENSMUSG00000099761.1"; transcript_id "ENSMUST00000186883.1"; gene_type "lincRNA"; gene_name "Gm29158"; transcript_type "lincRNA"; transcript_name "Gm29158-201"; exon_number 1; exon_id "ENSMUSE00001334110.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045646.1"; havana_transcript "OTTMUST00000119533.1";
mm10-chrY	HAVANA	exon	5619009	5619194	.	-	.	gene_id "ENSMUSG00000099761.1"; transcript_id "ENSMUST00000186883.1"; gene_type "lincRNA"; gene_name "Gm29158"; transcript_type "lincRNA"; transcript_name "Gm29158-201"; exon_number 2; exon_id "ENSMUSE00001335878.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045646.1"; havana_transcript "OTTMUST00000119533.1";
mm10-chrY	HAVANA	exon	5618099	5618279	.	-	.	gene_id "ENSMUSG00000099761.1"; transcript_id "ENSMUST00000186883.1"; gene_type "lincRNA"; gene_name "Gm29158"; transcript_type "lincRNA"; transcript_name "Gm29158-201"; exon_number 3; exon_id "ENSMUSE00001323729.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045646.1"; havana_transcript "OTTMUST00000119533.1";
mm10-chrY	HAVANA	exon	5617083	5617571	.	-	.	gene_id "ENSMUSG00000099761.1"; transcript_id "ENSMUST00000186883.1"; gene_type "lincRNA"; gene_name "Gm29158"; transcript_type "lincRNA"; transcript_name "Gm29158-201"; exon_number 4; exon_id "ENSMUSE00001332464.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045646.1"; havana_transcript "OTTMUST00000119533.1";
mm10-chrY	HAVANA	gene	5656986	5659574	.	+	.	gene_id "ENSMUSG00000096706.2"; gene_type "protein_coding"; gene_name "Gm21854"; level 2; havana_gene "OTTMUSG00000045647.2";
mm10-chrY	HAVANA	transcript	5656986	5659574	.	+	.	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000190391.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-202"; level 2; protein_id "ENSMUSP00000139409.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045647.2"; havana_transcript "OTTMUST00000119534.2";
mm10-chrY	HAVANA	exon	5656986	5657125	.	+	.	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000190391.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-202"; exon_number 1; exon_id "ENSMUSE00001335173.1"; level 2; protein_id "ENSMUSP00000139409.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045647.2"; havana_transcript "OTTMUST00000119534.2";
mm10-chrY	HAVANA	exon	5657350	5657731	.	+	.	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000190391.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-202"; exon_number 2; exon_id "ENSMUSE00001321598.1"; level 2; protein_id "ENSMUSP00000139409.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045647.2"; havana_transcript "OTTMUST00000119534.2";
mm10-chrY	HAVANA	exon	5658617	5659574	.	+	.	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000190391.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-202"; exon_number 3; exon_id "ENSMUSE00001325809.1"; level 2; protein_id "ENSMUSP00000139409.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045647.2"; havana_transcript "OTTMUST00000119534.2";
mm10-chrY	HAVANA	CDS	5658757	5659452	.	+	0	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000190391.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-202"; exon_number 3; exon_id "ENSMUSE00001325809.1"; level 2; protein_id "ENSMUSP00000139409.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045647.2"; havana_transcript "OTTMUST00000119534.2";
mm10-chrY	HAVANA	start_codon	5658757	5658759	.	+	0	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000190391.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-202"; exon_number 3; exon_id "ENSMUSE00001325809.1"; level 2; protein_id "ENSMUSP00000139409.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045647.2"; havana_transcript "OTTMUST00000119534.2";
mm10-chrY	HAVANA	stop_codon	5659453	5659455	.	+	0	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000190391.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-202"; exon_number 3; exon_id "ENSMUSE00001325809.1"; level 2; protein_id "ENSMUSP00000139409.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045647.2"; havana_transcript "OTTMUST00000119534.2";
mm10-chrY	HAVANA	UTR	5656986	5657125	.	+	.	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000190391.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-202"; exon_number 1; exon_id "ENSMUSE00001335173.1"; level 2; protein_id "ENSMUSP00000139409.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045647.2"; havana_transcript "OTTMUST00000119534.2";
mm10-chrY	HAVANA	UTR	5657350	5657731	.	+	.	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000190391.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-202"; exon_number 2; exon_id "ENSMUSE00001321598.1"; level 2; protein_id "ENSMUSP00000139409.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045647.2"; havana_transcript "OTTMUST00000119534.2";
mm10-chrY	HAVANA	UTR	5658617	5658756	.	+	.	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000190391.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-202"; exon_number 3; exon_id "ENSMUSE00001325809.1"; level 2; protein_id "ENSMUSP00000139409.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045647.2"; havana_transcript "OTTMUST00000119534.2";
mm10-chrY	HAVANA	UTR	5659453	5659574	.	+	.	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000190391.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-202"; exon_number 3; exon_id "ENSMUSE00001325809.1"; level 2; protein_id "ENSMUSP00000139409.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045647.2"; havana_transcript "OTTMUST00000119534.2";
mm10-chrY	ENSEMBL	transcript	5658985	5659455	.	+	.	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000179901.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-201"; level 3; protein_id "ENSMUSP00000136526.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045647.2";
mm10-chrY	ENSEMBL	exon	5658985	5659455	.	+	.	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000179901.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-201"; exon_number 1; exon_id "ENSMUSE00001019416.1"; level 3; protein_id "ENSMUSP00000136526.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045647.2";
mm10-chrY	ENSEMBL	CDS	5658985	5659452	.	+	0	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000179901.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-201"; exon_number 1; exon_id "ENSMUSE00001019416.1"; level 3; protein_id "ENSMUSP00000136526.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045647.2";
mm10-chrY	ENSEMBL	stop_codon	5659453	5659455	.	+	0	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000179901.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-201"; exon_number 1; exon_id "ENSMUSE00001019416.1"; level 3; protein_id "ENSMUSP00000136526.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045647.2";
mm10-chrY	ENSEMBL	UTR	5659453	5659455	.	+	.	gene_id "ENSMUSG00000096706.2"; transcript_id "ENSMUST00000179901.1"; gene_type "protein_coding"; gene_name "Gm21854"; transcript_type "protein_coding"; transcript_name "Gm21854-201"; exon_number 1; exon_id "ENSMUSE00001019416.1"; level 3; protein_id "ENSMUSP00000136526.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045647.2";
mm10-chrY	HAVANA	gene	5682517	5682894	.	+	.	gene_id "ENSMUSG00000101805.1"; gene_type "processed_pseudogene"; gene_name "Gm28768"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045648.1";
mm10-chrY	HAVANA	transcript	5682517	5682894	.	+	.	gene_id "ENSMUSG00000101805.1"; transcript_id "ENSMUST00000189034.1"; gene_type "processed_pseudogene"; gene_name "Gm28768"; transcript_type "processed_pseudogene"; transcript_name "Gm28768-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045648.1"; havana_transcript "OTTMUST00000119535.1";
mm10-chrY	HAVANA	exon	5682517	5682894	.	+	.	gene_id "ENSMUSG00000101805.1"; transcript_id "ENSMUST00000189034.1"; gene_type "processed_pseudogene"; gene_name "Gm28768"; transcript_type "processed_pseudogene"; transcript_name "Gm28768-201"; exon_number 1; exon_id "ENSMUSE00001332316.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045648.1"; havana_transcript "OTTMUST00000119535.1";
mm10-chrY	HAVANA	gene	5695785	5696399	.	+	.	gene_id "ENSMUSG00000101380.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28769"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045649.1";
mm10-chrY	HAVANA	transcript	5695785	5696399	.	+	.	gene_id "ENSMUSG00000101380.1"; transcript_id "ENSMUST00000190176.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28769"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28769-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045649.1"; havana_transcript "OTTMUST00000119536.1";
mm10-chrY	HAVANA	exon	5695785	5696399	.	+	.	gene_id "ENSMUSG00000101380.1"; transcript_id "ENSMUST00000190176.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28769"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28769-201"; exon_number 1; exon_id "ENSMUSE00001334206.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045649.1"; havana_transcript "OTTMUST00000119536.1";
mm10-chrY	HAVANA	gene	5725978	5728317	.	+	.	gene_id "ENSMUSG00000096268.2"; gene_type "protein_coding"; gene_name "Gm20914"; level 2; havana_gene "OTTMUSG00000045650.2";
mm10-chrY	HAVANA	transcript	5725978	5728317	.	+	.	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000188887.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-202"; level 2; protein_id "ENSMUSP00000139808.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2"; havana_transcript "OTTMUST00000119537.2";
mm10-chrY	HAVANA	exon	5725978	5726102	.	+	.	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000188887.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-202"; exon_number 1; exon_id "ENSMUSE00001318245.1"; level 2; protein_id "ENSMUSP00000139808.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2"; havana_transcript "OTTMUST00000119537.2";
mm10-chrY	HAVANA	exon	5727215	5728317	.	+	.	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000188887.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-202"; exon_number 2; exon_id "ENSMUSE00001336103.1"; level 2; protein_id "ENSMUSP00000139808.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2"; havana_transcript "OTTMUST00000119537.2";
mm10-chrY	HAVANA	CDS	5727496	5728176	.	+	0	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000188887.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-202"; exon_number 2; exon_id "ENSMUSE00001336103.1"; level 2; protein_id "ENSMUSP00000139808.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2"; havana_transcript "OTTMUST00000119537.2";
mm10-chrY	HAVANA	start_codon	5727496	5727498	.	+	0	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000188887.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-202"; exon_number 2; exon_id "ENSMUSE00001336103.1"; level 2; protein_id "ENSMUSP00000139808.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2"; havana_transcript "OTTMUST00000119537.2";
mm10-chrY	HAVANA	stop_codon	5728177	5728179	.	+	0	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000188887.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-202"; exon_number 2; exon_id "ENSMUSE00001336103.1"; level 2; protein_id "ENSMUSP00000139808.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2"; havana_transcript "OTTMUST00000119537.2";
mm10-chrY	HAVANA	UTR	5725978	5726102	.	+	.	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000188887.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-202"; exon_number 1; exon_id "ENSMUSE00001318245.1"; level 2; protein_id "ENSMUSP00000139808.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2"; havana_transcript "OTTMUST00000119537.2";
mm10-chrY	HAVANA	UTR	5727215	5727495	.	+	.	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000188887.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-202"; exon_number 2; exon_id "ENSMUSE00001336103.1"; level 2; protein_id "ENSMUSP00000139808.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2"; havana_transcript "OTTMUST00000119537.2";
mm10-chrY	HAVANA	UTR	5728177	5728317	.	+	.	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000188887.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-202"; exon_number 2; exon_id "ENSMUSE00001336103.1"; level 2; protein_id "ENSMUSP00000139808.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2"; havana_transcript "OTTMUST00000119537.2";
mm10-chrY	ENSEMBL	transcript	5727496	5728179	.	+	.	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000180372.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-201"; level 3; protein_id "ENSMUSP00000136243.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2";
mm10-chrY	ENSEMBL	exon	5727496	5728179	.	+	.	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000180372.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-201"; exon_number 1; exon_id "ENSMUSE00001092704.1"; level 3; protein_id "ENSMUSP00000136243.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2";
mm10-chrY	ENSEMBL	CDS	5727496	5728176	.	+	0	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000180372.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-201"; exon_number 1; exon_id "ENSMUSE00001092704.1"; level 3; protein_id "ENSMUSP00000136243.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2";
mm10-chrY	ENSEMBL	start_codon	5727496	5727498	.	+	0	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000180372.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-201"; exon_number 1; exon_id "ENSMUSE00001092704.1"; level 3; protein_id "ENSMUSP00000136243.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2";
mm10-chrY	ENSEMBL	stop_codon	5728177	5728179	.	+	0	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000180372.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-201"; exon_number 1; exon_id "ENSMUSE00001092704.1"; level 3; protein_id "ENSMUSP00000136243.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2";
mm10-chrY	ENSEMBL	UTR	5728177	5728179	.	+	.	gene_id "ENSMUSG00000096268.2"; transcript_id "ENSMUST00000180372.1"; gene_type "protein_coding"; gene_name "Gm20914"; transcript_type "protein_coding"; transcript_name "Gm20914-201"; exon_number 1; exon_id "ENSMUSE00001092704.1"; level 3; protein_id "ENSMUSP00000136243.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045650.2";
mm10-chrY	HAVANA	gene	5793395	5795728	.	+	.	gene_id "ENSMUSG00000100634.1"; gene_type "protein_coding"; gene_name "Gm28171"; level 2; havana_gene "OTTMUSG00000045657.2";
mm10-chrY	HAVANA	transcript	5793395	5795728	.	+	.	gene_id "ENSMUSG00000100634.1"; transcript_id "ENSMUST00000190100.1"; gene_type "protein_coding"; gene_name "Gm28171"; transcript_type "protein_coding"; transcript_name "Gm28171-201"; level 2; protein_id "ENSMUSP00000140005.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045657.2"; havana_transcript "OTTMUST00000119552.2";
mm10-chrY	HAVANA	exon	5793395	5793518	.	+	.	gene_id "ENSMUSG00000100634.1"; transcript_id "ENSMUST00000190100.1"; gene_type "protein_coding"; gene_name "Gm28171"; transcript_type "protein_coding"; transcript_name "Gm28171-201"; exon_number 1; exon_id "ENSMUSE00001335681.1"; level 2; protein_id "ENSMUSP00000140005.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045657.2"; havana_transcript "OTTMUST00000119552.2";
mm10-chrY	HAVANA	exon	5794627	5795728	.	+	.	gene_id "ENSMUSG00000100634.1"; transcript_id "ENSMUST00000190100.1"; gene_type "protein_coding"; gene_name "Gm28171"; transcript_type "protein_coding"; transcript_name "Gm28171-201"; exon_number 2; exon_id "ENSMUSE00001323024.1"; level 2; protein_id "ENSMUSP00000140005.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045657.2"; havana_transcript "OTTMUST00000119552.2";
mm10-chrY	HAVANA	CDS	5794909	5795589	.	+	0	gene_id "ENSMUSG00000100634.1"; transcript_id "ENSMUST00000190100.1"; gene_type "protein_coding"; gene_name "Gm28171"; transcript_type "protein_coding"; transcript_name "Gm28171-201"; exon_number 2; exon_id "ENSMUSE00001323024.1"; level 2; protein_id "ENSMUSP00000140005.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045657.2"; havana_transcript "OTTMUST00000119552.2";
mm10-chrY	HAVANA	start_codon	5794909	5794911	.	+	0	gene_id "ENSMUSG00000100634.1"; transcript_id "ENSMUST00000190100.1"; gene_type "protein_coding"; gene_name "Gm28171"; transcript_type "protein_coding"; transcript_name "Gm28171-201"; exon_number 2; exon_id "ENSMUSE00001323024.1"; level 2; protein_id "ENSMUSP00000140005.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045657.2"; havana_transcript "OTTMUST00000119552.2";
mm10-chrY	HAVANA	stop_codon	5795590	5795592	.	+	0	gene_id "ENSMUSG00000100634.1"; transcript_id "ENSMUST00000190100.1"; gene_type "protein_coding"; gene_name "Gm28171"; transcript_type "protein_coding"; transcript_name "Gm28171-201"; exon_number 2; exon_id "ENSMUSE00001323024.1"; level 2; protein_id "ENSMUSP00000140005.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045657.2"; havana_transcript "OTTMUST00000119552.2";
mm10-chrY	HAVANA	UTR	5793395	5793518	.	+	.	gene_id "ENSMUSG00000100634.1"; transcript_id "ENSMUST00000190100.1"; gene_type "protein_coding"; gene_name "Gm28171"; transcript_type "protein_coding"; transcript_name "Gm28171-201"; exon_number 1; exon_id "ENSMUSE00001335681.1"; level 2; protein_id "ENSMUSP00000140005.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045657.2"; havana_transcript "OTTMUST00000119552.2";
mm10-chrY	HAVANA	UTR	5794627	5794908	.	+	.	gene_id "ENSMUSG00000100634.1"; transcript_id "ENSMUST00000190100.1"; gene_type "protein_coding"; gene_name "Gm28171"; transcript_type "protein_coding"; transcript_name "Gm28171-201"; exon_number 2; exon_id "ENSMUSE00001323024.1"; level 2; protein_id "ENSMUSP00000140005.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045657.2"; havana_transcript "OTTMUST00000119552.2";
mm10-chrY	HAVANA	UTR	5795590	5795728	.	+	.	gene_id "ENSMUSG00000100634.1"; transcript_id "ENSMUST00000190100.1"; gene_type "protein_coding"; gene_name "Gm28171"; transcript_type "protein_coding"; transcript_name "Gm28171-201"; exon_number 2; exon_id "ENSMUSE00001323024.1"; level 2; protein_id "ENSMUSP00000140005.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045657.2"; havana_transcript "OTTMUST00000119552.2";
mm10-chrY	HAVANA	gene	5899578	5902813	.	-	.	gene_id "ENSMUSG00000100056.1"; gene_type "lincRNA"; gene_name "Gm28173"; level 2; havana_gene "OTTMUSG00000045658.1";
mm10-chrY	HAVANA	transcript	5899578	5902813	.	-	.	gene_id "ENSMUSG00000100056.1"; transcript_id "ENSMUST00000191190.1"; gene_type "lincRNA"; gene_name "Gm28173"; transcript_type "lincRNA"; transcript_name "Gm28173-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045658.1"; havana_transcript "OTTMUST00000119553.1";
mm10-chrY	HAVANA	exon	5902177	5902813	.	-	.	gene_id "ENSMUSG00000100056.1"; transcript_id "ENSMUST00000191190.1"; gene_type "lincRNA"; gene_name "Gm28173"; transcript_type "lincRNA"; transcript_name "Gm28173-201"; exon_number 1; exon_id "ENSMUSE00001320925.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045658.1"; havana_transcript "OTTMUST00000119553.1";
mm10-chrY	HAVANA	exon	5901506	5901691	.	-	.	gene_id "ENSMUSG00000100056.1"; transcript_id "ENSMUST00000191190.1"; gene_type "lincRNA"; gene_name "Gm28173"; transcript_type "lincRNA"; transcript_name "Gm28173-201"; exon_number 2; exon_id "ENSMUSE00001326496.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045658.1"; havana_transcript "OTTMUST00000119553.1";
mm10-chrY	HAVANA	exon	5900594	5900777	.	-	.	gene_id "ENSMUSG00000100056.1"; transcript_id "ENSMUST00000191190.1"; gene_type "lincRNA"; gene_name "Gm28173"; transcript_type "lincRNA"; transcript_name "Gm28173-201"; exon_number 3; exon_id "ENSMUSE00001323395.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045658.1"; havana_transcript "OTTMUST00000119553.1";
mm10-chrY	HAVANA	exon	5899578	5900066	.	-	.	gene_id "ENSMUSG00000100056.1"; transcript_id "ENSMUST00000191190.1"; gene_type "lincRNA"; gene_name "Gm28173"; transcript_type "lincRNA"; transcript_name "Gm28173-201"; exon_number 4; exon_id "ENSMUSE00001323635.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045658.1"; havana_transcript "OTTMUST00000119553.1";
mm10-chrY	HAVANA	gene	5912031	5915279	.	-	.	gene_id "ENSMUSG00000102338.1"; gene_type "TEC"; gene_name "Gm37236"; level 2; havana_gene "OTTMUSG00000045659.1";
mm10-chrY	HAVANA	transcript	5912031	5915279	.	-	.	gene_id "ENSMUSG00000102338.1"; transcript_id "ENSMUST00000193670.1"; gene_type "TEC"; gene_name "Gm37236"; transcript_type "TEC"; transcript_name "Gm37236-201"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045659.1"; havana_transcript "OTTMUST00000119554.1";
mm10-chrY	HAVANA	exon	5912031	5915279	.	-	.	gene_id "ENSMUSG00000102338.1"; transcript_id "ENSMUST00000193670.1"; gene_type "TEC"; gene_name "Gm37236"; transcript_type "TEC"; transcript_name "Gm37236-201"; exon_number 1; exon_id "ENSMUSE00001343184.1"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045659.1"; havana_transcript "OTTMUST00000119554.1";
mm10-chrY	HAVANA	gene	5934890	5938242	.	+	.	gene_id "ENSMUSG00000101291.1"; gene_type "lincRNA"; gene_name "Gm29194"; level 2; havana_gene "OTTMUSG00000045660.1";
mm10-chrY	HAVANA	transcript	5934890	5938242	.	+	.	gene_id "ENSMUSG00000101291.1"; transcript_id "ENSMUST00000189250.1"; gene_type "lincRNA"; gene_name "Gm29194"; transcript_type "lincRNA"; transcript_name "Gm29194-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045660.1"; havana_transcript "OTTMUST00000119555.1";
mm10-chrY	HAVANA	exon	5934890	5935112	.	+	.	gene_id "ENSMUSG00000101291.1"; transcript_id "ENSMUST00000189250.1"; gene_type "lincRNA"; gene_name "Gm29194"; transcript_type "lincRNA"; transcript_name "Gm29194-201"; exon_number 1; exon_id "ENSMUSE00001333970.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045660.1"; havana_transcript "OTTMUST00000119555.1";
mm10-chrY	HAVANA	exon	5936299	5938242	.	+	.	gene_id "ENSMUSG00000101291.1"; transcript_id "ENSMUST00000189250.1"; gene_type "lincRNA"; gene_name "Gm29194"; transcript_type "lincRNA"; transcript_name "Gm29194-201"; exon_number 2; exon_id "ENSMUSE00001319022.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045660.1"; havana_transcript "OTTMUST00000119555.1";
mm10-chrY	HAVANA	gene	5942460	5945031	.	+	.	gene_id "ENSMUSG00000096036.2"; gene_type "protein_coding"; gene_name "Gm21778"; level 2; havana_gene "OTTMUSG00000045661.2";
mm10-chrY	HAVANA	transcript	5942460	5945031	.	+	.	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000185926.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-202"; level 2; protein_id "ENSMUSP00000139442.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045661.2"; havana_transcript "OTTMUST00000119556.2";
mm10-chrY	HAVANA	exon	5942460	5942597	.	+	.	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000185926.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-202"; exon_number 1; exon_id "ENSMUSE00001321735.1"; level 2; protein_id "ENSMUSP00000139442.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045661.2"; havana_transcript "OTTMUST00000119556.2";
mm10-chrY	HAVANA	exon	5942822	5943203	.	+	.	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000185926.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-202"; exon_number 2; exon_id "ENSMUSE00001321802.1"; level 2; protein_id "ENSMUSP00000139442.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045661.2"; havana_transcript "OTTMUST00000119556.2";
mm10-chrY	HAVANA	exon	5944070	5945031	.	+	.	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000185926.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-202"; exon_number 3; exon_id "ENSMUSE00001333453.1"; level 2; protein_id "ENSMUSP00000139442.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045661.2"; havana_transcript "OTTMUST00000119556.2";
mm10-chrY	HAVANA	CDS	5944210	5944905	.	+	0	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000185926.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-202"; exon_number 3; exon_id "ENSMUSE00001333453.1"; level 2; protein_id "ENSMUSP00000139442.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045661.2"; havana_transcript "OTTMUST00000119556.2";
mm10-chrY	HAVANA	start_codon	5944210	5944212	.	+	0	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000185926.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-202"; exon_number 3; exon_id "ENSMUSE00001333453.1"; level 2; protein_id "ENSMUSP00000139442.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045661.2"; havana_transcript "OTTMUST00000119556.2";
mm10-chrY	HAVANA	stop_codon	5944906	5944908	.	+	0	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000185926.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-202"; exon_number 3; exon_id "ENSMUSE00001333453.1"; level 2; protein_id "ENSMUSP00000139442.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045661.2"; havana_transcript "OTTMUST00000119556.2";
mm10-chrY	HAVANA	UTR	5942460	5942597	.	+	.	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000185926.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-202"; exon_number 1; exon_id "ENSMUSE00001321735.1"; level 2; protein_id "ENSMUSP00000139442.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045661.2"; havana_transcript "OTTMUST00000119556.2";
mm10-chrY	HAVANA	UTR	5942822	5943203	.	+	.	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000185926.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-202"; exon_number 2; exon_id "ENSMUSE00001321802.1"; level 2; protein_id "ENSMUSP00000139442.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045661.2"; havana_transcript "OTTMUST00000119556.2";
mm10-chrY	HAVANA	UTR	5944070	5944209	.	+	.	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000185926.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-202"; exon_number 3; exon_id "ENSMUSE00001333453.1"; level 2; protein_id "ENSMUSP00000139442.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045661.2"; havana_transcript "OTTMUST00000119556.2";
mm10-chrY	HAVANA	UTR	5944906	5945031	.	+	.	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000185926.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-202"; exon_number 3; exon_id "ENSMUSE00001333453.1"; level 2; protein_id "ENSMUSP00000139442.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045661.2"; havana_transcript "OTTMUST00000119556.2";
mm10-chrY	ENSEMBL	transcript	5944438	5944908	.	+	.	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000178779.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-201"; level 3; protein_id "ENSMUSP00000136470.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045661.2";
mm10-chrY	ENSEMBL	exon	5944438	5944908	.	+	.	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000178779.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-201"; exon_number 1; exon_id "ENSMUSE00001090317.1"; level 3; protein_id "ENSMUSP00000136470.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045661.2";
mm10-chrY	ENSEMBL	CDS	5944438	5944905	.	+	0	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000178779.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-201"; exon_number 1; exon_id "ENSMUSE00001090317.1"; level 3; protein_id "ENSMUSP00000136470.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045661.2";
mm10-chrY	ENSEMBL	stop_codon	5944906	5944908	.	+	0	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000178779.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-201"; exon_number 1; exon_id "ENSMUSE00001090317.1"; level 3; protein_id "ENSMUSP00000136470.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045661.2";
mm10-chrY	ENSEMBL	UTR	5944906	5944908	.	+	.	gene_id "ENSMUSG00000096036.2"; transcript_id "ENSMUST00000178779.1"; gene_type "protein_coding"; gene_name "Gm21778"; transcript_type "protein_coding"; transcript_name "Gm21778-201"; exon_number 1; exon_id "ENSMUSE00001090317.1"; level 3; protein_id "ENSMUSP00000136470.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000045661.2";
mm10-chrY	HAVANA	gene	5973657	5974035	.	+	.	gene_id "ENSMUSG00000102042.1"; gene_type "processed_pseudogene"; gene_name "Gm29195"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045662.1";
mm10-chrY	HAVANA	transcript	5973657	5974035	.	+	.	gene_id "ENSMUSG00000102042.1"; transcript_id "ENSMUST00000189038.1"; gene_type "processed_pseudogene"; gene_name "Gm29195"; transcript_type "processed_pseudogene"; transcript_name "Gm29195-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045662.1"; havana_transcript "OTTMUST00000119557.1";
mm10-chrY	HAVANA	exon	5973657	5974035	.	+	.	gene_id "ENSMUSG00000102042.1"; transcript_id "ENSMUST00000189038.1"; gene_type "processed_pseudogene"; gene_name "Gm29195"; transcript_type "processed_pseudogene"; transcript_name "Gm29195-201"; exon_number 1; exon_id "ENSMUSE00001318693.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045662.1"; havana_transcript "OTTMUST00000119557.1";
mm10-chrY	HAVANA	gene	5986815	5987432	.	+	.	gene_id "ENSMUSG00000100878.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29196"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045663.1";
mm10-chrY	HAVANA	transcript	5986815	5987432	.	+	.	gene_id "ENSMUSG00000100878.1"; transcript_id "ENSMUST00000189239.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29196"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29196-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045663.1"; havana_transcript "OTTMUST00000119558.1";
mm10-chrY	HAVANA	exon	5986815	5987432	.	+	.	gene_id "ENSMUSG00000100878.1"; transcript_id "ENSMUST00000189239.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29196"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29196-201"; exon_number 1; exon_id "ENSMUSE00001318342.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045663.1"; havana_transcript "OTTMUST00000119558.1";
mm10-chrY	HAVANA	gene	5998624	5998731	.	-	.	gene_id "ENSMUSG00000099721.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28435"; level 2; havana_gene "OTTMUSG00000045664.1";
mm10-chrY	HAVANA	transcript	5998624	5998731	.	-	.	gene_id "ENSMUSG00000099721.1"; transcript_id "ENSMUST00000185496.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28435"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28435-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045664.1"; havana_transcript "OTTMUST00000119559.1";
mm10-chrY	HAVANA	exon	5998624	5998731	.	-	.	gene_id "ENSMUSG00000099721.1"; transcript_id "ENSMUST00000185496.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28435"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28435-201"; exon_number 1; exon_id "ENSMUSE00001330121.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045664.1"; havana_transcript "OTTMUST00000119559.1";
mm10-chrY	HAVANA	gene	6018394	6019091	.	+	.	gene_id "ENSMUSG00000101619.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28436"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045665.1";
mm10-chrY	HAVANA	transcript	6018394	6019091	.	+	.	gene_id "ENSMUSG00000101619.1"; transcript_id "ENSMUST00000186307.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28436"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28436-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045665.1"; havana_transcript "OTTMUST00000119560.1";
mm10-chrY	HAVANA	exon	6018394	6019091	.	+	.	gene_id "ENSMUSG00000101619.1"; transcript_id "ENSMUST00000186307.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28436"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28436-201"; exon_number 1; exon_id "ENSMUSE00001328656.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045665.1"; havana_transcript "OTTMUST00000119560.1";
mm10-chrY	HAVANA	gene	6084520	6085221	.	+	.	gene_id "ENSMUSG00000100710.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29197"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045666.1";
mm10-chrY	HAVANA	transcript	6084520	6085221	.	+	.	gene_id "ENSMUSG00000100710.1"; transcript_id "ENSMUST00000185922.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29197"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29197-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045666.1"; havana_transcript "OTTMUST00000119561.1";
mm10-chrY	HAVANA	exon	6084520	6085221	.	+	.	gene_id "ENSMUSG00000100710.1"; transcript_id "ENSMUST00000185922.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29197"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29197-201"; exon_number 1; exon_id "ENSMUSE00001321306.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045666.1"; havana_transcript "OTTMUST00000119561.1";
mm10-chrY	HAVANA	gene	6198427	6201677	.	-	.	gene_id "ENSMUSG00000100292.1"; gene_type "lincRNA"; gene_name "Gm29198"; level 2; havana_gene "OTTMUSG00000045667.1";
mm10-chrY	HAVANA	transcript	6198427	6201677	.	-	.	gene_id "ENSMUSG00000100292.1"; transcript_id "ENSMUST00000190102.1"; gene_type "lincRNA"; gene_name "Gm29198"; transcript_type "lincRNA"; transcript_name "Gm29198-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045667.1"; havana_transcript "OTTMUST00000119562.1";
mm10-chrY	HAVANA	exon	6201039	6201677	.	-	.	gene_id "ENSMUSG00000100292.1"; transcript_id "ENSMUST00000190102.1"; gene_type "lincRNA"; gene_name "Gm29198"; transcript_type "lincRNA"; transcript_name "Gm29198-201"; exon_number 1; exon_id "ENSMUSE00001318295.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045667.1"; havana_transcript "OTTMUST00000119562.1";
mm10-chrY	HAVANA	exon	6200357	6200555	.	-	.	gene_id "ENSMUSG00000100292.1"; transcript_id "ENSMUST00000190102.1"; gene_type "lincRNA"; gene_name "Gm29198"; transcript_type "lincRNA"; transcript_name "Gm29198-201"; exon_number 2; exon_id "ENSMUSE00001324514.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045667.1"; havana_transcript "OTTMUST00000119562.1";
mm10-chrY	HAVANA	exon	6199445	6199628	.	-	.	gene_id "ENSMUSG00000100292.1"; transcript_id "ENSMUST00000190102.1"; gene_type "lincRNA"; gene_name "Gm29198"; transcript_type "lincRNA"; transcript_name "Gm29198-201"; exon_number 3; exon_id "ENSMUSE00001328686.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045667.1"; havana_transcript "OTTMUST00000119562.1";
mm10-chrY	HAVANA	exon	6198427	6198916	.	-	.	gene_id "ENSMUSG00000100292.1"; transcript_id "ENSMUST00000190102.1"; gene_type "lincRNA"; gene_name "Gm29198"; transcript_type "lincRNA"; transcript_name "Gm29198-201"; exon_number 4; exon_id "ENSMUSE00001333995.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045667.1"; havana_transcript "OTTMUST00000119562.1";
mm10-chrY	HAVANA	gene	6220975	6246362	.	+	.	gene_id "ENSMUSG00000101081.1"; gene_type "lincRNA"; gene_name "Gm29193"; level 2; havana_gene "OTTMUSG00000045668.1";
mm10-chrY	HAVANA	transcript	6220975	6246362	.	+	.	gene_id "ENSMUSG00000101081.1"; transcript_id "ENSMUST00000187129.1"; gene_type "lincRNA"; gene_name "Gm29193"; transcript_type "lincRNA"; transcript_name "Gm29193-201"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045668.1"; havana_transcript "OTTMUST00000119563.1";
mm10-chrY	HAVANA	exon	6220975	6221034	.	+	.	gene_id "ENSMUSG00000101081.1"; transcript_id "ENSMUST00000187129.1"; gene_type "lincRNA"; gene_name "Gm29193"; transcript_type "lincRNA"; transcript_name "Gm29193-201"; exon_number 1; exon_id "ENSMUSE00001330527.1"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045668.1"; havana_transcript "OTTMUST00000119563.1";
mm10-chrY	HAVANA	exon	6224630	6224771	.	+	.	gene_id "ENSMUSG00000101081.1"; transcript_id "ENSMUST00000187129.1"; gene_type "lincRNA"; gene_name "Gm29193"; transcript_type "lincRNA"; transcript_name "Gm29193-201"; exon_number 2; exon_id "ENSMUSE00001319923.1"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045668.1"; havana_transcript "OTTMUST00000119563.1";
mm10-chrY	HAVANA	exon	6229698	6229789	.	+	.	gene_id "ENSMUSG00000101081.1"; transcript_id "ENSMUST00000187129.1"; gene_type "lincRNA"; gene_name "Gm29193"; transcript_type "lincRNA"; transcript_name "Gm29193-201"; exon_number 3; exon_id "ENSMUSE00001333664.1"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045668.1"; havana_transcript "OTTMUST00000119563.1";
mm10-chrY	HAVANA	exon	6231209	6231362	.	+	.	gene_id "ENSMUSG00000101081.1"; transcript_id "ENSMUST00000187129.1"; gene_type "lincRNA"; gene_name "Gm29193"; transcript_type "lincRNA"; transcript_name "Gm29193-201"; exon_number 4; exon_id "ENSMUSE00001332250.1"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045668.1"; havana_transcript "OTTMUST00000119563.1";
mm10-chrY	HAVANA	exon	6244583	6244735	.	+	.	gene_id "ENSMUSG00000101081.1"; transcript_id "ENSMUST00000187129.1"; gene_type "lincRNA"; gene_name "Gm29193"; transcript_type "lincRNA"; transcript_name "Gm29193-201"; exon_number 5; exon_id "ENSMUSE00001323675.1"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045668.1"; havana_transcript "OTTMUST00000119563.1";
mm10-chrY	HAVANA	exon	6246134	6246362	.	+	.	gene_id "ENSMUSG00000101081.1"; transcript_id "ENSMUST00000187129.1"; gene_type "lincRNA"; gene_name "Gm29193"; transcript_type "lincRNA"; transcript_name "Gm29193-201"; exon_number 6; exon_id "ENSMUSE00001321203.1"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045668.1"; havana_transcript "OTTMUST00000119563.1";
mm10-chrY	HAVANA	gene	6224822	6227191	.	-	.	gene_id "ENSMUSG00000099815.1"; gene_type "lincRNA"; gene_name "Gm28430"; level 2; havana_gene "OTTMUSG00000045669.1";
mm10-chrY	HAVANA	transcript	6224822	6227191	.	-	.	gene_id "ENSMUSG00000099815.1"; transcript_id "ENSMUST00000191031.1"; gene_type "lincRNA"; gene_name "Gm28430"; transcript_type "lincRNA"; transcript_name "Gm28430-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045669.1"; havana_transcript "OTTMUST00000119564.1";
mm10-chrY	HAVANA	exon	6226999	6227191	.	-	.	gene_id "ENSMUSG00000099815.1"; transcript_id "ENSMUST00000191031.1"; gene_type "lincRNA"; gene_name "Gm28430"; transcript_type "lincRNA"; transcript_name "Gm28430-201"; exon_number 1; exon_id "ENSMUSE00001334238.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045669.1"; havana_transcript "OTTMUST00000119564.1";
mm10-chrY	HAVANA	exon	6226329	6226510	.	-	.	gene_id "ENSMUSG00000099815.1"; transcript_id "ENSMUST00000191031.1"; gene_type "lincRNA"; gene_name "Gm28430"; transcript_type "lincRNA"; transcript_name "Gm28430-201"; exon_number 2; exon_id "ENSMUSE00001332664.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045669.1"; havana_transcript "OTTMUST00000119564.1";
mm10-chrY	HAVANA	exon	6225418	6225601	.	-	.	gene_id "ENSMUSG00000099815.1"; transcript_id "ENSMUST00000191031.1"; gene_type "lincRNA"; gene_name "Gm28430"; transcript_type "lincRNA"; transcript_name "Gm28430-201"; exon_number 3; exon_id "ENSMUSE00001334357.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045669.1"; havana_transcript "OTTMUST00000119564.1";
mm10-chrY	HAVANA	exon	6224822	6224890	.	-	.	gene_id "ENSMUSG00000099815.1"; transcript_id "ENSMUST00000191031.1"; gene_type "lincRNA"; gene_name "Gm28430"; transcript_type "lincRNA"; transcript_name "Gm28430-201"; exon_number 4; exon_id "ENSMUSE00001322034.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045669.1"; havana_transcript "OTTMUST00000119564.1";
mm10-chrY	ENSEMBL	gene	6237453	6237995	.	-	.	gene_id "ENSMUSG00000094346.1"; gene_type "protein_coding"; gene_name "Gm21746"; level 3;
mm10-chrY	ENSEMBL	transcript	6237453	6237995	.	-	.	gene_id "ENSMUSG00000094346.1"; transcript_id "ENSMUST00000177612.1"; gene_type "protein_coding"; gene_name "Gm21746"; transcript_type "protein_coding"; transcript_name "Gm21746-201"; level 3; protein_id "ENSMUSP00000136361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	6237453	6237995	.	-	.	gene_id "ENSMUSG00000094346.1"; transcript_id "ENSMUST00000177612.1"; gene_type "protein_coding"; gene_name "Gm21746"; transcript_type "protein_coding"; transcript_name "Gm21746-201"; exon_number 1; exon_id "ENSMUSE00001036310.1"; level 3; protein_id "ENSMUSP00000136361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	6237456	6237995	.	-	0	gene_id "ENSMUSG00000094346.1"; transcript_id "ENSMUST00000177612.1"; gene_type "protein_coding"; gene_name "Gm21746"; transcript_type "protein_coding"; transcript_name "Gm21746-201"; exon_number 1; exon_id "ENSMUSE00001036310.1"; level 3; protein_id "ENSMUSP00000136361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	6237993	6237995	.	-	0	gene_id "ENSMUSG00000094346.1"; transcript_id "ENSMUST00000177612.1"; gene_type "protein_coding"; gene_name "Gm21746"; transcript_type "protein_coding"; transcript_name "Gm21746-201"; exon_number 1; exon_id "ENSMUSE00001036310.1"; level 3; protein_id "ENSMUSP00000136361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	6237453	6237455	.	-	0	gene_id "ENSMUSG00000094346.1"; transcript_id "ENSMUST00000177612.1"; gene_type "protein_coding"; gene_name "Gm21746"; transcript_type "protein_coding"; transcript_name "Gm21746-201"; exon_number 1; exon_id "ENSMUSE00001036310.1"; level 3; protein_id "ENSMUSP00000136361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	6237453	6237455	.	-	.	gene_id "ENSMUSG00000094346.1"; transcript_id "ENSMUST00000177612.1"; gene_type "protein_coding"; gene_name "Gm21746"; transcript_type "protein_coding"; transcript_name "Gm21746-201"; exon_number 1; exon_id "ENSMUSE00001036310.1"; level 3; protein_id "ENSMUSP00000136361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	6259341	6262689	.	+	.	gene_id "ENSMUSG00000101525.1"; gene_type "lincRNA"; gene_name "Gm28593"; level 2; havana_gene "OTTMUSG00000045670.1";
mm10-chrY	HAVANA	transcript	6259341	6262689	.	+	.	gene_id "ENSMUSG00000101525.1"; transcript_id "ENSMUST00000190989.1"; gene_type "lincRNA"; gene_name "Gm28593"; transcript_type "lincRNA"; transcript_name "Gm28593-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045670.1"; havana_transcript "OTTMUST00000119565.1";
mm10-chrY	HAVANA	exon	6259341	6259563	.	+	.	gene_id "ENSMUSG00000101525.1"; transcript_id "ENSMUST00000190989.1"; gene_type "lincRNA"; gene_name "Gm28593"; transcript_type "lincRNA"; transcript_name "Gm28593-201"; exon_number 1; exon_id "ENSMUSE00001334824.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045670.1"; havana_transcript "OTTMUST00000119565.1";
mm10-chrY	HAVANA	exon	6260743	6262689	.	+	.	gene_id "ENSMUSG00000101525.1"; transcript_id "ENSMUST00000190989.1"; gene_type "lincRNA"; gene_name "Gm28593"; transcript_type "lincRNA"; transcript_name "Gm28593-201"; exon_number 2; exon_id "ENSMUSE00001329939.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045670.1"; havana_transcript "OTTMUST00000119565.1";
mm10-chrY	HAVANA	gene	6267098	6269548	.	+	.	gene_id "ENSMUSG00000095148.2"; gene_type "protein_coding"; gene_name "Gm20873"; level 2; havana_gene "OTTMUSG00000045671.1";
mm10-chrY	HAVANA	transcript	6267098	6269548	.	+	.	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000187857.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-202"; level 2; protein_id "ENSMUSP00000140138.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1"; havana_transcript "OTTMUST00000119566.1";
mm10-chrY	HAVANA	exon	6267098	6267288	.	+	.	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000187857.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-202"; exon_number 1; exon_id "ENSMUSE00001333611.1"; level 2; protein_id "ENSMUSP00000140138.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1"; havana_transcript "OTTMUST00000119566.1";
mm10-chrY	HAVANA	exon	6267513	6267699	.	+	.	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000187857.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-202"; exon_number 2; exon_id "ENSMUSE00001327333.1"; level 2; protein_id "ENSMUSP00000140138.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1"; havana_transcript "OTTMUST00000119566.1";
mm10-chrY	HAVANA	exon	6268585	6269548	.	+	.	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000187857.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-202"; exon_number 3; exon_id "ENSMUSE00001321461.1"; level 2; protein_id "ENSMUSP00000140138.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1"; havana_transcript "OTTMUST00000119566.1";
mm10-chrY	HAVANA	CDS	6268725	6269420	.	+	0	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000187857.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-202"; exon_number 3; exon_id "ENSMUSE00001321461.1"; level 2; protein_id "ENSMUSP00000140138.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1"; havana_transcript "OTTMUST00000119566.1";
mm10-chrY	HAVANA	start_codon	6268725	6268727	.	+	0	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000187857.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-202"; exon_number 3; exon_id "ENSMUSE00001321461.1"; level 2; protein_id "ENSMUSP00000140138.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1"; havana_transcript "OTTMUST00000119566.1";
mm10-chrY	HAVANA	stop_codon	6269421	6269423	.	+	0	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000187857.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-202"; exon_number 3; exon_id "ENSMUSE00001321461.1"; level 2; protein_id "ENSMUSP00000140138.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1"; havana_transcript "OTTMUST00000119566.1";
mm10-chrY	HAVANA	UTR	6267098	6267288	.	+	.	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000187857.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-202"; exon_number 1; exon_id "ENSMUSE00001333611.1"; level 2; protein_id "ENSMUSP00000140138.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1"; havana_transcript "OTTMUST00000119566.1";
mm10-chrY	HAVANA	UTR	6267513	6267699	.	+	.	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000187857.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-202"; exon_number 2; exon_id "ENSMUSE00001327333.1"; level 2; protein_id "ENSMUSP00000140138.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1"; havana_transcript "OTTMUST00000119566.1";
mm10-chrY	HAVANA	UTR	6268585	6268724	.	+	.	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000187857.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-202"; exon_number 3; exon_id "ENSMUSE00001321461.1"; level 2; protein_id "ENSMUSP00000140138.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1"; havana_transcript "OTTMUST00000119566.1";
mm10-chrY	HAVANA	UTR	6269421	6269548	.	+	.	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000187857.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-202"; exon_number 3; exon_id "ENSMUSE00001321461.1"; level 2; protein_id "ENSMUSP00000140138.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1"; havana_transcript "OTTMUST00000119566.1";
mm10-chrY	ENSEMBL	transcript	6268725	6269423	.	+	.	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000179410.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-201"; level 3; protein_id "ENSMUSP00000136403.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1";
mm10-chrY	ENSEMBL	exon	6268725	6269423	.	+	.	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000179410.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-201"; exon_number 1; exon_id "ENSMUSE00001090914.1"; level 3; protein_id "ENSMUSP00000136403.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1";
mm10-chrY	ENSEMBL	CDS	6268725	6269420	.	+	0	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000179410.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-201"; exon_number 1; exon_id "ENSMUSE00001090914.1"; level 3; protein_id "ENSMUSP00000136403.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1";
mm10-chrY	ENSEMBL	start_codon	6268725	6268727	.	+	0	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000179410.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-201"; exon_number 1; exon_id "ENSMUSE00001090914.1"; level 3; protein_id "ENSMUSP00000136403.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1";
mm10-chrY	ENSEMBL	stop_codon	6269421	6269423	.	+	0	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000179410.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-201"; exon_number 1; exon_id "ENSMUSE00001090914.1"; level 3; protein_id "ENSMUSP00000136403.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1";
mm10-chrY	ENSEMBL	UTR	6269421	6269423	.	+	.	gene_id "ENSMUSG00000095148.2"; transcript_id "ENSMUST00000179410.1"; gene_type "protein_coding"; gene_name "Gm20873"; transcript_type "protein_coding"; transcript_name "Gm20873-201"; exon_number 1; exon_id "ENSMUSE00001090914.1"; level 3; protein_id "ENSMUSP00000136403.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045671.1";
mm10-chrY	HAVANA	gene	6305733	6306431	.	+	.	gene_id "ENSMUSG00000101707.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28916"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045692.1";
mm10-chrY	HAVANA	transcript	6305733	6306431	.	+	.	gene_id "ENSMUSG00000101707.1"; transcript_id "ENSMUST00000186988.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28916"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28916-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045692.1"; havana_transcript "OTTMUST00000119607.1";
mm10-chrY	HAVANA	exon	6305733	6306431	.	+	.	gene_id "ENSMUSG00000101707.1"; transcript_id "ENSMUST00000186988.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28916"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28916-201"; exon_number 1; exon_id "ENSMUSE00001332996.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045692.1"; havana_transcript "OTTMUST00000119607.1";
mm10-chrY	HAVANA	gene	6368874	6369572	.	-	.	gene_id "ENSMUSG00000100275.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28915"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045693.1";
mm10-chrY	HAVANA	transcript	6368874	6369572	.	-	.	gene_id "ENSMUSG00000100275.1"; transcript_id "ENSMUST00000189145.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28915"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28915-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045693.1"; havana_transcript "OTTMUST00000119608.1";
mm10-chrY	HAVANA	exon	6368874	6369572	.	-	.	gene_id "ENSMUSG00000100275.1"; transcript_id "ENSMUST00000189145.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28915"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28915-201"; exon_number 1; exon_id "ENSMUSE00001332290.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045693.1"; havana_transcript "OTTMUST00000119608.1";
mm10-chrY	HAVANA	gene	6454156	6454854	.	-	.	gene_id "ENSMUSG00000100472.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28918"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045694.1";
mm10-chrY	HAVANA	transcript	6454156	6454854	.	-	.	gene_id "ENSMUSG00000100472.1"; transcript_id "ENSMUST00000188822.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28918"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28918-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045694.1"; havana_transcript "OTTMUST00000119609.1";
mm10-chrY	HAVANA	exon	6454156	6454854	.	-	.	gene_id "ENSMUSG00000100472.1"; transcript_id "ENSMUST00000188822.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28918"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28918-201"; exon_number 1; exon_id "ENSMUSE00001335533.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045694.1"; havana_transcript "OTTMUST00000119609.1";
mm10-chrY	HAVANA	gene	6576815	6577051	.	-	.	gene_id "ENSMUSG00000100289.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28917"; level 2; havana_gene "OTTMUSG00000045695.1";
mm10-chrY	HAVANA	transcript	6576815	6577051	.	-	.	gene_id "ENSMUSG00000100289.1"; transcript_id "ENSMUST00000187294.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28917"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28917-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045695.1"; havana_transcript "OTTMUST00000119610.1";
mm10-chrY	HAVANA	exon	6576815	6577051	.	-	.	gene_id "ENSMUSG00000100289.1"; transcript_id "ENSMUST00000187294.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28917"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28917-201"; exon_number 1; exon_id "ENSMUSE00001325207.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045695.1"; havana_transcript "OTTMUST00000119610.1";
mm10-chrY	HAVANA	gene	6583546	6615511	.	+	.	gene_id "ENSMUSG00000101243.1"; gene_type "protein_coding"; gene_name "Gm28919"; level 2; havana_gene "OTTMUSG00000045696.1";
mm10-chrY	HAVANA	transcript	6583546	6615511	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	exon	6583546	6583589	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 1; exon_id "ENSMUSE00001333617.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	exon	6584956	6585087	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 2; exon_id "ENSMUSE00001325242.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	CDS	6584970	6585087	.	+	0	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 2; exon_id "ENSMUSE00001325242.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	start_codon	6584970	6584972	.	+	0	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 2; exon_id "ENSMUSE00001325242.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	exon	6596322	6596388	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 3; exon_id "ENSMUSE00001333323.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	CDS	6596322	6596388	.	+	2	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 3; exon_id "ENSMUSE00001333323.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	exon	6596926	6596960	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 4; exon_id "ENSMUSE00001318866.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	CDS	6596926	6596960	.	+	1	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 4; exon_id "ENSMUSE00001318866.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	exon	6603993	6604059	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 5; exon_id "ENSMUSE00001326400.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	CDS	6603993	6604059	.	+	2	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 5; exon_id "ENSMUSE00001326400.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	exon	6604645	6604679	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 6; exon_id "ENSMUSE00001333667.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	CDS	6604645	6604679	.	+	1	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 6; exon_id "ENSMUSE00001333667.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	exon	6611818	6611935	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 7; exon_id "ENSMUSE00001328545.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	CDS	6611818	6611935	.	+	2	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 7; exon_id "ENSMUSE00001328545.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	exon	6612716	6612815	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 8; exon_id "ENSMUSE00001323455.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	CDS	6612716	6612815	.	+	1	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 8; exon_id "ENSMUSE00001323455.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	exon	6614831	6614929	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 9; exon_id "ENSMUSE00001332295.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	CDS	6614831	6614929	.	+	0	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 9; exon_id "ENSMUSE00001332295.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	exon	6615289	6615511	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 10; exon_id "ENSMUSE00001321179.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	CDS	6615289	6615369	.	+	0	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 10; exon_id "ENSMUSE00001321179.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	stop_codon	6615370	6615372	.	+	0	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 10; exon_id "ENSMUSE00001321179.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	UTR	6583546	6583589	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 1; exon_id "ENSMUSE00001333617.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	UTR	6584956	6584969	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 2; exon_id "ENSMUSE00001325242.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	UTR	6615370	6615511	.	+	.	gene_id "ENSMUSG00000101243.1"; transcript_id "ENSMUST00000190026.1"; gene_type "protein_coding"; gene_name "Gm28919"; transcript_type "protein_coding"; transcript_name "Gm28919-201"; exon_number 10; exon_id "ENSMUSE00001321179.1"; level 2; protein_id "ENSMUSP00000139611.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045696.1"; havana_transcript "OTTMUST00000119611.1";
mm10-chrY	HAVANA	gene	6680421	6682872	.	-	.	gene_id "ENSMUSG00000079806.2"; gene_type "protein_coding"; gene_name "Gm21719"; level 2; havana_gene "OTTMUSG00000045697.1";
mm10-chrY	HAVANA	transcript	6680421	6682872	.	-	.	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000189073.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-202"; level 2; protein_id "ENSMUSP00000139615.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1"; havana_transcript "OTTMUST00000119612.1";
mm10-chrY	HAVANA	exon	6682668	6682872	.	-	.	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000189073.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-202"; exon_number 1; exon_id "ENSMUSE00001330345.1"; level 2; protein_id "ENSMUSP00000139615.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1"; havana_transcript "OTTMUST00000119612.1";
mm10-chrY	HAVANA	exon	6682274	6682460	.	-	.	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000189073.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-202"; exon_number 2; exon_id "ENSMUSE00001331305.1"; level 2; protein_id "ENSMUSP00000139615.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1"; havana_transcript "OTTMUST00000119612.1";
mm10-chrY	HAVANA	exon	6680421	6681386	.	-	.	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000189073.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-202"; exon_number 3; exon_id "ENSMUSE00001332216.1"; level 2; protein_id "ENSMUSP00000139615.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1"; havana_transcript "OTTMUST00000119612.1";
mm10-chrY	HAVANA	CDS	6680554	6681243	.	-	0	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000189073.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-202"; exon_number 3; exon_id "ENSMUSE00001332216.1"; level 2; protein_id "ENSMUSP00000139615.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1"; havana_transcript "OTTMUST00000119612.1";
mm10-chrY	HAVANA	start_codon	6681241	6681243	.	-	0	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000189073.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-202"; exon_number 3; exon_id "ENSMUSE00001332216.1"; level 2; protein_id "ENSMUSP00000139615.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1"; havana_transcript "OTTMUST00000119612.1";
mm10-chrY	HAVANA	stop_codon	6680551	6680553	.	-	0	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000189073.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-202"; exon_number 3; exon_id "ENSMUSE00001332216.1"; level 2; protein_id "ENSMUSP00000139615.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1"; havana_transcript "OTTMUST00000119612.1";
mm10-chrY	HAVANA	UTR	6682668	6682872	.	-	.	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000189073.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-202"; exon_number 1; exon_id "ENSMUSE00001330345.1"; level 2; protein_id "ENSMUSP00000139615.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1"; havana_transcript "OTTMUST00000119612.1";
mm10-chrY	HAVANA	UTR	6682274	6682460	.	-	.	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000189073.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-202"; exon_number 2; exon_id "ENSMUSE00001331305.1"; level 2; protein_id "ENSMUSP00000139615.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1"; havana_transcript "OTTMUST00000119612.1";
mm10-chrY	HAVANA	UTR	6680421	6680553	.	-	.	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000189073.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-202"; exon_number 3; exon_id "ENSMUSE00001332216.1"; level 2; protein_id "ENSMUSP00000139615.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1"; havana_transcript "OTTMUST00000119612.1";
mm10-chrY	HAVANA	UTR	6681244	6681386	.	-	.	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000189073.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-202"; exon_number 3; exon_id "ENSMUSE00001332216.1"; level 2; protein_id "ENSMUSP00000139615.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1"; havana_transcript "OTTMUST00000119612.1";
mm10-chrY	ENSEMBL	transcript	6680551	6681243	.	-	.	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000115940.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-201"; level 3; protein_id "ENSMUSP00000129824.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1";
mm10-chrY	ENSEMBL	exon	6680551	6681243	.	-	.	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000115940.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-201"; exon_number 1; exon_id "ENSMUSE00000704783.1"; level 3; protein_id "ENSMUSP00000129824.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1";
mm10-chrY	ENSEMBL	CDS	6680554	6681243	.	-	0	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000115940.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-201"; exon_number 1; exon_id "ENSMUSE00000704783.1"; level 3; protein_id "ENSMUSP00000129824.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1";
mm10-chrY	ENSEMBL	start_codon	6681241	6681243	.	-	0	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000115940.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-201"; exon_number 1; exon_id "ENSMUSE00000704783.1"; level 3; protein_id "ENSMUSP00000129824.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1";
mm10-chrY	ENSEMBL	stop_codon	6680551	6680553	.	-	0	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000115940.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-201"; exon_number 1; exon_id "ENSMUSE00000704783.1"; level 3; protein_id "ENSMUSP00000129824.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1";
mm10-chrY	ENSEMBL	UTR	6680551	6680553	.	-	.	gene_id "ENSMUSG00000079806.2"; transcript_id "ENSMUST00000115940.1"; gene_type "protein_coding"; gene_name "Gm21719"; transcript_type "protein_coding"; transcript_name "Gm21719-201"; exon_number 1; exon_id "ENSMUSE00000704783.1"; level 3; protein_id "ENSMUSP00000129824.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045697.1";
mm10-chrY	HAVANA	gene	6694078	6694455	.	-	.	gene_id "ENSMUSG00000100479.1"; gene_type "processed_pseudogene"; gene_name "Gm28921"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045698.1";
mm10-chrY	HAVANA	transcript	6694078	6694455	.	-	.	gene_id "ENSMUSG00000100479.1"; transcript_id "ENSMUST00000190219.1"; gene_type "processed_pseudogene"; gene_name "Gm28921"; transcript_type "processed_pseudogene"; transcript_name "Gm28921-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045698.1"; havana_transcript "OTTMUST00000119613.1";
mm10-chrY	HAVANA	exon	6694078	6694455	.	-	.	gene_id "ENSMUSG00000100479.1"; transcript_id "ENSMUST00000190219.1"; gene_type "processed_pseudogene"; gene_name "Gm28921"; transcript_type "processed_pseudogene"; transcript_name "Gm28921-201"; exon_number 1; exon_id "ENSMUSE00001325636.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045698.1"; havana_transcript "OTTMUST00000119613.1";
mm10-chrY	HAVANA	gene	6717540	6718238	.	-	.	gene_id "ENSMUSG00000099352.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28920"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045699.1";
mm10-chrY	HAVANA	transcript	6717540	6718238	.	-	.	gene_id "ENSMUSG00000099352.1"; transcript_id "ENSMUST00000189957.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28920"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28920-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045699.1"; havana_transcript "OTTMUST00000119614.1";
mm10-chrY	HAVANA	exon	6717540	6718238	.	-	.	gene_id "ENSMUSG00000099352.1"; transcript_id "ENSMUST00000189957.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28920"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28920-201"; exon_number 1; exon_id "ENSMUSE00001324386.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045699.1"; havana_transcript "OTTMUST00000119614.1";
mm10-chrY	HAVANA	gene	6724211	6727474	.	-	.	gene_id "ENSMUSG00000101388.1"; gene_type "lincRNA"; gene_name "Gm28444"; level 2; havana_gene "OTTMUSG00000045700.1";
mm10-chrY	HAVANA	transcript	6724211	6727474	.	-	.	gene_id "ENSMUSG00000101388.1"; transcript_id "ENSMUST00000190777.1"; gene_type "lincRNA"; gene_name "Gm28444"; transcript_type "lincRNA"; transcript_name "Gm28444-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045700.1"; havana_transcript "OTTMUST00000119615.1";
mm10-chrY	HAVANA	exon	6727253	6727474	.	-	.	gene_id "ENSMUSG00000101388.1"; transcript_id "ENSMUST00000190777.1"; gene_type "lincRNA"; gene_name "Gm28444"; transcript_type "lincRNA"; transcript_name "Gm28444-201"; exon_number 1; exon_id "ENSMUSE00001324052.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045700.1"; havana_transcript "OTTMUST00000119615.1";
mm10-chrY	HAVANA	exon	6724211	6726125	.	-	.	gene_id "ENSMUSG00000101388.1"; transcript_id "ENSMUST00000190777.1"; gene_type "lincRNA"; gene_name "Gm28444"; transcript_type "lincRNA"; transcript_name "Gm28444-201"; exon_number 2; exon_id "ENSMUSE00001331809.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045700.1"; havana_transcript "OTTMUST00000119615.1";
mm10-chrY	HAVANA	gene	6870145	6870842	.	-	.	gene_id "ENSMUSG00000101055.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28443"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045701.1";
mm10-chrY	HAVANA	transcript	6870145	6870842	.	-	.	gene_id "ENSMUSG00000101055.1"; transcript_id "ENSMUST00000189081.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28443"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28443-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045701.1"; havana_transcript "OTTMUST00000119616.1";
mm10-chrY	HAVANA	exon	6870145	6870842	.	-	.	gene_id "ENSMUSG00000101055.1"; transcript_id "ENSMUST00000189081.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28443"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28443-201"; exon_number 1; exon_id "ENSMUSE00001335559.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045701.1"; havana_transcript "OTTMUST00000119616.1";
mm10-chrY	HAVANA	gene	6916300	6918282	.	-	.	gene_id "ENSMUSG00000096686.2"; gene_type "protein_coding"; gene_name "Gm20830"; level 2; havana_gene "OTTMUSG00000045702.2";
mm10-chrY	HAVANA	transcript	6916300	6918282	.	-	.	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000190426.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-202"; level 2; protein_id "ENSMUSP00000141026.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2"; havana_transcript "OTTMUST00000119617.2";
mm10-chrY	HAVANA	exon	6918161	6918282	.	-	.	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000190426.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-202"; exon_number 1; exon_id "ENSMUSE00001335077.1"; level 2; protein_id "ENSMUSP00000141026.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2"; havana_transcript "OTTMUST00000119617.2";
mm10-chrY	HAVANA	exon	6916300	6917398	.	-	.	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000190426.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-202"; exon_number 2; exon_id "ENSMUSE00001332786.1"; level 2; protein_id "ENSMUSP00000141026.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2"; havana_transcript "OTTMUST00000119617.2";
mm10-chrY	HAVANA	CDS	6916437	6917117	.	-	0	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000190426.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-202"; exon_number 2; exon_id "ENSMUSE00001332786.1"; level 2; protein_id "ENSMUSP00000141026.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2"; havana_transcript "OTTMUST00000119617.2";
mm10-chrY	HAVANA	start_codon	6917115	6917117	.	-	0	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000190426.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-202"; exon_number 2; exon_id "ENSMUSE00001332786.1"; level 2; protein_id "ENSMUSP00000141026.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2"; havana_transcript "OTTMUST00000119617.2";
mm10-chrY	HAVANA	stop_codon	6916434	6916436	.	-	0	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000190426.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-202"; exon_number 2; exon_id "ENSMUSE00001332786.1"; level 2; protein_id "ENSMUSP00000141026.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2"; havana_transcript "OTTMUST00000119617.2";
mm10-chrY	HAVANA	UTR	6918161	6918282	.	-	.	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000190426.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-202"; exon_number 1; exon_id "ENSMUSE00001335077.1"; level 2; protein_id "ENSMUSP00000141026.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2"; havana_transcript "OTTMUST00000119617.2";
mm10-chrY	HAVANA	UTR	6916300	6916436	.	-	.	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000190426.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-202"; exon_number 2; exon_id "ENSMUSE00001332786.1"; level 2; protein_id "ENSMUSP00000141026.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2"; havana_transcript "OTTMUST00000119617.2";
mm10-chrY	HAVANA	UTR	6917118	6917398	.	-	.	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000190426.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-202"; exon_number 2; exon_id "ENSMUSE00001332786.1"; level 2; protein_id "ENSMUSP00000141026.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2"; havana_transcript "OTTMUST00000119617.2";
mm10-chrY	ENSEMBL	transcript	6916434	6917117	.	-	.	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000178016.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-201"; level 3; protein_id "ENSMUSP00000135925.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2";
mm10-chrY	ENSEMBL	exon	6916434	6917117	.	-	.	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000178016.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-201"; exon_number 1; exon_id "ENSMUSE00000996390.1"; level 3; protein_id "ENSMUSP00000135925.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2";
mm10-chrY	ENSEMBL	CDS	6916437	6917117	.	-	0	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000178016.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-201"; exon_number 1; exon_id "ENSMUSE00000996390.1"; level 3; protein_id "ENSMUSP00000135925.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2";
mm10-chrY	ENSEMBL	start_codon	6917115	6917117	.	-	0	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000178016.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-201"; exon_number 1; exon_id "ENSMUSE00000996390.1"; level 3; protein_id "ENSMUSP00000135925.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2";
mm10-chrY	ENSEMBL	stop_codon	6916434	6916436	.	-	0	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000178016.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-201"; exon_number 1; exon_id "ENSMUSE00000996390.1"; level 3; protein_id "ENSMUSP00000135925.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2";
mm10-chrY	ENSEMBL	UTR	6916434	6916436	.	-	.	gene_id "ENSMUSG00000096686.2"; transcript_id "ENSMUST00000178016.1"; gene_type "protein_coding"; gene_name "Gm20830"; transcript_type "protein_coding"; transcript_name "Gm20830-201"; exon_number 1; exon_id "ENSMUSE00000996390.1"; level 3; protein_id "ENSMUSP00000135925.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045702.2";
mm10-chrY	HAVANA	gene	6952407	6952905	.	+	.	gene_id "ENSMUSG00000099505.1"; gene_type "lincRNA"; gene_name "Gm28442"; level 2; havana_gene "OTTMUSG00000045703.1";
mm10-chrY	HAVANA	transcript	6952407	6952905	.	+	.	gene_id "ENSMUSG00000099505.1"; transcript_id "ENSMUST00000187052.1"; gene_type "lincRNA"; gene_name "Gm28442"; transcript_type "lincRNA"; transcript_name "Gm28442-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045703.1"; havana_transcript "OTTMUST00000119618.1";
mm10-chrY	HAVANA	exon	6952407	6952511	.	+	.	gene_id "ENSMUSG00000099505.1"; transcript_id "ENSMUST00000187052.1"; gene_type "lincRNA"; gene_name "Gm28442"; transcript_type "lincRNA"; transcript_name "Gm28442-201"; exon_number 1; exon_id "ENSMUSE00001329175.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045703.1"; havana_transcript "OTTMUST00000119618.1";
mm10-chrY	HAVANA	exon	6952837	6952905	.	+	.	gene_id "ENSMUSG00000099505.1"; transcript_id "ENSMUST00000187052.1"; gene_type "lincRNA"; gene_name "Gm28442"; transcript_type "lincRNA"; transcript_name "Gm28442-201"; exon_number 2; exon_id "ENSMUSE00001323304.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045703.1"; havana_transcript "OTTMUST00000119618.1";
mm10-chrY	HAVANA	gene	6974976	6978213	.	+	.	gene_id "ENSMUSG00000100161.1"; gene_type "lincRNA"; gene_name "Gm28445"; level 2; havana_gene "OTTMUSG00000045704.1";
mm10-chrY	HAVANA	transcript	6974976	6978213	.	+	.	gene_id "ENSMUSG00000100161.1"; transcript_id "ENSMUST00000187686.1"; gene_type "lincRNA"; gene_name "Gm28445"; transcript_type "lincRNA"; transcript_name "Gm28445-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045704.1"; havana_transcript "OTTMUST00000119619.1";
mm10-chrY	HAVANA	exon	6974976	6975614	.	+	.	gene_id "ENSMUSG00000100161.1"; transcript_id "ENSMUST00000187686.1"; gene_type "lincRNA"; gene_name "Gm28445"; transcript_type "lincRNA"; transcript_name "Gm28445-201"; exon_number 1; exon_id "ENSMUSE00001324770.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045704.1"; havana_transcript "OTTMUST00000119619.1";
mm10-chrY	HAVANA	exon	6976098	6976283	.	+	.	gene_id "ENSMUSG00000100161.1"; transcript_id "ENSMUST00000187686.1"; gene_type "lincRNA"; gene_name "Gm28445"; transcript_type "lincRNA"; transcript_name "Gm28445-201"; exon_number 2; exon_id "ENSMUSE00001324656.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045704.1"; havana_transcript "OTTMUST00000119619.1";
mm10-chrY	HAVANA	exon	6977013	6977196	.	+	.	gene_id "ENSMUSG00000100161.1"; transcript_id "ENSMUST00000187686.1"; gene_type "lincRNA"; gene_name "Gm28445"; transcript_type "lincRNA"; transcript_name "Gm28445-201"; exon_number 3; exon_id "ENSMUSE00001324815.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045704.1"; havana_transcript "OTTMUST00000119619.1";
mm10-chrY	HAVANA	exon	6977725	6978213	.	+	.	gene_id "ENSMUSG00000100161.1"; transcript_id "ENSMUST00000187686.1"; gene_type "lincRNA"; gene_name "Gm28445"; transcript_type "lincRNA"; transcript_name "Gm28445-201"; exon_number 4; exon_id "ENSMUSE00001323296.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045704.1"; havana_transcript "OTTMUST00000119619.1";
mm10-chrY	HAVANA	gene	7027311	7028007	.	-	.	gene_id "ENSMUSG00000102039.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20788"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045705.1";
mm10-chrY	HAVANA	transcript	7027311	7028007	.	-	.	gene_id "ENSMUSG00000102039.1"; transcript_id "ENSMUST00000190538.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20788"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20788-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045705.1"; havana_transcript "OTTMUST00000119620.1";
mm10-chrY	HAVANA	exon	7027311	7028007	.	-	.	gene_id "ENSMUSG00000102039.1"; transcript_id "ENSMUST00000190538.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20788"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20788-201"; exon_number 1; exon_id "ENSMUSE00001333807.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045705.1"; havana_transcript "OTTMUST00000119620.1";
mm10-chrY	HAVANA	gene	7085143	7088378	.	+	.	gene_id "ENSMUSG00000101913.1"; gene_type "lincRNA"; gene_name "Gm28999"; level 2; havana_gene "OTTMUSG00000045866.1";
mm10-chrY	HAVANA	transcript	7085143	7088378	.	+	.	gene_id "ENSMUSG00000101913.1"; transcript_id "ENSMUST00000188063.1"; gene_type "lincRNA"; gene_name "Gm28999"; transcript_type "lincRNA"; transcript_name "Gm28999-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045866.1"; havana_transcript "OTTMUST00000119865.1";
mm10-chrY	HAVANA	exon	7085143	7085781	.	+	.	gene_id "ENSMUSG00000101913.1"; transcript_id "ENSMUST00000188063.1"; gene_type "lincRNA"; gene_name "Gm28999"; transcript_type "lincRNA"; transcript_name "Gm28999-201"; exon_number 1; exon_id "ENSMUSE00001333977.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045866.1"; havana_transcript "OTTMUST00000119865.1";
mm10-chrY	HAVANA	exon	7086265	7086450	.	+	.	gene_id "ENSMUSG00000101913.1"; transcript_id "ENSMUST00000188063.1"; gene_type "lincRNA"; gene_name "Gm28999"; transcript_type "lincRNA"; transcript_name "Gm28999-201"; exon_number 2; exon_id "ENSMUSE00001318015.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045866.1"; havana_transcript "OTTMUST00000119865.1";
mm10-chrY	HAVANA	exon	7087178	7087361	.	+	.	gene_id "ENSMUSG00000101913.1"; transcript_id "ENSMUST00000188063.1"; gene_type "lincRNA"; gene_name "Gm28999"; transcript_type "lincRNA"; transcript_name "Gm28999-201"; exon_number 3; exon_id "ENSMUSE00001333751.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045866.1"; havana_transcript "OTTMUST00000119865.1";
mm10-chrY	HAVANA	exon	7087890	7088378	.	+	.	gene_id "ENSMUSG00000101913.1"; transcript_id "ENSMUST00000188063.1"; gene_type "lincRNA"; gene_name "Gm28999"; transcript_type "lincRNA"; transcript_name "Gm28999-201"; exon_number 4; exon_id "ENSMUSE00001330624.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045866.1"; havana_transcript "OTTMUST00000119865.1";
mm10-chrY	HAVANA	gene	7165068	7169293	.	-	.	gene_id "ENSMUSG00000094484.2"; gene_type "protein_coding"; gene_name "Gm21244"; level 2; havana_gene "OTTMUSG00000045867.2";
mm10-chrY	HAVANA	transcript	7165068	7169293	.	-	.	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000189201.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-202"; level 2; protein_id "ENSMUSP00000139421.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2"; havana_transcript "OTTMUST00000119866.2";
mm10-chrY	HAVANA	exon	7169170	7169293	.	-	.	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000189201.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-202"; exon_number 1; exon_id "ENSMUSE00001320658.1"; level 2; protein_id "ENSMUSP00000139421.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2"; havana_transcript "OTTMUST00000119866.2";
mm10-chrY	HAVANA	exon	7165068	7168058	.	-	.	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000189201.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-202"; exon_number 2; exon_id "ENSMUSE00001321327.1"; level 2; protein_id "ENSMUSP00000139421.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2"; havana_transcript "OTTMUST00000119866.2";
mm10-chrY	HAVANA	CDS	7167097	7167777	.	-	0	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000189201.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-202"; exon_number 2; exon_id "ENSMUSE00001321327.1"; level 2; protein_id "ENSMUSP00000139421.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2"; havana_transcript "OTTMUST00000119866.2";
mm10-chrY	HAVANA	start_codon	7167775	7167777	.	-	0	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000189201.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-202"; exon_number 2; exon_id "ENSMUSE00001321327.1"; level 2; protein_id "ENSMUSP00000139421.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2"; havana_transcript "OTTMUST00000119866.2";
mm10-chrY	HAVANA	stop_codon	7167094	7167096	.	-	0	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000189201.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-202"; exon_number 2; exon_id "ENSMUSE00001321327.1"; level 2; protein_id "ENSMUSP00000139421.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2"; havana_transcript "OTTMUST00000119866.2";
mm10-chrY	HAVANA	UTR	7169170	7169293	.	-	.	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000189201.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-202"; exon_number 1; exon_id "ENSMUSE00001320658.1"; level 2; protein_id "ENSMUSP00000139421.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2"; havana_transcript "OTTMUST00000119866.2";
mm10-chrY	HAVANA	UTR	7165068	7167096	.	-	.	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000189201.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-202"; exon_number 2; exon_id "ENSMUSE00001321327.1"; level 2; protein_id "ENSMUSP00000139421.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2"; havana_transcript "OTTMUST00000119866.2";
mm10-chrY	HAVANA	UTR	7167778	7168058	.	-	.	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000189201.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-202"; exon_number 2; exon_id "ENSMUSE00001321327.1"; level 2; protein_id "ENSMUSP00000139421.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2"; havana_transcript "OTTMUST00000119866.2";
mm10-chrY	ENSEMBL	transcript	7167094	7167777	.	-	.	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000178447.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-201"; level 3; protein_id "ENSMUSP00000137217.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2";
mm10-chrY	ENSEMBL	exon	7167094	7167777	.	-	.	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000178447.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-201"; exon_number 1; exon_id "ENSMUSE00001036661.1"; level 3; protein_id "ENSMUSP00000137217.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2";
mm10-chrY	ENSEMBL	CDS	7167097	7167777	.	-	0	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000178447.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-201"; exon_number 1; exon_id "ENSMUSE00001036661.1"; level 3; protein_id "ENSMUSP00000137217.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2";
mm10-chrY	ENSEMBL	start_codon	7167775	7167777	.	-	0	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000178447.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-201"; exon_number 1; exon_id "ENSMUSE00001036661.1"; level 3; protein_id "ENSMUSP00000137217.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2";
mm10-chrY	ENSEMBL	stop_codon	7167094	7167096	.	-	0	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000178447.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-201"; exon_number 1; exon_id "ENSMUSE00001036661.1"; level 3; protein_id "ENSMUSP00000137217.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2";
mm10-chrY	ENSEMBL	UTR	7167094	7167096	.	-	.	gene_id "ENSMUSG00000094484.2"; transcript_id "ENSMUST00000178447.1"; gene_type "protein_coding"; gene_name "Gm21244"; transcript_type "protein_coding"; transcript_name "Gm21244-201"; exon_number 1; exon_id "ENSMUSE00001036661.1"; level 3; protein_id "ENSMUSP00000137217.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045867.2";
mm10-chrY	HAVANA	gene	7196381	7197172	.	+	.	gene_id "ENSMUSG00000101479.1"; gene_type "processed_pseudogene"; gene_name "Gm28997"; level 2; havana_gene "OTTMUSG00000045868.1";
mm10-chrY	HAVANA	transcript	7196381	7197172	.	+	.	gene_id "ENSMUSG00000101479.1"; transcript_id "ENSMUST00000188759.1"; gene_type "processed_pseudogene"; gene_name "Gm28997"; transcript_type "processed_pseudogene"; transcript_name "Gm28997-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045868.1"; havana_transcript "OTTMUST00000119867.1";
mm10-chrY	HAVANA	exon	7196381	7196470	.	+	.	gene_id "ENSMUSG00000101479.1"; transcript_id "ENSMUST00000188759.1"; gene_type "processed_pseudogene"; gene_name "Gm28997"; transcript_type "processed_pseudogene"; transcript_name "Gm28997-201"; exon_number 1; exon_id "ENSMUSE00001319554.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045868.1"; havana_transcript "OTTMUST00000119867.1";
mm10-chrY	HAVANA	exon	7196834	7197172	.	+	.	gene_id "ENSMUSG00000101479.1"; transcript_id "ENSMUST00000188759.1"; gene_type "processed_pseudogene"; gene_name "Gm28997"; transcript_type "processed_pseudogene"; transcript_name "Gm28997-201"; exon_number 2; exon_id "ENSMUSE00001320235.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000045868.1"; havana_transcript "OTTMUST00000119867.1";
mm10-chrY	HAVANA	gene	7253787	7280017	.	+	.	gene_id "ENSMUSG00000100939.1"; gene_type "protein_coding"; gene_name "Gm28998"; level 2; havana_gene "OTTMUSG00000045869.1";
mm10-chrY	HAVANA	transcript	7253787	7280017	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	exon	7253787	7253830	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 1; exon_id "ENSMUSE00001324778.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	exon	7255220	7255351	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 2; exon_id "ENSMUSE00001329512.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	CDS	7255234	7255351	.	+	0	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 2; exon_id "ENSMUSE00001329512.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	start_codon	7255234	7255236	.	+	0	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 2; exon_id "ENSMUSE00001329512.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	exon	7260674	7260740	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 3; exon_id "ENSMUSE00001334575.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	CDS	7260674	7260740	.	+	2	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 3; exon_id "ENSMUSE00001334575.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	exon	7261316	7261350	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 4; exon_id "ENSMUSE00001330196.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	CDS	7261316	7261350	.	+	1	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 4; exon_id "ENSMUSE00001330196.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	exon	7268401	7268467	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 5; exon_id "ENSMUSE00001324842.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	CDS	7268401	7268467	.	+	2	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 5; exon_id "ENSMUSE00001324842.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	exon	7269047	7269081	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 6; exon_id "ENSMUSE00001323924.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	CDS	7269047	7269081	.	+	1	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 6; exon_id "ENSMUSE00001323924.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	exon	7276282	7276399	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 7; exon_id "ENSMUSE00001331044.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	CDS	7276282	7276399	.	+	2	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 7; exon_id "ENSMUSE00001331044.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	exon	7277189	7277288	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 8; exon_id "ENSMUSE00001322283.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	CDS	7277189	7277288	.	+	1	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 8; exon_id "ENSMUSE00001322283.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	exon	7279339	7279437	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 9; exon_id "ENSMUSE00001326050.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	CDS	7279339	7279437	.	+	0	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 9; exon_id "ENSMUSE00001326050.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	exon	7279796	7280017	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 10; exon_id "ENSMUSE00001327399.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	CDS	7279796	7279822	.	+	0	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 10; exon_id "ENSMUSE00001327399.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	stop_codon	7279823	7279825	.	+	0	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 10; exon_id "ENSMUSE00001327399.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	UTR	7253787	7253830	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 1; exon_id "ENSMUSE00001324778.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	UTR	7255220	7255233	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 2; exon_id "ENSMUSE00001329512.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	UTR	7279823	7280017	.	+	.	gene_id "ENSMUSG00000100939.1"; transcript_id "ENSMUST00000186194.1"; gene_type "protein_coding"; gene_name "Gm28998"; transcript_type "protein_coding"; transcript_name "Gm28998-201"; exon_number 10; exon_id "ENSMUSE00001327399.1"; level 2; protein_id "ENSMUSP00000140653.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045869.1"; havana_transcript "OTTMUST00000119868.1";
mm10-chrY	HAVANA	gene	7299029	7299475	.	+	.	gene_id "ENSMUSG00000100262.1"; gene_type "lincRNA"; gene_name "Gm28398"; level 2; havana_gene "OTTMUSG00000045870.1";
mm10-chrY	HAVANA	transcript	7299029	7299475	.	+	.	gene_id "ENSMUSG00000100262.1"; transcript_id "ENSMUST00000186587.1"; gene_type "lincRNA"; gene_name "Gm28398"; transcript_type "lincRNA"; transcript_name "Gm28398-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045870.1"; havana_transcript "OTTMUST00000119869.1";
mm10-chrY	HAVANA	exon	7299029	7299133	.	+	.	gene_id "ENSMUSG00000100262.1"; transcript_id "ENSMUST00000186587.1"; gene_type "lincRNA"; gene_name "Gm28398"; transcript_type "lincRNA"; transcript_name "Gm28398-201"; exon_number 1; exon_id "ENSMUSE00001325945.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045870.1"; havana_transcript "OTTMUST00000119869.1";
mm10-chrY	HAVANA	exon	7299415	7299475	.	+	.	gene_id "ENSMUSG00000100262.1"; transcript_id "ENSMUST00000186587.1"; gene_type "lincRNA"; gene_name "Gm28398"; transcript_type "lincRNA"; transcript_name "Gm28398-201"; exon_number 2; exon_id "ENSMUSE00001327948.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045870.1"; havana_transcript "OTTMUST00000119869.1";
mm10-chrY	HAVANA	gene	7340242	7340940	.	-	.	gene_id "ENSMUSG00000100453.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28397"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045871.1";
mm10-chrY	HAVANA	transcript	7340242	7340940	.	-	.	gene_id "ENSMUSG00000100453.1"; transcript_id "ENSMUST00000187970.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28397"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28397-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045871.1"; havana_transcript "OTTMUST00000119870.1";
mm10-chrY	HAVANA	exon	7340242	7340940	.	-	.	gene_id "ENSMUSG00000100453.1"; transcript_id "ENSMUST00000187970.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28397"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28397-201"; exon_number 1; exon_id "ENSMUSE00001324779.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045871.1"; havana_transcript "OTTMUST00000119870.1";
mm10-chrY	HAVANA	gene	7353770	7354149	.	-	.	gene_id "ENSMUSG00000100858.1"; gene_type "processed_pseudogene"; gene_name "Gm28400"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045872.1";
mm10-chrY	HAVANA	transcript	7353770	7354149	.	-	.	gene_id "ENSMUSG00000100858.1"; transcript_id "ENSMUST00000191332.1"; gene_type "processed_pseudogene"; gene_name "Gm28400"; transcript_type "processed_pseudogene"; transcript_name "Gm28400-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045872.1"; havana_transcript "OTTMUST00000119871.1";
mm10-chrY	HAVANA	exon	7353770	7354149	.	-	.	gene_id "ENSMUSG00000100858.1"; transcript_id "ENSMUST00000191332.1"; gene_type "processed_pseudogene"; gene_name "Gm28400"; transcript_type "processed_pseudogene"; transcript_name "Gm28400-201"; exon_number 1; exon_id "ENSMUSE00001327751.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045872.1"; havana_transcript "OTTMUST00000119871.1";
mm10-chrY	HAVANA	gene	7377152	7377469	.	-	.	gene_id "ENSMUSG00000099965.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28399"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045873.1";
mm10-chrY	HAVANA	transcript	7377152	7377469	.	-	.	gene_id "ENSMUSG00000099965.1"; transcript_id "ENSMUST00000186221.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28399"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28399-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045873.1"; havana_transcript "OTTMUST00000119872.1";
mm10-chrY	HAVANA	exon	7377152	7377469	.	-	.	gene_id "ENSMUSG00000099965.1"; transcript_id "ENSMUST00000186221.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28399"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28399-201"; exon_number 1; exon_id "ENSMUSE00001332390.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045873.1"; havana_transcript "OTTMUST00000119872.1";
mm10-chrY	HAVANA	gene	7378876	7382220	.	-	.	gene_id "ENSMUSG00000100948.1"; gene_type "lincRNA"; gene_name "Gm28395"; level 2; havana_gene "OTTMUSG00000045874.1";
mm10-chrY	HAVANA	transcript	7378876	7382220	.	-	.	gene_id "ENSMUSG00000100948.1"; transcript_id "ENSMUST00000187794.1"; gene_type "lincRNA"; gene_name "Gm28395"; transcript_type "lincRNA"; transcript_name "Gm28395-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045874.1"; havana_transcript "OTTMUST00000119873.1";
mm10-chrY	HAVANA	exon	7381998	7382220	.	-	.	gene_id "ENSMUSG00000100948.1"; transcript_id "ENSMUST00000187794.1"; gene_type "lincRNA"; gene_name "Gm28395"; transcript_type "lincRNA"; transcript_name "Gm28395-201"; exon_number 1; exon_id "ENSMUSE00001336002.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045874.1"; havana_transcript "OTTMUST00000119873.1";
mm10-chrY	HAVANA	exon	7378876	7380820	.	-	.	gene_id "ENSMUSG00000100948.1"; transcript_id "ENSMUST00000187794.1"; gene_type "lincRNA"; gene_name "Gm28395"; transcript_type "lincRNA"; transcript_name "Gm28395-201"; exon_number 2; exon_id "ENSMUSE00001326281.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045874.1"; havana_transcript "OTTMUST00000119873.1";
mm10-chrY	ENSEMBL	gene	7405010	7405552	.	+	.	gene_id "ENSMUSG00000095602.1"; gene_type "protein_coding"; gene_name "Gm21788"; level 3;
mm10-chrY	ENSEMBL	transcript	7405010	7405552	.	+	.	gene_id "ENSMUSG00000095602.1"; transcript_id "ENSMUST00000177878.1"; gene_type "protein_coding"; gene_name "Gm21788"; transcript_type "protein_coding"; transcript_name "Gm21788-201"; level 3; protein_id "ENSMUSP00000136752.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	7405010	7405552	.	+	.	gene_id "ENSMUSG00000095602.1"; transcript_id "ENSMUST00000177878.1"; gene_type "protein_coding"; gene_name "Gm21788"; transcript_type "protein_coding"; transcript_name "Gm21788-201"; exon_number 1; exon_id "ENSMUSE00000990651.1"; level 3; protein_id "ENSMUSP00000136752.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	7405010	7405549	.	+	0	gene_id "ENSMUSG00000095602.1"; transcript_id "ENSMUST00000177878.1"; gene_type "protein_coding"; gene_name "Gm21788"; transcript_type "protein_coding"; transcript_name "Gm21788-201"; exon_number 1; exon_id "ENSMUSE00000990651.1"; level 3; protein_id "ENSMUSP00000136752.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	7405010	7405012	.	+	0	gene_id "ENSMUSG00000095602.1"; transcript_id "ENSMUST00000177878.1"; gene_type "protein_coding"; gene_name "Gm21788"; transcript_type "protein_coding"; transcript_name "Gm21788-201"; exon_number 1; exon_id "ENSMUSE00000990651.1"; level 3; protein_id "ENSMUSP00000136752.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	7405550	7405552	.	+	0	gene_id "ENSMUSG00000095602.1"; transcript_id "ENSMUST00000177878.1"; gene_type "protein_coding"; gene_name "Gm21788"; transcript_type "protein_coding"; transcript_name "Gm21788-201"; exon_number 1; exon_id "ENSMUSE00000990651.1"; level 3; protein_id "ENSMUSP00000136752.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	7405550	7405552	.	+	.	gene_id "ENSMUSG00000095602.1"; transcript_id "ENSMUST00000177878.1"; gene_type "protein_coding"; gene_name "Gm21788"; transcript_type "protein_coding"; transcript_name "Gm21788-201"; exon_number 1; exon_id "ENSMUSE00000990651.1"; level 3; protein_id "ENSMUSP00000136752.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	7415351	7418585	.	+	.	gene_id "ENSMUSG00000100961.1"; gene_type "lincRNA"; gene_name "Gm28394"; level 2; havana_gene "OTTMUSG00000045875.1";
mm10-chrY	HAVANA	transcript	7415351	7418585	.	+	.	gene_id "ENSMUSG00000100961.1"; transcript_id "ENSMUST00000186805.1"; gene_type "lincRNA"; gene_name "Gm28394"; transcript_type "lincRNA"; transcript_name "Gm28394-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045875.1"; havana_transcript "OTTMUST00000119874.1";
mm10-chrY	HAVANA	exon	7415351	7415988	.	+	.	gene_id "ENSMUSG00000100961.1"; transcript_id "ENSMUST00000186805.1"; gene_type "lincRNA"; gene_name "Gm28394"; transcript_type "lincRNA"; transcript_name "Gm28394-201"; exon_number 1; exon_id "ENSMUSE00001329551.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045875.1"; havana_transcript "OTTMUST00000119874.1";
mm10-chrY	HAVANA	exon	7416474	7416659	.	+	.	gene_id "ENSMUSG00000100961.1"; transcript_id "ENSMUST00000186805.1"; gene_type "lincRNA"; gene_name "Gm28394"; transcript_type "lincRNA"; transcript_name "Gm28394-201"; exon_number 2; exon_id "ENSMUSE00001332389.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045875.1"; havana_transcript "OTTMUST00000119874.1";
mm10-chrY	HAVANA	exon	7417389	7417572	.	+	.	gene_id "ENSMUSG00000100961.1"; transcript_id "ENSMUST00000186805.1"; gene_type "lincRNA"; gene_name "Gm28394"; transcript_type "lincRNA"; transcript_name "Gm28394-201"; exon_number 3; exon_id "ENSMUSE00001327025.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045875.1"; havana_transcript "OTTMUST00000119874.1";
mm10-chrY	HAVANA	exon	7418099	7418585	.	+	.	gene_id "ENSMUSG00000100961.1"; transcript_id "ENSMUST00000186805.1"; gene_type "lincRNA"; gene_name "Gm28394"; transcript_type "lincRNA"; transcript_name "Gm28394-201"; exon_number 4; exon_id "ENSMUSE00001330577.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045875.1"; havana_transcript "OTTMUST00000119874.1";
mm10-chrY	HAVANA	gene	7464101	7464479	.	+	.	gene_id "ENSMUSG00000100806.1"; gene_type "processed_pseudogene"; gene_name "Gm28396"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045876.1";
mm10-chrY	HAVANA	transcript	7464101	7464479	.	+	.	gene_id "ENSMUSG00000100806.1"; transcript_id "ENSMUST00000190309.1"; gene_type "processed_pseudogene"; gene_name "Gm28396"; transcript_type "processed_pseudogene"; transcript_name "Gm28396-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045876.1"; havana_transcript "OTTMUST00000119875.1";
mm10-chrY	HAVANA	exon	7464101	7464479	.	+	.	gene_id "ENSMUSG00000100806.1"; transcript_id "ENSMUST00000190309.1"; gene_type "processed_pseudogene"; gene_name "Gm28396"; transcript_type "processed_pseudogene"; transcript_name "Gm28396-201"; exon_number 1; exon_id "ENSMUSE00001327920.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045876.1"; havana_transcript "OTTMUST00000119875.1";
mm10-chrY	HAVANA	gene	7552848	7556083	.	+	.	gene_id "ENSMUSG00000101521.1"; gene_type "lincRNA"; gene_name "Gm28393"; level 2; havana_gene "OTTMUSG00000045878.1";
mm10-chrY	HAVANA	transcript	7552848	7556083	.	+	.	gene_id "ENSMUSG00000101521.1"; transcript_id "ENSMUST00000191261.1"; gene_type "lincRNA"; gene_name "Gm28393"; transcript_type "lincRNA"; transcript_name "Gm28393-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045878.1"; havana_transcript "OTTMUST00000119877.1";
mm10-chrY	HAVANA	exon	7552848	7553486	.	+	.	gene_id "ENSMUSG00000101521.1"; transcript_id "ENSMUST00000191261.1"; gene_type "lincRNA"; gene_name "Gm28393"; transcript_type "lincRNA"; transcript_name "Gm28393-201"; exon_number 1; exon_id "ENSMUSE00001327823.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045878.1"; havana_transcript "OTTMUST00000119877.1";
mm10-chrY	HAVANA	exon	7553970	7554155	.	+	.	gene_id "ENSMUSG00000101521.1"; transcript_id "ENSMUST00000191261.1"; gene_type "lincRNA"; gene_name "Gm28393"; transcript_type "lincRNA"; transcript_name "Gm28393-201"; exon_number 2; exon_id "ENSMUSE00001321734.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045878.1"; havana_transcript "OTTMUST00000119877.1";
mm10-chrY	HAVANA	exon	7554883	7555066	.	+	.	gene_id "ENSMUSG00000101521.1"; transcript_id "ENSMUST00000191261.1"; gene_type "lincRNA"; gene_name "Gm28393"; transcript_type "lincRNA"; transcript_name "Gm28393-201"; exon_number 3; exon_id "ENSMUSE00001324335.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045878.1"; havana_transcript "OTTMUST00000119877.1";
mm10-chrY	HAVANA	exon	7555595	7556083	.	+	.	gene_id "ENSMUSG00000101521.1"; transcript_id "ENSMUST00000191261.1"; gene_type "lincRNA"; gene_name "Gm28393"; transcript_type "lincRNA"; transcript_name "Gm28393-201"; exon_number 4; exon_id "ENSMUSE00001320189.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045878.1"; havana_transcript "OTTMUST00000119877.1";
mm10-chrY	HAVANA	gene	7632774	7638489	.	-	.	gene_id "ENSMUSG00000094081.2"; gene_type "protein_coding"; gene_name "Gm20826"; level 2; havana_gene "OTTMUSG00000045879.2";
mm10-chrY	HAVANA	transcript	7632774	7638489	.	-	.	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000185348.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-202"; level 2; protein_id "ENSMUSP00000140488.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2"; havana_transcript "OTTMUST00000119878.2";
mm10-chrY	HAVANA	exon	7638366	7638489	.	-	.	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000185348.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-202"; exon_number 1; exon_id "ENSMUSE00001318779.1"; level 2; protein_id "ENSMUSP00000140488.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2"; havana_transcript "OTTMUST00000119878.2";
mm10-chrY	HAVANA	exon	7632774	7637254	.	-	.	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000185348.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-202"; exon_number 2; exon_id "ENSMUSE00001319720.1"; level 2; protein_id "ENSMUSP00000140488.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2"; havana_transcript "OTTMUST00000119878.2";
mm10-chrY	HAVANA	CDS	7636293	7636973	.	-	0	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000185348.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-202"; exon_number 2; exon_id "ENSMUSE00001319720.1"; level 2; protein_id "ENSMUSP00000140488.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2"; havana_transcript "OTTMUST00000119878.2";
mm10-chrY	HAVANA	start_codon	7636971	7636973	.	-	0	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000185348.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-202"; exon_number 2; exon_id "ENSMUSE00001319720.1"; level 2; protein_id "ENSMUSP00000140488.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2"; havana_transcript "OTTMUST00000119878.2";
mm10-chrY	HAVANA	stop_codon	7636290	7636292	.	-	0	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000185348.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-202"; exon_number 2; exon_id "ENSMUSE00001319720.1"; level 2; protein_id "ENSMUSP00000140488.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2"; havana_transcript "OTTMUST00000119878.2";
mm10-chrY	HAVANA	UTR	7638366	7638489	.	-	.	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000185348.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-202"; exon_number 1; exon_id "ENSMUSE00001318779.1"; level 2; protein_id "ENSMUSP00000140488.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2"; havana_transcript "OTTMUST00000119878.2";
mm10-chrY	HAVANA	UTR	7632774	7636292	.	-	.	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000185348.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-202"; exon_number 2; exon_id "ENSMUSE00001319720.1"; level 2; protein_id "ENSMUSP00000140488.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2"; havana_transcript "OTTMUST00000119878.2";
mm10-chrY	HAVANA	UTR	7636974	7637254	.	-	.	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000185348.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-202"; exon_number 2; exon_id "ENSMUSE00001319720.1"; level 2; protein_id "ENSMUSP00000140488.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2"; havana_transcript "OTTMUST00000119878.2";
mm10-chrY	ENSEMBL	transcript	7636216	7636973	.	-	.	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000179256.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-201"; level 3; protein_id "ENSMUSP00000137147.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2";
mm10-chrY	ENSEMBL	exon	7636216	7636973	.	-	.	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000179256.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-201"; exon_number 1; exon_id "ENSMUSE00000967002.1"; level 3; protein_id "ENSMUSP00000137147.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2";
mm10-chrY	ENSEMBL	CDS	7636293	7636973	.	-	0	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000179256.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-201"; exon_number 1; exon_id "ENSMUSE00000967002.1"; level 3; protein_id "ENSMUSP00000137147.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2";
mm10-chrY	ENSEMBL	start_codon	7636971	7636973	.	-	0	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000179256.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-201"; exon_number 1; exon_id "ENSMUSE00000967002.1"; level 3; protein_id "ENSMUSP00000137147.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2";
mm10-chrY	ENSEMBL	stop_codon	7636290	7636292	.	-	0	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000179256.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-201"; exon_number 1; exon_id "ENSMUSE00000967002.1"; level 3; protein_id "ENSMUSP00000137147.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2";
mm10-chrY	ENSEMBL	UTR	7636216	7636292	.	-	.	gene_id "ENSMUSG00000094081.2"; transcript_id "ENSMUST00000179256.1"; gene_type "protein_coding"; gene_name "Gm20826"; transcript_type "protein_coding"; transcript_name "Gm20826-201"; exon_number 1; exon_id "ENSMUSE00000967002.1"; level 3; protein_id "ENSMUSP00000137147.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85848.1"; havana_gene "OTTMUSG00000045879.2";
mm10-chrY	HAVANA	gene	7665545	7666321	.	+	.	gene_id "ENSMUSG00000101181.1"; gene_type "processed_pseudogene"; gene_name "Vmn2r-ps149"; level 2; havana_gene "OTTMUSG00000046112.1";
mm10-chrY	HAVANA	transcript	7665545	7666321	.	+	.	gene_id "ENSMUSG00000101181.1"; transcript_id "ENSMUST00000188423.1"; gene_type "processed_pseudogene"; gene_name "Vmn2r-ps149"; transcript_type "processed_pseudogene"; transcript_name "Vmn2r-ps149-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000046112.1"; havana_transcript "OTTMUST00000120374.1";
mm10-chrY	HAVANA	exon	7665545	7665649	.	+	.	gene_id "ENSMUSG00000101181.1"; transcript_id "ENSMUST00000188423.1"; gene_type "processed_pseudogene"; gene_name "Vmn2r-ps149"; transcript_type "processed_pseudogene"; transcript_name "Vmn2r-ps149-201"; exon_number 1; exon_id "ENSMUSE00001333351.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000046112.1"; havana_transcript "OTTMUST00000120374.1";
mm10-chrY	HAVANA	exon	7665837	7666321	.	+	.	gene_id "ENSMUSG00000101181.1"; transcript_id "ENSMUST00000188423.1"; gene_type "processed_pseudogene"; gene_name "Vmn2r-ps149"; transcript_type "processed_pseudogene"; transcript_name "Vmn2r-ps149-201"; exon_number 2; exon_id "ENSMUSE00001333757.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000046112.1"; havana_transcript "OTTMUST00000120374.1";
mm10-chrY	HAVANA	gene	7722941	7749195	.	+	.	gene_id "ENSMUSG00000100645.1"; gene_type "protein_coding"; gene_name "Gm28576"; level 2; havana_gene "OTTMUSG00000046113.1";
mm10-chrY	HAVANA	transcript	7722941	7749195	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	exon	7722941	7722984	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 1; exon_id "ENSMUSE00001330493.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	exon	7724375	7724506	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 2; exon_id "ENSMUSE00001326914.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	CDS	7724389	7724506	.	+	0	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 2; exon_id "ENSMUSE00001326914.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	start_codon	7724389	7724391	.	+	0	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 2; exon_id "ENSMUSE00001326914.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	exon	7729829	7729895	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 3; exon_id "ENSMUSE00001330963.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	CDS	7729829	7729895	.	+	2	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 3; exon_id "ENSMUSE00001330963.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	exon	7730489	7730523	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 4; exon_id "ENSMUSE00001325200.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	CDS	7730489	7730523	.	+	1	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 4; exon_id "ENSMUSE00001325200.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	exon	7737579	7737645	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 5; exon_id "ENSMUSE00001336042.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	CDS	7737579	7737645	.	+	2	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 5; exon_id "ENSMUSE00001336042.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	exon	7738223	7738257	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 6; exon_id "ENSMUSE00001330709.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	CDS	7738223	7738257	.	+	1	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 6; exon_id "ENSMUSE00001330709.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	exon	7745458	7745575	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 7; exon_id "ENSMUSE00001320870.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	CDS	7745458	7745575	.	+	2	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 7; exon_id "ENSMUSE00001320870.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	exon	7746367	7746466	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 8; exon_id "ENSMUSE00001319658.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	CDS	7746367	7746466	.	+	1	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 8; exon_id "ENSMUSE00001319658.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	exon	7748517	7748615	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 9; exon_id "ENSMUSE00001318967.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	CDS	7748517	7748615	.	+	0	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 9; exon_id "ENSMUSE00001318967.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	exon	7748974	7749195	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 10; exon_id "ENSMUSE00001327196.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	CDS	7748974	7749000	.	+	0	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 10; exon_id "ENSMUSE00001327196.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	stop_codon	7749001	7749003	.	+	0	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 10; exon_id "ENSMUSE00001327196.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	UTR	7722941	7722984	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 1; exon_id "ENSMUSE00001330493.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	UTR	7724375	7724388	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 2; exon_id "ENSMUSE00001326914.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	UTR	7749001	7749195	.	+	.	gene_id "ENSMUSG00000100645.1"; transcript_id "ENSMUST00000189007.1"; gene_type "protein_coding"; gene_name "Gm28576"; transcript_type "protein_coding"; transcript_name "Gm28576-201"; exon_number 10; exon_id "ENSMUSE00001327196.1"; level 2; protein_id "ENSMUSP00000140720.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046113.1"; havana_transcript "OTTMUST00000120375.1";
mm10-chrY	HAVANA	gene	7768203	7768649	.	+	.	gene_id "ENSMUSG00000100124.1"; gene_type "lincRNA"; gene_name "Gm28575"; level 2; havana_gene "OTTMUSG00000046114.1";
mm10-chrY	HAVANA	transcript	7768203	7768649	.	+	.	gene_id "ENSMUSG00000100124.1"; transcript_id "ENSMUST00000188234.1"; gene_type "lincRNA"; gene_name "Gm28575"; transcript_type "lincRNA"; transcript_name "Gm28575-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046114.1"; havana_transcript "OTTMUST00000120376.1";
mm10-chrY	HAVANA	exon	7768203	7768307	.	+	.	gene_id "ENSMUSG00000100124.1"; transcript_id "ENSMUST00000188234.1"; gene_type "lincRNA"; gene_name "Gm28575"; transcript_type "lincRNA"; transcript_name "Gm28575-201"; exon_number 1; exon_id "ENSMUSE00001334351.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046114.1"; havana_transcript "OTTMUST00000120376.1";
mm10-chrY	HAVANA	exon	7768589	7768649	.	+	.	gene_id "ENSMUSG00000100124.1"; transcript_id "ENSMUST00000188234.1"; gene_type "lincRNA"; gene_name "Gm28575"; transcript_type "lincRNA"; transcript_name "Gm28575-201"; exon_number 2; exon_id "ENSMUSE00001321740.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046114.1"; havana_transcript "OTTMUST00000120376.1";
mm10-chrY	HAVANA	gene	7809403	7810101	.	-	.	gene_id "ENSMUSG00000101956.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28574"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046115.1";
mm10-chrY	HAVANA	transcript	7809403	7810101	.	-	.	gene_id "ENSMUSG00000101956.1"; transcript_id "ENSMUST00000185757.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28574"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28574-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046115.1"; havana_transcript "OTTMUST00000120377.1";
mm10-chrY	HAVANA	exon	7809403	7810101	.	-	.	gene_id "ENSMUSG00000101956.1"; transcript_id "ENSMUST00000185757.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28574"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28574-201"; exon_number 1; exon_id "ENSMUSE00001330604.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046115.1"; havana_transcript "OTTMUST00000120377.1";
mm10-chrY	HAVANA	gene	7822919	7823298	.	-	.	gene_id "ENSMUSG00000101351.1"; gene_type "processed_pseudogene"; gene_name "Gm28573"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046116.1";
mm10-chrY	HAVANA	transcript	7822919	7823298	.	-	.	gene_id "ENSMUSG00000101351.1"; transcript_id "ENSMUST00000187821.1"; gene_type "processed_pseudogene"; gene_name "Gm28573"; transcript_type "processed_pseudogene"; transcript_name "Gm28573-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046116.1"; havana_transcript "OTTMUST00000120378.1";
mm10-chrY	HAVANA	exon	7822919	7823298	.	-	.	gene_id "ENSMUSG00000101351.1"; transcript_id "ENSMUST00000187821.1"; gene_type "processed_pseudogene"; gene_name "Gm28573"; transcript_type "processed_pseudogene"; transcript_name "Gm28573-201"; exon_number 1; exon_id "ENSMUSE00001331872.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046116.1"; havana_transcript "OTTMUST00000120378.1";
mm10-chrY	HAVANA	gene	7846294	7846611	.	-	.	gene_id "ENSMUSG00000100412.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28572"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046117.1";
mm10-chrY	HAVANA	transcript	7846294	7846611	.	-	.	gene_id "ENSMUSG00000100412.1"; transcript_id "ENSMUST00000187444.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28572"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28572-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046117.1"; havana_transcript "OTTMUST00000120379.1";
mm10-chrY	HAVANA	exon	7846294	7846611	.	-	.	gene_id "ENSMUSG00000100412.1"; transcript_id "ENSMUST00000187444.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28572"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28572-201"; exon_number 1; exon_id "ENSMUSE00001322110.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046117.1"; havana_transcript "OTTMUST00000120379.1";
mm10-chrY	HAVANA	gene	7848018	7851362	.	-	.	gene_id "ENSMUSG00000102026.1"; gene_type "lincRNA"; gene_name "Gm28571"; level 2; havana_gene "OTTMUSG00000046118.1";
mm10-chrY	HAVANA	transcript	7848018	7851362	.	-	.	gene_id "ENSMUSG00000102026.1"; transcript_id "ENSMUST00000188922.1"; gene_type "lincRNA"; gene_name "Gm28571"; transcript_type "lincRNA"; transcript_name "Gm28571-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046118.1"; havana_transcript "OTTMUST00000120380.1";
mm10-chrY	HAVANA	exon	7851140	7851362	.	-	.	gene_id "ENSMUSG00000102026.1"; transcript_id "ENSMUST00000188922.1"; gene_type "lincRNA"; gene_name "Gm28571"; transcript_type "lincRNA"; transcript_name "Gm28571-201"; exon_number 1; exon_id "ENSMUSE00001329736.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046118.1"; havana_transcript "OTTMUST00000120380.1";
mm10-chrY	HAVANA	exon	7848018	7849962	.	-	.	gene_id "ENSMUSG00000102026.1"; transcript_id "ENSMUST00000188922.1"; gene_type "lincRNA"; gene_name "Gm28571"; transcript_type "lincRNA"; transcript_name "Gm28571-201"; exon_number 2; exon_id "ENSMUSE00001319362.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046118.1"; havana_transcript "OTTMUST00000120380.1";
mm10-chrY	HAVANA	gene	7884460	7887694	.	+	.	gene_id "ENSMUSG00000099800.1"; gene_type "lincRNA"; gene_name "Gm28570"; level 2; havana_gene "OTTMUSG00000046119.1";
mm10-chrY	HAVANA	transcript	7884460	7887694	.	+	.	gene_id "ENSMUSG00000099800.1"; transcript_id "ENSMUST00000188300.1"; gene_type "lincRNA"; gene_name "Gm28570"; transcript_type "lincRNA"; transcript_name "Gm28570-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046119.1"; havana_transcript "OTTMUST00000120381.1";
mm10-chrY	HAVANA	exon	7884460	7885097	.	+	.	gene_id "ENSMUSG00000099800.1"; transcript_id "ENSMUST00000188300.1"; gene_type "lincRNA"; gene_name "Gm28570"; transcript_type "lincRNA"; transcript_name "Gm28570-201"; exon_number 1; exon_id "ENSMUSE00001326091.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046119.1"; havana_transcript "OTTMUST00000120381.1";
mm10-chrY	HAVANA	exon	7885583	7885768	.	+	.	gene_id "ENSMUSG00000099800.1"; transcript_id "ENSMUST00000188300.1"; gene_type "lincRNA"; gene_name "Gm28570"; transcript_type "lincRNA"; transcript_name "Gm28570-201"; exon_number 2; exon_id "ENSMUSE00001336099.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046119.1"; havana_transcript "OTTMUST00000120381.1";
mm10-chrY	HAVANA	exon	7886498	7886681	.	+	.	gene_id "ENSMUSG00000099800.1"; transcript_id "ENSMUST00000188300.1"; gene_type "lincRNA"; gene_name "Gm28570"; transcript_type "lincRNA"; transcript_name "Gm28570-201"; exon_number 3; exon_id "ENSMUSE00001327370.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046119.1"; havana_transcript "OTTMUST00000120381.1";
mm10-chrY	HAVANA	exon	7887208	7887694	.	+	.	gene_id "ENSMUSG00000099800.1"; transcript_id "ENSMUST00000188300.1"; gene_type "lincRNA"; gene_name "Gm28570"; transcript_type "lincRNA"; transcript_name "Gm28570-201"; exon_number 4; exon_id "ENSMUSE00001334417.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046119.1"; havana_transcript "OTTMUST00000120381.1";
mm10-chrY	HAVANA	gene	7994833	7997168	.	-	.	gene_id "ENSMUSG00000099861.1"; gene_type "protein_coding"; gene_name "Gm29049"; level 1; havana_gene "OTTMUSG00000046120.2";
mm10-chrY	HAVANA	transcript	7994833	7997168	.	-	.	gene_id "ENSMUSG00000099861.1"; transcript_id "ENSMUST00000185705.1"; gene_type "protein_coding"; gene_name "Gm29049"; transcript_type "protein_coding"; transcript_name "Gm29049-201"; level 1; protein_id "ENSMUSP00000141109.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046120.2"; havana_transcript "OTTMUST00000120382.2";
mm10-chrY	HAVANA	exon	7997045	7997168	.	-	.	gene_id "ENSMUSG00000099861.1"; transcript_id "ENSMUST00000185705.1"; gene_type "protein_coding"; gene_name "Gm29049"; transcript_type "protein_coding"; transcript_name "Gm29049-201"; exon_number 1; exon_id "ENSMUSE00001334281.1"; level 1; protein_id "ENSMUSP00000141109.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046120.2"; havana_transcript "OTTMUST00000120382.2";
mm10-chrY	HAVANA	exon	7994833	7995932	.	-	.	gene_id "ENSMUSG00000099861.1"; transcript_id "ENSMUST00000185705.1"; gene_type "protein_coding"; gene_name "Gm29049"; transcript_type "protein_coding"; transcript_name "Gm29049-201"; exon_number 2; exon_id "ENSMUSE00001332195.1"; level 1; protein_id "ENSMUSP00000141109.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046120.2"; havana_transcript "OTTMUST00000120382.2";
mm10-chrY	HAVANA	CDS	7994970	7995650	.	-	0	gene_id "ENSMUSG00000099861.1"; transcript_id "ENSMUST00000185705.1"; gene_type "protein_coding"; gene_name "Gm29049"; transcript_type "protein_coding"; transcript_name "Gm29049-201"; exon_number 2; exon_id "ENSMUSE00001332195.1"; level 1; protein_id "ENSMUSP00000141109.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046120.2"; havana_transcript "OTTMUST00000120382.2";
mm10-chrY	HAVANA	start_codon	7995648	7995650	.	-	0	gene_id "ENSMUSG00000099861.1"; transcript_id "ENSMUST00000185705.1"; gene_type "protein_coding"; gene_name "Gm29049"; transcript_type "protein_coding"; transcript_name "Gm29049-201"; exon_number 2; exon_id "ENSMUSE00001332195.1"; level 1; protein_id "ENSMUSP00000141109.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046120.2"; havana_transcript "OTTMUST00000120382.2";
mm10-chrY	HAVANA	stop_codon	7994967	7994969	.	-	0	gene_id "ENSMUSG00000099861.1"; transcript_id "ENSMUST00000185705.1"; gene_type "protein_coding"; gene_name "Gm29049"; transcript_type "protein_coding"; transcript_name "Gm29049-201"; exon_number 2; exon_id "ENSMUSE00001332195.1"; level 1; protein_id "ENSMUSP00000141109.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046120.2"; havana_transcript "OTTMUST00000120382.2";
mm10-chrY	HAVANA	UTR	7997045	7997168	.	-	.	gene_id "ENSMUSG00000099861.1"; transcript_id "ENSMUST00000185705.1"; gene_type "protein_coding"; gene_name "Gm29049"; transcript_type "protein_coding"; transcript_name "Gm29049-201"; exon_number 1; exon_id "ENSMUSE00001334281.1"; level 1; protein_id "ENSMUSP00000141109.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046120.2"; havana_transcript "OTTMUST00000120382.2";
mm10-chrY	HAVANA	UTR	7994833	7994969	.	-	.	gene_id "ENSMUSG00000099861.1"; transcript_id "ENSMUST00000185705.1"; gene_type "protein_coding"; gene_name "Gm29049"; transcript_type "protein_coding"; transcript_name "Gm29049-201"; exon_number 2; exon_id "ENSMUSE00001332195.1"; level 1; protein_id "ENSMUSP00000141109.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046120.2"; havana_transcript "OTTMUST00000120382.2";
mm10-chrY	HAVANA	UTR	7995651	7995932	.	-	.	gene_id "ENSMUSG00000099861.1"; transcript_id "ENSMUST00000185705.1"; gene_type "protein_coding"; gene_name "Gm29049"; transcript_type "protein_coding"; transcript_name "Gm29049-201"; exon_number 2; exon_id "ENSMUSE00001332195.1"; level 1; protein_id "ENSMUSP00000141109.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046120.2"; havana_transcript "OTTMUST00000120382.2";
mm10-chrY	HAVANA	gene	8069168	8071507	.	-	.	gene_id "ENSMUSG00000095324.2"; gene_type "protein_coding"; gene_name "Gm20825"; level 2; havana_gene "OTTMUSG00000046121.2";
mm10-chrY	HAVANA	transcript	8069168	8071507	.	-	.	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178149.2"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-201"; level 2; protein_id "ENSMUSP00000136231.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2"; havana_transcript "OTTMUST00000120383.2";
mm10-chrY	HAVANA	exon	8071389	8071507	.	-	.	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178149.2"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-201"; exon_number 1; exon_id "ENSMUSE00000972209.2"; level 2; protein_id "ENSMUSP00000136231.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2"; havana_transcript "OTTMUST00000120383.2";
mm10-chrY	HAVANA	exon	8069168	8070274	.	-	.	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178149.2"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-201"; exon_number 2; exon_id "ENSMUSE00001008195.2"; level 2; protein_id "ENSMUSP00000136231.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2"; havana_transcript "OTTMUST00000120383.2";
mm10-chrY	HAVANA	CDS	8069313	8069993	.	-	0	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178149.2"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-201"; exon_number 2; exon_id "ENSMUSE00001008195.2"; level 2; protein_id "ENSMUSP00000136231.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2"; havana_transcript "OTTMUST00000120383.2";
mm10-chrY	HAVANA	start_codon	8069991	8069993	.	-	0	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178149.2"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-201"; exon_number 2; exon_id "ENSMUSE00001008195.2"; level 2; protein_id "ENSMUSP00000136231.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2"; havana_transcript "OTTMUST00000120383.2";
mm10-chrY	HAVANA	stop_codon	8069310	8069312	.	-	0	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178149.2"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-201"; exon_number 2; exon_id "ENSMUSE00001008195.2"; level 2; protein_id "ENSMUSP00000136231.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2"; havana_transcript "OTTMUST00000120383.2";
mm10-chrY	HAVANA	UTR	8071389	8071507	.	-	.	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178149.2"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-201"; exon_number 1; exon_id "ENSMUSE00000972209.2"; level 2; protein_id "ENSMUSP00000136231.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2"; havana_transcript "OTTMUST00000120383.2";
mm10-chrY	HAVANA	UTR	8069168	8069312	.	-	.	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178149.2"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-201"; exon_number 2; exon_id "ENSMUSE00001008195.2"; level 2; protein_id "ENSMUSP00000136231.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2"; havana_transcript "OTTMUST00000120383.2";
mm10-chrY	HAVANA	UTR	8069994	8070274	.	-	.	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178149.2"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-201"; exon_number 2; exon_id "ENSMUSE00001008195.2"; level 2; protein_id "ENSMUSP00000136231.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2"; havana_transcript "OTTMUST00000120383.2";
mm10-chrY	ENSEMBL	transcript	8069310	8069993	.	-	.	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178396.1"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-202"; level 3; protein_id "ENSMUSP00000136143.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2";
mm10-chrY	ENSEMBL	exon	8069310	8069993	.	-	.	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178396.1"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-202"; exon_number 1; exon_id "ENSMUSE00001046867.1"; level 3; protein_id "ENSMUSP00000136143.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2";
mm10-chrY	ENSEMBL	CDS	8069313	8069993	.	-	0	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178396.1"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-202"; exon_number 1; exon_id "ENSMUSE00001046867.1"; level 3; protein_id "ENSMUSP00000136143.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2";
mm10-chrY	ENSEMBL	start_codon	8069991	8069993	.	-	0	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178396.1"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-202"; exon_number 1; exon_id "ENSMUSE00001046867.1"; level 3; protein_id "ENSMUSP00000136143.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2";
mm10-chrY	ENSEMBL	stop_codon	8069310	8069312	.	-	0	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178396.1"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-202"; exon_number 1; exon_id "ENSMUSE00001046867.1"; level 3; protein_id "ENSMUSP00000136143.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2";
mm10-chrY	ENSEMBL	UTR	8069310	8069312	.	-	.	gene_id "ENSMUSG00000095324.2"; transcript_id "ENSMUST00000178396.1"; gene_type "protein_coding"; gene_name "Gm20825"; transcript_type "protein_coding"; transcript_name "Gm20825-202"; exon_number 1; exon_id "ENSMUSE00001046867.1"; level 3; protein_id "ENSMUSP00000136143.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046121.2";
mm10-chrY	HAVANA	gene	8087690	8087797	.	+	.	gene_id "ENSMUSG00000101616.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29047"; level 2; havana_gene "OTTMUSG00000046122.1";
mm10-chrY	HAVANA	transcript	8087690	8087797	.	+	.	gene_id "ENSMUSG00000101616.1"; transcript_id "ENSMUST00000189816.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29047-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046122.1"; havana_transcript "OTTMUST00000120384.1";
mm10-chrY	HAVANA	exon	8087690	8087797	.	+	.	gene_id "ENSMUSG00000101616.1"; transcript_id "ENSMUST00000189816.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29047-201"; exon_number 1; exon_id "ENSMUSE00001325196.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046122.1"; havana_transcript "OTTMUST00000120384.1";
mm10-chrY	HAVANA	gene	8092144	8102756	.	-	.	gene_id "ENSMUSG00000100312.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29048"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046123.1";
mm10-chrY	HAVANA	transcript	8092144	8102756	.	-	.	gene_id "ENSMUSG00000100312.1"; transcript_id "ENSMUST00000190399.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29048"; transcript_type "processed_transcript"; transcript_name "Gm29048-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046123.1"; havana_transcript "OTTMUST00000120385.1";
mm10-chrY	HAVANA	exon	8102621	8102756	.	-	.	gene_id "ENSMUSG00000100312.1"; transcript_id "ENSMUST00000190399.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29048"; transcript_type "processed_transcript"; transcript_name "Gm29048-202"; exon_number 1; exon_id "ENSMUSE00001328142.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046123.1"; havana_transcript "OTTMUST00000120385.1";
mm10-chrY	HAVANA	exon	8100630	8100760	.	-	.	gene_id "ENSMUSG00000100312.1"; transcript_id "ENSMUST00000190399.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29048"; transcript_type "processed_transcript"; transcript_name "Gm29048-202"; exon_number 2; exon_id "ENSMUSE00001334744.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046123.1"; havana_transcript "OTTMUST00000120385.1";
mm10-chrY	HAVANA	exon	8099928	8100145	.	-	.	gene_id "ENSMUSG00000100312.1"; transcript_id "ENSMUST00000190399.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29048"; transcript_type "processed_transcript"; transcript_name "Gm29048-202"; exon_number 3; exon_id "ENSMUSE00001327545.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046123.1"; havana_transcript "OTTMUST00000120385.1";
mm10-chrY	HAVANA	exon	8099049	8099232	.	-	.	gene_id "ENSMUSG00000100312.1"; transcript_id "ENSMUST00000190399.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29048"; transcript_type "processed_transcript"; transcript_name "Gm29048-202"; exon_number 4; exon_id "ENSMUSE00001334539.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046123.1"; havana_transcript "OTTMUST00000120385.1";
mm10-chrY	HAVANA	exon	8093236	8093369	.	-	.	gene_id "ENSMUSG00000100312.1"; transcript_id "ENSMUST00000190399.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29048"; transcript_type "processed_transcript"; transcript_name "Gm29048-202"; exon_number 5; exon_id "ENSMUSE00001321408.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046123.1"; havana_transcript "OTTMUST00000120385.1";
mm10-chrY	HAVANA	exon	8092144	8092941	.	-	.	gene_id "ENSMUSG00000100312.1"; transcript_id "ENSMUST00000190399.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29048"; transcript_type "processed_transcript"; transcript_name "Gm29048-202"; exon_number 6; exon_id "ENSMUSE00001325029.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046123.1"; havana_transcript "OTTMUST00000120385.1";
mm10-chrY	HAVANA	transcript	8100550	8101164	.	-	.	gene_id "ENSMUSG00000100312.1"; transcript_id "ENSMUST00000185342.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29048"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29048-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046123.1"; havana_transcript "OTTMUST00000120386.1";
mm10-chrY	HAVANA	exon	8100550	8101164	.	-	.	gene_id "ENSMUSG00000100312.1"; transcript_id "ENSMUST00000185342.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29048"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29048-201"; exon_number 1; exon_id "ENSMUSE00001330955.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046123.1"; havana_transcript "OTTMUST00000120386.1";
mm10-chrY	HAVANA	gene	8137439	8138136	.	-	.	gene_id "ENSMUSG00000100258.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29045"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046124.2";
mm10-chrY	HAVANA	transcript	8137439	8138136	.	-	.	gene_id "ENSMUSG00000100258.1"; transcript_id "ENSMUST00000187278.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29045"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29045-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046124.2"; havana_transcript "OTTMUST00000120387.2";
mm10-chrY	HAVANA	exon	8137439	8138136	.	-	.	gene_id "ENSMUSG00000100258.1"; transcript_id "ENSMUST00000187278.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29045"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29045-201"; exon_number 1; exon_id "ENSMUSE00001331843.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046124.2"; havana_transcript "OTTMUST00000120387.2";
mm10-chrY	HAVANA	gene	8144038	8147387	.	-	.	gene_id "ENSMUSG00000101229.1"; gene_type "lincRNA"; gene_name "Gm29046"; level 2; havana_gene "OTTMUSG00000046125.1";
mm10-chrY	HAVANA	transcript	8144038	8147387	.	-	.	gene_id "ENSMUSG00000101229.1"; transcript_id "ENSMUST00000188653.1"; gene_type "lincRNA"; gene_name "Gm29046"; transcript_type "lincRNA"; transcript_name "Gm29046-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046125.1"; havana_transcript "OTTMUST00000120388.1";
mm10-chrY	HAVANA	exon	8147165	8147387	.	-	.	gene_id "ENSMUSG00000101229.1"; transcript_id "ENSMUST00000188653.1"; gene_type "lincRNA"; gene_name "Gm29046"; transcript_type "lincRNA"; transcript_name "Gm29046-201"; exon_number 1; exon_id "ENSMUSE00001335205.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046125.1"; havana_transcript "OTTMUST00000120388.1";
mm10-chrY	HAVANA	exon	8144038	8145981	.	-	.	gene_id "ENSMUSG00000101229.1"; transcript_id "ENSMUST00000188653.1"; gene_type "lincRNA"; gene_name "Gm29046"; transcript_type "lincRNA"; transcript_name "Gm29046-201"; exon_number 2; exon_id "ENSMUSE00001331381.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046125.1"; havana_transcript "OTTMUST00000120388.1";
mm10-chrY	HAVANA	gene	8196252	8198619	.	+	.	gene_id "ENSMUSG00000101456.1"; gene_type "lincRNA"; gene_name "Gm29043"; level 2; havana_gene "OTTMUSG00000046126.1";
mm10-chrY	HAVANA	transcript	8196252	8198619	.	+	.	gene_id "ENSMUSG00000101456.1"; transcript_id "ENSMUST00000186371.1"; gene_type "lincRNA"; gene_name "Gm29043"; transcript_type "lincRNA"; transcript_name "Gm29043-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046126.1"; havana_transcript "OTTMUST00000120389.1";
mm10-chrY	HAVANA	exon	8196252	8196439	.	+	.	gene_id "ENSMUSG00000101456.1"; transcript_id "ENSMUST00000186371.1"; gene_type "lincRNA"; gene_name "Gm29043"; transcript_type "lincRNA"; transcript_name "Gm29043-201"; exon_number 1; exon_id "ENSMUSE00001323646.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046126.1"; havana_transcript "OTTMUST00000120389.1";
mm10-chrY	HAVANA	exon	8196929	8197110	.	+	.	gene_id "ENSMUSG00000101456.1"; transcript_id "ENSMUST00000186371.1"; gene_type "lincRNA"; gene_name "Gm29043"; transcript_type "lincRNA"; transcript_name "Gm29043-201"; exon_number 2; exon_id "ENSMUSE00001320615.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046126.1"; havana_transcript "OTTMUST00000120389.1";
mm10-chrY	HAVANA	exon	8197841	8198024	.	+	.	gene_id "ENSMUSG00000101456.1"; transcript_id "ENSMUST00000186371.1"; gene_type "lincRNA"; gene_name "Gm29043"; transcript_type "lincRNA"; transcript_name "Gm29043-201"; exon_number 3; exon_id "ENSMUSE00001332323.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046126.1"; havana_transcript "OTTMUST00000120389.1";
mm10-chrY	HAVANA	exon	8198551	8198619	.	+	.	gene_id "ENSMUSG00000101456.1"; transcript_id "ENSMUST00000186371.1"; gene_type "lincRNA"; gene_name "Gm29043"; transcript_type "lincRNA"; transcript_name "Gm29043-201"; exon_number 4; exon_id "ENSMUSE00001335974.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046126.1"; havana_transcript "OTTMUST00000120389.1";
mm10-chrY	HAVANA	gene	8247646	8257801	.	-	.	gene_id "ENSMUSG00000100421.1"; gene_type "lincRNA"; gene_name "Gm29044"; level 2; tag "overlapping_locus"; havana_gene "OTTMUSG00000046127.1";
mm10-chrY	HAVANA	transcript	8247646	8257801	.	-	.	gene_id "ENSMUSG00000100421.1"; transcript_id "ENSMUST00000188980.1"; gene_type "lincRNA"; gene_name "Gm29044"; transcript_type "lincRNA"; transcript_name "Gm29044-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046127.1"; havana_transcript "OTTMUST00000120390.1";
mm10-chrY	HAVANA	exon	8257702	8257801	.	-	.	gene_id "ENSMUSG00000100421.1"; transcript_id "ENSMUST00000188980.1"; gene_type "lincRNA"; gene_name "Gm29044"; transcript_type "lincRNA"; transcript_name "Gm29044-202"; exon_number 1; exon_id "ENSMUSE00001320225.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046127.1"; havana_transcript "OTTMUST00000120390.1";
mm10-chrY	HAVANA	exon	8247646	8247845	.	-	.	gene_id "ENSMUSG00000100421.1"; transcript_id "ENSMUST00000188980.1"; gene_type "lincRNA"; gene_name "Gm29044"; transcript_type "lincRNA"; transcript_name "Gm29044-202"; exon_number 2; exon_id "ENSMUSE00001335157.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046127.1"; havana_transcript "OTTMUST00000120390.1";
mm10-chrY	HAVANA	transcript	8255603	8257796	.	-	.	gene_id "ENSMUSG00000100421.1"; transcript_id "ENSMUST00000188916.1"; gene_type "lincRNA"; gene_name "Gm29044"; transcript_type "lincRNA"; transcript_name "Gm29044-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046127.1"; havana_transcript "OTTMUST00000120391.1";
mm10-chrY	HAVANA	exon	8257702	8257796	.	-	.	gene_id "ENSMUSG00000100421.1"; transcript_id "ENSMUST00000188916.1"; gene_type "lincRNA"; gene_name "Gm29044"; transcript_type "lincRNA"; transcript_name "Gm29044-201"; exon_number 1; exon_id "ENSMUSE00001331089.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046127.1"; havana_transcript "OTTMUST00000120391.1";
mm10-chrY	HAVANA	exon	8255603	8255790	.	-	.	gene_id "ENSMUSG00000100421.1"; transcript_id "ENSMUST00000188916.1"; gene_type "lincRNA"; gene_name "Gm29044"; transcript_type "lincRNA"; transcript_name "Gm29044-201"; exon_number 2; exon_id "ENSMUSE00001331580.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046127.1"; havana_transcript "OTTMUST00000120391.1";
mm10-chrY	HAVANA	gene	8251026	8254057	.	-	.	gene_id "ENSMUSG00000103618.1"; gene_type "TEC"; gene_name "Gm37951"; level 2; tag "overlapping_locus"; havana_gene "OTTMUSG00000046128.1";
mm10-chrY	HAVANA	transcript	8251026	8254057	.	-	.	gene_id "ENSMUSG00000103618.1"; transcript_id "ENSMUST00000192963.1"; gene_type "TEC"; gene_name "Gm37951"; transcript_type "TEC"; transcript_name "Gm37951-201"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046128.1"; havana_transcript "OTTMUST00000120392.1";
mm10-chrY	HAVANA	exon	8251026	8254057	.	-	.	gene_id "ENSMUSG00000103618.1"; transcript_id "ENSMUST00000192963.1"; gene_type "TEC"; gene_name "Gm37951"; transcript_type "TEC"; transcript_name "Gm37951-201"; exon_number 1; exon_id "ENSMUSE00001340002.1"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046128.1"; havana_transcript "OTTMUST00000120392.1";
mm10-chrY	HAVANA	gene	8257907	8284105	.	+	.	gene_id "ENSMUSG00000101928.1"; gene_type "protein_coding"; gene_name "Gm20824"; level 2; havana_gene "OTTMUSG00000046129.1";
mm10-chrY	HAVANA	transcript	8257907	8284105	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	exon	8257907	8257950	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 1; exon_id "ENSMUSE00001329518.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	exon	8259316	8259447	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 2; exon_id "ENSMUSE00001331170.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	CDS	8259330	8259447	.	+	0	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 2; exon_id "ENSMUSE00001331170.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	start_codon	8259330	8259332	.	+	0	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 2; exon_id "ENSMUSE00001331170.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	exon	8264787	8264853	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 3; exon_id "ENSMUSE00001318525.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	CDS	8264787	8264853	.	+	2	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 3; exon_id "ENSMUSE00001318525.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	exon	8265488	8265522	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 4; exon_id "ENSMUSE00001327477.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	CDS	8265488	8265522	.	+	1	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 4; exon_id "ENSMUSE00001327477.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	exon	8272545	8272611	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 5; exon_id "ENSMUSE00001320216.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	CDS	8272545	8272611	.	+	2	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 5; exon_id "ENSMUSE00001320216.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	exon	8273193	8273227	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 6; exon_id "ENSMUSE00001332956.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	CDS	8273193	8273227	.	+	1	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 6; exon_id "ENSMUSE00001332956.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	exon	8280408	8280525	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 7; exon_id "ENSMUSE00001320929.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	CDS	8280408	8280525	.	+	2	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 7; exon_id "ENSMUSE00001320929.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	exon	8281293	8281392	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 8; exon_id "ENSMUSE00001318128.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	CDS	8281293	8281392	.	+	1	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 8; exon_id "ENSMUSE00001318128.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	exon	8283426	8283524	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 9; exon_id "ENSMUSE00001326045.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	CDS	8283426	8283524	.	+	0	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 9; exon_id "ENSMUSE00001326045.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	exon	8283884	8284105	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 10; exon_id "ENSMUSE00001326666.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	CDS	8283884	8283910	.	+	0	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 10; exon_id "ENSMUSE00001326666.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	stop_codon	8283911	8283913	.	+	0	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 10; exon_id "ENSMUSE00001326666.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	UTR	8257907	8257950	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 1; exon_id "ENSMUSE00001329518.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	UTR	8259316	8259329	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 2; exon_id "ENSMUSE00001331170.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	UTR	8283911	8284105	.	+	.	gene_id "ENSMUSG00000101928.1"; transcript_id "ENSMUST00000186739.1"; gene_type "protein_coding"; gene_name "Gm20824"; transcript_type "protein_coding"; transcript_name "Gm20824-201"; exon_number 10; exon_id "ENSMUSE00001326666.1"; level 2; protein_id "ENSMUSP00000140952.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046129.1"; havana_transcript "OTTMUST00000120393.1";
mm10-chrY	HAVANA	gene	8344310	8345010	.	-	.	gene_id "ENSMUSG00000100239.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28146"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046130.1";
mm10-chrY	HAVANA	transcript	8344310	8345010	.	-	.	gene_id "ENSMUSG00000100239.1"; transcript_id "ENSMUST00000185517.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28146"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28146-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046130.1"; havana_transcript "OTTMUST00000120394.1";
mm10-chrY	HAVANA	exon	8344310	8345010	.	-	.	gene_id "ENSMUSG00000100239.1"; transcript_id "ENSMUST00000185517.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28146"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28146-201"; exon_number 1; exon_id "ENSMUSE00001320954.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046130.1"; havana_transcript "OTTMUST00000120394.1";
mm10-chrY	HAVANA	gene	8357996	8358375	.	-	.	gene_id "ENSMUSG00000100460.1"; gene_type "processed_pseudogene"; gene_name "Gm28145"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046131.1";
mm10-chrY	HAVANA	transcript	8357996	8358375	.	-	.	gene_id "ENSMUSG00000100460.1"; transcript_id "ENSMUST00000189742.1"; gene_type "processed_pseudogene"; gene_name "Gm28145"; transcript_type "processed_pseudogene"; transcript_name "Gm28145-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046131.1"; havana_transcript "OTTMUST00000120395.1";
mm10-chrY	HAVANA	exon	8357996	8358375	.	-	.	gene_id "ENSMUSG00000100460.1"; transcript_id "ENSMUST00000189742.1"; gene_type "processed_pseudogene"; gene_name "Gm28145"; transcript_type "processed_pseudogene"; transcript_name "Gm28145-201"; exon_number 1; exon_id "ENSMUSE00001325678.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046131.1"; havana_transcript "OTTMUST00000120395.1";
mm10-chrY	HAVANA	gene	8381405	8382101	.	-	.	gene_id "ENSMUSG00000101331.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28148"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046132.1";
mm10-chrY	HAVANA	transcript	8381405	8382101	.	-	.	gene_id "ENSMUSG00000101331.1"; transcript_id "ENSMUST00000186924.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28148"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28148-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046132.1"; havana_transcript "OTTMUST00000120396.1";
mm10-chrY	HAVANA	exon	8381405	8382101	.	-	.	gene_id "ENSMUSG00000101331.1"; transcript_id "ENSMUST00000186924.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28148"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28148-201"; exon_number 1; exon_id "ENSMUSE00001327110.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046132.1"; havana_transcript "OTTMUST00000120396.1";
mm10-chrY	HAVANA	gene	8412716	8415081	.	+	.	gene_id "ENSMUSG00000101366.1"; gene_type "lincRNA"; gene_name "Gm28147"; level 2; havana_gene "OTTMUSG00000046133.1";
mm10-chrY	HAVANA	transcript	8412716	8415081	.	+	.	gene_id "ENSMUSG00000101366.1"; transcript_id "ENSMUST00000187133.1"; gene_type "lincRNA"; gene_name "Gm28147"; transcript_type "lincRNA"; transcript_name "Gm28147-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046133.1"; havana_transcript "OTTMUST00000120397.1";
mm10-chrY	HAVANA	exon	8412716	8412901	.	+	.	gene_id "ENSMUSG00000101366.1"; transcript_id "ENSMUST00000187133.1"; gene_type "lincRNA"; gene_name "Gm28147"; transcript_type "lincRNA"; transcript_name "Gm28147-201"; exon_number 1; exon_id "ENSMUSE00001320739.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046133.1"; havana_transcript "OTTMUST00000120397.1";
mm10-chrY	HAVANA	exon	8413391	8413572	.	+	.	gene_id "ENSMUSG00000101366.1"; transcript_id "ENSMUST00000187133.1"; gene_type "lincRNA"; gene_name "Gm28147"; transcript_type "lincRNA"; transcript_name "Gm28147-201"; exon_number 2; exon_id "ENSMUSE00001335568.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046133.1"; havana_transcript "OTTMUST00000120397.1";
mm10-chrY	HAVANA	exon	8414302	8414485	.	+	.	gene_id "ENSMUSG00000101366.1"; transcript_id "ENSMUST00000187133.1"; gene_type "lincRNA"; gene_name "Gm28147"; transcript_type "lincRNA"; transcript_name "Gm28147-201"; exon_number 3; exon_id "ENSMUSE00001318546.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046133.1"; havana_transcript "OTTMUST00000120397.1";
mm10-chrY	HAVANA	exon	8415013	8415081	.	+	.	gene_id "ENSMUSG00000101366.1"; transcript_id "ENSMUST00000187133.1"; gene_type "lincRNA"; gene_name "Gm28147"; transcript_type "lincRNA"; transcript_name "Gm28147-201"; exon_number 4; exon_id "ENSMUSE00001319122.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046133.1"; havana_transcript "OTTMUST00000120397.1";
mm10-chrY	HAVANA	gene	8498822	8499519	.	-	.	gene_id "ENSMUSG00000101142.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28142"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046134.1";
mm10-chrY	HAVANA	transcript	8498822	8499519	.	-	.	gene_id "ENSMUSG00000101142.1"; transcript_id "ENSMUST00000186899.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28142"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28142-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046134.1"; havana_transcript "OTTMUST00000120398.1";
mm10-chrY	HAVANA	exon	8498822	8499519	.	-	.	gene_id "ENSMUSG00000101142.1"; transcript_id "ENSMUST00000186899.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28142"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28142-201"; exon_number 1; exon_id "ENSMUSE00001324700.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046134.1"; havana_transcript "OTTMUST00000120398.1";
mm10-chrY	HAVANA	gene	8517395	8517736	.	+	.	gene_id "ENSMUSG00000100047.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28141"; level 2; havana_gene "OTTMUSG00000046135.1";
mm10-chrY	HAVANA	transcript	8517395	8517736	.	+	.	gene_id "ENSMUSG00000100047.1"; transcript_id "ENSMUST00000186676.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28141"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28141-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046135.1"; havana_transcript "OTTMUST00000120399.1";
mm10-chrY	HAVANA	exon	8517395	8517736	.	+	.	gene_id "ENSMUSG00000100047.1"; transcript_id "ENSMUST00000186676.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28141"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28141-201"; exon_number 1; exon_id "ENSMUSE00001331074.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046135.1"; havana_transcript "OTTMUST00000120399.1";
mm10-chrY	HAVANA	gene	8570058	8570756	.	-	.	gene_id "ENSMUSG00000101858.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28144"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046136.1";
mm10-chrY	HAVANA	transcript	8570058	8570756	.	-	.	gene_id "ENSMUSG00000101858.1"; transcript_id "ENSMUST00000188351.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28144"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28144-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046136.1"; havana_transcript "OTTMUST00000120400.1";
mm10-chrY	HAVANA	exon	8570058	8570756	.	-	.	gene_id "ENSMUSG00000101858.1"; transcript_id "ENSMUST00000188351.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28144"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28144-201"; exon_number 1; exon_id "ENSMUSE00001325009.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046136.1"; havana_transcript "OTTMUST00000120400.1";
mm10-chrY	HAVANA	gene	8590448	8590556	.	+	.	gene_id "ENSMUSG00000100933.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28143"; level 2; havana_gene "OTTMUSG00000046137.1";
mm10-chrY	HAVANA	transcript	8590448	8590556	.	+	.	gene_id "ENSMUSG00000100933.1"; transcript_id "ENSMUST00000191082.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28143"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28143-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046137.1"; havana_transcript "OTTMUST00000120401.1";
mm10-chrY	HAVANA	exon	8590448	8590556	.	+	.	gene_id "ENSMUSG00000100933.1"; transcript_id "ENSMUST00000191082.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28143"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28143-201"; exon_number 1; exon_id "ENSMUSE00001321688.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046137.1"; havana_transcript "OTTMUST00000120401.1";
mm10-chrY	HAVANA	gene	8602111	8602724	.	-	.	gene_id "ENSMUSG00000100804.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28150"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046138.1";
mm10-chrY	HAVANA	transcript	8602111	8602724	.	-	.	gene_id "ENSMUSG00000100804.1"; transcript_id "ENSMUST00000187305.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28150"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28150-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046138.1"; havana_transcript "OTTMUST00000120402.1";
mm10-chrY	HAVANA	exon	8602111	8602724	.	-	.	gene_id "ENSMUSG00000100804.1"; transcript_id "ENSMUST00000187305.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28150"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28150-201"; exon_number 1; exon_id "ENSMUSE00001323460.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046138.1"; havana_transcript "OTTMUST00000120402.1";
mm10-chrY	HAVANA	gene	8612098	8612475	.	-	.	gene_id "ENSMUSG00000101672.1"; gene_type "processed_pseudogene"; gene_name "Gm28149"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046139.1";
mm10-chrY	HAVANA	transcript	8612098	8612475	.	-	.	gene_id "ENSMUSG00000101672.1"; transcript_id "ENSMUST00000187102.1"; gene_type "processed_pseudogene"; gene_name "Gm28149"; transcript_type "processed_pseudogene"; transcript_name "Gm28149-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046139.1"; havana_transcript "OTTMUST00000120403.1";
mm10-chrY	HAVANA	exon	8612098	8612475	.	-	.	gene_id "ENSMUSG00000101672.1"; transcript_id "ENSMUST00000187102.1"; gene_type "processed_pseudogene"; gene_name "Gm28149"; transcript_type "processed_pseudogene"; transcript_name "Gm28149-201"; exon_number 1; exon_id "ENSMUSE00001333290.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046139.1"; havana_transcript "OTTMUST00000120403.1";
mm10-chrY	HAVANA	gene	8635534	8636232	.	-	.	gene_id "ENSMUSG00000099929.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28098"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046140.1";
mm10-chrY	HAVANA	transcript	8635534	8636232	.	-	.	gene_id "ENSMUSG00000099929.1"; transcript_id "ENSMUST00000191361.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28098-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046140.1"; havana_transcript "OTTMUST00000120404.1";
mm10-chrY	HAVANA	exon	8635534	8636232	.	-	.	gene_id "ENSMUSG00000099929.1"; transcript_id "ENSMUST00000191361.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28098"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28098-201"; exon_number 1; exon_id "ENSMUSE00001328943.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046140.1"; havana_transcript "OTTMUST00000120404.1";
mm10-chrY	HAVANA	gene	8644954	8654329	.	-	.	gene_id "ENSMUSG00000099939.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28330"; level 2; havana_gene "OTTMUSG00000046141.1";
mm10-chrY	HAVANA	transcript	8644954	8654329	.	-	.	gene_id "ENSMUSG00000099939.1"; transcript_id "ENSMUST00000190353.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28330"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28330-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046141.1"; havana_transcript "OTTMUST00000120405.1";
mm10-chrY	HAVANA	exon	8654221	8654329	.	-	.	gene_id "ENSMUSG00000099939.1"; transcript_id "ENSMUST00000190353.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28330"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28330-201"; exon_number 1; exon_id "ENSMUSE00001330826.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046141.1"; havana_transcript "OTTMUST00000120405.1";
mm10-chrY	HAVANA	exon	8644954	8645015	.	-	.	gene_id "ENSMUSG00000099939.1"; transcript_id "ENSMUST00000190353.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28330"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28330-201"; exon_number 2; exon_id "ENSMUSE00001322559.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046141.1"; havana_transcript "OTTMUST00000120405.1";
mm10-chrY	HAVANA	gene	8675892	8678256	.	+	.	gene_id "ENSMUSG00000100491.1"; gene_type "lincRNA"; gene_name "Gm28331"; level 2; havana_gene "OTTMUSG00000046142.1";
mm10-chrY	HAVANA	transcript	8675892	8678256	.	+	.	gene_id "ENSMUSG00000100491.1"; transcript_id "ENSMUST00000191102.1"; gene_type "lincRNA"; gene_name "Gm28331"; transcript_type "lincRNA"; transcript_name "Gm28331-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046142.1"; havana_transcript "OTTMUST00000120406.1";
mm10-chrY	HAVANA	exon	8675892	8676077	.	+	.	gene_id "ENSMUSG00000100491.1"; transcript_id "ENSMUST00000191102.1"; gene_type "lincRNA"; gene_name "Gm28331"; transcript_type "lincRNA"; transcript_name "Gm28331-201"; exon_number 1; exon_id "ENSMUSE00001330402.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046142.1"; havana_transcript "OTTMUST00000120406.1";
mm10-chrY	HAVANA	exon	8676567	8676748	.	+	.	gene_id "ENSMUSG00000100491.1"; transcript_id "ENSMUST00000191102.1"; gene_type "lincRNA"; gene_name "Gm28331"; transcript_type "lincRNA"; transcript_name "Gm28331-201"; exon_number 2; exon_id "ENSMUSE00001323105.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046142.1"; havana_transcript "OTTMUST00000120406.1";
mm10-chrY	HAVANA	exon	8677478	8677661	.	+	.	gene_id "ENSMUSG00000100491.1"; transcript_id "ENSMUST00000191102.1"; gene_type "lincRNA"; gene_name "Gm28331"; transcript_type "lincRNA"; transcript_name "Gm28331-201"; exon_number 3; exon_id "ENSMUSE00001332752.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046142.1"; havana_transcript "OTTMUST00000120406.1";
mm10-chrY	HAVANA	exon	8678188	8678256	.	+	.	gene_id "ENSMUSG00000100491.1"; transcript_id "ENSMUST00000191102.1"; gene_type "lincRNA"; gene_name "Gm28331"; transcript_type "lincRNA"; transcript_name "Gm28331-201"; exon_number 4; exon_id "ENSMUSE00001331650.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046142.1"; havana_transcript "OTTMUST00000120406.1";
mm10-chrY	HAVANA	gene	8764233	8764931	.	-	.	gene_id "ENSMUSG00000099566.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28099"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046143.1";
mm10-chrY	HAVANA	transcript	8764233	8764931	.	-	.	gene_id "ENSMUSG00000099566.1"; transcript_id "ENSMUST00000186511.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28099"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28099-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046143.1"; havana_transcript "OTTMUST00000120407.1";
mm10-chrY	HAVANA	exon	8764233	8764931	.	-	.	gene_id "ENSMUSG00000099566.1"; transcript_id "ENSMUST00000186511.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28099"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28099-201"; exon_number 1; exon_id "ENSMUSE00001334565.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046143.1"; havana_transcript "OTTMUST00000120407.1";
mm10-chrY	HAVANA	gene	8832821	8835169	.	-	.	gene_id "ENSMUSG00000101053.1"; gene_type "protein_coding"; gene_name "Gm20815"; level 2; havana_gene "OTTMUSG00000046144.2";
mm10-chrY	HAVANA	transcript	8832821	8835169	.	-	.	gene_id "ENSMUSG00000101053.1"; transcript_id "ENSMUST00000115496.3"; gene_type "protein_coding"; gene_name "Gm20815"; transcript_type "protein_coding"; transcript_name "Gm20815-201"; level 2; protein_id "ENSMUSP00000111158.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85850.1"; havana_gene "OTTMUSG00000046144.2"; havana_transcript "OTTMUST00000120408.2";
mm10-chrY	HAVANA	exon	8835046	8835169	.	-	.	gene_id "ENSMUSG00000101053.1"; transcript_id "ENSMUST00000115496.3"; gene_type "protein_coding"; gene_name "Gm20815"; transcript_type "protein_coding"; transcript_name "Gm20815-201"; exon_number 1; exon_id "ENSMUSE00001064956.1"; level 2; protein_id "ENSMUSP00000111158.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85850.1"; havana_gene "OTTMUSG00000046144.2"; havana_transcript "OTTMUST00000120408.2";
mm10-chrY	HAVANA	exon	8832821	8833920	.	-	.	gene_id "ENSMUSG00000101053.1"; transcript_id "ENSMUST00000115496.3"; gene_type "protein_coding"; gene_name "Gm20815"; transcript_type "protein_coding"; transcript_name "Gm20815-201"; exon_number 2; exon_id "ENSMUSE00000971766.2"; level 2; protein_id "ENSMUSP00000111158.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85850.1"; havana_gene "OTTMUSG00000046144.2"; havana_transcript "OTTMUST00000120408.2";
mm10-chrY	HAVANA	CDS	8832959	8833639	.	-	0	gene_id "ENSMUSG00000101053.1"; transcript_id "ENSMUST00000115496.3"; gene_type "protein_coding"; gene_name "Gm20815"; transcript_type "protein_coding"; transcript_name "Gm20815-201"; exon_number 2; exon_id "ENSMUSE00000971766.2"; level 2; protein_id "ENSMUSP00000111158.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85850.1"; havana_gene "OTTMUSG00000046144.2"; havana_transcript "OTTMUST00000120408.2";
mm10-chrY	HAVANA	start_codon	8833637	8833639	.	-	0	gene_id "ENSMUSG00000101053.1"; transcript_id "ENSMUST00000115496.3"; gene_type "protein_coding"; gene_name "Gm20815"; transcript_type "protein_coding"; transcript_name "Gm20815-201"; exon_number 2; exon_id "ENSMUSE00000971766.2"; level 2; protein_id "ENSMUSP00000111158.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85850.1"; havana_gene "OTTMUSG00000046144.2"; havana_transcript "OTTMUST00000120408.2";
mm10-chrY	HAVANA	stop_codon	8832956	8832958	.	-	0	gene_id "ENSMUSG00000101053.1"; transcript_id "ENSMUST00000115496.3"; gene_type "protein_coding"; gene_name "Gm20815"; transcript_type "protein_coding"; transcript_name "Gm20815-201"; exon_number 2; exon_id "ENSMUSE00000971766.2"; level 2; protein_id "ENSMUSP00000111158.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85850.1"; havana_gene "OTTMUSG00000046144.2"; havana_transcript "OTTMUST00000120408.2";
mm10-chrY	HAVANA	UTR	8835046	8835169	.	-	.	gene_id "ENSMUSG00000101053.1"; transcript_id "ENSMUST00000115496.3"; gene_type "protein_coding"; gene_name "Gm20815"; transcript_type "protein_coding"; transcript_name "Gm20815-201"; exon_number 1; exon_id "ENSMUSE00001064956.1"; level 2; protein_id "ENSMUSP00000111158.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85850.1"; havana_gene "OTTMUSG00000046144.2"; havana_transcript "OTTMUST00000120408.2";
mm10-chrY	HAVANA	UTR	8832821	8832958	.	-	.	gene_id "ENSMUSG00000101053.1"; transcript_id "ENSMUST00000115496.3"; gene_type "protein_coding"; gene_name "Gm20815"; transcript_type "protein_coding"; transcript_name "Gm20815-201"; exon_number 2; exon_id "ENSMUSE00000971766.2"; level 2; protein_id "ENSMUSP00000111158.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85850.1"; havana_gene "OTTMUSG00000046144.2"; havana_transcript "OTTMUST00000120408.2";
mm10-chrY	HAVANA	UTR	8833640	8833920	.	-	.	gene_id "ENSMUSG00000101053.1"; transcript_id "ENSMUST00000115496.3"; gene_type "protein_coding"; gene_name "Gm20815"; transcript_type "protein_coding"; transcript_name "Gm20815-201"; exon_number 2; exon_id "ENSMUSE00000971766.2"; level 2; protein_id "ENSMUSP00000111158.2"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85850.1"; havana_gene "OTTMUSG00000046144.2"; havana_transcript "OTTMUST00000120408.2";
mm10-chrY	HAVANA	gene	8853288	8853396	.	+	.	gene_id "ENSMUSG00000101732.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28328"; level 2; havana_gene "OTTMUSG00000046145.1";
mm10-chrY	HAVANA	transcript	8853288	8853396	.	+	.	gene_id "ENSMUSG00000101732.1"; transcript_id "ENSMUST00000188869.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28328"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28328-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046145.1"; havana_transcript "OTTMUST00000120409.1";
mm10-chrY	HAVANA	exon	8853288	8853396	.	+	.	gene_id "ENSMUSG00000101732.1"; transcript_id "ENSMUST00000188869.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28328"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28328-201"; exon_number 1; exon_id "ENSMUSE00001319123.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046145.1"; havana_transcript "OTTMUST00000120409.1";
mm10-chrY	HAVANA	gene	8911342	8912030	.	-	.	gene_id "ENSMUSG00000101056.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28329"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046146.1";
mm10-chrY	HAVANA	transcript	8911342	8912030	.	-	.	gene_id "ENSMUSG00000101056.1"; transcript_id "ENSMUST00000191208.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28329"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28329-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046146.1"; havana_transcript "OTTMUST00000120410.1";
mm10-chrY	HAVANA	exon	8911342	8912030	.	-	.	gene_id "ENSMUSG00000101056.1"; transcript_id "ENSMUST00000191208.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28329"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28329-201"; exon_number 1; exon_id "ENSMUSE00001329020.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046146.1"; havana_transcript "OTTMUST00000120410.1";
mm10-chrY	HAVANA	gene	8931764	8931872	.	+	.	gene_id "ENSMUSG00000099904.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28270"; level 2; havana_gene "OTTMUSG00000046147.1";
mm10-chrY	HAVANA	transcript	8931764	8931872	.	+	.	gene_id "ENSMUSG00000099904.1"; transcript_id "ENSMUST00000188550.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28270"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28270-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046147.1"; havana_transcript "OTTMUST00000120411.1";
mm10-chrY	HAVANA	exon	8931764	8931872	.	+	.	gene_id "ENSMUSG00000099904.1"; transcript_id "ENSMUST00000188550.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28270"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28270-201"; exon_number 1; exon_id "ENSMUSE00001320627.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046147.1"; havana_transcript "OTTMUST00000120411.1";
mm10-chrY	HAVANA	gene	8943097	8943711	.	-	.	gene_id "ENSMUSG00000099523.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28327"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046148.1";
mm10-chrY	HAVANA	transcript	8943097	8943711	.	-	.	gene_id "ENSMUSG00000099523.1"; transcript_id "ENSMUST00000189638.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28327"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28327-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046148.1"; havana_transcript "OTTMUST00000120412.1";
mm10-chrY	HAVANA	exon	8943097	8943711	.	-	.	gene_id "ENSMUSG00000099523.1"; transcript_id "ENSMUST00000189638.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28327"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28327-201"; exon_number 1; exon_id "ENSMUSE00001323836.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046148.1"; havana_transcript "OTTMUST00000120412.1";
mm10-chrY	HAVANA	gene	8956616	8956981	.	-	.	gene_id "ENSMUSG00000100542.1"; gene_type "processed_pseudogene"; gene_name "Gm28097"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046149.1";
mm10-chrY	HAVANA	transcript	8956616	8956981	.	-	.	gene_id "ENSMUSG00000100542.1"; transcript_id "ENSMUST00000187333.1"; gene_type "processed_pseudogene"; gene_name "Gm28097"; transcript_type "processed_pseudogene"; transcript_name "Gm28097-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046149.1"; havana_transcript "OTTMUST00000120413.1";
mm10-chrY	HAVANA	exon	8956616	8956981	.	-	.	gene_id "ENSMUSG00000100542.1"; transcript_id "ENSMUST00000187333.1"; gene_type "processed_pseudogene"; gene_name "Gm28097"; transcript_type "processed_pseudogene"; transcript_name "Gm28097-201"; exon_number 1; exon_id "ENSMUSE00001334354.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046149.1"; havana_transcript "OTTMUST00000120413.1";
mm10-chrY	HAVANA	gene	8980001	8980699	.	-	.	gene_id "ENSMUSG00000099956.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29365"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046150.1";
mm10-chrY	HAVANA	transcript	8980001	8980699	.	-	.	gene_id "ENSMUSG00000099956.1"; transcript_id "ENSMUST00000189461.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29365"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29365-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046150.1"; havana_transcript "OTTMUST00000120414.1";
mm10-chrY	HAVANA	exon	8980001	8980699	.	-	.	gene_id "ENSMUSG00000099956.1"; transcript_id "ENSMUST00000189461.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29365"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29365-201"; exon_number 1; exon_id "ENSMUSE00001325186.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046150.1"; havana_transcript "OTTMUST00000120414.1";
mm10-chrY	HAVANA	gene	8986692	8990039	.	-	.	gene_id "ENSMUSG00000100080.1"; gene_type "lincRNA"; gene_name "Gm29364"; level 2; havana_gene "OTTMUSG00000046152.1";
mm10-chrY	HAVANA	transcript	8986692	8990039	.	-	.	gene_id "ENSMUSG00000100080.1"; transcript_id "ENSMUST00000185289.1"; gene_type "lincRNA"; gene_name "Gm29364"; transcript_type "lincRNA"; transcript_name "Gm29364-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046152.1"; havana_transcript "OTTMUST00000120416.1";
mm10-chrY	HAVANA	exon	8989817	8990039	.	-	.	gene_id "ENSMUSG00000100080.1"; transcript_id "ENSMUST00000185289.1"; gene_type "lincRNA"; gene_name "Gm29364"; transcript_type "lincRNA"; transcript_name "Gm29364-201"; exon_number 1; exon_id "ENSMUSE00001330715.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046152.1"; havana_transcript "OTTMUST00000120416.1";
mm10-chrY	HAVANA	exon	8986692	8988635	.	-	.	gene_id "ENSMUSG00000100080.1"; transcript_id "ENSMUST00000185289.1"; gene_type "lincRNA"; gene_name "Gm29364"; transcript_type "lincRNA"; transcript_name "Gm29364-201"; exon_number 2; exon_id "ENSMUSE00001331651.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046152.1"; havana_transcript "OTTMUST00000120416.1";
mm10-chrY	HAVANA	gene	9022596	9024960	.	+	.	gene_id "ENSMUSG00000101441.1"; gene_type "lincRNA"; gene_name "Gm29363"; level 2; havana_gene "OTTMUSG00000046153.1";
mm10-chrY	HAVANA	transcript	9022596	9024960	.	+	.	gene_id "ENSMUSG00000101441.1"; transcript_id "ENSMUST00000189365.1"; gene_type "lincRNA"; gene_name "Gm29363"; transcript_type "lincRNA"; transcript_name "Gm29363-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046153.1"; havana_transcript "OTTMUST00000120417.1";
mm10-chrY	HAVANA	exon	9022596	9022781	.	+	.	gene_id "ENSMUSG00000101441.1"; transcript_id "ENSMUST00000189365.1"; gene_type "lincRNA"; gene_name "Gm29363"; transcript_type "lincRNA"; transcript_name "Gm29363-201"; exon_number 1; exon_id "ENSMUSE00001319605.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046153.1"; havana_transcript "OTTMUST00000120417.1";
mm10-chrY	HAVANA	exon	9023270	9023451	.	+	.	gene_id "ENSMUSG00000101441.1"; transcript_id "ENSMUST00000189365.1"; gene_type "lincRNA"; gene_name "Gm29363"; transcript_type "lincRNA"; transcript_name "Gm29363-201"; exon_number 2; exon_id "ENSMUSE00001324850.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046153.1"; havana_transcript "OTTMUST00000120417.1";
mm10-chrY	HAVANA	exon	9024181	9024364	.	+	.	gene_id "ENSMUSG00000101441.1"; transcript_id "ENSMUST00000189365.1"; gene_type "lincRNA"; gene_name "Gm29363"; transcript_type "lincRNA"; transcript_name "Gm29363-201"; exon_number 3; exon_id "ENSMUSE00001332061.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046153.1"; havana_transcript "OTTMUST00000120417.1";
mm10-chrY	HAVANA	exon	9024892	9024960	.	+	.	gene_id "ENSMUSG00000101441.1"; transcript_id "ENSMUST00000189365.1"; gene_type "lincRNA"; gene_name "Gm29363"; transcript_type "lincRNA"; transcript_name "Gm29363-201"; exon_number 4; exon_id "ENSMUSE00001335070.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046153.1"; havana_transcript "OTTMUST00000120417.1";
mm10-chrY	HAVANA	gene	9130999	9133924	.	-	.	gene_id "ENSMUSG00000091077.3"; gene_type "protein_coding"; gene_name "Gm21292"; level 2; havana_gene "OTTMUSG00000046154.2";
mm10-chrY	ENSEMBL	transcript	9130999	9132561	.	-	.	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000171947.2"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-201"; level 3; protein_id "ENSMUSP00000131393.2"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2";
mm10-chrY	ENSEMBL	exon	9130999	9132561	.	-	.	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000171947.2"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-201"; exon_number 1; exon_id "ENSMUSE00000906038.2"; level 3; protein_id "ENSMUSP00000131393.2"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2";
mm10-chrY	ENSEMBL	CDS	9131705	9132385	.	-	0	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000171947.2"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-201"; exon_number 1; exon_id "ENSMUSE00000906038.2"; level 3; protein_id "ENSMUSP00000131393.2"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2";
mm10-chrY	ENSEMBL	start_codon	9132383	9132385	.	-	0	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000171947.2"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-201"; exon_number 1; exon_id "ENSMUSE00000906038.2"; level 3; protein_id "ENSMUSP00000131393.2"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2";
mm10-chrY	ENSEMBL	stop_codon	9131702	9131704	.	-	0	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000171947.2"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-201"; exon_number 1; exon_id "ENSMUSE00000906038.2"; level 3; protein_id "ENSMUSP00000131393.2"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2";
mm10-chrY	ENSEMBL	UTR	9130999	9131704	.	-	.	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000171947.2"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-201"; exon_number 1; exon_id "ENSMUSE00000906038.2"; level 3; protein_id "ENSMUSP00000131393.2"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2";
mm10-chrY	ENSEMBL	UTR	9132386	9132561	.	-	.	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000171947.2"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-201"; exon_number 1; exon_id "ENSMUSE00000906038.2"; level 3; protein_id "ENSMUSP00000131393.2"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2";
mm10-chrY	HAVANA	transcript	9131568	9133924	.	-	.	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000190329.1"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-202"; level 2; protein_id "ENSMUSP00000139843.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2"; havana_transcript "OTTMUST00000120418.2";
mm10-chrY	HAVANA	exon	9133797	9133924	.	-	.	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000190329.1"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-202"; exon_number 1; exon_id "ENSMUSE00001322711.1"; level 2; protein_id "ENSMUSP00000139843.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2"; havana_transcript "OTTMUST00000120418.2";
mm10-chrY	HAVANA	exon	9131568	9132664	.	-	.	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000190329.1"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-202"; exon_number 2; exon_id "ENSMUSE00001335427.1"; level 2; protein_id "ENSMUSP00000139843.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2"; havana_transcript "OTTMUST00000120418.2";
mm10-chrY	HAVANA	CDS	9131705	9132385	.	-	0	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000190329.1"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-202"; exon_number 2; exon_id "ENSMUSE00001335427.1"; level 2; protein_id "ENSMUSP00000139843.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2"; havana_transcript "OTTMUST00000120418.2";
mm10-chrY	HAVANA	start_codon	9132383	9132385	.	-	0	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000190329.1"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-202"; exon_number 2; exon_id "ENSMUSE00001335427.1"; level 2; protein_id "ENSMUSP00000139843.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2"; havana_transcript "OTTMUST00000120418.2";
mm10-chrY	HAVANA	stop_codon	9131702	9131704	.	-	0	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000190329.1"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-202"; exon_number 2; exon_id "ENSMUSE00001335427.1"; level 2; protein_id "ENSMUSP00000139843.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2"; havana_transcript "OTTMUST00000120418.2";
mm10-chrY	HAVANA	UTR	9133797	9133924	.	-	.	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000190329.1"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-202"; exon_number 1; exon_id "ENSMUSE00001322711.1"; level 2; protein_id "ENSMUSP00000139843.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2"; havana_transcript "OTTMUST00000120418.2";
mm10-chrY	HAVANA	UTR	9131568	9131704	.	-	.	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000190329.1"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-202"; exon_number 2; exon_id "ENSMUSE00001335427.1"; level 2; protein_id "ENSMUSP00000139843.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2"; havana_transcript "OTTMUST00000120418.2";
mm10-chrY	HAVANA	UTR	9132386	9132664	.	-	.	gene_id "ENSMUSG00000091077.3"; transcript_id "ENSMUST00000190329.1"; gene_type "protein_coding"; gene_name "Gm21292"; transcript_type "protein_coding"; transcript_name "Gm21292-202"; exon_number 2; exon_id "ENSMUSE00001335427.1"; level 2; protein_id "ENSMUSP00000139843.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046154.2"; havana_transcript "OTTMUST00000120418.2";
mm10-chrY	HAVANA	gene	9199824	9202190	.	-	.	gene_id "ENSMUSG00000094679.2"; gene_type "protein_coding"; gene_name "Gm21721"; level 2; havana_gene "OTTMUSG00000046155.2";
mm10-chrY	HAVANA	transcript	9199824	9202190	.	-	.	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000189253.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-202"; level 2; protein_id "ENSMUSP00000139987.1"; transcript_support_level "3"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2"; havana_transcript "OTTMUST00000120419.2";
mm10-chrY	HAVANA	exon	9202067	9202190	.	-	.	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000189253.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-202"; exon_number 1; exon_id "ENSMUSE00001323931.1"; level 2; protein_id "ENSMUSP00000139987.1"; transcript_support_level "3"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2"; havana_transcript "OTTMUST00000120419.2";
mm10-chrY	HAVANA	exon	9199824	9200924	.	-	.	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000189253.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-202"; exon_number 2; exon_id "ENSMUSE00001322551.1"; level 2; protein_id "ENSMUSP00000139987.1"; transcript_support_level "3"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2"; havana_transcript "OTTMUST00000120419.2";
mm10-chrY	HAVANA	CDS	9199963	9200643	.	-	0	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000189253.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-202"; exon_number 2; exon_id "ENSMUSE00001322551.1"; level 2; protein_id "ENSMUSP00000139987.1"; transcript_support_level "3"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2"; havana_transcript "OTTMUST00000120419.2";
mm10-chrY	HAVANA	start_codon	9200641	9200643	.	-	0	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000189253.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-202"; exon_number 2; exon_id "ENSMUSE00001322551.1"; level 2; protein_id "ENSMUSP00000139987.1"; transcript_support_level "3"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2"; havana_transcript "OTTMUST00000120419.2";
mm10-chrY	HAVANA	stop_codon	9199960	9199962	.	-	0	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000189253.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-202"; exon_number 2; exon_id "ENSMUSE00001322551.1"; level 2; protein_id "ENSMUSP00000139987.1"; transcript_support_level "3"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2"; havana_transcript "OTTMUST00000120419.2";
mm10-chrY	HAVANA	UTR	9202067	9202190	.	-	.	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000189253.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-202"; exon_number 1; exon_id "ENSMUSE00001323931.1"; level 2; protein_id "ENSMUSP00000139987.1"; transcript_support_level "3"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2"; havana_transcript "OTTMUST00000120419.2";
mm10-chrY	HAVANA	UTR	9199824	9199962	.	-	.	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000189253.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-202"; exon_number 2; exon_id "ENSMUSE00001322551.1"; level 2; protein_id "ENSMUSP00000139987.1"; transcript_support_level "3"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2"; havana_transcript "OTTMUST00000120419.2";
mm10-chrY	HAVANA	UTR	9200644	9200924	.	-	.	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000189253.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-202"; exon_number 2; exon_id "ENSMUSE00001322551.1"; level 2; protein_id "ENSMUSP00000139987.1"; transcript_support_level "3"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2"; havana_transcript "OTTMUST00000120419.2";
mm10-chrY	ENSEMBL	transcript	9199960	9200643	.	-	.	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000179595.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-201"; level 3; protein_id "ENSMUSP00000136336.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2";
mm10-chrY	ENSEMBL	exon	9199960	9200643	.	-	.	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000179595.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-201"; exon_number 1; exon_id "ENSMUSE00001007951.1"; level 3; protein_id "ENSMUSP00000136336.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2";
mm10-chrY	ENSEMBL	CDS	9199963	9200643	.	-	0	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000179595.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-201"; exon_number 1; exon_id "ENSMUSE00001007951.1"; level 3; protein_id "ENSMUSP00000136336.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2";
mm10-chrY	ENSEMBL	start_codon	9200641	9200643	.	-	0	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000179595.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-201"; exon_number 1; exon_id "ENSMUSE00001007951.1"; level 3; protein_id "ENSMUSP00000136336.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2";
mm10-chrY	ENSEMBL	stop_codon	9199960	9199962	.	-	0	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000179595.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-201"; exon_number 1; exon_id "ENSMUSE00001007951.1"; level 3; protein_id "ENSMUSP00000136336.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2";
mm10-chrY	ENSEMBL	UTR	9199960	9199962	.	-	.	gene_id "ENSMUSG00000094679.2"; transcript_id "ENSMUST00000179595.1"; gene_type "protein_coding"; gene_name "Gm21721"; transcript_type "protein_coding"; transcript_name "Gm21721-201"; exon_number 1; exon_id "ENSMUSE00001007951.1"; level 3; protein_id "ENSMUSP00000136336.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046155.2";
mm10-chrY	HAVANA	gene	9230662	9231360	.	-	.	gene_id "ENSMUSG00000100109.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29366"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046156.1";
mm10-chrY	HAVANA	transcript	9230662	9231360	.	-	.	gene_id "ENSMUSG00000100109.1"; transcript_id "ENSMUST00000190481.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29366"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29366-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046156.1"; havana_transcript "OTTMUST00000120420.1";
mm10-chrY	HAVANA	exon	9230662	9231360	.	-	.	gene_id "ENSMUSG00000100109.1"; transcript_id "ENSMUST00000190481.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29366"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29366-201"; exon_number 1; exon_id "ENSMUSE00001327681.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046156.1"; havana_transcript "OTTMUST00000120420.1";
mm10-chrY	HAVANA	gene	9244109	9244489	.	-	.	gene_id "ENSMUSG00000100848.1"; gene_type "processed_pseudogene"; gene_name "Gm29281"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046157.1";
mm10-chrY	HAVANA	transcript	9244109	9244489	.	-	.	gene_id "ENSMUSG00000100848.1"; transcript_id "ENSMUST00000188077.1"; gene_type "processed_pseudogene"; gene_name "Gm29281"; transcript_type "processed_pseudogene"; transcript_name "Gm29281-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046157.1"; havana_transcript "OTTMUST00000120421.1";
mm10-chrY	HAVANA	exon	9244109	9244489	.	-	.	gene_id "ENSMUSG00000100848.1"; transcript_id "ENSMUST00000188077.1"; gene_type "processed_pseudogene"; gene_name "Gm29281"; transcript_type "processed_pseudogene"; transcript_name "Gm29281-201"; exon_number 1; exon_id "ENSMUSE00001332899.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046157.1"; havana_transcript "OTTMUST00000120421.1";
mm10-chrY	HAVANA	gene	9267565	9268263	.	-	.	gene_id "ENSMUSG00000100105.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29330"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046158.1";
mm10-chrY	HAVANA	transcript	9267565	9268263	.	-	.	gene_id "ENSMUSG00000100105.1"; transcript_id "ENSMUST00000190032.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29330"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29330-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046158.1"; havana_transcript "OTTMUST00000120422.1";
mm10-chrY	HAVANA	exon	9267565	9268263	.	-	.	gene_id "ENSMUSG00000100105.1"; transcript_id "ENSMUST00000190032.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29330"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29330-201"; exon_number 1; exon_id "ENSMUSE00001321839.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046158.1"; havana_transcript "OTTMUST00000120422.1";
mm10-chrY	HAVANA	gene	9307879	9310243	.	+	.	gene_id "ENSMUSG00000101095.1"; gene_type "lincRNA"; gene_name "Gm29329"; level 2; havana_gene "OTTMUSG00000046159.1";
mm10-chrY	HAVANA	transcript	9307879	9310243	.	+	.	gene_id "ENSMUSG00000101095.1"; transcript_id "ENSMUST00000189053.1"; gene_type "lincRNA"; gene_name "Gm29329"; transcript_type "lincRNA"; transcript_name "Gm29329-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046159.1"; havana_transcript "OTTMUST00000120423.1";
mm10-chrY	HAVANA	exon	9307879	9308064	.	+	.	gene_id "ENSMUSG00000101095.1"; transcript_id "ENSMUST00000189053.1"; gene_type "lincRNA"; gene_name "Gm29329"; transcript_type "lincRNA"; transcript_name "Gm29329-201"; exon_number 1; exon_id "ENSMUSE00001324236.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046159.1"; havana_transcript "OTTMUST00000120423.1";
mm10-chrY	HAVANA	exon	9308554	9308735	.	+	.	gene_id "ENSMUSG00000101095.1"; transcript_id "ENSMUST00000189053.1"; gene_type "lincRNA"; gene_name "Gm29329"; transcript_type "lincRNA"; transcript_name "Gm29329-201"; exon_number 2; exon_id "ENSMUSE00001323221.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046159.1"; havana_transcript "OTTMUST00000120423.1";
mm10-chrY	HAVANA	exon	9309465	9309648	.	+	.	gene_id "ENSMUSG00000101095.1"; transcript_id "ENSMUST00000189053.1"; gene_type "lincRNA"; gene_name "Gm29329"; transcript_type "lincRNA"; transcript_name "Gm29329-201"; exon_number 3; exon_id "ENSMUSE00001324888.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046159.1"; havana_transcript "OTTMUST00000120423.1";
mm10-chrY	HAVANA	exon	9310175	9310243	.	+	.	gene_id "ENSMUSG00000101095.1"; transcript_id "ENSMUST00000189053.1"; gene_type "lincRNA"; gene_name "Gm29329"; transcript_type "lincRNA"; transcript_name "Gm29329-201"; exon_number 4; exon_id "ENSMUSE00001331739.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046159.1"; havana_transcript "OTTMUST00000120423.1";
mm10-chrY	HAVANA	gene	9344836	9347184	.	-	.	gene_id "ENSMUSG00000094773.2"; gene_type "protein_coding"; gene_name "Gm21812"; level 2; havana_gene "OTTMUSG00000046160.2";
mm10-chrY	HAVANA	transcript	9344836	9347184	.	-	.	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000188908.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-202"; level 2; protein_id "ENSMUSP00000140302.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2"; havana_transcript "OTTMUST00000120424.2";
mm10-chrY	HAVANA	exon	9347061	9347184	.	-	.	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000188908.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-202"; exon_number 1; exon_id "ENSMUSE00001328597.1"; level 2; protein_id "ENSMUSP00000140302.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2"; havana_transcript "OTTMUST00000120424.2";
mm10-chrY	HAVANA	exon	9344836	9345935	.	-	.	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000188908.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-202"; exon_number 2; exon_id "ENSMUSE00001320503.1"; level 2; protein_id "ENSMUSP00000140302.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2"; havana_transcript "OTTMUST00000120424.2";
mm10-chrY	HAVANA	CDS	9344974	9345654	.	-	0	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000188908.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-202"; exon_number 2; exon_id "ENSMUSE00001320503.1"; level 2; protein_id "ENSMUSP00000140302.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2"; havana_transcript "OTTMUST00000120424.2";
mm10-chrY	HAVANA	start_codon	9345652	9345654	.	-	0	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000188908.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-202"; exon_number 2; exon_id "ENSMUSE00001320503.1"; level 2; protein_id "ENSMUSP00000140302.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2"; havana_transcript "OTTMUST00000120424.2";
mm10-chrY	HAVANA	stop_codon	9344971	9344973	.	-	0	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000188908.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-202"; exon_number 2; exon_id "ENSMUSE00001320503.1"; level 2; protein_id "ENSMUSP00000140302.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2"; havana_transcript "OTTMUST00000120424.2";
mm10-chrY	HAVANA	UTR	9347061	9347184	.	-	.	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000188908.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-202"; exon_number 1; exon_id "ENSMUSE00001328597.1"; level 2; protein_id "ENSMUSP00000140302.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2"; havana_transcript "OTTMUST00000120424.2";
mm10-chrY	HAVANA	UTR	9344836	9344973	.	-	.	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000188908.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-202"; exon_number 2; exon_id "ENSMUSE00001320503.1"; level 2; protein_id "ENSMUSP00000140302.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2"; havana_transcript "OTTMUST00000120424.2";
mm10-chrY	HAVANA	UTR	9345655	9345935	.	-	.	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000188908.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-202"; exon_number 2; exon_id "ENSMUSE00001320503.1"; level 2; protein_id "ENSMUSP00000140302.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2"; havana_transcript "OTTMUST00000120424.2";
mm10-chrY	ENSEMBL	transcript	9344971	9345654	.	-	.	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000179590.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-201"; level 3; protein_id "ENSMUSP00000136639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2";
mm10-chrY	ENSEMBL	exon	9344971	9345654	.	-	.	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000179590.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-201"; exon_number 1; exon_id "ENSMUSE00000997684.1"; level 3; protein_id "ENSMUSP00000136639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2";
mm10-chrY	ENSEMBL	CDS	9344974	9345654	.	-	0	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000179590.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-201"; exon_number 1; exon_id "ENSMUSE00000997684.1"; level 3; protein_id "ENSMUSP00000136639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2";
mm10-chrY	ENSEMBL	start_codon	9345652	9345654	.	-	0	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000179590.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-201"; exon_number 1; exon_id "ENSMUSE00000997684.1"; level 3; protein_id "ENSMUSP00000136639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2";
mm10-chrY	ENSEMBL	stop_codon	9344971	9344973	.	-	0	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000179590.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-201"; exon_number 1; exon_id "ENSMUSE00000997684.1"; level 3; protein_id "ENSMUSP00000136639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2";
mm10-chrY	ENSEMBL	UTR	9344971	9344973	.	-	.	gene_id "ENSMUSG00000094773.2"; transcript_id "ENSMUST00000179590.1"; gene_type "protein_coding"; gene_name "Gm21812"; transcript_type "protein_coding"; transcript_name "Gm21812-201"; exon_number 1; exon_id "ENSMUSE00000997684.1"; level 3; protein_id "ENSMUSP00000136639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046160.2";
mm10-chrY	HAVANA	gene	9365390	9365498	.	+	.	gene_id "ENSMUSG00000099688.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29535"; level 2; havana_gene "OTTMUSG00000046161.1";
mm10-chrY	HAVANA	transcript	9365390	9365498	.	+	.	gene_id "ENSMUSG00000099688.1"; transcript_id "ENSMUST00000185723.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29535"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29535-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046161.1"; havana_transcript "OTTMUST00000120425.1";
mm10-chrY	HAVANA	exon	9365390	9365498	.	+	.	gene_id "ENSMUSG00000099688.1"; transcript_id "ENSMUST00000185723.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29535"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29535-201"; exon_number 1; exon_id "ENSMUSE00001321822.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046161.1"; havana_transcript "OTTMUST00000120425.1";
mm10-chrY	HAVANA	gene	9377058	9377672	.	-	.	gene_id "ENSMUSG00000101094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29533"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046162.1";
mm10-chrY	HAVANA	transcript	9377058	9377672	.	-	.	gene_id "ENSMUSG00000101094.1"; transcript_id "ENSMUST00000190403.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29533"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29533-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046162.1"; havana_transcript "OTTMUST00000120426.1";
mm10-chrY	HAVANA	exon	9377058	9377672	.	-	.	gene_id "ENSMUSG00000101094.1"; transcript_id "ENSMUST00000190403.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29533"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29533-201"; exon_number 1; exon_id "ENSMUSE00001326137.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046162.1"; havana_transcript "OTTMUST00000120426.1";
mm10-chrY	HAVANA	gene	9387098	9387479	.	-	.	gene_id "ENSMUSG00000101647.1"; gene_type "processed_pseudogene"; gene_name "Gm29534"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046163.1";
mm10-chrY	HAVANA	transcript	9387098	9387479	.	-	.	gene_id "ENSMUSG00000101647.1"; transcript_id "ENSMUST00000187328.1"; gene_type "processed_pseudogene"; gene_name "Gm29534"; transcript_type "processed_pseudogene"; transcript_name "Gm29534-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046163.1"; havana_transcript "OTTMUST00000120427.1";
mm10-chrY	HAVANA	exon	9387098	9387479	.	-	.	gene_id "ENSMUSG00000101647.1"; transcript_id "ENSMUST00000187328.1"; gene_type "processed_pseudogene"; gene_name "Gm29534"; transcript_type "processed_pseudogene"; transcript_name "Gm29534-201"; exon_number 1; exon_id "ENSMUSE00001333276.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046163.1"; havana_transcript "OTTMUST00000120427.1";
mm10-chrY	HAVANA	gene	9413518	9416148	.	-	.	gene_id "ENSMUSG00000096223.2"; gene_type "protein_coding"; gene_name "Gm21874"; level 1; havana_gene "OTTMUSG00000046164.1";
mm10-chrY	HAVANA	transcript	9413518	9416148	.	-	.	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000190315.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-202"; level 1; protein_id "ENSMUSP00000139963.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046164.1"; havana_transcript "OTTMUST00000120428.1";
mm10-chrY	HAVANA	exon	9415958	9416148	.	-	.	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000190315.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-202"; exon_number 1; exon_id "ENSMUSE00001324712.1"; level 1; protein_id "ENSMUSP00000139963.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046164.1"; havana_transcript "OTTMUST00000120428.1";
mm10-chrY	HAVANA	exon	9415351	9415733	.	-	.	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000190315.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-202"; exon_number 2; exon_id "ENSMUSE00001326134.1"; level 1; protein_id "ENSMUSP00000139963.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046164.1"; havana_transcript "OTTMUST00000120428.1";
mm10-chrY	HAVANA	exon	9413518	9414481	.	-	.	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000190315.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-202"; exon_number 3; exon_id "ENSMUSE00001319154.1"; level 1; protein_id "ENSMUSP00000139963.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046164.1"; havana_transcript "OTTMUST00000120428.1";
mm10-chrY	HAVANA	CDS	9413646	9414341	.	-	0	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000190315.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-202"; exon_number 3; exon_id "ENSMUSE00001319154.1"; level 1; protein_id "ENSMUSP00000139963.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046164.1"; havana_transcript "OTTMUST00000120428.1";
mm10-chrY	HAVANA	start_codon	9414339	9414341	.	-	0	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000190315.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-202"; exon_number 3; exon_id "ENSMUSE00001319154.1"; level 1; protein_id "ENSMUSP00000139963.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046164.1"; havana_transcript "OTTMUST00000120428.1";
mm10-chrY	HAVANA	stop_codon	9413643	9413645	.	-	0	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000190315.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-202"; exon_number 3; exon_id "ENSMUSE00001319154.1"; level 1; protein_id "ENSMUSP00000139963.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046164.1"; havana_transcript "OTTMUST00000120428.1";
mm10-chrY	HAVANA	UTR	9415958	9416148	.	-	.	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000190315.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-202"; exon_number 1; exon_id "ENSMUSE00001324712.1"; level 1; protein_id "ENSMUSP00000139963.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046164.1"; havana_transcript "OTTMUST00000120428.1";
mm10-chrY	HAVANA	UTR	9415351	9415733	.	-	.	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000190315.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-202"; exon_number 2; exon_id "ENSMUSE00001326134.1"; level 1; protein_id "ENSMUSP00000139963.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046164.1"; havana_transcript "OTTMUST00000120428.1";
mm10-chrY	HAVANA	UTR	9413518	9413645	.	-	.	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000190315.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-202"; exon_number 3; exon_id "ENSMUSE00001319154.1"; level 1; protein_id "ENSMUSP00000139963.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046164.1"; havana_transcript "OTTMUST00000120428.1";
mm10-chrY	HAVANA	UTR	9414342	9414481	.	-	.	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000190315.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-202"; exon_number 3; exon_id "ENSMUSE00001319154.1"; level 1; protein_id "ENSMUSP00000139963.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; tag "exp_conf"; havana_gene "OTTMUSG00000046164.1"; havana_transcript "OTTMUST00000120428.1";
mm10-chrY	ENSEMBL	transcript	9413643	9414341	.	-	.	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000178374.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-201"; level 3; protein_id "ENSMUSP00000137027.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046164.1";
mm10-chrY	ENSEMBL	exon	9413643	9414341	.	-	.	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000178374.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-201"; exon_number 1; exon_id "ENSMUSE00001087364.1"; level 3; protein_id "ENSMUSP00000137027.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046164.1";
mm10-chrY	ENSEMBL	CDS	9413646	9414341	.	-	0	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000178374.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-201"; exon_number 1; exon_id "ENSMUSE00001087364.1"; level 3; protein_id "ENSMUSP00000137027.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046164.1";
mm10-chrY	ENSEMBL	start_codon	9414339	9414341	.	-	0	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000178374.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-201"; exon_number 1; exon_id "ENSMUSE00001087364.1"; level 3; protein_id "ENSMUSP00000137027.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046164.1";
mm10-chrY	ENSEMBL	stop_codon	9413643	9413645	.	-	0	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000178374.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-201"; exon_number 1; exon_id "ENSMUSE00001087364.1"; level 3; protein_id "ENSMUSP00000137027.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046164.1";
mm10-chrY	ENSEMBL	UTR	9413643	9413645	.	-	.	gene_id "ENSMUSG00000096223.2"; transcript_id "ENSMUST00000178374.1"; gene_type "protein_coding"; gene_name "Gm21874"; transcript_type "protein_coding"; transcript_name "Gm21874-201"; exon_number 1; exon_id "ENSMUSE00001087364.1"; level 3; protein_id "ENSMUSP00000137027.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046164.1";
mm10-chrY	HAVANA	gene	9420765	9430932	.	-	.	gene_id "ENSMUSG00000101737.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28849"; level 2; havana_gene "OTTMUSG00000046165.1";
mm10-chrY	HAVANA	transcript	9420765	9430932	.	-	.	gene_id "ENSMUSG00000101737.1"; transcript_id "ENSMUST00000188127.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28849"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28849-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046165.1"; havana_transcript "OTTMUST00000120429.1";
mm10-chrY	HAVANA	exon	9430824	9430932	.	-	.	gene_id "ENSMUSG00000101737.1"; transcript_id "ENSMUST00000188127.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28849"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28849-201"; exon_number 1; exon_id "ENSMUSE00001325513.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046165.1"; havana_transcript "OTTMUST00000120429.1";
mm10-chrY	HAVANA	exon	9420765	9420829	.	-	.	gene_id "ENSMUSG00000101737.1"; transcript_id "ENSMUST00000188127.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28849"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28849-201"; exon_number 2; exon_id "ENSMUSE00001331895.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046165.1"; havana_transcript "OTTMUST00000120429.1";
mm10-chrY	HAVANA	gene	9451587	9452286	.	-	.	gene_id "ENSMUSG00000100752.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28847"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046166.1";
mm10-chrY	HAVANA	transcript	9451587	9452286	.	-	.	gene_id "ENSMUSG00000100752.1"; transcript_id "ENSMUST00000186778.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28847"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28847-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046166.1"; havana_transcript "OTTMUST00000120430.1";
mm10-chrY	HAVANA	exon	9451587	9452286	.	-	.	gene_id "ENSMUSG00000100752.1"; transcript_id "ENSMUST00000186778.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28847"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28847-201"; exon_number 1; exon_id "ENSMUSE00001326277.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046166.1"; havana_transcript "OTTMUST00000120430.1";
mm10-chrY	HAVANA	gene	9462449	9477366	.	-	.	gene_id "ENSMUSG00000100463.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28848"; level 2; havana_gene "OTTMUSG00000046167.1";
mm10-chrY	HAVANA	transcript	9462449	9477366	.	-	.	gene_id "ENSMUSG00000100463.1"; transcript_id "ENSMUST00000189984.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28848"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28848-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046167.1"; havana_transcript "OTTMUST00000120431.1";
mm10-chrY	HAVANA	exon	9477258	9477366	.	-	.	gene_id "ENSMUSG00000100463.1"; transcript_id "ENSMUST00000189984.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28848"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28848-201"; exon_number 1; exon_id "ENSMUSE00001332413.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046167.1"; havana_transcript "OTTMUST00000120431.1";
mm10-chrY	HAVANA	exon	9462449	9462507	.	-	.	gene_id "ENSMUSG00000100463.1"; transcript_id "ENSMUST00000189984.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28848"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28848-201"; exon_number 2; exon_id "ENSMUSE00001323850.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046167.1"; havana_transcript "OTTMUST00000120431.1";
mm10-chrY	HAVANA	gene	9494691	9495058	.	+	.	gene_id "ENSMUSG00000101977.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28846"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046168.1";
mm10-chrY	HAVANA	transcript	9494691	9495058	.	+	.	gene_id "ENSMUSG00000101977.1"; transcript_id "ENSMUST00000189161.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28846"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28846-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046168.1"; havana_transcript "OTTMUST00000120432.1";
mm10-chrY	HAVANA	exon	9494691	9495058	.	+	.	gene_id "ENSMUSG00000101977.1"; transcript_id "ENSMUST00000189161.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28846"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28846-201"; exon_number 1; exon_id "ENSMUSE00001335934.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046168.1"; havana_transcript "OTTMUST00000120432.1";
mm10-chrY	HAVANA	gene	9552436	9553135	.	+	.	gene_id "ENSMUSG00000100661.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29471"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046747.1";
mm10-chrY	HAVANA	transcript	9552436	9553135	.	+	.	gene_id "ENSMUSG00000100661.1"; transcript_id "ENSMUST00000190527.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29471"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29471-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046747.1"; havana_transcript "OTTMUST00000121378.1";
mm10-chrY	HAVANA	exon	9552436	9553135	.	+	.	gene_id "ENSMUSG00000100661.1"; transcript_id "ENSMUST00000190527.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29471"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29471-201"; exon_number 1; exon_id "ENSMUSE00001322002.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046747.1"; havana_transcript "OTTMUST00000121378.1";
mm10-chrY	HAVANA	gene	9609197	9609575	.	-	.	gene_id "ENSMUSG00000100571.1"; gene_type "processed_pseudogene"; gene_name "Gm29474"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046748.1";
mm10-chrY	HAVANA	transcript	9609197	9609575	.	-	.	gene_id "ENSMUSG00000100571.1"; transcript_id "ENSMUST00000187688.1"; gene_type "processed_pseudogene"; gene_name "Gm29474"; transcript_type "processed_pseudogene"; transcript_name "Gm29474-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046748.1"; havana_transcript "OTTMUST00000121379.1";
mm10-chrY	HAVANA	exon	9609197	9609575	.	-	.	gene_id "ENSMUSG00000100571.1"; transcript_id "ENSMUST00000187688.1"; gene_type "processed_pseudogene"; gene_name "Gm29474"; transcript_type "processed_pseudogene"; transcript_name "Gm29474-201"; exon_number 1; exon_id "ENSMUSE00001323049.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046748.1"; havana_transcript "OTTMUST00000121379.1";
mm10-chrY	HAVANA	gene	9707917	9726230	.	-	.	gene_id "ENSMUSG00000100087.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29475"; level 2; havana_gene "OTTMUSG00000046749.1";
mm10-chrY	HAVANA	transcript	9707917	9726230	.	-	.	gene_id "ENSMUSG00000100087.1"; transcript_id "ENSMUST00000190767.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29475"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29475-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046749.1"; havana_transcript "OTTMUST00000121380.1";
mm10-chrY	HAVANA	exon	9726122	9726230	.	-	.	gene_id "ENSMUSG00000100087.1"; transcript_id "ENSMUST00000190767.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29475"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29475-201"; exon_number 1; exon_id "ENSMUSE00001328773.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046749.1"; havana_transcript "OTTMUST00000121380.1";
mm10-chrY	HAVANA	exon	9716190	9716256	.	-	.	gene_id "ENSMUSG00000100087.1"; transcript_id "ENSMUST00000190767.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29475"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29475-201"; exon_number 2; exon_id "ENSMUSE00001322664.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046749.1"; havana_transcript "OTTMUST00000121380.1";
mm10-chrY	HAVANA	exon	9715613	9715647	.	-	.	gene_id "ENSMUSG00000100087.1"; transcript_id "ENSMUST00000190767.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29475"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29475-201"; exon_number 3; exon_id "ENSMUSE00001332020.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046749.1"; havana_transcript "OTTMUST00000121380.1";
mm10-chrY	HAVANA	exon	9708543	9708609	.	-	.	gene_id "ENSMUSG00000100087.1"; transcript_id "ENSMUST00000190767.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29475"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29475-201"; exon_number 4; exon_id "ENSMUSE00001334658.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046749.1"; havana_transcript "OTTMUST00000121380.1";
mm10-chrY	HAVANA	exon	9707917	9707950	.	-	.	gene_id "ENSMUSG00000100087.1"; transcript_id "ENSMUST00000190767.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29475"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29475-201"; exon_number 5; exon_id "ENSMUSE00001328445.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046749.1"; havana_transcript "OTTMUST00000121380.1";
mm10-chrY	HAVANA	gene	9781804	9784197	.	+	.	gene_id "ENSMUSG00000094556.2"; gene_type "protein_coding"; gene_name "Gm20821"; level 2; havana_gene "OTTMUSG00000046750.2";
mm10-chrY	HAVANA	transcript	9781804	9784197	.	+	.	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000179829.2"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-201"; level 2; protein_id "ENSMUSP00000136629.2"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2"; havana_transcript "OTTMUST00000121381.2";
mm10-chrY	HAVANA	exon	9781804	9781857	.	+	.	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000179829.2"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-201"; exon_number 1; exon_id "ENSMUSE00000916584.3"; level 2; protein_id "ENSMUSP00000136629.2"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2"; havana_transcript "OTTMUST00000121381.2";
mm10-chrY	HAVANA	exon	9783099	9784197	.	+	.	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000179829.2"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-201"; exon_number 2; exon_id "ENSMUSE00001004979.2"; level 2; protein_id "ENSMUSP00000136629.2"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2"; havana_transcript "OTTMUST00000121381.2";
mm10-chrY	HAVANA	CDS	9783380	9784060	.	+	0	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000179829.2"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-201"; exon_number 2; exon_id "ENSMUSE00001004979.2"; level 2; protein_id "ENSMUSP00000136629.2"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2"; havana_transcript "OTTMUST00000121381.2";
mm10-chrY	HAVANA	start_codon	9783380	9783382	.	+	0	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000179829.2"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-201"; exon_number 2; exon_id "ENSMUSE00001004979.2"; level 2; protein_id "ENSMUSP00000136629.2"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2"; havana_transcript "OTTMUST00000121381.2";
mm10-chrY	HAVANA	stop_codon	9784061	9784063	.	+	0	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000179829.2"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-201"; exon_number 2; exon_id "ENSMUSE00001004979.2"; level 2; protein_id "ENSMUSP00000136629.2"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2"; havana_transcript "OTTMUST00000121381.2";
mm10-chrY	HAVANA	UTR	9781804	9781857	.	+	.	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000179829.2"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-201"; exon_number 1; exon_id "ENSMUSE00000916584.3"; level 2; protein_id "ENSMUSP00000136629.2"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2"; havana_transcript "OTTMUST00000121381.2";
mm10-chrY	HAVANA	UTR	9783099	9783379	.	+	.	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000179829.2"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-201"; exon_number 2; exon_id "ENSMUSE00001004979.2"; level 2; protein_id "ENSMUSP00000136629.2"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2"; havana_transcript "OTTMUST00000121381.2";
mm10-chrY	HAVANA	UTR	9784061	9784197	.	+	.	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000179829.2"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-201"; exon_number 2; exon_id "ENSMUSE00001004979.2"; level 2; protein_id "ENSMUSP00000136629.2"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2"; havana_transcript "OTTMUST00000121381.2";
mm10-chrY	ENSEMBL	transcript	9783380	9784063	.	+	.	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000180352.1"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-202"; level 3; protein_id "ENSMUSP00000137322.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2";
mm10-chrY	ENSEMBL	exon	9783380	9784063	.	+	.	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000180352.1"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-202"; exon_number 1; exon_id "ENSMUSE00000982590.1"; level 3; protein_id "ENSMUSP00000137322.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2";
mm10-chrY	ENSEMBL	CDS	9783380	9784060	.	+	0	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000180352.1"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-202"; exon_number 1; exon_id "ENSMUSE00000982590.1"; level 3; protein_id "ENSMUSP00000137322.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2";
mm10-chrY	ENSEMBL	start_codon	9783380	9783382	.	+	0	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000180352.1"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-202"; exon_number 1; exon_id "ENSMUSE00000982590.1"; level 3; protein_id "ENSMUSP00000137322.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2";
mm10-chrY	ENSEMBL	stop_codon	9784061	9784063	.	+	0	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000180352.1"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-202"; exon_number 1; exon_id "ENSMUSE00000982590.1"; level 3; protein_id "ENSMUSP00000137322.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2";
mm10-chrY	ENSEMBL	UTR	9784061	9784063	.	+	.	gene_id "ENSMUSG00000094556.2"; transcript_id "ENSMUST00000180352.1"; gene_type "protein_coding"; gene_name "Gm20821"; transcript_type "protein_coding"; transcript_name "Gm20821-202"; exon_number 1; exon_id "ENSMUSE00000982590.1"; level 3; protein_id "ENSMUSP00000137322.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046750.2";
mm10-chrY	HAVANA	gene	9986127	9986276	.	-	.	gene_id "ENSMUSG00000100049.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28506"; level 2; havana_gene "OTTMUSG00000046751.1";
mm10-chrY	HAVANA	transcript	9986127	9986276	.	-	.	gene_id "ENSMUSG00000100049.1"; transcript_id "ENSMUST00000189937.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28506"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28506-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046751.1"; havana_transcript "OTTMUST00000121382.1";
mm10-chrY	HAVANA	exon	9986127	9986276	.	-	.	gene_id "ENSMUSG00000100049.1"; transcript_id "ENSMUST00000189937.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28506"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28506-201"; exon_number 1; exon_id "ENSMUSE00001321382.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046751.1"; havana_transcript "OTTMUST00000121382.1";
mm10-chrY	HAVANA	gene	10019064	10019766	.	-	.	gene_id "ENSMUSG00000100477.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28507"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046752.1";
mm10-chrY	HAVANA	transcript	10019064	10019766	.	-	.	gene_id "ENSMUSG00000100477.1"; transcript_id "ENSMUST00000189737.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28507"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28507-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046752.1"; havana_transcript "OTTMUST00000121383.1";
mm10-chrY	HAVANA	exon	10019064	10019766	.	-	.	gene_id "ENSMUSG00000100477.1"; transcript_id "ENSMUST00000189737.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28507"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28507-201"; exon_number 1; exon_id "ENSMUSE00001333543.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046752.1"; havana_transcript "OTTMUST00000121383.1";
mm10-chrY	HAVANA	gene	10065783	10066481	.	-	.	gene_id "ENSMUSG00000100800.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21301"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046753.1";
mm10-chrY	HAVANA	transcript	10065783	10066481	.	-	.	gene_id "ENSMUSG00000100800.1"; transcript_id "ENSMUST00000189476.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21301"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21301-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046753.1"; havana_transcript "OTTMUST00000121384.1";
mm10-chrY	HAVANA	exon	10065783	10066481	.	-	.	gene_id "ENSMUSG00000100800.1"; transcript_id "ENSMUST00000189476.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21301"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21301-201"; exon_number 1; exon_id "ENSMUSE00001322397.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046753.1"; havana_transcript "OTTMUST00000121384.1";
mm10-chrY	HAVANA	gene	10084919	10085614	.	-	.	gene_id "ENSMUSG00000099439.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29142"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046754.1";
mm10-chrY	HAVANA	transcript	10084919	10085614	.	-	.	gene_id "ENSMUSG00000099439.1"; transcript_id "ENSMUST00000188009.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29142"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29142-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046754.1"; havana_transcript "OTTMUST00000121385.1";
mm10-chrY	HAVANA	exon	10084919	10085614	.	-	.	gene_id "ENSMUSG00000099439.1"; transcript_id "ENSMUST00000188009.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29142"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29142-201"; exon_number 1; exon_id "ENSMUSE00001335825.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046754.1"; havana_transcript "OTTMUST00000121385.1";
mm10-chrY	HAVANA	gene	10144735	10147183	.	-	.	gene_id "ENSMUSG00000095032.2"; gene_type "protein_coding"; gene_name "Gm21310"; level 2; havana_gene "OTTMUSG00000046755.1";
mm10-chrY	HAVANA	transcript	10144735	10147183	.	-	.	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000189630.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-202"; level 2; protein_id "ENSMUSP00000139580.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1"; havana_transcript "OTTMUST00000121386.1";
mm10-chrY	HAVANA	exon	10146993	10147183	.	-	.	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000189630.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-202"; exon_number 1; exon_id "ENSMUSE00001319048.1"; level 2; protein_id "ENSMUSP00000139580.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1"; havana_transcript "OTTMUST00000121386.1";
mm10-chrY	HAVANA	exon	10146582	10146768	.	-	.	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000189630.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-202"; exon_number 2; exon_id "ENSMUSE00001328342.1"; level 2; protein_id "ENSMUSP00000139580.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1"; havana_transcript "OTTMUST00000121386.1";
mm10-chrY	HAVANA	exon	10144735	10145699	.	-	.	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000189630.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-202"; exon_number 3; exon_id "ENSMUSE00001325827.1"; level 2; protein_id "ENSMUSP00000139580.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1"; havana_transcript "OTTMUST00000121386.1";
mm10-chrY	HAVANA	CDS	10144864	10145559	.	-	0	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000189630.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-202"; exon_number 3; exon_id "ENSMUSE00001325827.1"; level 2; protein_id "ENSMUSP00000139580.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1"; havana_transcript "OTTMUST00000121386.1";
mm10-chrY	HAVANA	start_codon	10145557	10145559	.	-	0	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000189630.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-202"; exon_number 3; exon_id "ENSMUSE00001325827.1"; level 2; protein_id "ENSMUSP00000139580.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1"; havana_transcript "OTTMUST00000121386.1";
mm10-chrY	HAVANA	stop_codon	10144861	10144863	.	-	0	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000189630.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-202"; exon_number 3; exon_id "ENSMUSE00001325827.1"; level 2; protein_id "ENSMUSP00000139580.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1"; havana_transcript "OTTMUST00000121386.1";
mm10-chrY	HAVANA	UTR	10146993	10147183	.	-	.	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000189630.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-202"; exon_number 1; exon_id "ENSMUSE00001319048.1"; level 2; protein_id "ENSMUSP00000139580.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1"; havana_transcript "OTTMUST00000121386.1";
mm10-chrY	HAVANA	UTR	10146582	10146768	.	-	.	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000189630.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-202"; exon_number 2; exon_id "ENSMUSE00001328342.1"; level 2; protein_id "ENSMUSP00000139580.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1"; havana_transcript "OTTMUST00000121386.1";
mm10-chrY	HAVANA	UTR	10144735	10144863	.	-	.	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000189630.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-202"; exon_number 3; exon_id "ENSMUSE00001325827.1"; level 2; protein_id "ENSMUSP00000139580.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1"; havana_transcript "OTTMUST00000121386.1";
mm10-chrY	HAVANA	UTR	10145560	10145699	.	-	.	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000189630.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-202"; exon_number 3; exon_id "ENSMUSE00001325827.1"; level 2; protein_id "ENSMUSP00000139580.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1"; havana_transcript "OTTMUST00000121386.1";
mm10-chrY	ENSEMBL	transcript	10144861	10145559	.	-	.	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000180130.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-201"; level 3; protein_id "ENSMUSP00000137593.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1";
mm10-chrY	ENSEMBL	exon	10144861	10145559	.	-	.	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000180130.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-201"; exon_number 1; exon_id "ENSMUSE00001080353.1"; level 3; protein_id "ENSMUSP00000137593.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1";
mm10-chrY	ENSEMBL	CDS	10144864	10145559	.	-	0	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000180130.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-201"; exon_number 1; exon_id "ENSMUSE00001080353.1"; level 3; protein_id "ENSMUSP00000137593.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1";
mm10-chrY	ENSEMBL	start_codon	10145557	10145559	.	-	0	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000180130.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-201"; exon_number 1; exon_id "ENSMUSE00001080353.1"; level 3; protein_id "ENSMUSP00000137593.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1";
mm10-chrY	ENSEMBL	stop_codon	10144861	10144863	.	-	0	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000180130.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-201"; exon_number 1; exon_id "ENSMUSE00001080353.1"; level 3; protein_id "ENSMUSP00000137593.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1";
mm10-chrY	ENSEMBL	UTR	10144861	10144863	.	-	.	gene_id "ENSMUSG00000095032.2"; transcript_id "ENSMUST00000180130.1"; gene_type "protein_coding"; gene_name "Gm21310"; transcript_type "protein_coding"; transcript_name "Gm21310-201"; exon_number 1; exon_id "ENSMUSE00001080353.1"; level 3; protein_id "ENSMUSP00000137593.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046755.1";
mm10-chrY	HAVANA	gene	10151537	10154879	.	-	.	gene_id "ENSMUSG00000099372.1"; gene_type "lincRNA"; gene_name "Gm28509"; level 2; havana_gene "OTTMUSG00000046756.1";
mm10-chrY	HAVANA	transcript	10151537	10154879	.	-	.	gene_id "ENSMUSG00000099372.1"; transcript_id "ENSMUST00000189428.1"; gene_type "lincRNA"; gene_name "Gm28509"; transcript_type "lincRNA"; transcript_name "Gm28509-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046756.1"; havana_transcript "OTTMUST00000121387.1";
mm10-chrY	HAVANA	exon	10154658	10154879	.	-	.	gene_id "ENSMUSG00000099372.1"; transcript_id "ENSMUST00000189428.1"; gene_type "lincRNA"; gene_name "Gm28509"; transcript_type "lincRNA"; transcript_name "Gm28509-201"; exon_number 1; exon_id "ENSMUSE00001334794.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046756.1"; havana_transcript "OTTMUST00000121387.1";
mm10-chrY	HAVANA	exon	10151537	10153484	.	-	.	gene_id "ENSMUSG00000099372.1"; transcript_id "ENSMUST00000189428.1"; gene_type "lincRNA"; gene_name "Gm28509"; transcript_type "lincRNA"; transcript_name "Gm28509-201"; exon_number 2; exon_id "ENSMUSE00001322636.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046756.1"; havana_transcript "OTTMUST00000121387.1";
mm10-chrY	HAVANA	gene	10277698	10278393	.	-	.	gene_id "ENSMUSG00000101699.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28508"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046757.1";
mm10-chrY	HAVANA	transcript	10277698	10278393	.	-	.	gene_id "ENSMUSG00000101699.1"; transcript_id "ENSMUST00000188016.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28508"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28508-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046757.1"; havana_transcript "OTTMUST00000121388.1";
mm10-chrY	HAVANA	exon	10277698	10278393	.	-	.	gene_id "ENSMUSG00000101699.1"; transcript_id "ENSMUST00000188016.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28508"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28508-201"; exon_number 1; exon_id "ENSMUSE00001320827.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046757.1"; havana_transcript "OTTMUST00000121388.1";
mm10-chrY	HAVANA	gene	10322618	10324589	.	-	.	gene_id "ENSMUSG00000095242.2"; gene_type "protein_coding"; gene_name "Gm20834"; level 2; havana_gene "OTTMUSG00000046758.2";
mm10-chrY	HAVANA	transcript	10322618	10324589	.	-	.	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000185576.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-202"; level 2; protein_id "ENSMUSP00000140814.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2"; havana_transcript "OTTMUST00000121389.2";
mm10-chrY	HAVANA	exon	10324468	10324589	.	-	.	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000185576.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-202"; exon_number 1; exon_id "ENSMUSE00001319740.1"; level 2; protein_id "ENSMUSP00000140814.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2"; havana_transcript "OTTMUST00000121389.2";
mm10-chrY	HAVANA	exon	10322618	10323715	.	-	.	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000185576.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-202"; exon_number 2; exon_id "ENSMUSE00001330510.1"; level 2; protein_id "ENSMUSP00000140814.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2"; havana_transcript "OTTMUST00000121389.2";
mm10-chrY	HAVANA	CDS	10322754	10323434	.	-	0	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000185576.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-202"; exon_number 2; exon_id "ENSMUSE00001330510.1"; level 2; protein_id "ENSMUSP00000140814.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2"; havana_transcript "OTTMUST00000121389.2";
mm10-chrY	HAVANA	start_codon	10323432	10323434	.	-	0	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000185576.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-202"; exon_number 2; exon_id "ENSMUSE00001330510.1"; level 2; protein_id "ENSMUSP00000140814.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2"; havana_transcript "OTTMUST00000121389.2";
mm10-chrY	HAVANA	stop_codon	10322751	10322753	.	-	0	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000185576.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-202"; exon_number 2; exon_id "ENSMUSE00001330510.1"; level 2; protein_id "ENSMUSP00000140814.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2"; havana_transcript "OTTMUST00000121389.2";
mm10-chrY	HAVANA	UTR	10324468	10324589	.	-	.	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000185576.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-202"; exon_number 1; exon_id "ENSMUSE00001319740.1"; level 2; protein_id "ENSMUSP00000140814.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2"; havana_transcript "OTTMUST00000121389.2";
mm10-chrY	HAVANA	UTR	10322618	10322753	.	-	.	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000185576.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-202"; exon_number 2; exon_id "ENSMUSE00001330510.1"; level 2; protein_id "ENSMUSP00000140814.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2"; havana_transcript "OTTMUST00000121389.2";
mm10-chrY	HAVANA	UTR	10323435	10323715	.	-	.	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000185576.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-202"; exon_number 2; exon_id "ENSMUSE00001330510.1"; level 2; protein_id "ENSMUSP00000140814.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2"; havana_transcript "OTTMUST00000121389.2";
mm10-chrY	ENSEMBL	transcript	10322751	10323434	.	-	.	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000179558.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-201"; level 3; protein_id "ENSMUSP00000136150.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2";
mm10-chrY	ENSEMBL	exon	10322751	10323434	.	-	.	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000179558.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-201"; exon_number 1; exon_id "ENSMUSE00000995653.1"; level 3; protein_id "ENSMUSP00000136150.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2";
mm10-chrY	ENSEMBL	CDS	10322754	10323434	.	-	0	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000179558.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-201"; exon_number 1; exon_id "ENSMUSE00000995653.1"; level 3; protein_id "ENSMUSP00000136150.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2";
mm10-chrY	ENSEMBL	start_codon	10323432	10323434	.	-	0	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000179558.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-201"; exon_number 1; exon_id "ENSMUSE00000995653.1"; level 3; protein_id "ENSMUSP00000136150.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2";
mm10-chrY	ENSEMBL	stop_codon	10322751	10322753	.	-	0	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000179558.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-201"; exon_number 1; exon_id "ENSMUSE00000995653.1"; level 3; protein_id "ENSMUSP00000136150.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2";
mm10-chrY	ENSEMBL	UTR	10322751	10322753	.	-	.	gene_id "ENSMUSG00000095242.2"; transcript_id "ENSMUST00000179558.1"; gene_type "protein_coding"; gene_name "Gm20834"; transcript_type "protein_coding"; transcript_name "Gm20834-201"; exon_number 1; exon_id "ENSMUSE00000995653.1"; level 3; protein_id "ENSMUSP00000136150.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046758.2";
mm10-chrY	HAVANA	gene	10412737	10444691	.	+	.	gene_id "ENSMUSG00000101396.1"; gene_type "protein_coding"; gene_name "Gm28510"; level 2; havana_gene "OTTMUSG00000046759.1";
mm10-chrY	HAVANA	transcript	10412737	10444691	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	exon	10412737	10412780	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 1; exon_id "ENSMUSE00001323704.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	exon	10414165	10414296	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 2; exon_id "ENSMUSE00001328408.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	CDS	10414179	10414296	.	+	0	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 2; exon_id "ENSMUSE00001328408.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	start_codon	10414179	10414181	.	+	0	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 2; exon_id "ENSMUSE00001328408.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	exon	10425509	10425575	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 3; exon_id "ENSMUSE00001328904.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	CDS	10425509	10425575	.	+	2	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 3; exon_id "ENSMUSE00001328904.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	exon	10426125	10426159	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 4; exon_id "ENSMUSE00001330570.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	CDS	10426125	10426159	.	+	1	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 4; exon_id "ENSMUSE00001330570.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	exon	10433180	10433246	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 5; exon_id "ENSMUSE00001324188.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	CDS	10433180	10433246	.	+	2	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 5; exon_id "ENSMUSE00001324188.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	exon	10433831	10433865	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 6; exon_id "ENSMUSE00001327837.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	CDS	10433831	10433865	.	+	1	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 6; exon_id "ENSMUSE00001327837.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	exon	10441010	10441127	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 7; exon_id "ENSMUSE00001323655.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	CDS	10441010	10441127	.	+	2	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 7; exon_id "ENSMUSE00001323655.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	exon	10441881	10441980	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 8; exon_id "ENSMUSE00001319837.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	CDS	10441881	10441980	.	+	1	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 8; exon_id "ENSMUSE00001319837.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	exon	10444003	10444101	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 9; exon_id "ENSMUSE00001332341.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	CDS	10444003	10444101	.	+	0	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 9; exon_id "ENSMUSE00001332341.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	exon	10444461	10444691	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 10; exon_id "ENSMUSE00001320133.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	CDS	10444461	10444541	.	+	0	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 10; exon_id "ENSMUSE00001320133.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	stop_codon	10444542	10444544	.	+	0	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 10; exon_id "ENSMUSE00001320133.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	UTR	10412737	10412780	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 1; exon_id "ENSMUSE00001323704.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	UTR	10414165	10414178	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 2; exon_id "ENSMUSE00001328408.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	UTR	10444542	10444691	.	+	.	gene_id "ENSMUSG00000101396.1"; transcript_id "ENSMUST00000190572.1"; gene_type "protein_coding"; gene_name "Gm28510"; transcript_type "protein_coding"; transcript_name "Gm28510-201"; exon_number 10; exon_id "ENSMUSE00001320133.1"; level 2; protein_id "ENSMUSP00000139602.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046759.1"; havana_transcript "OTTMUST00000121390.1";
mm10-chrY	HAVANA	gene	10496820	10497518	.	-	.	gene_id "ENSMUSG00000100995.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29525"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046760.1";
mm10-chrY	HAVANA	transcript	10496820	10497518	.	-	.	gene_id "ENSMUSG00000100995.1"; transcript_id "ENSMUST00000189844.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29525"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29525-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046760.1"; havana_transcript "OTTMUST00000121391.1";
mm10-chrY	HAVANA	exon	10496820	10497518	.	-	.	gene_id "ENSMUSG00000100995.1"; transcript_id "ENSMUST00000189844.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29525"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29525-201"; exon_number 1; exon_id "ENSMUSE00001321684.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046760.1"; havana_transcript "OTTMUST00000121391.1";
mm10-chrY	HAVANA	gene	10510482	10510860	.	-	.	gene_id "ENSMUSG00000100273.1"; gene_type "processed_pseudogene"; gene_name "Gm29526"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046761.1";
mm10-chrY	HAVANA	transcript	10510482	10510860	.	-	.	gene_id "ENSMUSG00000100273.1"; transcript_id "ENSMUST00000187217.1"; gene_type "processed_pseudogene"; gene_name "Gm29526"; transcript_type "processed_pseudogene"; transcript_name "Gm29526-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046761.1"; havana_transcript "OTTMUST00000121392.1";
mm10-chrY	HAVANA	exon	10510482	10510860	.	-	.	gene_id "ENSMUSG00000100273.1"; transcript_id "ENSMUST00000187217.1"; gene_type "processed_pseudogene"; gene_name "Gm29526"; transcript_type "processed_pseudogene"; transcript_name "Gm29526-201"; exon_number 1; exon_id "ENSMUSE00001335248.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046761.1"; havana_transcript "OTTMUST00000121392.1";
mm10-chrY	HAVANA	gene	10533609	10536042	.	-	.	gene_id "ENSMUSG00000095950.2"; gene_type "protein_coding"; gene_name "Gm20737"; level 2; havana_gene "OTTMUSG00000046762.1";
mm10-chrY	HAVANA	transcript	10533609	10536042	.	-	.	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000187245.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-202"; level 2; protein_id "ENSMUSP00000139604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1"; havana_transcript "OTTMUST00000121393.1";
mm10-chrY	HAVANA	exon	10535852	10536042	.	-	.	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000187245.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-202"; exon_number 1; exon_id "ENSMUSE00001320908.1"; level 2; protein_id "ENSMUSP00000139604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1"; havana_transcript "OTTMUST00000121393.1";
mm10-chrY	HAVANA	exon	10535441	10535627	.	-	.	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000187245.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-202"; exon_number 2; exon_id "ENSMUSE00001330532.1"; level 2; protein_id "ENSMUSP00000139604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1"; havana_transcript "OTTMUST00000121393.1";
mm10-chrY	HAVANA	exon	10533609	10534568	.	-	.	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000187245.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-202"; exon_number 3; exon_id "ENSMUSE00001329619.1"; level 2; protein_id "ENSMUSP00000139604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1"; havana_transcript "OTTMUST00000121393.1";
mm10-chrY	HAVANA	CDS	10533733	10534428	.	-	0	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000187245.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-202"; exon_number 3; exon_id "ENSMUSE00001329619.1"; level 2; protein_id "ENSMUSP00000139604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1"; havana_transcript "OTTMUST00000121393.1";
mm10-chrY	HAVANA	start_codon	10534426	10534428	.	-	0	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000187245.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-202"; exon_number 3; exon_id "ENSMUSE00001329619.1"; level 2; protein_id "ENSMUSP00000139604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1"; havana_transcript "OTTMUST00000121393.1";
mm10-chrY	HAVANA	stop_codon	10533730	10533732	.	-	0	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000187245.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-202"; exon_number 3; exon_id "ENSMUSE00001329619.1"; level 2; protein_id "ENSMUSP00000139604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1"; havana_transcript "OTTMUST00000121393.1";
mm10-chrY	HAVANA	UTR	10535852	10536042	.	-	.	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000187245.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-202"; exon_number 1; exon_id "ENSMUSE00001320908.1"; level 2; protein_id "ENSMUSP00000139604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1"; havana_transcript "OTTMUST00000121393.1";
mm10-chrY	HAVANA	UTR	10535441	10535627	.	-	.	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000187245.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-202"; exon_number 2; exon_id "ENSMUSE00001330532.1"; level 2; protein_id "ENSMUSP00000139604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1"; havana_transcript "OTTMUST00000121393.1";
mm10-chrY	HAVANA	UTR	10533609	10533732	.	-	.	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000187245.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-202"; exon_number 3; exon_id "ENSMUSE00001329619.1"; level 2; protein_id "ENSMUSP00000139604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1"; havana_transcript "OTTMUST00000121393.1";
mm10-chrY	HAVANA	UTR	10534429	10534568	.	-	.	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000187245.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-202"; exon_number 3; exon_id "ENSMUSE00001329619.1"; level 2; protein_id "ENSMUSP00000139604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1"; havana_transcript "OTTMUST00000121393.1";
mm10-chrY	ENSEMBL	transcript	10533730	10534428	.	-	.	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000179665.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-201"; level 3; protein_id "ENSMUSP00000136272.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1";
mm10-chrY	ENSEMBL	exon	10533730	10534428	.	-	.	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000179665.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-201"; exon_number 1; exon_id "ENSMUSE00001011577.1"; level 3; protein_id "ENSMUSP00000136272.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1";
mm10-chrY	ENSEMBL	CDS	10533733	10534428	.	-	0	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000179665.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-201"; exon_number 1; exon_id "ENSMUSE00001011577.1"; level 3; protein_id "ENSMUSP00000136272.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1";
mm10-chrY	ENSEMBL	start_codon	10534426	10534428	.	-	0	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000179665.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-201"; exon_number 1; exon_id "ENSMUSE00001011577.1"; level 3; protein_id "ENSMUSP00000136272.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1";
mm10-chrY	ENSEMBL	stop_codon	10533730	10533732	.	-	0	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000179665.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-201"; exon_number 1; exon_id "ENSMUSE00001011577.1"; level 3; protein_id "ENSMUSP00000136272.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1";
mm10-chrY	ENSEMBL	UTR	10533730	10533732	.	-	.	gene_id "ENSMUSG00000095950.2"; transcript_id "ENSMUST00000179665.1"; gene_type "protein_coding"; gene_name "Gm20737"; transcript_type "protein_coding"; transcript_name "Gm20737-201"; exon_number 1; exon_id "ENSMUSE00001011577.1"; level 3; protein_id "ENSMUSP00000136272.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046762.1";
mm10-chrY	ENSEMBL	gene	10553453	10553992	.	+	.	gene_id "ENSMUSG00000095860.1"; gene_type "protein_coding"; gene_name "Gm21775"; level 3;
mm10-chrY	ENSEMBL	transcript	10553453	10553992	.	+	.	gene_id "ENSMUSG00000095860.1"; transcript_id "ENSMUST00000178669.1"; gene_type "protein_coding"; gene_name "Gm21775"; transcript_type "protein_coding"; transcript_name "Gm21775-201"; level 3; protein_id "ENSMUSP00000135909.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	10553453	10553992	.	+	.	gene_id "ENSMUSG00000095860.1"; transcript_id "ENSMUST00000178669.1"; gene_type "protein_coding"; gene_name "Gm21775"; transcript_type "protein_coding"; transcript_name "Gm21775-201"; exon_number 1; exon_id "ENSMUSE00001052738.1"; level 3; protein_id "ENSMUSP00000135909.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	10553453	10553992	.	+	0	gene_id "ENSMUSG00000095860.1"; transcript_id "ENSMUST00000178669.1"; gene_type "protein_coding"; gene_name "Gm21775"; transcript_type "protein_coding"; transcript_name "Gm21775-201"; exon_number 1; exon_id "ENSMUSE00001052738.1"; level 3; protein_id "ENSMUSP00000135909.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	10553453	10553455	.	+	0	gene_id "ENSMUSG00000095860.1"; transcript_id "ENSMUST00000178669.1"; gene_type "protein_coding"; gene_name "Gm21775"; transcript_type "protein_coding"; transcript_name "Gm21775-201"; exon_number 1; exon_id "ENSMUSE00001052738.1"; level 3; protein_id "ENSMUSP00000135909.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	gene	10616361	10616903	.	+	.	gene_id "ENSMUSG00000094867.1"; gene_type "protein_coding"; gene_name "Gm21900"; level 3;
mm10-chrY	ENSEMBL	transcript	10616361	10616903	.	+	.	gene_id "ENSMUSG00000094867.1"; transcript_id "ENSMUST00000179612.1"; gene_type "protein_coding"; gene_name "Gm21900"; transcript_type "protein_coding"; transcript_name "Gm21900-201"; level 3; protein_id "ENSMUSP00000137084.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	10616361	10616903	.	+	.	gene_id "ENSMUSG00000094867.1"; transcript_id "ENSMUST00000179612.1"; gene_type "protein_coding"; gene_name "Gm21900"; transcript_type "protein_coding"; transcript_name "Gm21900-201"; exon_number 1; exon_id "ENSMUSE00001077407.1"; level 3; protein_id "ENSMUSP00000137084.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	10616361	10616900	.	+	0	gene_id "ENSMUSG00000094867.1"; transcript_id "ENSMUST00000179612.1"; gene_type "protein_coding"; gene_name "Gm21900"; transcript_type "protein_coding"; transcript_name "Gm21900-201"; exon_number 1; exon_id "ENSMUSE00001077407.1"; level 3; protein_id "ENSMUSP00000137084.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	10616361	10616363	.	+	0	gene_id "ENSMUSG00000094867.1"; transcript_id "ENSMUST00000179612.1"; gene_type "protein_coding"; gene_name "Gm21900"; transcript_type "protein_coding"; transcript_name "Gm21900-201"; exon_number 1; exon_id "ENSMUSE00001077407.1"; level 3; protein_id "ENSMUSP00000137084.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	10616901	10616903	.	+	0	gene_id "ENSMUSG00000094867.1"; transcript_id "ENSMUST00000179612.1"; gene_type "protein_coding"; gene_name "Gm21900"; transcript_type "protein_coding"; transcript_name "Gm21900-201"; exon_number 1; exon_id "ENSMUSE00001077407.1"; level 3; protein_id "ENSMUSP00000137084.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	10616901	10616903	.	+	.	gene_id "ENSMUSG00000094867.1"; transcript_id "ENSMUST00000179612.1"; gene_type "protein_coding"; gene_name "Gm21900"; transcript_type "protein_coding"; transcript_name "Gm21900-201"; exon_number 1; exon_id "ENSMUSE00001077407.1"; level 3; protein_id "ENSMUSP00000137084.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	10626743	10629110	.	+	.	gene_id "ENSMUSG00000100369.1"; gene_type "lincRNA"; gene_name "Gm29527"; level 2; havana_gene "OTTMUSG00000046763.1";
mm10-chrY	HAVANA	transcript	10626743	10629110	.	+	.	gene_id "ENSMUSG00000100369.1"; transcript_id "ENSMUST00000190722.1"; gene_type "lincRNA"; gene_name "Gm29527"; transcript_type "lincRNA"; transcript_name "Gm29527-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046763.1"; havana_transcript "OTTMUST00000121394.1";
mm10-chrY	HAVANA	exon	10626743	10626929	.	+	.	gene_id "ENSMUSG00000100369.1"; transcript_id "ENSMUST00000190722.1"; gene_type "lincRNA"; gene_name "Gm29527"; transcript_type "lincRNA"; transcript_name "Gm29527-201"; exon_number 1; exon_id "ENSMUSE00001318233.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046763.1"; havana_transcript "OTTMUST00000121394.1";
mm10-chrY	HAVANA	exon	10627419	10627600	.	+	.	gene_id "ENSMUSG00000100369.1"; transcript_id "ENSMUST00000190722.1"; gene_type "lincRNA"; gene_name "Gm29527"; transcript_type "lincRNA"; transcript_name "Gm29527-201"; exon_number 2; exon_id "ENSMUSE00001328188.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046763.1"; havana_transcript "OTTMUST00000121394.1";
mm10-chrY	HAVANA	exon	10628330	10628513	.	+	.	gene_id "ENSMUSG00000100369.1"; transcript_id "ENSMUST00000190722.1"; gene_type "lincRNA"; gene_name "Gm29527"; transcript_type "lincRNA"; transcript_name "Gm29527-201"; exon_number 3; exon_id "ENSMUSE00001331240.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046763.1"; havana_transcript "OTTMUST00000121394.1";
mm10-chrY	HAVANA	exon	10629042	10629110	.	+	.	gene_id "ENSMUSG00000100369.1"; transcript_id "ENSMUST00000190722.1"; gene_type "lincRNA"; gene_name "Gm29527"; transcript_type "lincRNA"; transcript_name "Gm29527-201"; exon_number 4; exon_id "ENSMUSE00001331299.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046763.1"; havana_transcript "OTTMUST00000121394.1";
mm10-chrY	HAVANA	gene	10641257	10643107	.	-	.	gene_id "ENSMUSG00000075359.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20775"; level 2; havana_gene "OTTMUSG00000046764.1";
mm10-chrY	HAVANA	transcript	10641257	10643107	.	-	.	gene_id "ENSMUSG00000075359.2"; transcript_id "ENSMUST00000100115.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20775"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20775-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046764.1"; havana_transcript "OTTMUST00000121395.1";
mm10-chrY	HAVANA	exon	10641257	10643107	.	-	.	gene_id "ENSMUSG00000075359.2"; transcript_id "ENSMUST00000100115.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20775"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20775-201"; exon_number 1; exon_id "ENSMUSE00000645388.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046764.1"; havana_transcript "OTTMUST00000121395.1";
mm10-chrY	HAVANA	gene	10658332	10660695	.	+	.	gene_id "ENSMUSG00000099668.1"; gene_type "lincRNA"; gene_name "Gm29522"; level 2; havana_gene "OTTMUSG00000046765.1";
mm10-chrY	HAVANA	transcript	10658332	10660695	.	+	.	gene_id "ENSMUSG00000099668.1"; transcript_id "ENSMUST00000191530.1"; gene_type "lincRNA"; gene_name "Gm29522"; transcript_type "lincRNA"; transcript_name "Gm29522-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046765.1"; havana_transcript "OTTMUST00000121396.1";
mm10-chrY	HAVANA	exon	10658332	10658517	.	+	.	gene_id "ENSMUSG00000099668.1"; transcript_id "ENSMUST00000191530.1"; gene_type "lincRNA"; gene_name "Gm29522"; transcript_type "lincRNA"; transcript_name "Gm29522-201"; exon_number 1; exon_id "ENSMUSE00001329214.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046765.1"; havana_transcript "OTTMUST00000121396.1";
mm10-chrY	HAVANA	exon	10659007	10659188	.	+	.	gene_id "ENSMUSG00000099668.1"; transcript_id "ENSMUST00000191530.1"; gene_type "lincRNA"; gene_name "Gm29522"; transcript_type "lincRNA"; transcript_name "Gm29522-201"; exon_number 2; exon_id "ENSMUSE00001321686.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046765.1"; havana_transcript "OTTMUST00000121396.1";
mm10-chrY	HAVANA	exon	10659915	10660098	.	+	.	gene_id "ENSMUSG00000099668.1"; transcript_id "ENSMUST00000191530.1"; gene_type "lincRNA"; gene_name "Gm29522"; transcript_type "lincRNA"; transcript_name "Gm29522-201"; exon_number 3; exon_id "ENSMUSE00001333141.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046765.1"; havana_transcript "OTTMUST00000121396.1";
mm10-chrY	HAVANA	exon	10660627	10660695	.	+	.	gene_id "ENSMUSG00000099668.1"; transcript_id "ENSMUST00000191530.1"; gene_type "lincRNA"; gene_name "Gm29522"; transcript_type "lincRNA"; transcript_name "Gm29522-201"; exon_number 4; exon_id "ENSMUSE00001327814.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046765.1"; havana_transcript "OTTMUST00000121396.1";
mm10-chrY	HAVANA	gene	10678430	10679128	.	-	.	gene_id "ENSMUSG00000100731.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29523"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046766.1";
mm10-chrY	HAVANA	transcript	10678430	10679128	.	-	.	gene_id "ENSMUSG00000100731.1"; transcript_id "ENSMUST00000191415.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29523"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29523-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046766.1"; havana_transcript "OTTMUST00000121397.1";
mm10-chrY	HAVANA	exon	10678430	10679128	.	-	.	gene_id "ENSMUSG00000100731.1"; transcript_id "ENSMUST00000191415.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29523"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29523-201"; exon_number 1; exon_id "ENSMUSE00001328352.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046766.1"; havana_transcript "OTTMUST00000121397.1";
mm10-chrY	HAVANA	gene	10713102	10713800	.	-	.	gene_id "ENSMUSG00000100074.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29524"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046767.1";
mm10-chrY	HAVANA	transcript	10713102	10713800	.	-	.	gene_id "ENSMUSG00000100074.1"; transcript_id "ENSMUST00000190819.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29524"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29524-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046767.1"; havana_transcript "OTTMUST00000121398.1";
mm10-chrY	HAVANA	exon	10713102	10713800	.	-	.	gene_id "ENSMUSG00000100074.1"; transcript_id "ENSMUST00000190819.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29524"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29524-201"; exon_number 1; exon_id "ENSMUSE00001319701.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046767.1"; havana_transcript "OTTMUST00000121398.1";
mm10-chrY	HAVANA	gene	10726740	10727118	.	-	.	gene_id "ENSMUSG00000099676.1"; gene_type "processed_pseudogene"; gene_name "Gm29528"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046768.1";
mm10-chrY	HAVANA	transcript	10726740	10727118	.	-	.	gene_id "ENSMUSG00000099676.1"; transcript_id "ENSMUST00000186699.1"; gene_type "processed_pseudogene"; gene_name "Gm29528"; transcript_type "processed_pseudogene"; transcript_name "Gm29528-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046768.1"; havana_transcript "OTTMUST00000121399.1";
mm10-chrY	HAVANA	exon	10726740	10727118	.	-	.	gene_id "ENSMUSG00000099676.1"; transcript_id "ENSMUST00000186699.1"; gene_type "processed_pseudogene"; gene_name "Gm29528"; transcript_type "processed_pseudogene"; transcript_name "Gm29528-201"; exon_number 1; exon_id "ENSMUSE00001334005.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046768.1"; havana_transcript "OTTMUST00000121399.1";
mm10-chrY	HAVANA	gene	10750004	10752450	.	-	.	gene_id "ENSMUSG00000094813.2"; gene_type "protein_coding"; gene_name "Gm20777"; level 2; havana_gene "OTTMUSG00000046769.1";
mm10-chrY	HAVANA	transcript	10750004	10752450	.	-	.	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000187434.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-202"; level 2; protein_id "ENSMUSP00000140872.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1"; havana_transcript "OTTMUST00000121400.1";
mm10-chrY	HAVANA	exon	10752260	10752450	.	-	.	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000187434.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-202"; exon_number 1; exon_id "ENSMUSE00001318350.1"; level 2; protein_id "ENSMUSP00000140872.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1"; havana_transcript "OTTMUST00000121400.1";
mm10-chrY	HAVANA	exon	10751849	10752035	.	-	.	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000187434.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-202"; exon_number 2; exon_id "ENSMUSE00001322414.1"; level 2; protein_id "ENSMUSP00000140872.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1"; havana_transcript "OTTMUST00000121400.1";
mm10-chrY	HAVANA	exon	10750004	10750966	.	-	.	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000187434.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-202"; exon_number 3; exon_id "ENSMUSE00001335418.1"; level 2; protein_id "ENSMUSP00000140872.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1"; havana_transcript "OTTMUST00000121400.1";
mm10-chrY	HAVANA	CDS	10750131	10750826	.	-	0	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000187434.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-202"; exon_number 3; exon_id "ENSMUSE00001335418.1"; level 2; protein_id "ENSMUSP00000140872.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1"; havana_transcript "OTTMUST00000121400.1";
mm10-chrY	HAVANA	start_codon	10750824	10750826	.	-	0	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000187434.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-202"; exon_number 3; exon_id "ENSMUSE00001335418.1"; level 2; protein_id "ENSMUSP00000140872.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1"; havana_transcript "OTTMUST00000121400.1";
mm10-chrY	HAVANA	stop_codon	10750128	10750130	.	-	0	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000187434.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-202"; exon_number 3; exon_id "ENSMUSE00001335418.1"; level 2; protein_id "ENSMUSP00000140872.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1"; havana_transcript "OTTMUST00000121400.1";
mm10-chrY	HAVANA	UTR	10752260	10752450	.	-	.	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000187434.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-202"; exon_number 1; exon_id "ENSMUSE00001318350.1"; level 2; protein_id "ENSMUSP00000140872.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1"; havana_transcript "OTTMUST00000121400.1";
mm10-chrY	HAVANA	UTR	10751849	10752035	.	-	.	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000187434.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-202"; exon_number 2; exon_id "ENSMUSE00001322414.1"; level 2; protein_id "ENSMUSP00000140872.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1"; havana_transcript "OTTMUST00000121400.1";
mm10-chrY	HAVANA	UTR	10750004	10750130	.	-	.	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000187434.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-202"; exon_number 3; exon_id "ENSMUSE00001335418.1"; level 2; protein_id "ENSMUSP00000140872.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1"; havana_transcript "OTTMUST00000121400.1";
mm10-chrY	HAVANA	UTR	10750827	10750966	.	-	.	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000187434.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-202"; exon_number 3; exon_id "ENSMUSE00001335418.1"; level 2; protein_id "ENSMUSP00000140872.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1"; havana_transcript "OTTMUST00000121400.1";
mm10-chrY	ENSEMBL	transcript	10750128	10750826	.	-	.	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000177818.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-201"; level 3; protein_id "ENSMUSP00000136036.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1";
mm10-chrY	ENSEMBL	exon	10750128	10750826	.	-	.	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000177818.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-201"; exon_number 1; exon_id "ENSMUSE00001038664.1"; level 3; protein_id "ENSMUSP00000136036.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1";
mm10-chrY	ENSEMBL	CDS	10750131	10750826	.	-	0	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000177818.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-201"; exon_number 1; exon_id "ENSMUSE00001038664.1"; level 3; protein_id "ENSMUSP00000136036.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1";
mm10-chrY	ENSEMBL	start_codon	10750824	10750826	.	-	0	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000177818.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-201"; exon_number 1; exon_id "ENSMUSE00001038664.1"; level 3; protein_id "ENSMUSP00000136036.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1";
mm10-chrY	ENSEMBL	stop_codon	10750128	10750130	.	-	0	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000177818.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-201"; exon_number 1; exon_id "ENSMUSE00001038664.1"; level 3; protein_id "ENSMUSP00000136036.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1";
mm10-chrY	ENSEMBL	UTR	10750128	10750130	.	-	.	gene_id "ENSMUSG00000094813.2"; transcript_id "ENSMUST00000177818.1"; gene_type "protein_coding"; gene_name "Gm20777"; transcript_type "protein_coding"; transcript_name "Gm20777-201"; exon_number 1; exon_id "ENSMUSE00001038664.1"; level 3; protein_id "ENSMUSP00000136036.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046769.1";
mm10-chrY	HAVANA	gene	10756787	10760126	.	-	.	gene_id "ENSMUSG00000099482.1"; gene_type "lincRNA"; gene_name "Gm28955"; level 2; havana_gene "OTTMUSG00000046770.1";
mm10-chrY	HAVANA	transcript	10756787	10760126	.	-	.	gene_id "ENSMUSG00000099482.1"; transcript_id "ENSMUST00000188167.1"; gene_type "lincRNA"; gene_name "Gm28955"; transcript_type "lincRNA"; transcript_name "Gm28955-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046770.1"; havana_transcript "OTTMUST00000121401.1";
mm10-chrY	HAVANA	exon	10759905	10760126	.	-	.	gene_id "ENSMUSG00000099482.1"; transcript_id "ENSMUST00000188167.1"; gene_type "lincRNA"; gene_name "Gm28955"; transcript_type "lincRNA"; transcript_name "Gm28955-201"; exon_number 1; exon_id "ENSMUSE00001335452.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046770.1"; havana_transcript "OTTMUST00000121401.1";
mm10-chrY	HAVANA	exon	10756787	10758730	.	-	.	gene_id "ENSMUSG00000099482.1"; transcript_id "ENSMUST00000188167.1"; gene_type "lincRNA"; gene_name "Gm28955"; transcript_type "lincRNA"; transcript_name "Gm28955-201"; exon_number 2; exon_id "ENSMUSE00001326988.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046770.1"; havana_transcript "OTTMUST00000121401.1";
mm10-chrY	HAVANA	gene	10806574	10808312	.	+	.	gene_id "ENSMUSG00000099776.1"; gene_type "lincRNA"; gene_name "Gm28954"; level 2; havana_gene "OTTMUSG00000046771.1";
mm10-chrY	HAVANA	transcript	10806574	10808312	.	+	.	gene_id "ENSMUSG00000099776.1"; transcript_id "ENSMUST00000190031.1"; gene_type "lincRNA"; gene_name "Gm28954"; transcript_type "lincRNA"; transcript_name "Gm28954-201"; level 2; transcript_support_level "5"; tag "not_organism_supported"; tag "basic"; havana_gene "OTTMUSG00000046771.1"; havana_transcript "OTTMUST00000121402.1";
mm10-chrY	HAVANA	exon	10806574	10806759	.	+	.	gene_id "ENSMUSG00000099776.1"; transcript_id "ENSMUST00000190031.1"; gene_type "lincRNA"; gene_name "Gm28954"; transcript_type "lincRNA"; transcript_name "Gm28954-201"; exon_number 1; exon_id "ENSMUSE00001324240.1"; level 2; transcript_support_level "5"; tag "not_organism_supported"; tag "basic"; havana_gene "OTTMUSG00000046771.1"; havana_transcript "OTTMUST00000121402.1";
mm10-chrY	HAVANA	exon	10807249	10807430	.	+	.	gene_id "ENSMUSG00000099776.1"; transcript_id "ENSMUST00000190031.1"; gene_type "lincRNA"; gene_name "Gm28954"; transcript_type "lincRNA"; transcript_name "Gm28954-201"; exon_number 2; exon_id "ENSMUSE00001318333.1"; level 2; transcript_support_level "5"; tag "not_organism_supported"; tag "basic"; havana_gene "OTTMUSG00000046771.1"; havana_transcript "OTTMUST00000121402.1";
mm10-chrY	HAVANA	exon	10808244	10808312	.	+	.	gene_id "ENSMUSG00000099776.1"; transcript_id "ENSMUST00000190031.1"; gene_type "lincRNA"; gene_name "Gm28954"; transcript_type "lincRNA"; transcript_name "Gm28954-201"; exon_number 3; exon_id "ENSMUSE00001332730.1"; level 2; transcript_support_level "5"; tag "not_organism_supported"; tag "basic"; havana_gene "OTTMUSG00000046771.1"; havana_transcript "OTTMUST00000121402.1";
mm10-chrY	HAVANA	gene	10885361	10886057	.	-	.	gene_id "ENSMUSG00000100742.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28953"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046772.2";
mm10-chrY	HAVANA	transcript	10885361	10886057	.	-	.	gene_id "ENSMUSG00000100742.1"; transcript_id "ENSMUST00000188336.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28953"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28953-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046772.2"; havana_transcript "OTTMUST00000121403.2";
mm10-chrY	HAVANA	exon	10885361	10886057	.	-	.	gene_id "ENSMUSG00000100742.1"; transcript_id "ENSMUST00000188336.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28953"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28953-201"; exon_number 1; exon_id "ENSMUSE00001335124.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046772.2"; havana_transcript "OTTMUST00000121403.2";
mm10-chrY	HAVANA	gene	10930578	10931277	.	-	.	gene_id "ENSMUSG00000100730.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20776"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046773.1";
mm10-chrY	HAVANA	transcript	10930578	10931277	.	-	.	gene_id "ENSMUSG00000100730.1"; transcript_id "ENSMUST00000189940.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20776"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20776-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046773.1"; havana_transcript "OTTMUST00000121404.1";
mm10-chrY	HAVANA	exon	10930578	10931277	.	-	.	gene_id "ENSMUSG00000100730.1"; transcript_id "ENSMUST00000189940.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20776"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20776-201"; exon_number 1; exon_id "ENSMUSE00001328626.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046773.1"; havana_transcript "OTTMUST00000121404.1";
mm10-chrY	HAVANA	gene	11010496	11011198	.	-	.	gene_id "ENSMUSG00000100567.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28958"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046774.1";
mm10-chrY	HAVANA	transcript	11010496	11011198	.	-	.	gene_id "ENSMUSG00000100567.1"; transcript_id "ENSMUST00000185864.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28958"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28958-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046774.1"; havana_transcript "OTTMUST00000121405.1";
mm10-chrY	HAVANA	exon	11010496	11011198	.	-	.	gene_id "ENSMUSG00000100567.1"; transcript_id "ENSMUST00000185864.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28958"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28958-201"; exon_number 1; exon_id "ENSMUSE00001318072.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046774.1"; havana_transcript "OTTMUST00000121405.1";
mm10-chrY	HAVANA	gene	11197024	11199374	.	-	.	gene_id "ENSMUSG00000094838.2"; gene_type "protein_coding"; gene_name "Gm20828"; level 2; havana_gene "OTTMUSG00000046775.1";
mm10-chrY	HAVANA	transcript	11197024	11199374	.	-	.	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000190516.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-202"; level 2; protein_id "ENSMUSP00000139764.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1"; havana_transcript "OTTMUST00000121406.1";
mm10-chrY	HAVANA	exon	11199252	11199374	.	-	.	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000190516.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-202"; exon_number 1; exon_id "ENSMUSE00001328476.1"; level 2; protein_id "ENSMUSP00000139764.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1"; havana_transcript "OTTMUST00000121406.1";
mm10-chrY	HAVANA	exon	11197024	11198129	.	-	.	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000190516.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-202"; exon_number 2; exon_id "ENSMUSE00001333330.1"; level 2; protein_id "ENSMUSP00000139764.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1"; havana_transcript "OTTMUST00000121406.1";
mm10-chrY	HAVANA	CDS	11197165	11197848	.	-	0	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000190516.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-202"; exon_number 2; exon_id "ENSMUSE00001333330.1"; level 2; protein_id "ENSMUSP00000139764.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1"; havana_transcript "OTTMUST00000121406.1";
mm10-chrY	HAVANA	start_codon	11197846	11197848	.	-	0	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000190516.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-202"; exon_number 2; exon_id "ENSMUSE00001333330.1"; level 2; protein_id "ENSMUSP00000139764.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1"; havana_transcript "OTTMUST00000121406.1";
mm10-chrY	HAVANA	stop_codon	11197162	11197164	.	-	0	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000190516.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-202"; exon_number 2; exon_id "ENSMUSE00001333330.1"; level 2; protein_id "ENSMUSP00000139764.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1"; havana_transcript "OTTMUST00000121406.1";
mm10-chrY	HAVANA	UTR	11199252	11199374	.	-	.	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000190516.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-202"; exon_number 1; exon_id "ENSMUSE00001328476.1"; level 2; protein_id "ENSMUSP00000139764.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1"; havana_transcript "OTTMUST00000121406.1";
mm10-chrY	HAVANA	UTR	11197024	11197164	.	-	.	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000190516.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-202"; exon_number 2; exon_id "ENSMUSE00001333330.1"; level 2; protein_id "ENSMUSP00000139764.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1"; havana_transcript "OTTMUST00000121406.1";
mm10-chrY	HAVANA	UTR	11197849	11198129	.	-	.	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000190516.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-202"; exon_number 2; exon_id "ENSMUSE00001333330.1"; level 2; protein_id "ENSMUSP00000139764.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1"; havana_transcript "OTTMUST00000121406.1";
mm10-chrY	ENSEMBL	transcript	11197162	11197848	.	-	.	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000170889.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-201"; level 3; protein_id "ENSMUSP00000129237.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1";
mm10-chrY	ENSEMBL	exon	11197162	11197848	.	-	.	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000170889.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-201"; exon_number 1; exon_id "ENSMUSE00001065841.1"; level 3; protein_id "ENSMUSP00000129237.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1";
mm10-chrY	ENSEMBL	CDS	11197165	11197848	.	-	0	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000170889.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-201"; exon_number 1; exon_id "ENSMUSE00001065841.1"; level 3; protein_id "ENSMUSP00000129237.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1";
mm10-chrY	ENSEMBL	start_codon	11197846	11197848	.	-	0	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000170889.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-201"; exon_number 1; exon_id "ENSMUSE00001065841.1"; level 3; protein_id "ENSMUSP00000129237.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1";
mm10-chrY	ENSEMBL	stop_codon	11197162	11197164	.	-	0	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000170889.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-201"; exon_number 1; exon_id "ENSMUSE00001065841.1"; level 3; protein_id "ENSMUSP00000129237.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1";
mm10-chrY	ENSEMBL	UTR	11197162	11197164	.	-	.	gene_id "ENSMUSG00000094838.2"; transcript_id "ENSMUST00000170889.1"; gene_type "protein_coding"; gene_name "Gm20828"; transcript_type "protein_coding"; transcript_name "Gm20828-201"; exon_number 1; exon_id "ENSMUSE00001065841.1"; level 3; protein_id "ENSMUSP00000129237.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046775.1";
mm10-chrY	HAVANA	gene	11251236	11251608	.	-	.	gene_id "ENSMUSG00000101319.1"; gene_type "processed_pseudogene"; gene_name "Gm28957"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046776.1";
mm10-chrY	HAVANA	transcript	11251236	11251608	.	-	.	gene_id "ENSMUSG00000101319.1"; transcript_id "ENSMUST00000190174.1"; gene_type "processed_pseudogene"; gene_name "Gm28957"; transcript_type "processed_pseudogene"; transcript_name "Gm28957-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046776.1"; havana_transcript "OTTMUST00000121407.1";
mm10-chrY	HAVANA	exon	11251236	11251608	.	-	.	gene_id "ENSMUSG00000101319.1"; transcript_id "ENSMUST00000190174.1"; gene_type "processed_pseudogene"; gene_name "Gm28957"; transcript_type "processed_pseudogene"; transcript_name "Gm28957-201"; exon_number 1; exon_id "ENSMUSE00001326618.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046776.1"; havana_transcript "OTTMUST00000121407.1";
mm10-chrY	HAVANA	gene	11345842	11426704	.	-	.	gene_id "ENSMUSG00000101789.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28956"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046777.1";
mm10-chrY	HAVANA	transcript	11345842	11426704	.	-	.	gene_id "ENSMUSG00000101789.1"; transcript_id "ENSMUST00000189047.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28956"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28956-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046777.1"; havana_transcript "OTTMUST00000121408.1";
mm10-chrY	HAVANA	exon	11426573	11426704	.	-	.	gene_id "ENSMUSG00000101789.1"; transcript_id "ENSMUST00000189047.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28956"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28956-201"; exon_number 1; exon_id "ENSMUSE00001320018.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046777.1"; havana_transcript "OTTMUST00000121408.1";
mm10-chrY	HAVANA	exon	11415689	11415755	.	-	.	gene_id "ENSMUSG00000101789.1"; transcript_id "ENSMUST00000189047.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28956"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28956-201"; exon_number 2; exon_id "ENSMUSE00001329412.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046777.1"; havana_transcript "OTTMUST00000121408.1";
mm10-chrY	HAVANA	exon	11407928	11408120	.	-	.	gene_id "ENSMUSG00000101789.1"; transcript_id "ENSMUST00000189047.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28956"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28956-201"; exon_number 3; exon_id "ENSMUSE00001327418.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046777.1"; havana_transcript "OTTMUST00000121408.1";
mm10-chrY	HAVANA	exon	11345842	11345876	.	-	.	gene_id "ENSMUSG00000101789.1"; transcript_id "ENSMUST00000189047.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28956"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28956-201"; exon_number 4; exon_id "ENSMUSE00001333299.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046777.1"; havana_transcript "OTTMUST00000121408.1";
mm10-chrY	HAVANA	gene	11465876	11466556	.	+	.	gene_id "ENSMUSG00000100015.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28952"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046778.1";
mm10-chrY	HAVANA	transcript	11465876	11466556	.	+	.	gene_id "ENSMUSG00000100015.1"; transcript_id "ENSMUST00000189285.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28952"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28952-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046778.1"; havana_transcript "OTTMUST00000121409.1";
mm10-chrY	HAVANA	exon	11465876	11466556	.	+	.	gene_id "ENSMUSG00000100015.1"; transcript_id "ENSMUST00000189285.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28952"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28952-201"; exon_number 1; exon_id "ENSMUSE00001333218.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046778.1"; havana_transcript "OTTMUST00000121409.1";
mm10-chrY	HAVANA	gene	11681696	11708109	.	+	.	gene_id "ENSMUSG00000099572.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28951"; level 2; havana_gene "OTTMUSG00000046779.1";
mm10-chrY	HAVANA	transcript	11681696	11708109	.	+	.	gene_id "ENSMUSG00000099572.1"; transcript_id "ENSMUST00000190742.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28951"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28951-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046779.1"; havana_transcript "OTTMUST00000121410.1";
mm10-chrY	HAVANA	exon	11681696	11681804	.	+	.	gene_id "ENSMUSG00000099572.1"; transcript_id "ENSMUST00000190742.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28951"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28951-201"; exon_number 1; exon_id "ENSMUSE00001328123.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046779.1"; havana_transcript "OTTMUST00000121410.1";
mm10-chrY	HAVANA	exon	11699281	11699347	.	+	.	gene_id "ENSMUSG00000099572.1"; transcript_id "ENSMUST00000190742.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28951"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28951-201"; exon_number 2; exon_id "ENSMUSE00001334583.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046779.1"; havana_transcript "OTTMUST00000121410.1";
mm10-chrY	HAVANA	exon	11699889	11699923	.	+	.	gene_id "ENSMUSG00000099572.1"; transcript_id "ENSMUST00000190742.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28951"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28951-201"; exon_number 3; exon_id "ENSMUSE00001322378.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046779.1"; havana_transcript "OTTMUST00000121410.1";
mm10-chrY	HAVANA	exon	11707443	11707509	.	+	.	gene_id "ENSMUSG00000099572.1"; transcript_id "ENSMUST00000190742.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28951"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28951-201"; exon_number 4; exon_id "ENSMUSE00001332248.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046779.1"; havana_transcript "OTTMUST00000121410.1";
mm10-chrY	HAVANA	exon	11708075	11708109	.	+	.	gene_id "ENSMUSG00000099572.1"; transcript_id "ENSMUST00000190742.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28951"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28951-201"; exon_number 5; exon_id "ENSMUSE00001327365.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046779.1"; havana_transcript "OTTMUST00000121410.1";
mm10-chrY	HAVANA	gene	11763935	11764634	.	-	.	gene_id "ENSMUSG00000101690.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28390"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046780.1";
mm10-chrY	HAVANA	transcript	11763935	11764634	.	-	.	gene_id "ENSMUSG00000101690.1"; transcript_id "ENSMUST00000185212.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28390"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28390-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046780.1"; havana_transcript "OTTMUST00000121411.1";
mm10-chrY	HAVANA	exon	11763935	11764634	.	-	.	gene_id "ENSMUSG00000101690.1"; transcript_id "ENSMUST00000185212.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28390"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28390-201"; exon_number 1; exon_id "ENSMUSE00001326861.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046780.1"; havana_transcript "OTTMUST00000121411.1";
mm10-chrY	HAVANA	gene	11777111	11777489	.	-	.	gene_id "ENSMUSG00000101842.1"; gene_type "processed_pseudogene"; gene_name "Gm28391"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046781.1";
mm10-chrY	HAVANA	transcript	11777111	11777489	.	-	.	gene_id "ENSMUSG00000101842.1"; transcript_id "ENSMUST00000185202.1"; gene_type "processed_pseudogene"; gene_name "Gm28391"; transcript_type "processed_pseudogene"; transcript_name "Gm28391-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046781.1"; havana_transcript "OTTMUST00000121412.1";
mm10-chrY	HAVANA	exon	11777111	11777489	.	-	.	gene_id "ENSMUSG00000101842.1"; transcript_id "ENSMUST00000185202.1"; gene_type "processed_pseudogene"; gene_name "Gm28391"; transcript_type "processed_pseudogene"; transcript_name "Gm28391-201"; exon_number 1; exon_id "ENSMUSE00001330928.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046781.1"; havana_transcript "OTTMUST00000121412.1";
mm10-chrY	HAVANA	gene	11800542	11801238	.	-	.	gene_id "ENSMUSG00000101871.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28389"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046782.1";
mm10-chrY	HAVANA	transcript	11800542	11801238	.	-	.	gene_id "ENSMUSG00000101871.1"; transcript_id "ENSMUST00000190090.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28389"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28389-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046782.1"; havana_transcript "OTTMUST00000121413.1";
mm10-chrY	HAVANA	exon	11800542	11801238	.	-	.	gene_id "ENSMUSG00000101871.1"; transcript_id "ENSMUST00000190090.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28389"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28389-201"; exon_number 1; exon_id "ENSMUSE00001333413.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046782.1"; havana_transcript "OTTMUST00000121413.1";
mm10-chrY	HAVANA	gene	12019193	12019884	.	-	.	gene_id "ENSMUSG00000100919.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28655"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046822.1";
mm10-chrY	HAVANA	transcript	12019193	12019884	.	-	.	gene_id "ENSMUSG00000100919.1"; transcript_id "ENSMUST00000191538.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28655"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28655-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046822.1"; havana_transcript "OTTMUST00000121460.1";
mm10-chrY	HAVANA	exon	12019193	12019884	.	-	.	gene_id "ENSMUSG00000100919.1"; transcript_id "ENSMUST00000191538.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28655"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28655-201"; exon_number 1; exon_id "ENSMUSE00001329315.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046822.1"; havana_transcript "OTTMUST00000121460.1";
mm10-chrY	HAVANA	gene	12056605	12056983	.	-	.	gene_id "ENSMUSG00000101123.1"; gene_type "processed_pseudogene"; gene_name "Gm28654"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046823.1";
mm10-chrY	HAVANA	transcript	12056605	12056983	.	-	.	gene_id "ENSMUSG00000101123.1"; transcript_id "ENSMUST00000189801.1"; gene_type "processed_pseudogene"; gene_name "Gm28654"; transcript_type "processed_pseudogene"; transcript_name "Gm28654-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046823.1"; havana_transcript "OTTMUST00000121461.1";
mm10-chrY	HAVANA	exon	12056605	12056983	.	-	.	gene_id "ENSMUSG00000101123.1"; transcript_id "ENSMUST00000189801.1"; gene_type "processed_pseudogene"; gene_name "Gm28654"; transcript_type "processed_pseudogene"; transcript_name "Gm28654-201"; exon_number 1; exon_id "ENSMUSE00001327709.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046823.1"; havana_transcript "OTTMUST00000121461.1";
mm10-chrY	HAVANA	gene	12175563	12176249	.	-	.	gene_id "ENSMUSG00000101276.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28657"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046824.1";
mm10-chrY	HAVANA	transcript	12175563	12176249	.	-	.	gene_id "ENSMUSG00000101276.1"; transcript_id "ENSMUST00000186950.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28657"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28657-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046824.1"; havana_transcript "OTTMUST00000121462.1";
mm10-chrY	HAVANA	exon	12175563	12176249	.	-	.	gene_id "ENSMUSG00000101276.1"; transcript_id "ENSMUST00000186950.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28657"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28657-201"; exon_number 1; exon_id "ENSMUSE00001320255.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046824.1"; havana_transcript "OTTMUST00000121462.1";
mm10-chrY	HAVANA	gene	12211889	12212386	.	+	.	gene_id "ENSMUSG00000100368.1"; gene_type "lincRNA"; gene_name "Gm28656"; level 2; havana_gene "OTTMUSG00000046825.1";
mm10-chrY	HAVANA	transcript	12211889	12212386	.	+	.	gene_id "ENSMUSG00000100368.1"; transcript_id "ENSMUST00000190017.1"; gene_type "lincRNA"; gene_name "Gm28656"; transcript_type "lincRNA"; transcript_name "Gm28656-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046825.1"; havana_transcript "OTTMUST00000121463.1";
mm10-chrY	HAVANA	exon	12211889	12211993	.	+	.	gene_id "ENSMUSG00000100368.1"; transcript_id "ENSMUST00000190017.1"; gene_type "lincRNA"; gene_name "Gm28656"; transcript_type "lincRNA"; transcript_name "Gm28656-201"; exon_number 1; exon_id "ENSMUSE00001334385.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046825.1"; havana_transcript "OTTMUST00000121463.1";
mm10-chrY	HAVANA	exon	12212318	12212386	.	+	.	gene_id "ENSMUSG00000100368.1"; transcript_id "ENSMUST00000190017.1"; gene_type "lincRNA"; gene_name "Gm28656"; transcript_type "lincRNA"; transcript_name "Gm28656-201"; exon_number 2; exon_id "ENSMUSE00001331383.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046825.1"; havana_transcript "OTTMUST00000121463.1";
mm10-chrY	HAVANA	gene	12273932	12306702	.	+	.	gene_id "ENSMUSG00000100231.1"; gene_type "protein_coding"; gene_name "Gm29554"; level 2; havana_gene "OTTMUSG00000048645.1";
mm10-chrY	HAVANA	transcript	12273932	12306702	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	exon	12273932	12273975	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 1; exon_id "ENSMUSE00001324633.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	exon	12275335	12275466	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 2; exon_id "ENSMUSE00001326516.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	CDS	12275349	12275466	.	+	0	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 2; exon_id "ENSMUSE00001326516.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	start_codon	12275349	12275351	.	+	0	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 2; exon_id "ENSMUSE00001326516.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	exon	12290745	12290811	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 3; exon_id "ENSMUSE00001330356.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	CDS	12290745	12290811	.	+	2	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 3; exon_id "ENSMUSE00001330356.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	exon	12291380	12291414	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 4; exon_id "ENSMUSE00001327799.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	CDS	12291380	12291414	.	+	1	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 4; exon_id "ENSMUSE00001327799.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	exon	12298527	12298644	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 5; exon_id "ENSMUSE00001326447.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	CDS	12298527	12298644	.	+	2	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 5; exon_id "ENSMUSE00001326447.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	exon	12299569	12299668	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 6; exon_id "ENSMUSE00001333845.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	CDS	12299569	12299668	.	+	1	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 6; exon_id "ENSMUSE00001333845.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	exon	12306019	12306117	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 7; exon_id "ENSMUSE00001326655.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	CDS	12306019	12306117	.	+	0	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 7; exon_id "ENSMUSE00001326655.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	exon	12306477	12306702	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 8; exon_id "ENSMUSE00001324982.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	CDS	12306477	12306503	.	+	0	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 8; exon_id "ENSMUSE00001324982.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	stop_codon	12306504	12306506	.	+	0	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 8; exon_id "ENSMUSE00001324982.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	UTR	12273932	12273975	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 1; exon_id "ENSMUSE00001324633.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	UTR	12275335	12275348	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 2; exon_id "ENSMUSE00001326516.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	UTR	12306504	12306702	.	+	.	gene_id "ENSMUSG00000100231.1"; transcript_id "ENSMUST00000187922.1"; gene_type "protein_coding"; gene_name "Gm29554"; transcript_type "protein_coding"; transcript_name "Gm29554-201"; exon_number 8; exon_id "ENSMUSE00001324982.1"; level 2; protein_id "ENSMUSP00000139522.1"; transcript_support_level "5"; tag "non_canonical_other"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048645.1"; havana_transcript "OTTMUST00000124587.1";
mm10-chrY	HAVANA	gene	12330536	12331231	.	-	.	gene_id "ENSMUSG00000101469.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29556"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048646.1";
mm10-chrY	HAVANA	transcript	12330536	12331231	.	-	.	gene_id "ENSMUSG00000101469.1"; transcript_id "ENSMUST00000187591.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29556"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29556-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048646.1"; havana_transcript "OTTMUST00000124588.1";
mm10-chrY	HAVANA	exon	12330536	12331231	.	-	.	gene_id "ENSMUSG00000101469.1"; transcript_id "ENSMUST00000187591.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29556"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29556-201"; exon_number 1; exon_id "ENSMUSE00001326258.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048646.1"; havana_transcript "OTTMUST00000124588.1";
mm10-chrY	HAVANA	gene	12381981	12384008	.	+	.	gene_id "ENSMUSG00000095508.2"; gene_type "protein_coding"; gene_name "Gm20812"; level 2; havana_gene "OTTMUSG00000048647.1";
mm10-chrY	HAVANA	transcript	12381981	12384008	.	+	.	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000189550.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-202"; level 2; protein_id "ENSMUSP00000139838.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1"; havana_transcript "OTTMUST00000124589.1";
mm10-chrY	HAVANA	exon	12381981	12382104	.	+	.	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000189550.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-202"; exon_number 1; exon_id "ENSMUSE00001327064.1"; level 2; protein_id "ENSMUSP00000139838.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1"; havana_transcript "OTTMUST00000124589.1";
mm10-chrY	HAVANA	exon	12382903	12384008	.	+	.	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000189550.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-202"; exon_number 2; exon_id "ENSMUSE00001327834.1"; level 2; protein_id "ENSMUSP00000139838.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1"; havana_transcript "OTTMUST00000124589.1";
mm10-chrY	HAVANA	CDS	12383184	12383864	.	+	0	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000189550.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-202"; exon_number 2; exon_id "ENSMUSE00001327834.1"; level 2; protein_id "ENSMUSP00000139838.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1"; havana_transcript "OTTMUST00000124589.1";
mm10-chrY	HAVANA	start_codon	12383184	12383186	.	+	0	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000189550.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-202"; exon_number 2; exon_id "ENSMUSE00001327834.1"; level 2; protein_id "ENSMUSP00000139838.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1"; havana_transcript "OTTMUST00000124589.1";
mm10-chrY	HAVANA	stop_codon	12383865	12383867	.	+	0	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000189550.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-202"; exon_number 2; exon_id "ENSMUSE00001327834.1"; level 2; protein_id "ENSMUSP00000139838.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1"; havana_transcript "OTTMUST00000124589.1";
mm10-chrY	HAVANA	UTR	12381981	12382104	.	+	.	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000189550.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-202"; exon_number 1; exon_id "ENSMUSE00001327064.1"; level 2; protein_id "ENSMUSP00000139838.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1"; havana_transcript "OTTMUST00000124589.1";
mm10-chrY	HAVANA	UTR	12382903	12383183	.	+	.	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000189550.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-202"; exon_number 2; exon_id "ENSMUSE00001327834.1"; level 2; protein_id "ENSMUSP00000139838.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1"; havana_transcript "OTTMUST00000124589.1";
mm10-chrY	HAVANA	UTR	12383865	12384008	.	+	.	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000189550.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-202"; exon_number 2; exon_id "ENSMUSE00001327834.1"; level 2; protein_id "ENSMUSP00000139838.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_uORF"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1"; havana_transcript "OTTMUST00000124589.1";
mm10-chrY	ENSEMBL	transcript	12383184	12383867	.	+	.	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000179220.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-201"; level 3; protein_id "ENSMUSP00000137553.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1";
mm10-chrY	ENSEMBL	exon	12383184	12383867	.	+	.	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000179220.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-201"; exon_number 1; exon_id "ENSMUSE00001032289.1"; level 3; protein_id "ENSMUSP00000137553.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1";
mm10-chrY	ENSEMBL	CDS	12383184	12383864	.	+	0	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000179220.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-201"; exon_number 1; exon_id "ENSMUSE00001032289.1"; level 3; protein_id "ENSMUSP00000137553.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1";
mm10-chrY	ENSEMBL	start_codon	12383184	12383186	.	+	0	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000179220.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-201"; exon_number 1; exon_id "ENSMUSE00001032289.1"; level 3; protein_id "ENSMUSP00000137553.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1";
mm10-chrY	ENSEMBL	stop_codon	12383865	12383867	.	+	0	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000179220.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-201"; exon_number 1; exon_id "ENSMUSE00001032289.1"; level 3; protein_id "ENSMUSP00000137553.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1";
mm10-chrY	ENSEMBL	UTR	12383865	12383867	.	+	.	gene_id "ENSMUSG00000095508.2"; transcript_id "ENSMUST00000179220.1"; gene_type "protein_coding"; gene_name "Gm20812"; transcript_type "protein_coding"; transcript_name "Gm20812-201"; exon_number 1; exon_id "ENSMUSE00001032289.1"; level 3; protein_id "ENSMUSP00000137553.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048647.1";
mm10-chrY	HAVANA	gene	12418987	12419685	.	+	.	gene_id "ENSMUSG00000103330.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35108"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050516.1";
mm10-chrY	HAVANA	transcript	12418987	12419685	.	+	.	gene_id "ENSMUSG00000103330.1"; transcript_id "ENSMUST00000194321.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35108"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35108-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050516.1"; havana_transcript "OTTMUST00000128130.1";
mm10-chrY	HAVANA	exon	12418987	12419685	.	+	.	gene_id "ENSMUSG00000103330.1"; transcript_id "ENSMUST00000194321.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35108"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35108-201"; exon_number 1; exon_id "ENSMUSE00001343471.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050516.1"; havana_transcript "OTTMUST00000128130.1";
mm10-chrY	HAVANA	gene	12513577	12516809	.	-	.	gene_id "ENSMUSG00000104505.5"; gene_type "lincRNA"; gene_name "Gm37739"; level 2; havana_gene "OTTMUSG00000050525.1";
mm10-chrY	HAVANA	transcript	12513577	12516809	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000191742.5"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128146.1";
mm10-chrY	HAVANA	exon	12516170	12516809	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000191742.5"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-201"; exon_number 1; exon_id "ENSMUSE00001345996.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128146.1";
mm10-chrY	HAVANA	exon	12515499	12515684	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000191742.5"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-201"; exon_number 2; exon_id "ENSMUSE00001341783.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128146.1";
mm10-chrY	HAVANA	exon	12514599	12514782	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000191742.5"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-201"; exon_number 3; exon_id "ENSMUSE00001336976.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128146.1";
mm10-chrY	HAVANA	exon	12513577	12514071	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000191742.5"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-201"; exon_number 4; exon_id "ENSMUSE00001338949.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128146.1";
mm10-chrY	HAVANA	transcript	12514003	12516355	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000191901.5"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128147.1";
mm10-chrY	HAVANA	exon	12516170	12516355	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000191901.5"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-202"; exon_number 1; exon_id "ENSMUSE00001337041.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128147.1";
mm10-chrY	HAVANA	exon	12515499	12515680	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000191901.5"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-202"; exon_number 2; exon_id "ENSMUSE00001340581.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128147.1";
mm10-chrY	HAVANA	exon	12514599	12514782	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000191901.5"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-202"; exon_number 3; exon_id "ENSMUSE00001336976.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128147.1";
mm10-chrY	HAVANA	exon	12514003	12514071	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000191901.5"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-202"; exon_number 4; exon_id "ENSMUSE00001341159.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128147.1";
mm10-chrY	HAVANA	transcript	12514003	12516355	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000193731.1"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128148.1";
mm10-chrY	HAVANA	exon	12516170	12516355	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000193731.1"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-203"; exon_number 1; exon_id "ENSMUSE00001337041.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128148.1";
mm10-chrY	HAVANA	exon	12515499	12515680	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000193731.1"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-203"; exon_number 2; exon_id "ENSMUSE00001340581.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128148.1";
mm10-chrY	HAVANA	exon	12514003	12514071	.	-	.	gene_id "ENSMUSG00000104505.5"; transcript_id "ENSMUST00000193731.1"; gene_type "lincRNA"; gene_name "Gm37739"; transcript_type "lincRNA"; transcript_name "Gm37739-203"; exon_number 3; exon_id "ENSMUSE00001341159.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050525.1"; havana_transcript "OTTMUST00000128148.1";
mm10-chrY	HAVANA	gene	12564103	12564795	.	+	.	gene_id "ENSMUSG00000104468.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21736"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050526.1";
mm10-chrY	HAVANA	transcript	12564103	12564795	.	+	.	gene_id "ENSMUSG00000104468.1"; transcript_id "ENSMUST00000195399.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21736"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21736-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050526.1"; havana_transcript "OTTMUST00000128149.1";
mm10-chrY	HAVANA	exon	12564103	12564795	.	+	.	gene_id "ENSMUSG00000104468.1"; transcript_id "ENSMUST00000195399.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21736"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21736-201"; exon_number 1; exon_id "ENSMUSE00001344676.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050526.1"; havana_transcript "OTTMUST00000128149.1";
mm10-chrY	HAVANA	gene	12688110	12690064	.	+	.	gene_id "ENSMUSG00000094135.1"; gene_type "TEC"; gene_name "Gm21379"; level 2; havana_gene "OTTMUSG00000050527.1";
mm10-chrY	HAVANA	transcript	12688110	12690064	.	+	.	gene_id "ENSMUSG00000094135.1"; transcript_id "ENSMUST00000179772.1"; gene_type "TEC"; gene_name "Gm21379"; transcript_type "TEC"; transcript_name "Gm21379-201"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000050527.1"; havana_transcript "OTTMUST00000128150.1";
mm10-chrY	HAVANA	exon	12688110	12690064	.	+	.	gene_id "ENSMUSG00000094135.1"; transcript_id "ENSMUST00000179772.1"; gene_type "TEC"; gene_name "Gm21379"; transcript_type "TEC"; transcript_name "Gm21379-201"; exon_number 1; exon_id "ENSMUSE00000967637.1"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000050527.1"; havana_transcript "OTTMUST00000128150.1";
mm10-chrY	HAVANA	gene	12883607	12884300	.	+	.	gene_id "ENSMUSG00000103361.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36928"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050528.1";
mm10-chrY	HAVANA	transcript	12883607	12884300	.	+	.	gene_id "ENSMUSG00000103361.1"; transcript_id "ENSMUST00000192466.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36928"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36928-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050528.1"; havana_transcript "OTTMUST00000128151.1";
mm10-chrY	HAVANA	exon	12883607	12884300	.	+	.	gene_id "ENSMUSG00000103361.1"; transcript_id "ENSMUST00000192466.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36928"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36928-201"; exon_number 1; exon_id "ENSMUSE00001344108.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050528.1"; havana_transcript "OTTMUST00000128151.1";
mm10-chrY	HAVANA	gene	13042891	13045326	.	+	.	gene_id "ENSMUSG00000104267.1"; gene_type "protein_coding"; gene_name "Gm20807"; level 2; havana_gene "OTTMUSG00000050529.1";
mm10-chrY	HAVANA	transcript	13042891	13045326	.	+	.	gene_id "ENSMUSG00000104267.1"; transcript_id "ENSMUST00000194687.1"; gene_type "protein_coding"; gene_name "Gm20807"; transcript_type "protein_coding"; transcript_name "Gm20807-201"; level 2; protein_id "ENSMUSP00000142185.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050529.1"; havana_transcript "OTTMUST00000128152.1";
mm10-chrY	HAVANA	exon	13042891	13043081	.	+	.	gene_id "ENSMUSG00000104267.1"; transcript_id "ENSMUST00000194687.1"; gene_type "protein_coding"; gene_name "Gm20807"; transcript_type "protein_coding"; transcript_name "Gm20807-201"; exon_number 1; exon_id "ENSMUSE00001343047.1"; level 2; protein_id "ENSMUSP00000142185.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050529.1"; havana_transcript "OTTMUST00000128152.1";
mm10-chrY	HAVANA	exon	13043306	13043492	.	+	.	gene_id "ENSMUSG00000104267.1"; transcript_id "ENSMUST00000194687.1"; gene_type "protein_coding"; gene_name "Gm20807"; transcript_type "protein_coding"; transcript_name "Gm20807-201"; exon_number 2; exon_id "ENSMUSE00001337527.1"; level 2; protein_id "ENSMUSP00000142185.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050529.1"; havana_transcript "OTTMUST00000128152.1";
mm10-chrY	HAVANA	exon	13044369	13045326	.	+	.	gene_id "ENSMUSG00000104267.1"; transcript_id "ENSMUST00000194687.1"; gene_type "protein_coding"; gene_name "Gm20807"; transcript_type "protein_coding"; transcript_name "Gm20807-201"; exon_number 3; exon_id "ENSMUSE00001344695.1"; level 2; protein_id "ENSMUSP00000142185.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050529.1"; havana_transcript "OTTMUST00000128152.1";
mm10-chrY	HAVANA	CDS	13044509	13045204	.	+	0	gene_id "ENSMUSG00000104267.1"; transcript_id "ENSMUST00000194687.1"; gene_type "protein_coding"; gene_name "Gm20807"; transcript_type "protein_coding"; transcript_name "Gm20807-201"; exon_number 3; exon_id "ENSMUSE00001344695.1"; level 2; protein_id "ENSMUSP00000142185.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050529.1"; havana_transcript "OTTMUST00000128152.1";
mm10-chrY	HAVANA	start_codon	13044509	13044511	.	+	0	gene_id "ENSMUSG00000104267.1"; transcript_id "ENSMUST00000194687.1"; gene_type "protein_coding"; gene_name "Gm20807"; transcript_type "protein_coding"; transcript_name "Gm20807-201"; exon_number 3; exon_id "ENSMUSE00001344695.1"; level 2; protein_id "ENSMUSP00000142185.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050529.1"; havana_transcript "OTTMUST00000128152.1";
mm10-chrY	HAVANA	stop_codon	13045205	13045207	.	+	0	gene_id "ENSMUSG00000104267.1"; transcript_id "ENSMUST00000194687.1"; gene_type "protein_coding"; gene_name "Gm20807"; transcript_type "protein_coding"; transcript_name "Gm20807-201"; exon_number 3; exon_id "ENSMUSE00001344695.1"; level 2; protein_id "ENSMUSP00000142185.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050529.1"; havana_transcript "OTTMUST00000128152.1";
mm10-chrY	HAVANA	UTR	13042891	13043081	.	+	.	gene_id "ENSMUSG00000104267.1"; transcript_id "ENSMUST00000194687.1"; gene_type "protein_coding"; gene_name "Gm20807"; transcript_type "protein_coding"; transcript_name "Gm20807-201"; exon_number 1; exon_id "ENSMUSE00001343047.1"; level 2; protein_id "ENSMUSP00000142185.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050529.1"; havana_transcript "OTTMUST00000128152.1";
mm10-chrY	HAVANA	UTR	13043306	13043492	.	+	.	gene_id "ENSMUSG00000104267.1"; transcript_id "ENSMUST00000194687.1"; gene_type "protein_coding"; gene_name "Gm20807"; transcript_type "protein_coding"; transcript_name "Gm20807-201"; exon_number 2; exon_id "ENSMUSE00001337527.1"; level 2; protein_id "ENSMUSP00000142185.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050529.1"; havana_transcript "OTTMUST00000128152.1";
mm10-chrY	HAVANA	UTR	13044369	13044508	.	+	.	gene_id "ENSMUSG00000104267.1"; transcript_id "ENSMUST00000194687.1"; gene_type "protein_coding"; gene_name "Gm20807"; transcript_type "protein_coding"; transcript_name "Gm20807-201"; exon_number 3; exon_id "ENSMUSE00001344695.1"; level 2; protein_id "ENSMUSP00000142185.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050529.1"; havana_transcript "OTTMUST00000128152.1";
mm10-chrY	HAVANA	UTR	13045205	13045326	.	+	.	gene_id "ENSMUSG00000104267.1"; transcript_id "ENSMUST00000194687.1"; gene_type "protein_coding"; gene_name "Gm20807"; transcript_type "protein_coding"; transcript_name "Gm20807-201"; exon_number 3; exon_id "ENSMUSE00001344695.1"; level 2; protein_id "ENSMUSP00000142185.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050529.1"; havana_transcript "OTTMUST00000128152.1";
mm10-chrY	HAVANA	gene	13091542	13093901	.	-	.	gene_id "ENSMUSG00000103352.1"; gene_type "lincRNA"; gene_name "Gm38084"; level 2; havana_gene "OTTMUSG00000050530.1";
mm10-chrY	HAVANA	transcript	13091542	13093901	.	-	.	gene_id "ENSMUSG00000103352.1"; transcript_id "ENSMUST00000193488.1"; gene_type "lincRNA"; gene_name "Gm38084"; transcript_type "lincRNA"; transcript_name "Gm38084-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050530.1"; havana_transcript "OTTMUST00000128153.1";
mm10-chrY	HAVANA	exon	13093716	13093901	.	-	.	gene_id "ENSMUSG00000103352.1"; transcript_id "ENSMUST00000193488.1"; gene_type "lincRNA"; gene_name "Gm38084"; transcript_type "lincRNA"; transcript_name "Gm38084-201"; exon_number 1; exon_id "ENSMUSE00001342616.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050530.1"; havana_transcript "OTTMUST00000128153.1";
mm10-chrY	HAVANA	exon	13093048	13093229	.	-	.	gene_id "ENSMUSG00000103352.1"; transcript_id "ENSMUST00000193488.1"; gene_type "lincRNA"; gene_name "Gm38084"; transcript_type "lincRNA"; transcript_name "Gm38084-201"; exon_number 2; exon_id "ENSMUSE00001336770.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050530.1"; havana_transcript "OTTMUST00000128153.1";
mm10-chrY	HAVANA	exon	13091542	13091610	.	-	.	gene_id "ENSMUSG00000103352.1"; transcript_id "ENSMUST00000193488.1"; gene_type "lincRNA"; gene_name "Gm38084"; transcript_type "lincRNA"; transcript_name "Gm38084-201"; exon_number 3; exon_id "ENSMUSE00001344818.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050530.1"; havana_transcript "OTTMUST00000128153.1";
mm10-chrY	HAVANA	gene	13120040	13122400	.	-	.	gene_id "ENSMUSG00000102335.5"; gene_type "lincRNA"; gene_name "Gm37231"; level 2; havana_gene "OTTMUSG00000050531.1";
mm10-chrY	HAVANA	transcript	13120040	13122400	.	-	.	gene_id "ENSMUSG00000102335.5"; transcript_id "ENSMUST00000191716.5"; gene_type "lincRNA"; gene_name "Gm37231"; transcript_type "lincRNA"; transcript_name "Gm37231-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050531.1"; havana_transcript "OTTMUST00000128154.1";
mm10-chrY	HAVANA	exon	13122214	13122400	.	-	.	gene_id "ENSMUSG00000102335.5"; transcript_id "ENSMUST00000191716.5"; gene_type "lincRNA"; gene_name "Gm37231"; transcript_type "lincRNA"; transcript_name "Gm37231-201"; exon_number 1; exon_id "ENSMUSE00001344032.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050531.1"; havana_transcript "OTTMUST00000128154.1";
mm10-chrY	HAVANA	exon	13121544	13121725	.	-	.	gene_id "ENSMUSG00000102335.5"; transcript_id "ENSMUST00000191716.5"; gene_type "lincRNA"; gene_name "Gm37231"; transcript_type "lincRNA"; transcript_name "Gm37231-201"; exon_number 2; exon_id "ENSMUSE00001336443.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050531.1"; havana_transcript "OTTMUST00000128154.1";
mm10-chrY	HAVANA	exon	13120635	13120818	.	-	.	gene_id "ENSMUSG00000102335.5"; transcript_id "ENSMUST00000191716.5"; gene_type "lincRNA"; gene_name "Gm37231"; transcript_type "lincRNA"; transcript_name "Gm37231-201"; exon_number 3; exon_id "ENSMUSE00001342353.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050531.1"; havana_transcript "OTTMUST00000128154.1";
mm10-chrY	HAVANA	exon	13120040	13120107	.	-	.	gene_id "ENSMUSG00000102335.5"; transcript_id "ENSMUST00000191716.5"; gene_type "lincRNA"; gene_name "Gm37231"; transcript_type "lincRNA"; transcript_name "Gm37231-201"; exon_number 4; exon_id "ENSMUSE00001343113.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050531.1"; havana_transcript "OTTMUST00000128154.1";
mm10-chrY	HAVANA	transcript	13120040	13122400	.	-	.	gene_id "ENSMUSG00000102335.5"; transcript_id "ENSMUST00000195184.1"; gene_type "lincRNA"; gene_name "Gm37231"; transcript_type "lincRNA"; transcript_name "Gm37231-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050531.1"; havana_transcript "OTTMUST00000128155.1";
mm10-chrY	HAVANA	exon	13122214	13122400	.	-	.	gene_id "ENSMUSG00000102335.5"; transcript_id "ENSMUST00000195184.1"; gene_type "lincRNA"; gene_name "Gm37231"; transcript_type "lincRNA"; transcript_name "Gm37231-202"; exon_number 1; exon_id "ENSMUSE00001344032.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050531.1"; havana_transcript "OTTMUST00000128155.1";
mm10-chrY	HAVANA	exon	13121544	13121725	.	-	.	gene_id "ENSMUSG00000102335.5"; transcript_id "ENSMUST00000195184.1"; gene_type "lincRNA"; gene_name "Gm37231"; transcript_type "lincRNA"; transcript_name "Gm37231-202"; exon_number 2; exon_id "ENSMUSE00001336443.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050531.1"; havana_transcript "OTTMUST00000128155.1";
mm10-chrY	HAVANA	exon	13120040	13120107	.	-	.	gene_id "ENSMUSG00000102335.5"; transcript_id "ENSMUST00000195184.1"; gene_type "lincRNA"; gene_name "Gm37231"; transcript_type "lincRNA"; transcript_name "Gm37231-202"; exon_number 3; exon_id "ENSMUSE00001343113.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050531.1"; havana_transcript "OTTMUST00000128155.1";
mm10-chrY	ENSEMBL	gene	13132950	13133492	.	-	.	gene_id "ENSMUSG00000095769.1"; gene_type "protein_coding"; gene_name "Gm21891"; level 3;
mm10-chrY	ENSEMBL	transcript	13132950	13133492	.	-	.	gene_id "ENSMUSG00000095769.1"; transcript_id "ENSMUST00000179284.1"; gene_type "protein_coding"; gene_name "Gm21891"; transcript_type "protein_coding"; transcript_name "Gm21891-201"; level 3; protein_id "ENSMUSP00000136646.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	13132950	13133492	.	-	.	gene_id "ENSMUSG00000095769.1"; transcript_id "ENSMUST00000179284.1"; gene_type "protein_coding"; gene_name "Gm21891"; transcript_type "protein_coding"; transcript_name "Gm21891-201"; exon_number 1; exon_id "ENSMUSE00001091126.1"; level 3; protein_id "ENSMUSP00000136646.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	13132953	13133492	.	-	0	gene_id "ENSMUSG00000095769.1"; transcript_id "ENSMUST00000179284.1"; gene_type "protein_coding"; gene_name "Gm21891"; transcript_type "protein_coding"; transcript_name "Gm21891-201"; exon_number 1; exon_id "ENSMUSE00001091126.1"; level 3; protein_id "ENSMUSP00000136646.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	13133490	13133492	.	-	0	gene_id "ENSMUSG00000095769.1"; transcript_id "ENSMUST00000179284.1"; gene_type "protein_coding"; gene_name "Gm21891"; transcript_type "protein_coding"; transcript_name "Gm21891-201"; exon_number 1; exon_id "ENSMUSE00001091126.1"; level 3; protein_id "ENSMUSP00000136646.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	13132950	13132952	.	-	0	gene_id "ENSMUSG00000095769.1"; transcript_id "ENSMUST00000179284.1"; gene_type "protein_coding"; gene_name "Gm21891"; transcript_type "protein_coding"; transcript_name "Gm21891-201"; exon_number 1; exon_id "ENSMUSE00001091126.1"; level 3; protein_id "ENSMUSP00000136646.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	13132950	13132952	.	-	.	gene_id "ENSMUSG00000095769.1"; transcript_id "ENSMUST00000179284.1"; gene_type "protein_coding"; gene_name "Gm21891"; transcript_type "protein_coding"; transcript_name "Gm21891-201"; exon_number 1; exon_id "ENSMUSE00001091126.1"; level 3; protein_id "ENSMUSP00000136646.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	13161968	13164408	.	+	.	gene_id "ENSMUSG00000096820.2"; gene_type "protein_coding"; gene_name "Gm21425"; level 2; havana_gene "OTTMUSG00000050532.1";
mm10-chrY	HAVANA	transcript	13161968	13164408	.	+	.	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000195626.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-202"; level 2; protein_id "ENSMUSP00000141545.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1"; havana_transcript "OTTMUST00000128156.1";
mm10-chrY	HAVANA	exon	13161968	13162158	.	+	.	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000195626.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-202"; exon_number 1; exon_id "ENSMUSE00001343241.1"; level 2; protein_id "ENSMUSP00000141545.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1"; havana_transcript "OTTMUST00000128156.1";
mm10-chrY	HAVANA	exon	13162383	13162569	.	+	.	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000195626.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-202"; exon_number 2; exon_id "ENSMUSE00001341110.1"; level 2; protein_id "ENSMUSP00000141545.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1"; havana_transcript "OTTMUST00000128156.1";
mm10-chrY	HAVANA	exon	13163442	13164408	.	+	.	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000195626.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-202"; exon_number 3; exon_id "ENSMUSE00001345167.1"; level 2; protein_id "ENSMUSP00000141545.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1"; havana_transcript "OTTMUST00000128156.1";
mm10-chrY	HAVANA	CDS	13163582	13164277	.	+	0	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000195626.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-202"; exon_number 3; exon_id "ENSMUSE00001345167.1"; level 2; protein_id "ENSMUSP00000141545.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1"; havana_transcript "OTTMUST00000128156.1";
mm10-chrY	HAVANA	start_codon	13163582	13163584	.	+	0	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000195626.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-202"; exon_number 3; exon_id "ENSMUSE00001345167.1"; level 2; protein_id "ENSMUSP00000141545.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1"; havana_transcript "OTTMUST00000128156.1";
mm10-chrY	HAVANA	stop_codon	13164278	13164280	.	+	0	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000195626.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-202"; exon_number 3; exon_id "ENSMUSE00001345167.1"; level 2; protein_id "ENSMUSP00000141545.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1"; havana_transcript "OTTMUST00000128156.1";
mm10-chrY	HAVANA	UTR	13161968	13162158	.	+	.	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000195626.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-202"; exon_number 1; exon_id "ENSMUSE00001343241.1"; level 2; protein_id "ENSMUSP00000141545.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1"; havana_transcript "OTTMUST00000128156.1";
mm10-chrY	HAVANA	UTR	13162383	13162569	.	+	.	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000195626.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-202"; exon_number 2; exon_id "ENSMUSE00001341110.1"; level 2; protein_id "ENSMUSP00000141545.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1"; havana_transcript "OTTMUST00000128156.1";
mm10-chrY	HAVANA	UTR	13163442	13163581	.	+	.	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000195626.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-202"; exon_number 3; exon_id "ENSMUSE00001345167.1"; level 2; protein_id "ENSMUSP00000141545.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1"; havana_transcript "OTTMUST00000128156.1";
mm10-chrY	HAVANA	UTR	13164278	13164408	.	+	.	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000195626.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-202"; exon_number 3; exon_id "ENSMUSE00001345167.1"; level 2; protein_id "ENSMUSP00000141545.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1"; havana_transcript "OTTMUST00000128156.1";
mm10-chrY	ENSEMBL	transcript	13163582	13164280	.	+	.	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000180318.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-201"; level 3; protein_id "ENSMUSP00000137250.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1";
mm10-chrY	ENSEMBL	exon	13163582	13164280	.	+	.	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000180318.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-201"; exon_number 1; exon_id "ENSMUSE00001005104.1"; level 3; protein_id "ENSMUSP00000137250.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1";
mm10-chrY	ENSEMBL	CDS	13163582	13164277	.	+	0	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000180318.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-201"; exon_number 1; exon_id "ENSMUSE00001005104.1"; level 3; protein_id "ENSMUSP00000137250.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1";
mm10-chrY	ENSEMBL	start_codon	13163582	13163584	.	+	0	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000180318.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-201"; exon_number 1; exon_id "ENSMUSE00001005104.1"; level 3; protein_id "ENSMUSP00000137250.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1";
mm10-chrY	ENSEMBL	stop_codon	13164278	13164280	.	+	0	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000180318.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-201"; exon_number 1; exon_id "ENSMUSE00001005104.1"; level 3; protein_id "ENSMUSP00000137250.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1";
mm10-chrY	ENSEMBL	UTR	13164278	13164280	.	+	.	gene_id "ENSMUSG00000096820.2"; transcript_id "ENSMUST00000180318.1"; gene_type "protein_coding"; gene_name "Gm21425"; transcript_type "protein_coding"; transcript_name "Gm21425-201"; exon_number 1; exon_id "ENSMUSE00001005104.1"; level 3; protein_id "ENSMUSP00000137250.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050532.1";
mm10-chrY	HAVANA	gene	13210161	13213395	.	-	.	gene_id "ENSMUSG00000103474.1"; gene_type "lincRNA"; gene_name "Gm37252"; level 2; havana_gene "OTTMUSG00000050533.1";
mm10-chrY	HAVANA	transcript	13210161	13213395	.	-	.	gene_id "ENSMUSG00000103474.1"; transcript_id "ENSMUST00000195063.1"; gene_type "lincRNA"; gene_name "Gm37252"; transcript_type "lincRNA"; transcript_name "Gm37252-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050533.1"; havana_transcript "OTTMUST00000128157.1";
mm10-chrY	HAVANA	exon	13212757	13213395	.	-	.	gene_id "ENSMUSG00000103474.1"; transcript_id "ENSMUST00000195063.1"; gene_type "lincRNA"; gene_name "Gm37252"; transcript_type "lincRNA"; transcript_name "Gm37252-201"; exon_number 1; exon_id "ENSMUSE00001336477.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050533.1"; havana_transcript "OTTMUST00000128157.1";
mm10-chrY	HAVANA	exon	13212088	13212273	.	-	.	gene_id "ENSMUSG00000103474.1"; transcript_id "ENSMUST00000195063.1"; gene_type "lincRNA"; gene_name "Gm37252"; transcript_type "lincRNA"; transcript_name "Gm37252-201"; exon_number 2; exon_id "ENSMUSE00001339848.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050533.1"; havana_transcript "OTTMUST00000128157.1";
mm10-chrY	HAVANA	exon	13211177	13211360	.	-	.	gene_id "ENSMUSG00000103474.1"; transcript_id "ENSMUST00000195063.1"; gene_type "lincRNA"; gene_name "Gm37252"; transcript_type "lincRNA"; transcript_name "Gm37252-201"; exon_number 3; exon_id "ENSMUSE00001344891.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050533.1"; havana_transcript "OTTMUST00000128157.1";
mm10-chrY	HAVANA	exon	13210161	13210650	.	-	.	gene_id "ENSMUSG00000103474.1"; transcript_id "ENSMUST00000195063.1"; gene_type "lincRNA"; gene_name "Gm37252"; transcript_type "lincRNA"; transcript_name "Gm37252-201"; exon_number 4; exon_id "ENSMUSE00001338772.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050533.1"; havana_transcript "OTTMUST00000128157.1";
mm10-chrY	ENSEMBL	gene	13223386	13223928	.	-	.	gene_id "ENSMUSG00000095759.1"; gene_type "protein_coding"; gene_name "Gm21828"; level 3;
mm10-chrY	ENSEMBL	transcript	13223386	13223928	.	-	.	gene_id "ENSMUSG00000095759.1"; transcript_id "ENSMUST00000178050.1"; gene_type "protein_coding"; gene_name "Gm21828"; transcript_type "protein_coding"; transcript_name "Gm21828-201"; level 3; protein_id "ENSMUSP00000136822.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	13223386	13223928	.	-	.	gene_id "ENSMUSG00000095759.1"; transcript_id "ENSMUST00000178050.1"; gene_type "protein_coding"; gene_name "Gm21828"; transcript_type "protein_coding"; transcript_name "Gm21828-201"; exon_number 1; exon_id "ENSMUSE00001016420.1"; level 3; protein_id "ENSMUSP00000136822.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	13223389	13223928	.	-	0	gene_id "ENSMUSG00000095759.1"; transcript_id "ENSMUST00000178050.1"; gene_type "protein_coding"; gene_name "Gm21828"; transcript_type "protein_coding"; transcript_name "Gm21828-201"; exon_number 1; exon_id "ENSMUSE00001016420.1"; level 3; protein_id "ENSMUSP00000136822.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	13223926	13223928	.	-	0	gene_id "ENSMUSG00000095759.1"; transcript_id "ENSMUST00000178050.1"; gene_type "protein_coding"; gene_name "Gm21828"; transcript_type "protein_coding"; transcript_name "Gm21828-201"; exon_number 1; exon_id "ENSMUSE00001016420.1"; level 3; protein_id "ENSMUSP00000136822.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	13223386	13223388	.	-	0	gene_id "ENSMUSG00000095759.1"; transcript_id "ENSMUST00000178050.1"; gene_type "protein_coding"; gene_name "Gm21828"; transcript_type "protein_coding"; transcript_name "Gm21828-201"; exon_number 1; exon_id "ENSMUSE00001016420.1"; level 3; protein_id "ENSMUSP00000136822.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	13223386	13223388	.	-	.	gene_id "ENSMUSG00000095759.1"; transcript_id "ENSMUST00000178050.1"; gene_type "protein_coding"; gene_name "Gm21828"; transcript_type "protein_coding"; transcript_name "Gm21828-201"; exon_number 1; exon_id "ENSMUSE00001016420.1"; level 3; protein_id "ENSMUSP00000136822.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	13252391	13254834	.	+	.	gene_id "ENSMUSG00000103468.1"; gene_type "protein_coding"; gene_name "Gm21440"; level 2; havana_gene "OTTMUSG00000050534.1";
mm10-chrY	HAVANA	transcript	13252391	13254834	.	+	.	gene_id "ENSMUSG00000103468.1"; transcript_id "ENSMUST00000192749.1"; gene_type "protein_coding"; gene_name "Gm21440"; transcript_type "protein_coding"; transcript_name "Gm21440-201"; level 2; protein_id "ENSMUSP00000141432.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050534.1"; havana_transcript "OTTMUST00000128158.1";
mm10-chrY	HAVANA	exon	13252391	13252581	.	+	.	gene_id "ENSMUSG00000103468.1"; transcript_id "ENSMUST00000192749.1"; gene_type "protein_coding"; gene_name "Gm21440"; transcript_type "protein_coding"; transcript_name "Gm21440-201"; exon_number 1; exon_id "ENSMUSE00001341725.1"; level 2; protein_id "ENSMUSP00000141432.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050534.1"; havana_transcript "OTTMUST00000128158.1";
mm10-chrY	HAVANA	exon	13252806	13252992	.	+	.	gene_id "ENSMUSG00000103468.1"; transcript_id "ENSMUST00000192749.1"; gene_type "protein_coding"; gene_name "Gm21440"; transcript_type "protein_coding"; transcript_name "Gm21440-201"; exon_number 2; exon_id "ENSMUSE00001336381.1"; level 2; protein_id "ENSMUSP00000141432.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050534.1"; havana_transcript "OTTMUST00000128158.1";
mm10-chrY	HAVANA	exon	13253869	13254834	.	+	.	gene_id "ENSMUSG00000103468.1"; transcript_id "ENSMUST00000192749.1"; gene_type "protein_coding"; gene_name "Gm21440"; transcript_type "protein_coding"; transcript_name "Gm21440-201"; exon_number 3; exon_id "ENSMUSE00001345677.1"; level 2; protein_id "ENSMUSP00000141432.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050534.1"; havana_transcript "OTTMUST00000128158.1";
mm10-chrY	HAVANA	CDS	13254009	13254704	.	+	0	gene_id "ENSMUSG00000103468.1"; transcript_id "ENSMUST00000192749.1"; gene_type "protein_coding"; gene_name "Gm21440"; transcript_type "protein_coding"; transcript_name "Gm21440-201"; exon_number 3; exon_id "ENSMUSE00001345677.1"; level 2; protein_id "ENSMUSP00000141432.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050534.1"; havana_transcript "OTTMUST00000128158.1";
mm10-chrY	HAVANA	start_codon	13254009	13254011	.	+	0	gene_id "ENSMUSG00000103468.1"; transcript_id "ENSMUST00000192749.1"; gene_type "protein_coding"; gene_name "Gm21440"; transcript_type "protein_coding"; transcript_name "Gm21440-201"; exon_number 3; exon_id "ENSMUSE00001345677.1"; level 2; protein_id "ENSMUSP00000141432.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050534.1"; havana_transcript "OTTMUST00000128158.1";
mm10-chrY	HAVANA	stop_codon	13254705	13254707	.	+	0	gene_id "ENSMUSG00000103468.1"; transcript_id "ENSMUST00000192749.1"; gene_type "protein_coding"; gene_name "Gm21440"; transcript_type "protein_coding"; transcript_name "Gm21440-201"; exon_number 3; exon_id "ENSMUSE00001345677.1"; level 2; protein_id "ENSMUSP00000141432.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050534.1"; havana_transcript "OTTMUST00000128158.1";
mm10-chrY	HAVANA	UTR	13252391	13252581	.	+	.	gene_id "ENSMUSG00000103468.1"; transcript_id "ENSMUST00000192749.1"; gene_type "protein_coding"; gene_name "Gm21440"; transcript_type "protein_coding"; transcript_name "Gm21440-201"; exon_number 1; exon_id "ENSMUSE00001341725.1"; level 2; protein_id "ENSMUSP00000141432.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050534.1"; havana_transcript "OTTMUST00000128158.1";
mm10-chrY	HAVANA	UTR	13252806	13252992	.	+	.	gene_id "ENSMUSG00000103468.1"; transcript_id "ENSMUST00000192749.1"; gene_type "protein_coding"; gene_name "Gm21440"; transcript_type "protein_coding"; transcript_name "Gm21440-201"; exon_number 2; exon_id "ENSMUSE00001336381.1"; level 2; protein_id "ENSMUSP00000141432.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050534.1"; havana_transcript "OTTMUST00000128158.1";
mm10-chrY	HAVANA	UTR	13253869	13254008	.	+	.	gene_id "ENSMUSG00000103468.1"; transcript_id "ENSMUST00000192749.1"; gene_type "protein_coding"; gene_name "Gm21440"; transcript_type "protein_coding"; transcript_name "Gm21440-201"; exon_number 3; exon_id "ENSMUSE00001345677.1"; level 2; protein_id "ENSMUSP00000141432.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050534.1"; havana_transcript "OTTMUST00000128158.1";
mm10-chrY	HAVANA	UTR	13254705	13254834	.	+	.	gene_id "ENSMUSG00000103468.1"; transcript_id "ENSMUST00000192749.1"; gene_type "protein_coding"; gene_name "Gm21440"; transcript_type "protein_coding"; transcript_name "Gm21440-201"; exon_number 3; exon_id "ENSMUSE00001345677.1"; level 2; protein_id "ENSMUSP00000141432.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050534.1"; havana_transcript "OTTMUST00000128158.1";
mm10-chrY	HAVANA	gene	13252442	13378804	.	+	.	gene_id "ENSMUSG00000093903.6"; gene_type "protein_coding"; gene_name "Gm21454"; level 2; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	ENSEMBL	transcript	13252442	13378797	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000178599.6"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-201"; level 3; protein_id "ENSMUSP00000136379.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	ENSEMBL	exon	13252442	13252581	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000178599.6"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-201"; exon_number 1; exon_id "ENSMUSE00000995036.1"; level 3; protein_id "ENSMUSP00000136379.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	ENSEMBL	exon	13376777	13376963	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000178599.6"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-201"; exon_number 2; exon_id "ENSMUSE00001071143.1"; level 3; protein_id "ENSMUSP00000136379.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	ENSEMBL	exon	13377840	13378797	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000178599.6"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-201"; exon_number 3; exon_id "ENSMUSE00000967375.1"; level 3; protein_id "ENSMUSP00000136379.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	ENSEMBL	CDS	13377980	13378675	.	+	0	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000178599.6"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-201"; exon_number 3; exon_id "ENSMUSE00000967375.1"; level 3; protein_id "ENSMUSP00000136379.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	ENSEMBL	start_codon	13377980	13377982	.	+	0	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000178599.6"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-201"; exon_number 3; exon_id "ENSMUSE00000967375.1"; level 3; protein_id "ENSMUSP00000136379.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	ENSEMBL	stop_codon	13378676	13378678	.	+	0	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000178599.6"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-201"; exon_number 3; exon_id "ENSMUSE00000967375.1"; level 3; protein_id "ENSMUSP00000136379.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	ENSEMBL	UTR	13252442	13252581	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000178599.6"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-201"; exon_number 1; exon_id "ENSMUSE00000995036.1"; level 3; protein_id "ENSMUSP00000136379.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	ENSEMBL	UTR	13376777	13376963	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000178599.6"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-201"; exon_number 2; exon_id "ENSMUSE00001071143.1"; level 3; protein_id "ENSMUSP00000136379.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	ENSEMBL	UTR	13377840	13377979	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000178599.6"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-201"; exon_number 3; exon_id "ENSMUSE00000967375.1"; level 3; protein_id "ENSMUSP00000136379.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	ENSEMBL	UTR	13378676	13378797	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000178599.6"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-201"; exon_number 3; exon_id "ENSMUSE00000967375.1"; level 3; protein_id "ENSMUSP00000136379.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1";
mm10-chrY	HAVANA	transcript	13376362	13378804	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000192204.1"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-202"; level 2; protein_id "ENSMUSP00000141810.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1"; havana_transcript "OTTMUST00000128162.1";
mm10-chrY	HAVANA	exon	13376362	13376552	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000192204.1"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-202"; exon_number 1; exon_id "ENSMUSE00001338584.1"; level 2; protein_id "ENSMUSP00000141810.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1"; havana_transcript "OTTMUST00000128162.1";
mm10-chrY	HAVANA	exon	13376777	13376963	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000192204.1"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-202"; exon_number 2; exon_id "ENSMUSE00001071143.1"; level 2; protein_id "ENSMUSP00000141810.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1"; havana_transcript "OTTMUST00000128162.1";
mm10-chrY	HAVANA	exon	13377840	13378804	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000192204.1"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-202"; exon_number 3; exon_id "ENSMUSE00001327723.2"; level 2; protein_id "ENSMUSP00000141810.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1"; havana_transcript "OTTMUST00000128162.1";
mm10-chrY	HAVANA	CDS	13377980	13378675	.	+	0	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000192204.1"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-202"; exon_number 3; exon_id "ENSMUSE00001327723.2"; level 2; protein_id "ENSMUSP00000141810.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1"; havana_transcript "OTTMUST00000128162.1";
mm10-chrY	HAVANA	start_codon	13377980	13377982	.	+	0	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000192204.1"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-202"; exon_number 3; exon_id "ENSMUSE00001327723.2"; level 2; protein_id "ENSMUSP00000141810.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1"; havana_transcript "OTTMUST00000128162.1";
mm10-chrY	HAVANA	stop_codon	13378676	13378678	.	+	0	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000192204.1"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-202"; exon_number 3; exon_id "ENSMUSE00001327723.2"; level 2; protein_id "ENSMUSP00000141810.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1"; havana_transcript "OTTMUST00000128162.1";
mm10-chrY	HAVANA	UTR	13376362	13376552	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000192204.1"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-202"; exon_number 1; exon_id "ENSMUSE00001338584.1"; level 2; protein_id "ENSMUSP00000141810.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1"; havana_transcript "OTTMUST00000128162.1";
mm10-chrY	HAVANA	UTR	13376777	13376963	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000192204.1"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-202"; exon_number 2; exon_id "ENSMUSE00001071143.1"; level 2; protein_id "ENSMUSP00000141810.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1"; havana_transcript "OTTMUST00000128162.1";
mm10-chrY	HAVANA	UTR	13377840	13377979	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000192204.1"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-202"; exon_number 3; exon_id "ENSMUSE00001327723.2"; level 2; protein_id "ENSMUSP00000141810.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1"; havana_transcript "OTTMUST00000128162.1";
mm10-chrY	HAVANA	UTR	13378676	13378804	.	+	.	gene_id "ENSMUSG00000093903.6"; transcript_id "ENSMUST00000192204.1"; gene_type "protein_coding"; gene_name "Gm21454"; transcript_type "protein_coding"; transcript_name "Gm21454-202"; exon_number 3; exon_id "ENSMUSE00001327723.2"; level 2; protein_id "ENSMUSP00000141810.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050537.1"; havana_transcript "OTTMUST00000128162.1";
mm10-chrY	HAVANA	gene	13307101	13310334	.	-	.	gene_id "ENSMUSG00000103176.1"; gene_type "lincRNA"; gene_name "Gm37147"; level 2; havana_gene "OTTMUSG00000050535.1";
mm10-chrY	HAVANA	transcript	13307101	13310334	.	-	.	gene_id "ENSMUSG00000103176.1"; transcript_id "ENSMUST00000193756.1"; gene_type "lincRNA"; gene_name "Gm37147"; transcript_type "lincRNA"; transcript_name "Gm37147-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050535.1"; havana_transcript "OTTMUST00000128159.1";
mm10-chrY	HAVANA	exon	13309698	13310334	.	-	.	gene_id "ENSMUSG00000103176.1"; transcript_id "ENSMUST00000193756.1"; gene_type "lincRNA"; gene_name "Gm37147"; transcript_type "lincRNA"; transcript_name "Gm37147-201"; exon_number 1; exon_id "ENSMUSE00001336277.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050535.1"; havana_transcript "OTTMUST00000128159.1";
mm10-chrY	HAVANA	exon	13309029	13309214	.	-	.	gene_id "ENSMUSG00000103176.1"; transcript_id "ENSMUST00000193756.1"; gene_type "lincRNA"; gene_name "Gm37147"; transcript_type "lincRNA"; transcript_name "Gm37147-201"; exon_number 2; exon_id "ENSMUSE00001342055.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050535.1"; havana_transcript "OTTMUST00000128159.1";
mm10-chrY	HAVANA	exon	13308118	13308301	.	-	.	gene_id "ENSMUSG00000103176.1"; transcript_id "ENSMUST00000193756.1"; gene_type "lincRNA"; gene_name "Gm37147"; transcript_type "lincRNA"; transcript_name "Gm37147-201"; exon_number 3; exon_id "ENSMUSE00001344181.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050535.1"; havana_transcript "OTTMUST00000128159.1";
mm10-chrY	HAVANA	exon	13307101	13307591	.	-	.	gene_id "ENSMUSG00000103176.1"; transcript_id "ENSMUST00000193756.1"; gene_type "lincRNA"; gene_name "Gm37147"; transcript_type "lincRNA"; transcript_name "Gm37147-201"; exon_number 4; exon_id "ENSMUSE00001337987.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050535.1"; havana_transcript "OTTMUST00000128159.1";
mm10-chrY	HAVANA	gene	13335783	13338145	.	-	.	gene_id "ENSMUSG00000104522.5"; gene_type "lincRNA"; gene_name "Gm38159"; level 2; havana_gene "OTTMUSG00000050536.1";
mm10-chrY	HAVANA	transcript	13335783	13338145	.	-	.	gene_id "ENSMUSG00000104522.5"; transcript_id "ENSMUST00000194145.5"; gene_type "lincRNA"; gene_name "Gm38159"; transcript_type "lincRNA"; transcript_name "Gm38159-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050536.1"; havana_transcript "OTTMUST00000128160.1";
mm10-chrY	HAVANA	exon	13337959	13338145	.	-	.	gene_id "ENSMUSG00000104522.5"; transcript_id "ENSMUST00000194145.5"; gene_type "lincRNA"; gene_name "Gm38159"; transcript_type "lincRNA"; transcript_name "Gm38159-202"; exon_number 1; exon_id "ENSMUSE00001341145.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050536.1"; havana_transcript "OTTMUST00000128160.1";
mm10-chrY	HAVANA	exon	13337289	13337470	.	-	.	gene_id "ENSMUSG00000104522.5"; transcript_id "ENSMUST00000194145.5"; gene_type "lincRNA"; gene_name "Gm38159"; transcript_type "lincRNA"; transcript_name "Gm38159-202"; exon_number 2; exon_id "ENSMUSE00001343370.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050536.1"; havana_transcript "OTTMUST00000128160.1";
mm10-chrY	HAVANA	exon	13336378	13336561	.	-	.	gene_id "ENSMUSG00000104522.5"; transcript_id "ENSMUST00000194145.5"; gene_type "lincRNA"; gene_name "Gm38159"; transcript_type "lincRNA"; transcript_name "Gm38159-202"; exon_number 3; exon_id "ENSMUSE00001340730.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050536.1"; havana_transcript "OTTMUST00000128160.1";
mm10-chrY	HAVANA	exon	13335783	13335850	.	-	.	gene_id "ENSMUSG00000104522.5"; transcript_id "ENSMUST00000194145.5"; gene_type "lincRNA"; gene_name "Gm38159"; transcript_type "lincRNA"; transcript_name "Gm38159-202"; exon_number 4; exon_id "ENSMUSE00001337742.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050536.1"; havana_transcript "OTTMUST00000128160.1";
mm10-chrY	HAVANA	transcript	13335783	13338145	.	-	.	gene_id "ENSMUSG00000104522.5"; transcript_id "ENSMUST00000193656.1"; gene_type "lincRNA"; gene_name "Gm38159"; transcript_type "lincRNA"; transcript_name "Gm38159-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050536.1"; havana_transcript "OTTMUST00000128161.1";
mm10-chrY	HAVANA	exon	13337959	13338145	.	-	.	gene_id "ENSMUSG00000104522.5"; transcript_id "ENSMUST00000193656.1"; gene_type "lincRNA"; gene_name "Gm38159"; transcript_type "lincRNA"; transcript_name "Gm38159-201"; exon_number 1; exon_id "ENSMUSE00001341145.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050536.1"; havana_transcript "OTTMUST00000128161.1";
mm10-chrY	HAVANA	exon	13337289	13337470	.	-	.	gene_id "ENSMUSG00000104522.5"; transcript_id "ENSMUST00000193656.1"; gene_type "lincRNA"; gene_name "Gm38159"; transcript_type "lincRNA"; transcript_name "Gm38159-201"; exon_number 2; exon_id "ENSMUSE00001343370.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050536.1"; havana_transcript "OTTMUST00000128161.1";
mm10-chrY	HAVANA	exon	13335783	13335850	.	-	.	gene_id "ENSMUSG00000104522.5"; transcript_id "ENSMUST00000193656.1"; gene_type "lincRNA"; gene_name "Gm38159"; transcript_type "lincRNA"; transcript_name "Gm38159-201"; exon_number 3; exon_id "ENSMUSE00001337742.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050536.1"; havana_transcript "OTTMUST00000128161.1";
mm10-chrY	ENSEMBL	gene	13348521	13349063	.	-	.	gene_id "ENSMUSG00000095462.1"; gene_type "protein_coding"; gene_name "Gm21725"; level 3;
mm10-chrY	ENSEMBL	transcript	13348521	13349063	.	-	.	gene_id "ENSMUSG00000095462.1"; transcript_id "ENSMUST00000178519.1"; gene_type "protein_coding"; gene_name "Gm21725"; transcript_type "protein_coding"; transcript_name "Gm21725-201"; level 3; protein_id "ENSMUSP00000136374.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	13348521	13349063	.	-	.	gene_id "ENSMUSG00000095462.1"; transcript_id "ENSMUST00000178519.1"; gene_type "protein_coding"; gene_name "Gm21725"; transcript_type "protein_coding"; transcript_name "Gm21725-201"; exon_number 1; exon_id "ENSMUSE00001077731.1"; level 3; protein_id "ENSMUSP00000136374.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	13348524	13349063	.	-	0	gene_id "ENSMUSG00000095462.1"; transcript_id "ENSMUST00000178519.1"; gene_type "protein_coding"; gene_name "Gm21725"; transcript_type "protein_coding"; transcript_name "Gm21725-201"; exon_number 1; exon_id "ENSMUSE00001077731.1"; level 3; protein_id "ENSMUSP00000136374.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	13349061	13349063	.	-	0	gene_id "ENSMUSG00000095462.1"; transcript_id "ENSMUST00000178519.1"; gene_type "protein_coding"; gene_name "Gm21725"; transcript_type "protein_coding"; transcript_name "Gm21725-201"; exon_number 1; exon_id "ENSMUSE00001077731.1"; level 3; protein_id "ENSMUSP00000136374.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	13348521	13348523	.	-	0	gene_id "ENSMUSG00000095462.1"; transcript_id "ENSMUST00000178519.1"; gene_type "protein_coding"; gene_name "Gm21725"; transcript_type "protein_coding"; transcript_name "Gm21725-201"; exon_number 1; exon_id "ENSMUSE00001077731.1"; level 3; protein_id "ENSMUSP00000136374.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	13348521	13348523	.	-	.	gene_id "ENSMUSG00000095462.1"; transcript_id "ENSMUST00000178519.1"; gene_type "protein_coding"; gene_name "Gm21725"; transcript_type "protein_coding"; transcript_name "Gm21725-201"; exon_number 1; exon_id "ENSMUSE00001077731.1"; level 3; protein_id "ENSMUSP00000136374.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	13423453	13426687	.	-	.	gene_id "ENSMUSG00000102177.5"; gene_type "lincRNA"; gene_name "Gm37870"; level 2; havana_gene "OTTMUSG00000050538.2";
mm10-chrY	HAVANA	transcript	13423453	13426687	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000192349.5"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128163.2";
mm10-chrY	HAVANA	exon	13426049	13426687	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000192349.5"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-201"; exon_number 1; exon_id "ENSMUSE00001340614.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128163.2";
mm10-chrY	HAVANA	exon	13425380	13425565	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000192349.5"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-201"; exon_number 2; exon_id "ENSMUSE00001340895.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128163.2";
mm10-chrY	HAVANA	exon	13424469	13424652	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000192349.5"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-201"; exon_number 3; exon_id "ENSMUSE00001344723.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128163.2";
mm10-chrY	HAVANA	exon	13423453	13423942	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000192349.5"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-201"; exon_number 4; exon_id "ENSMUSE00001345227.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128163.2";
mm10-chrY	HAVANA	transcript	13423874	13426234	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000193275.5"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128164.1";
mm10-chrY	HAVANA	exon	13426049	13426234	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000193275.5"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-203"; exon_number 1; exon_id "ENSMUSE00001343459.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128164.1";
mm10-chrY	HAVANA	exon	13425380	13425561	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000193275.5"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-203"; exon_number 2; exon_id "ENSMUSE00001339237.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128164.1";
mm10-chrY	HAVANA	exon	13424469	13424652	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000193275.5"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-203"; exon_number 3; exon_id "ENSMUSE00001344723.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128164.1";
mm10-chrY	HAVANA	exon	13423874	13423942	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000193275.5"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-203"; exon_number 4; exon_id "ENSMUSE00001338871.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128164.1";
mm10-chrY	HAVANA	transcript	13423874	13426234	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000192881.1"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128165.1";
mm10-chrY	HAVANA	exon	13426049	13426234	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000192881.1"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-202"; exon_number 1; exon_id "ENSMUSE00001343459.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128165.1";
mm10-chrY	HAVANA	exon	13425380	13425561	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000192881.1"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-202"; exon_number 2; exon_id "ENSMUSE00001339237.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128165.1";
mm10-chrY	HAVANA	exon	13423874	13423942	.	-	.	gene_id "ENSMUSG00000102177.5"; transcript_id "ENSMUST00000192881.1"; gene_type "lincRNA"; gene_name "Gm37870"; transcript_type "lincRNA"; transcript_name "Gm37870-202"; exon_number 3; exon_id "ENSMUSE00001338871.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050538.2"; havana_transcript "OTTMUST00000128165.1";
mm10-chrY	HAVANA	gene	13452288	13454653	.	-	.	gene_id "ENSMUSG00000102346.5"; gene_type "lincRNA"; gene_name "Gm37378"; level 2; havana_gene "OTTMUSG00000050555.1";
mm10-chrY	HAVANA	transcript	13452288	13454653	.	-	.	gene_id "ENSMUSG00000102346.5"; transcript_id "ENSMUST00000195795.5"; gene_type "lincRNA"; gene_name "Gm37378"; transcript_type "lincRNA"; transcript_name "Gm37378-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050555.1"; havana_transcript "OTTMUST00000128192.1";
mm10-chrY	HAVANA	exon	13454467	13454653	.	-	.	gene_id "ENSMUSG00000102346.5"; transcript_id "ENSMUST00000195795.5"; gene_type "lincRNA"; gene_name "Gm37378"; transcript_type "lincRNA"; transcript_name "Gm37378-202"; exon_number 1; exon_id "ENSMUSE00001340112.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050555.1"; havana_transcript "OTTMUST00000128192.1";
mm10-chrY	HAVANA	exon	13453796	13453977	.	-	.	gene_id "ENSMUSG00000102346.5"; transcript_id "ENSMUST00000195795.5"; gene_type "lincRNA"; gene_name "Gm37378"; transcript_type "lincRNA"; transcript_name "Gm37378-202"; exon_number 2; exon_id "ENSMUSE00001343178.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050555.1"; havana_transcript "OTTMUST00000128192.1";
mm10-chrY	HAVANA	exon	13452882	13453065	.	-	.	gene_id "ENSMUSG00000102346.5"; transcript_id "ENSMUST00000195795.5"; gene_type "lincRNA"; gene_name "Gm37378"; transcript_type "lincRNA"; transcript_name "Gm37378-202"; exon_number 3; exon_id "ENSMUSE00001336633.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050555.1"; havana_transcript "OTTMUST00000128192.1";
mm10-chrY	HAVANA	exon	13452288	13452355	.	-	.	gene_id "ENSMUSG00000102346.5"; transcript_id "ENSMUST00000195795.5"; gene_type "lincRNA"; gene_name "Gm37378"; transcript_type "lincRNA"; transcript_name "Gm37378-202"; exon_number 4; exon_id "ENSMUSE00001338423.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050555.1"; havana_transcript "OTTMUST00000128192.1";
mm10-chrY	HAVANA	transcript	13452288	13454653	.	-	.	gene_id "ENSMUSG00000102346.5"; transcript_id "ENSMUST00000193698.1"; gene_type "lincRNA"; gene_name "Gm37378"; transcript_type "lincRNA"; transcript_name "Gm37378-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050555.1"; havana_transcript "OTTMUST00000128193.1";
mm10-chrY	HAVANA	exon	13454467	13454653	.	-	.	gene_id "ENSMUSG00000102346.5"; transcript_id "ENSMUST00000193698.1"; gene_type "lincRNA"; gene_name "Gm37378"; transcript_type "lincRNA"; transcript_name "Gm37378-201"; exon_number 1; exon_id "ENSMUSE00001340112.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050555.1"; havana_transcript "OTTMUST00000128193.1";
mm10-chrY	HAVANA	exon	13453796	13453977	.	-	.	gene_id "ENSMUSG00000102346.5"; transcript_id "ENSMUST00000193698.1"; gene_type "lincRNA"; gene_name "Gm37378"; transcript_type "lincRNA"; transcript_name "Gm37378-201"; exon_number 2; exon_id "ENSMUSE00001343178.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050555.1"; havana_transcript "OTTMUST00000128193.1";
mm10-chrY	HAVANA	exon	13452288	13452355	.	-	.	gene_id "ENSMUSG00000102346.5"; transcript_id "ENSMUST00000193698.1"; gene_type "lincRNA"; gene_name "Gm37378"; transcript_type "lincRNA"; transcript_name "Gm37378-201"; exon_number 3; exon_id "ENSMUSE00001338423.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050555.1"; havana_transcript "OTTMUST00000128193.1";
mm10-chrY	ENSEMBL	gene	13465037	13465579	.	-	.	gene_id "ENSMUSG00000093883.1"; gene_type "protein_coding"; gene_name "Gm21866"; level 3;
mm10-chrY	ENSEMBL	transcript	13465037	13465579	.	-	.	gene_id "ENSMUSG00000093883.1"; transcript_id "ENSMUST00000178428.1"; gene_type "protein_coding"; gene_name "Gm21866"; transcript_type "protein_coding"; transcript_name "Gm21866-201"; level 3; protein_id "ENSMUSP00000136288.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	13465037	13465579	.	-	.	gene_id "ENSMUSG00000093883.1"; transcript_id "ENSMUST00000178428.1"; gene_type "protein_coding"; gene_name "Gm21866"; transcript_type "protein_coding"; transcript_name "Gm21866-201"; exon_number 1; exon_id "ENSMUSE00000972102.1"; level 3; protein_id "ENSMUSP00000136288.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	13465040	13465579	.	-	0	gene_id "ENSMUSG00000093883.1"; transcript_id "ENSMUST00000178428.1"; gene_type "protein_coding"; gene_name "Gm21866"; transcript_type "protein_coding"; transcript_name "Gm21866-201"; exon_number 1; exon_id "ENSMUSE00000972102.1"; level 3; protein_id "ENSMUSP00000136288.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	13465577	13465579	.	-	0	gene_id "ENSMUSG00000093883.1"; transcript_id "ENSMUST00000178428.1"; gene_type "protein_coding"; gene_name "Gm21866"; transcript_type "protein_coding"; transcript_name "Gm21866-201"; exon_number 1; exon_id "ENSMUSE00000972102.1"; level 3; protein_id "ENSMUSP00000136288.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	13465037	13465039	.	-	0	gene_id "ENSMUSG00000093883.1"; transcript_id "ENSMUST00000178428.1"; gene_type "protein_coding"; gene_name "Gm21866"; transcript_type "protein_coding"; transcript_name "Gm21866-201"; exon_number 1; exon_id "ENSMUSE00000972102.1"; level 3; protein_id "ENSMUSP00000136288.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	13465037	13465039	.	-	.	gene_id "ENSMUSG00000093883.1"; transcript_id "ENSMUST00000178428.1"; gene_type "protein_coding"; gene_name "Gm21866"; transcript_type "protein_coding"; transcript_name "Gm21866-201"; exon_number 1; exon_id "ENSMUSE00000972102.1"; level 3; protein_id "ENSMUSP00000136288.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	13494026	13496466	.	+	.	gene_id "ENSMUSG00000095900.2"; gene_type "protein_coding"; gene_name "Gm20773"; level 2; havana_gene "OTTMUSG00000050539.1";
mm10-chrY	HAVANA	transcript	13494026	13496466	.	+	.	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000193306.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-202"; level 2; protein_id "ENSMUSP00000142165.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050539.1"; havana_transcript "OTTMUST00000128166.1";
mm10-chrY	HAVANA	exon	13494026	13494216	.	+	.	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000193306.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-202"; exon_number 1; exon_id "ENSMUSE00001337565.1"; level 2; protein_id "ENSMUSP00000142165.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050539.1"; havana_transcript "OTTMUST00000128166.1";
mm10-chrY	HAVANA	exon	13494441	13494627	.	+	.	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000193306.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-202"; exon_number 2; exon_id "ENSMUSE00001339722.1"; level 2; protein_id "ENSMUSP00000142165.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050539.1"; havana_transcript "OTTMUST00000128166.1";
mm10-chrY	HAVANA	exon	13495504	13496466	.	+	.	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000193306.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-202"; exon_number 3; exon_id "ENSMUSE00001342712.1"; level 2; protein_id "ENSMUSP00000142165.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050539.1"; havana_transcript "OTTMUST00000128166.1";
mm10-chrY	HAVANA	CDS	13495642	13496337	.	+	0	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000193306.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-202"; exon_number 3; exon_id "ENSMUSE00001342712.1"; level 2; protein_id "ENSMUSP00000142165.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050539.1"; havana_transcript "OTTMUST00000128166.1";
mm10-chrY	HAVANA	start_codon	13495642	13495644	.	+	0	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000193306.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-202"; exon_number 3; exon_id "ENSMUSE00001342712.1"; level 2; protein_id "ENSMUSP00000142165.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050539.1"; havana_transcript "OTTMUST00000128166.1";
mm10-chrY	HAVANA	stop_codon	13496338	13496340	.	+	0	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000193306.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-202"; exon_number 3; exon_id "ENSMUSE00001342712.1"; level 2; protein_id "ENSMUSP00000142165.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050539.1"; havana_transcript "OTTMUST00000128166.1";
mm10-chrY	HAVANA	UTR	13494026	13494216	.	+	.	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000193306.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-202"; exon_number 1; exon_id "ENSMUSE00001337565.1"; level 2; protein_id "ENSMUSP00000142165.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050539.1"; havana_transcript "OTTMUST00000128166.1";
mm10-chrY	HAVANA	UTR	13494441	13494627	.	+	.	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000193306.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-202"; exon_number 2; exon_id "ENSMUSE00001339722.1"; level 2; protein_id "ENSMUSP00000142165.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050539.1"; havana_transcript "OTTMUST00000128166.1";
mm10-chrY	HAVANA	UTR	13495504	13495641	.	+	.	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000193306.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-202"; exon_number 3; exon_id "ENSMUSE00001342712.1"; level 2; protein_id "ENSMUSP00000142165.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050539.1"; havana_transcript "OTTMUST00000128166.1";
mm10-chrY	HAVANA	UTR	13496338	13496466	.	+	.	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000193306.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-202"; exon_number 3; exon_id "ENSMUSE00001342712.1"; level 2; protein_id "ENSMUSP00000142165.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050539.1"; havana_transcript "OTTMUST00000128166.1";
mm10-chrY	ENSEMBL	transcript	13495642	13496322	.	+	.	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000178940.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-201"; level 3; protein_id "ENSMUSP00000137200.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000050539.1";
mm10-chrY	ENSEMBL	exon	13495642	13496322	.	+	.	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000178940.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-201"; exon_number 1; exon_id "ENSMUSE00000989902.1"; level 3; protein_id "ENSMUSP00000137200.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000050539.1";
mm10-chrY	ENSEMBL	CDS	13495642	13496322	.	+	0	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000178940.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-201"; exon_number 1; exon_id "ENSMUSE00000989902.1"; level 3; protein_id "ENSMUSP00000137200.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000050539.1";
mm10-chrY	ENSEMBL	start_codon	13495642	13495644	.	+	0	gene_id "ENSMUSG00000095900.2"; transcript_id "ENSMUST00000178940.1"; gene_type "protein_coding"; gene_name "Gm20773"; transcript_type "protein_coding"; transcript_name "Gm20773-201"; exon_number 1; exon_id "ENSMUSE00000989902.1"; level 3; protein_id "ENSMUSP00000137200.1"; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000050539.1";
mm10-chrY	HAVANA	gene	13532809	13533504	.	+	.	gene_id "ENSMUSG00000102174.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36398"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050540.1";
mm10-chrY	HAVANA	transcript	13532809	13533504	.	+	.	gene_id "ENSMUSG00000102174.1"; transcript_id "ENSMUST00000192255.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36398"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36398-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050540.1"; havana_transcript "OTTMUST00000128167.1";
mm10-chrY	HAVANA	exon	13532809	13533504	.	+	.	gene_id "ENSMUSG00000102174.1"; transcript_id "ENSMUST00000192255.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36398"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36398-201"; exon_number 1; exon_id "ENSMUSE00001343916.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050540.1"; havana_transcript "OTTMUST00000128167.1";
mm10-chrY	HAVANA	gene	13569691	13570368	.	+	.	gene_id "ENSMUSG00000102583.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37441"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050541.1";
mm10-chrY	HAVANA	transcript	13569691	13570368	.	+	.	gene_id "ENSMUSG00000102583.1"; transcript_id "ENSMUST00000194430.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37441"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37441-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050541.1"; havana_transcript "OTTMUST00000128168.1";
mm10-chrY	HAVANA	exon	13569691	13570368	.	+	.	gene_id "ENSMUSG00000102583.1"; transcript_id "ENSMUST00000194430.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37441"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37441-201"; exon_number 1; exon_id "ENSMUSE00001342883.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050541.1"; havana_transcript "OTTMUST00000128168.1";
mm10-chrY	HAVANA	gene	13580701	13582258	.	-	.	gene_id "ENSMUSG00000104048.1"; gene_type "lincRNA"; gene_name "Gm37561"; level 2; havana_gene "OTTMUSG00000050542.1";
mm10-chrY	HAVANA	transcript	13580701	13582258	.	-	.	gene_id "ENSMUSG00000104048.1"; transcript_id "ENSMUST00000195221.1"; gene_type "lincRNA"; gene_name "Gm37561"; transcript_type "lincRNA"; transcript_name "Gm37561-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050542.1"; havana_transcript "OTTMUST00000128169.1";
mm10-chrY	HAVANA	exon	13582023	13582258	.	-	.	gene_id "ENSMUSG00000104048.1"; transcript_id "ENSMUST00000195221.1"; gene_type "lincRNA"; gene_name "Gm37561"; transcript_type "lincRNA"; transcript_name "Gm37561-201"; exon_number 1; exon_id "ENSMUSE00001340129.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050542.1"; havana_transcript "OTTMUST00000128169.1";
mm10-chrY	HAVANA	exon	13580701	13580832	.	-	.	gene_id "ENSMUSG00000104048.1"; transcript_id "ENSMUST00000195221.1"; gene_type "lincRNA"; gene_name "Gm37561"; transcript_type "lincRNA"; transcript_name "Gm37561-201"; exon_number 2; exon_id "ENSMUSE00001342224.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050542.1"; havana_transcript "OTTMUST00000128169.1";
mm10-chrY	HAVANA	gene	13783494	13813771	.	+	.	gene_id "ENSMUSG00000104404.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36728"; level 2; havana_gene "OTTMUSG00000050543.1";
mm10-chrY	HAVANA	transcript	13783494	13813771	.	+	.	gene_id "ENSMUSG00000104404.1"; transcript_id "ENSMUST00000195782.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36728-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050543.1"; havana_transcript "OTTMUST00000128170.1";
mm10-chrY	HAVANA	exon	13783494	13783611	.	+	.	gene_id "ENSMUSG00000104404.1"; transcript_id "ENSMUST00000195782.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36728-201"; exon_number 1; exon_id "ENSMUSE00001341252.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050543.1"; havana_transcript "OTTMUST00000128170.1";
mm10-chrY	HAVANA	exon	13794849	13794915	.	+	.	gene_id "ENSMUSG00000104404.1"; transcript_id "ENSMUST00000195782.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36728-201"; exon_number 2; exon_id "ENSMUSE00001337143.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050543.1"; havana_transcript "OTTMUST00000128170.1";
mm10-chrY	HAVANA	exon	13795471	13795505	.	+	.	gene_id "ENSMUSG00000104404.1"; transcript_id "ENSMUST00000195782.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36728-201"; exon_number 3; exon_id "ENSMUSE00001339221.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050543.1"; havana_transcript "OTTMUST00000128170.1";
mm10-chrY	HAVANA	exon	13802499	13802565	.	+	.	gene_id "ENSMUSG00000104404.1"; transcript_id "ENSMUST00000195782.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36728-201"; exon_number 4; exon_id "ENSMUSE00001340575.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050543.1"; havana_transcript "OTTMUST00000128170.1";
mm10-chrY	HAVANA	exon	13803134	13803168	.	+	.	gene_id "ENSMUSG00000104404.1"; transcript_id "ENSMUST00000195782.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36728-201"; exon_number 5; exon_id "ENSMUSE00001339305.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050543.1"; havana_transcript "OTTMUST00000128170.1";
mm10-chrY	HAVANA	exon	13810307	13810424	.	+	.	gene_id "ENSMUSG00000104404.1"; transcript_id "ENSMUST00000195782.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36728-201"; exon_number 6; exon_id "ENSMUSE00001337564.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050543.1"; havana_transcript "OTTMUST00000128170.1";
mm10-chrY	HAVANA	exon	13811161	13811259	.	+	.	gene_id "ENSMUSG00000104404.1"; transcript_id "ENSMUST00000195782.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36728-201"; exon_number 7; exon_id "ENSMUSE00001345542.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050543.1"; havana_transcript "OTTMUST00000128170.1";
mm10-chrY	HAVANA	exon	13813288	13813386	.	+	.	gene_id "ENSMUSG00000104404.1"; transcript_id "ENSMUST00000195782.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36728-201"; exon_number 8; exon_id "ENSMUSE00001342471.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050543.1"; havana_transcript "OTTMUST00000128170.1";
mm10-chrY	HAVANA	exon	13813745	13813771	.	+	.	gene_id "ENSMUSG00000104404.1"; transcript_id "ENSMUST00000195782.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36728-201"; exon_number 9; exon_id "ENSMUSE00001345675.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050543.1"; havana_transcript "OTTMUST00000128170.1";
mm10-chrY	HAVANA	gene	13873383	13874078	.	-	.	gene_id "ENSMUSG00000102799.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32295"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050500.1";
mm10-chrY	HAVANA	transcript	13873383	13874078	.	-	.	gene_id "ENSMUSG00000102799.1"; transcript_id "ENSMUST00000192558.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32295"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32295-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050500.1"; havana_transcript "OTTMUST00000128104.1";
mm10-chrY	HAVANA	exon	13873383	13874078	.	-	.	gene_id "ENSMUSG00000102799.1"; transcript_id "ENSMUST00000192558.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32295"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32295-201"; exon_number 1; exon_id "ENSMUSE00001344560.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050500.1"; havana_transcript "OTTMUST00000128104.1";
mm10-chrY	HAVANA	gene	13910346	13911041	.	-	.	gene_id "ENSMUSG00000102613.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20836"; level 2; havana_gene "OTTMUSG00000050501.1";
mm10-chrY	HAVANA	transcript	13910346	13911041	.	-	.	gene_id "ENSMUSG00000102613.1"; transcript_id "ENSMUST00000194582.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20836"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20836-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050501.1"; havana_transcript "OTTMUST00000128105.1";
mm10-chrY	HAVANA	exon	13910346	13911041	.	-	.	gene_id "ENSMUSG00000102613.1"; transcript_id "ENSMUST00000194582.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20836"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20836-201"; exon_number 1; exon_id "ENSMUSE00001340187.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050501.1"; havana_transcript "OTTMUST00000128105.1";
mm10-chrY	HAVANA	gene	13917048	13920389	.	-	.	gene_id "ENSMUSG00000103524.1"; gene_type "lincRNA"; gene_name "Gm37263"; level 2; havana_gene "OTTMUSG00000050502.1";
mm10-chrY	HAVANA	transcript	13917048	13920389	.	-	.	gene_id "ENSMUSG00000103524.1"; transcript_id "ENSMUST00000195837.1"; gene_type "lincRNA"; gene_name "Gm37263"; transcript_type "lincRNA"; transcript_name "Gm37263-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050502.1"; havana_transcript "OTTMUST00000128106.1";
mm10-chrY	HAVANA	exon	13920167	13920389	.	-	.	gene_id "ENSMUSG00000103524.1"; transcript_id "ENSMUST00000195837.1"; gene_type "lincRNA"; gene_name "Gm37263"; transcript_type "lincRNA"; transcript_name "Gm37263-201"; exon_number 1; exon_id "ENSMUSE00001345545.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050502.1"; havana_transcript "OTTMUST00000128106.1";
mm10-chrY	HAVANA	exon	13917048	13918993	.	-	.	gene_id "ENSMUSG00000103524.1"; transcript_id "ENSMUST00000195837.1"; gene_type "lincRNA"; gene_name "Gm37263"; transcript_type "lincRNA"; transcript_name "Gm37263-201"; exon_number 2; exon_id "ENSMUSE00001337650.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050502.1"; havana_transcript "OTTMUST00000128106.1";
mm10-chrY	ENSEMBL	gene	13941738	13942280	.	+	.	gene_id "ENSMUSG00000094227.1"; gene_type "protein_coding"; gene_name "Gm21767"; level 3;
mm10-chrY	ENSEMBL	transcript	13941738	13942280	.	+	.	gene_id "ENSMUSG00000094227.1"; transcript_id "ENSMUST00000178689.1"; gene_type "protein_coding"; gene_name "Gm21767"; transcript_type "protein_coding"; transcript_name "Gm21767-201"; level 3; protein_id "ENSMUSP00000137436.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	13941738	13942280	.	+	.	gene_id "ENSMUSG00000094227.1"; transcript_id "ENSMUST00000178689.1"; gene_type "protein_coding"; gene_name "Gm21767"; transcript_type "protein_coding"; transcript_name "Gm21767-201"; exon_number 1; exon_id "ENSMUSE00001031865.1"; level 3; protein_id "ENSMUSP00000137436.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	13941738	13942277	.	+	0	gene_id "ENSMUSG00000094227.1"; transcript_id "ENSMUST00000178689.1"; gene_type "protein_coding"; gene_name "Gm21767"; transcript_type "protein_coding"; transcript_name "Gm21767-201"; exon_number 1; exon_id "ENSMUSE00001031865.1"; level 3; protein_id "ENSMUSP00000137436.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	13941738	13941740	.	+	0	gene_id "ENSMUSG00000094227.1"; transcript_id "ENSMUST00000178689.1"; gene_type "protein_coding"; gene_name "Gm21767"; transcript_type "protein_coding"; transcript_name "Gm21767-201"; exon_number 1; exon_id "ENSMUSE00001031865.1"; level 3; protein_id "ENSMUSP00000137436.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	13942278	13942280	.	+	0	gene_id "ENSMUSG00000094227.1"; transcript_id "ENSMUST00000178689.1"; gene_type "protein_coding"; gene_name "Gm21767"; transcript_type "protein_coding"; transcript_name "Gm21767-201"; exon_number 1; exon_id "ENSMUSE00001031865.1"; level 3; protein_id "ENSMUSP00000137436.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	13942278	13942280	.	+	.	gene_id "ENSMUSG00000094227.1"; transcript_id "ENSMUST00000178689.1"; gene_type "protein_coding"; gene_name "Gm21767"; transcript_type "protein_coding"; transcript_name "Gm21767-201"; exon_number 1; exon_id "ENSMUSE00001031865.1"; level 3; protein_id "ENSMUSP00000137436.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	13952701	13955065	.	+	.	gene_id "ENSMUSG00000103681.5"; gene_type "lincRNA"; gene_name "Gm37130"; level 2; havana_gene "OTTMUSG00000050503.1";
mm10-chrY	HAVANA	transcript	13952701	13955065	.	+	.	gene_id "ENSMUSG00000103681.5"; transcript_id "ENSMUST00000195874.5"; gene_type "lincRNA"; gene_name "Gm37130"; transcript_type "lincRNA"; transcript_name "Gm37130-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050503.1"; havana_transcript "OTTMUST00000128107.1";
mm10-chrY	HAVANA	exon	13952701	13952887	.	+	.	gene_id "ENSMUSG00000103681.5"; transcript_id "ENSMUST00000195874.5"; gene_type "lincRNA"; gene_name "Gm37130"; transcript_type "lincRNA"; transcript_name "Gm37130-202"; exon_number 1; exon_id "ENSMUSE00001344085.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050503.1"; havana_transcript "OTTMUST00000128107.1";
mm10-chrY	HAVANA	exon	13953377	13953558	.	+	.	gene_id "ENSMUSG00000103681.5"; transcript_id "ENSMUST00000195874.5"; gene_type "lincRNA"; gene_name "Gm37130"; transcript_type "lincRNA"; transcript_name "Gm37130-202"; exon_number 2; exon_id "ENSMUSE00001345555.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050503.1"; havana_transcript "OTTMUST00000128107.1";
mm10-chrY	HAVANA	exon	13954287	13954470	.	+	.	gene_id "ENSMUSG00000103681.5"; transcript_id "ENSMUST00000195874.5"; gene_type "lincRNA"; gene_name "Gm37130"; transcript_type "lincRNA"; transcript_name "Gm37130-202"; exon_number 3; exon_id "ENSMUSE00001343602.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050503.1"; havana_transcript "OTTMUST00000128107.1";
mm10-chrY	HAVANA	exon	13954998	13955065	.	+	.	gene_id "ENSMUSG00000103681.5"; transcript_id "ENSMUST00000195874.5"; gene_type "lincRNA"; gene_name "Gm37130"; transcript_type "lincRNA"; transcript_name "Gm37130-202"; exon_number 4; exon_id "ENSMUSE00001346210.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050503.1"; havana_transcript "OTTMUST00000128107.1";
mm10-chrY	HAVANA	transcript	13952701	13955065	.	+	.	gene_id "ENSMUSG00000103681.5"; transcript_id "ENSMUST00000192707.1"; gene_type "lincRNA"; gene_name "Gm37130"; transcript_type "lincRNA"; transcript_name "Gm37130-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050503.1"; havana_transcript "OTTMUST00000128108.1";
mm10-chrY	HAVANA	exon	13952701	13952887	.	+	.	gene_id "ENSMUSG00000103681.5"; transcript_id "ENSMUST00000192707.1"; gene_type "lincRNA"; gene_name "Gm37130"; transcript_type "lincRNA"; transcript_name "Gm37130-201"; exon_number 1; exon_id "ENSMUSE00001344085.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050503.1"; havana_transcript "OTTMUST00000128108.1";
mm10-chrY	HAVANA	exon	13953377	13953558	.	+	.	gene_id "ENSMUSG00000103681.5"; transcript_id "ENSMUST00000192707.1"; gene_type "lincRNA"; gene_name "Gm37130"; transcript_type "lincRNA"; transcript_name "Gm37130-201"; exon_number 2; exon_id "ENSMUSE00001345555.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050503.1"; havana_transcript "OTTMUST00000128108.1";
mm10-chrY	HAVANA	exon	13954998	13955065	.	+	.	gene_id "ENSMUSG00000103681.5"; transcript_id "ENSMUST00000192707.1"; gene_type "lincRNA"; gene_name "Gm37130"; transcript_type "lincRNA"; transcript_name "Gm37130-201"; exon_number 3; exon_id "ENSMUSE00001346210.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050503.1"; havana_transcript "OTTMUST00000128108.1";
mm10-chrY	HAVANA	gene	13980581	13983815	.	+	.	gene_id "ENSMUSG00000104409.5"; gene_type "lincRNA"; gene_name "Gm37467"; level 2; havana_gene "OTTMUSG00000050504.1";
mm10-chrY	HAVANA	transcript	13980581	13983815	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000192785.5"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128109.1";
mm10-chrY	HAVANA	exon	13980581	13981219	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000192785.5"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-202"; exon_number 1; exon_id "ENSMUSE00001342349.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128109.1";
mm10-chrY	HAVANA	exon	13981703	13981888	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000192785.5"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-202"; exon_number 2; exon_id "ENSMUSE00001340140.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128109.1";
mm10-chrY	HAVANA	exon	13982616	13982799	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000192785.5"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-202"; exon_number 3; exon_id "ENSMUSE00001345445.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128109.1";
mm10-chrY	HAVANA	exon	13983326	13983815	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000192785.5"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-202"; exon_number 4; exon_id "ENSMUSE00001338445.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128109.1";
mm10-chrY	HAVANA	transcript	13981034	13983394	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000192156.5"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128110.1";
mm10-chrY	HAVANA	exon	13981034	13981219	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000192156.5"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-201"; exon_number 1; exon_id "ENSMUSE00001336817.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128110.1";
mm10-chrY	HAVANA	exon	13981707	13981888	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000192156.5"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-201"; exon_number 2; exon_id "ENSMUSE00001339037.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128110.1";
mm10-chrY	HAVANA	exon	13982616	13982799	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000192156.5"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-201"; exon_number 3; exon_id "ENSMUSE00001345445.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128110.1";
mm10-chrY	HAVANA	exon	13983326	13983394	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000192156.5"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-201"; exon_number 4; exon_id "ENSMUSE00001339490.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128110.1";
mm10-chrY	HAVANA	transcript	13981034	13983394	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000195697.1"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128111.1";
mm10-chrY	HAVANA	exon	13981034	13981219	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000195697.1"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-203"; exon_number 1; exon_id "ENSMUSE00001336817.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128111.1";
mm10-chrY	HAVANA	exon	13981707	13981888	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000195697.1"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-203"; exon_number 2; exon_id "ENSMUSE00001339037.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128111.1";
mm10-chrY	HAVANA	exon	13983326	13983394	.	+	.	gene_id "ENSMUSG00000104409.5"; transcript_id "ENSMUST00000195697.1"; gene_type "lincRNA"; gene_name "Gm37467"; transcript_type "lincRNA"; transcript_name "Gm37467-203"; exon_number 3; exon_id "ENSMUSE00001339490.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050504.1"; havana_transcript "OTTMUST00000128111.1";
mm10-chrY	HAVANA	gene	14029703	14030398	.	-	.	gene_id "ENSMUSG00000104127.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20928"; level 2; havana_gene "OTTMUSG00000050505.1";
mm10-chrY	HAVANA	transcript	14029703	14030398	.	-	.	gene_id "ENSMUSG00000104127.1"; transcript_id "ENSMUST00000192992.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20928"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20928-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050505.1"; havana_transcript "OTTMUST00000128112.1";
mm10-chrY	HAVANA	exon	14029703	14030398	.	-	.	gene_id "ENSMUSG00000104127.1"; transcript_id "ENSMUST00000192992.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20928"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20928-201"; exon_number 1; exon_id "ENSMUSE00001338783.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050505.1"; havana_transcript "OTTMUST00000128112.1";
mm10-chrY	HAVANA	gene	14071394	14073759	.	+	.	gene_id "ENSMUSG00000103872.5"; gene_type "lincRNA"; gene_name "Gm38363"; level 2; havana_gene "OTTMUSG00000050506.1";
mm10-chrY	HAVANA	transcript	14071394	14073759	.	+	.	gene_id "ENSMUSG00000103872.5"; transcript_id "ENSMUST00000195029.5"; gene_type "lincRNA"; gene_name "Gm38363"; transcript_type "lincRNA"; transcript_name "Gm38363-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050506.1"; havana_transcript "OTTMUST00000128113.1";
mm10-chrY	HAVANA	exon	14071394	14071580	.	+	.	gene_id "ENSMUSG00000103872.5"; transcript_id "ENSMUST00000195029.5"; gene_type "lincRNA"; gene_name "Gm38363"; transcript_type "lincRNA"; transcript_name "Gm38363-202"; exon_number 1; exon_id "ENSMUSE00001343460.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050506.1"; havana_transcript "OTTMUST00000128113.1";
mm10-chrY	HAVANA	exon	14072070	14072251	.	+	.	gene_id "ENSMUSG00000103872.5"; transcript_id "ENSMUST00000195029.5"; gene_type "lincRNA"; gene_name "Gm38363"; transcript_type "lincRNA"; transcript_name "Gm38363-202"; exon_number 2; exon_id "ENSMUSE00001341524.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050506.1"; havana_transcript "OTTMUST00000128113.1";
mm10-chrY	HAVANA	exon	14072980	14073164	.	+	.	gene_id "ENSMUSG00000103872.5"; transcript_id "ENSMUST00000195029.5"; gene_type "lincRNA"; gene_name "Gm38363"; transcript_type "lincRNA"; transcript_name "Gm38363-202"; exon_number 3; exon_id "ENSMUSE00001345566.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050506.1"; havana_transcript "OTTMUST00000128113.1";
mm10-chrY	HAVANA	exon	14073692	14073759	.	+	.	gene_id "ENSMUSG00000103872.5"; transcript_id "ENSMUST00000195029.5"; gene_type "lincRNA"; gene_name "Gm38363"; transcript_type "lincRNA"; transcript_name "Gm38363-202"; exon_number 4; exon_id "ENSMUSE00001345101.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050506.1"; havana_transcript "OTTMUST00000128113.1";
mm10-chrY	HAVANA	transcript	14071394	14073759	.	+	.	gene_id "ENSMUSG00000103872.5"; transcript_id "ENSMUST00000193723.1"; gene_type "lincRNA"; gene_name "Gm38363"; transcript_type "lincRNA"; transcript_name "Gm38363-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050506.1"; havana_transcript "OTTMUST00000128114.1";
mm10-chrY	HAVANA	exon	14071394	14071580	.	+	.	gene_id "ENSMUSG00000103872.5"; transcript_id "ENSMUST00000193723.1"; gene_type "lincRNA"; gene_name "Gm38363"; transcript_type "lincRNA"; transcript_name "Gm38363-201"; exon_number 1; exon_id "ENSMUSE00001343460.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050506.1"; havana_transcript "OTTMUST00000128114.1";
mm10-chrY	HAVANA	exon	14072070	14072251	.	+	.	gene_id "ENSMUSG00000103872.5"; transcript_id "ENSMUST00000193723.1"; gene_type "lincRNA"; gene_name "Gm38363"; transcript_type "lincRNA"; transcript_name "Gm38363-201"; exon_number 2; exon_id "ENSMUSE00001341524.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050506.1"; havana_transcript "OTTMUST00000128114.1";
mm10-chrY	HAVANA	exon	14073692	14073759	.	+	.	gene_id "ENSMUSG00000103872.5"; transcript_id "ENSMUST00000193723.1"; gene_type "lincRNA"; gene_name "Gm38363"; transcript_type "lincRNA"; transcript_name "Gm38363-201"; exon_number 3; exon_id "ENSMUSE00001345101.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050506.1"; havana_transcript "OTTMUST00000128114.1";
mm10-chrY	HAVANA	gene	14220904	14223183	.	+	.	gene_id "ENSMUSG00000102787.5"; gene_type "lincRNA"; gene_name "Gm30174"; level 2; havana_gene "OTTMUSG00000050507.1";
mm10-chrY	HAVANA	transcript	14220904	14223183	.	+	.	gene_id "ENSMUSG00000102787.5"; transcript_id "ENSMUST00000191682.5"; gene_type "lincRNA"; gene_name "Gm30174"; transcript_type "lincRNA"; transcript_name "Gm30174-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050507.1"; havana_transcript "OTTMUST00000128115.1";
mm10-chrY	HAVANA	exon	14220904	14221004	.	+	.	gene_id "ENSMUSG00000102787.5"; transcript_id "ENSMUST00000191682.5"; gene_type "lincRNA"; gene_name "Gm30174"; transcript_type "lincRNA"; transcript_name "Gm30174-201"; exon_number 1; exon_id "ENSMUSE00001343024.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050507.1"; havana_transcript "OTTMUST00000128115.1";
mm10-chrY	HAVANA	exon	14221492	14221673	.	+	.	gene_id "ENSMUSG00000102787.5"; transcript_id "ENSMUST00000191682.5"; gene_type "lincRNA"; gene_name "Gm30174"; transcript_type "lincRNA"; transcript_name "Gm30174-201"; exon_number 2; exon_id "ENSMUSE00001341866.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050507.1"; havana_transcript "OTTMUST00000128115.1";
mm10-chrY	HAVANA	exon	14222401	14222585	.	+	.	gene_id "ENSMUSG00000102787.5"; transcript_id "ENSMUST00000191682.5"; gene_type "lincRNA"; gene_name "Gm30174"; transcript_type "lincRNA"; transcript_name "Gm30174-201"; exon_number 3; exon_id "ENSMUSE00001339020.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050507.1"; havana_transcript "OTTMUST00000128115.1";
mm10-chrY	HAVANA	exon	14223115	14223183	.	+	.	gene_id "ENSMUSG00000102787.5"; transcript_id "ENSMUST00000191682.5"; gene_type "lincRNA"; gene_name "Gm30174"; transcript_type "lincRNA"; transcript_name "Gm30174-201"; exon_number 4; exon_id "ENSMUSE00001338838.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050507.1"; havana_transcript "OTTMUST00000128115.1";
mm10-chrY	HAVANA	transcript	14220904	14223183	.	+	.	gene_id "ENSMUSG00000102787.5"; transcript_id "ENSMUST00000193415.1"; gene_type "lincRNA"; gene_name "Gm30174"; transcript_type "lincRNA"; transcript_name "Gm30174-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050507.1"; havana_transcript "OTTMUST00000128116.1";
mm10-chrY	HAVANA	exon	14220904	14221004	.	+	.	gene_id "ENSMUSG00000102787.5"; transcript_id "ENSMUST00000193415.1"; gene_type "lincRNA"; gene_name "Gm30174"; transcript_type "lincRNA"; transcript_name "Gm30174-202"; exon_number 1; exon_id "ENSMUSE00001343024.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050507.1"; havana_transcript "OTTMUST00000128116.1";
mm10-chrY	HAVANA	exon	14221492	14221673	.	+	.	gene_id "ENSMUSG00000102787.5"; transcript_id "ENSMUST00000193415.1"; gene_type "lincRNA"; gene_name "Gm30174"; transcript_type "lincRNA"; transcript_name "Gm30174-202"; exon_number 2; exon_id "ENSMUSE00001341866.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050507.1"; havana_transcript "OTTMUST00000128116.1";
mm10-chrY	HAVANA	exon	14223115	14223183	.	+	.	gene_id "ENSMUSG00000102787.5"; transcript_id "ENSMUST00000193415.1"; gene_type "lincRNA"; gene_name "Gm30174"; transcript_type "lincRNA"; transcript_name "Gm30174-202"; exon_number 3; exon_id "ENSMUSE00001338838.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050507.1"; havana_transcript "OTTMUST00000128116.1";
mm10-chrY	HAVANA	gene	14282472	14284836	.	+	.	gene_id "ENSMUSG00000104499.5"; gene_type "lincRNA"; gene_name "Gm30353"; level 2; havana_gene "OTTMUSG00000050508.1";
mm10-chrY	HAVANA	transcript	14282472	14284836	.	+	.	gene_id "ENSMUSG00000104499.5"; transcript_id "ENSMUST00000195486.5"; gene_type "lincRNA"; gene_name "Gm30353"; transcript_type "lincRNA"; transcript_name "Gm30353-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050508.1"; havana_transcript "OTTMUST00000128117.1";
mm10-chrY	HAVANA	exon	14282472	14282657	.	+	.	gene_id "ENSMUSG00000104499.5"; transcript_id "ENSMUST00000195486.5"; gene_type "lincRNA"; gene_name "Gm30353"; transcript_type "lincRNA"; transcript_name "Gm30353-202"; exon_number 1; exon_id "ENSMUSE00001344707.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050508.1"; havana_transcript "OTTMUST00000128117.1";
mm10-chrY	HAVANA	exon	14283145	14283326	.	+	.	gene_id "ENSMUSG00000104499.5"; transcript_id "ENSMUST00000195486.5"; gene_type "lincRNA"; gene_name "Gm30353"; transcript_type "lincRNA"; transcript_name "Gm30353-202"; exon_number 2; exon_id "ENSMUSE00001341626.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050508.1"; havana_transcript "OTTMUST00000128117.1";
mm10-chrY	HAVANA	exon	14284055	14284239	.	+	.	gene_id "ENSMUSG00000104499.5"; transcript_id "ENSMUST00000195486.5"; gene_type "lincRNA"; gene_name "Gm30353"; transcript_type "lincRNA"; transcript_name "Gm30353-202"; exon_number 3; exon_id "ENSMUSE00001336167.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050508.1"; havana_transcript "OTTMUST00000128117.1";
mm10-chrY	HAVANA	exon	14284768	14284836	.	+	.	gene_id "ENSMUSG00000104499.5"; transcript_id "ENSMUST00000195486.5"; gene_type "lincRNA"; gene_name "Gm30353"; transcript_type "lincRNA"; transcript_name "Gm30353-202"; exon_number 4; exon_id "ENSMUSE00001345242.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050508.1"; havana_transcript "OTTMUST00000128117.1";
mm10-chrY	HAVANA	transcript	14282472	14284836	.	+	.	gene_id "ENSMUSG00000104499.5"; transcript_id "ENSMUST00000192218.1"; gene_type "lincRNA"; gene_name "Gm30353"; transcript_type "lincRNA"; transcript_name "Gm30353-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050508.1"; havana_transcript "OTTMUST00000128118.1";
mm10-chrY	HAVANA	exon	14282472	14282657	.	+	.	gene_id "ENSMUSG00000104499.5"; transcript_id "ENSMUST00000192218.1"; gene_type "lincRNA"; gene_name "Gm30353"; transcript_type "lincRNA"; transcript_name "Gm30353-201"; exon_number 1; exon_id "ENSMUSE00001344707.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050508.1"; havana_transcript "OTTMUST00000128118.1";
mm10-chrY	HAVANA	exon	14283145	14283326	.	+	.	gene_id "ENSMUSG00000104499.5"; transcript_id "ENSMUST00000192218.1"; gene_type "lincRNA"; gene_name "Gm30353"; transcript_type "lincRNA"; transcript_name "Gm30353-201"; exon_number 2; exon_id "ENSMUSE00001341626.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050508.1"; havana_transcript "OTTMUST00000128118.1";
mm10-chrY	HAVANA	exon	14284768	14284836	.	+	.	gene_id "ENSMUSG00000104499.5"; transcript_id "ENSMUST00000192218.1"; gene_type "lincRNA"; gene_name "Gm30353"; transcript_type "lincRNA"; transcript_name "Gm30353-201"; exon_number 3; exon_id "ENSMUSE00001345242.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050508.1"; havana_transcript "OTTMUST00000128118.1";
mm10-chrY	HAVANA	gene	14347558	14349915	.	+	.	gene_id "ENSMUSG00000103431.5"; gene_type "lincRNA"; gene_name "Gm30686"; level 2; havana_gene "OTTMUSG00000050509.1";
mm10-chrY	HAVANA	transcript	14347558	14349915	.	+	.	gene_id "ENSMUSG00000103431.5"; transcript_id "ENSMUST00000195371.5"; gene_type "lincRNA"; gene_name "Gm30686"; transcript_type "lincRNA"; transcript_name "Gm30686-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050509.1"; havana_transcript "OTTMUST00000128119.1";
mm10-chrY	HAVANA	exon	14347558	14347742	.	+	.	gene_id "ENSMUSG00000103431.5"; transcript_id "ENSMUST00000195371.5"; gene_type "lincRNA"; gene_name "Gm30686"; transcript_type "lincRNA"; transcript_name "Gm30686-202"; exon_number 1; exon_id "ENSMUSE00001337813.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050509.1"; havana_transcript "OTTMUST00000128119.1";
mm10-chrY	HAVANA	exon	14348224	14348405	.	+	.	gene_id "ENSMUSG00000103431.5"; transcript_id "ENSMUST00000195371.5"; gene_type "lincRNA"; gene_name "Gm30686"; transcript_type "lincRNA"; transcript_name "Gm30686-202"; exon_number 2; exon_id "ENSMUSE00001341555.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050509.1"; havana_transcript "OTTMUST00000128119.1";
mm10-chrY	HAVANA	exon	14349134	14349318	.	+	.	gene_id "ENSMUSG00000103431.5"; transcript_id "ENSMUST00000195371.5"; gene_type "lincRNA"; gene_name "Gm30686"; transcript_type "lincRNA"; transcript_name "Gm30686-202"; exon_number 3; exon_id "ENSMUSE00001344027.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050509.1"; havana_transcript "OTTMUST00000128119.1";
mm10-chrY	HAVANA	exon	14349847	14349915	.	+	.	gene_id "ENSMUSG00000103431.5"; transcript_id "ENSMUST00000195371.5"; gene_type "lincRNA"; gene_name "Gm30686"; transcript_type "lincRNA"; transcript_name "Gm30686-202"; exon_number 4; exon_id "ENSMUSE00001341339.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050509.1"; havana_transcript "OTTMUST00000128119.1";
mm10-chrY	HAVANA	transcript	14347558	14349915	.	+	.	gene_id "ENSMUSG00000103431.5"; transcript_id "ENSMUST00000195246.1"; gene_type "lincRNA"; gene_name "Gm30686"; transcript_type "lincRNA"; transcript_name "Gm30686-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050509.1"; havana_transcript "OTTMUST00000128120.1";
mm10-chrY	HAVANA	exon	14347558	14347742	.	+	.	gene_id "ENSMUSG00000103431.5"; transcript_id "ENSMUST00000195246.1"; gene_type "lincRNA"; gene_name "Gm30686"; transcript_type "lincRNA"; transcript_name "Gm30686-201"; exon_number 1; exon_id "ENSMUSE00001337813.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050509.1"; havana_transcript "OTTMUST00000128120.1";
mm10-chrY	HAVANA	exon	14348224	14348405	.	+	.	gene_id "ENSMUSG00000103431.5"; transcript_id "ENSMUST00000195246.1"; gene_type "lincRNA"; gene_name "Gm30686"; transcript_type "lincRNA"; transcript_name "Gm30686-201"; exon_number 2; exon_id "ENSMUSE00001341555.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050509.1"; havana_transcript "OTTMUST00000128120.1";
mm10-chrY	HAVANA	exon	14349847	14349915	.	+	.	gene_id "ENSMUSG00000103431.5"; transcript_id "ENSMUST00000195246.1"; gene_type "lincRNA"; gene_name "Gm30686"; transcript_type "lincRNA"; transcript_name "Gm30686-201"; exon_number 3; exon_id "ENSMUSE00001341339.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050509.1"; havana_transcript "OTTMUST00000128120.1";
mm10-chrY	HAVANA	gene	14400710	14426798	.	+	.	gene_id "ENSMUSG00000104191.1"; gene_type "protein_coding"; gene_name "Gm30737"; level 2; havana_gene "OTTMUSG00000050510.1";
mm10-chrY	HAVANA	transcript	14400710	14426798	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	exon	14400710	14400753	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 1; exon_id "ENSMUSE00001341455.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	exon	14402131	14402262	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 2; exon_id "ENSMUSE00001336306.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	CDS	14402145	14402262	.	+	0	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 2; exon_id "ENSMUSE00001336306.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	start_codon	14402145	14402147	.	+	0	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 2; exon_id "ENSMUSE00001336306.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	exon	14407581	14407647	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 3; exon_id "ENSMUSE00001336881.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	CDS	14407581	14407647	.	+	2	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 3; exon_id "ENSMUSE00001336881.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	exon	14408212	14408246	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 4; exon_id "ENSMUSE00001343321.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	CDS	14408212	14408246	.	+	1	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 4; exon_id "ENSMUSE00001343321.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	exon	14415272	14415338	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 5; exon_id "ENSMUSE00001340971.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	CDS	14415272	14415338	.	+	2	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 5; exon_id "ENSMUSE00001340971.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	exon	14415900	14415934	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 6; exon_id "ENSMUSE00001339573.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	CDS	14415900	14415934	.	+	1	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 6; exon_id "ENSMUSE00001339573.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	exon	14423100	14423217	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 7; exon_id "ENSMUSE00001339795.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	CDS	14423100	14423217	.	+	2	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 7; exon_id "ENSMUSE00001339795.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	exon	14423980	14424079	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 8; exon_id "ENSMUSE00001338446.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	CDS	14423980	14424079	.	+	1	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 8; exon_id "ENSMUSE00001338446.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	exon	14426115	14426213	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 9; exon_id "ENSMUSE00001345371.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	CDS	14426115	14426213	.	+	0	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 9; exon_id "ENSMUSE00001345371.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	exon	14426573	14426798	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 10; exon_id "ENSMUSE00001336169.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	CDS	14426573	14426599	.	+	0	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 10; exon_id "ENSMUSE00001336169.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	stop_codon	14426600	14426602	.	+	0	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 10; exon_id "ENSMUSE00001336169.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	UTR	14400710	14400753	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 1; exon_id "ENSMUSE00001341455.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	UTR	14402131	14402144	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 2; exon_id "ENSMUSE00001336306.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	UTR	14426600	14426798	.	+	.	gene_id "ENSMUSG00000104191.1"; transcript_id "ENSMUST00000192683.1"; gene_type "protein_coding"; gene_name "Gm30737"; transcript_type "protein_coding"; transcript_name "Gm30737-201"; exon_number 10; exon_id "ENSMUSE00001336169.1"; level 2; protein_id "ENSMUSP00000141356.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050510.1"; havana_transcript "OTTMUST00000128121.1";
mm10-chrY	HAVANA	gene	14525080	14528058	.	-	.	gene_id "ENSMUSG00000102492.1"; gene_type "TEC"; gene_name "Gm36987"; level 2; havana_gene "OTTMUSG00000046798.1";
mm10-chrY	HAVANA	transcript	14525080	14528058	.	-	.	gene_id "ENSMUSG00000102492.1"; transcript_id "ENSMUST00000194704.1"; gene_type "TEC"; gene_name "Gm36987"; transcript_type "TEC"; transcript_name "Gm36987-201"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000046798.1"; havana_transcript "OTTMUST00000121431.1";
mm10-chrY	HAVANA	exon	14525080	14528058	.	-	.	gene_id "ENSMUSG00000102492.1"; transcript_id "ENSMUST00000194704.1"; gene_type "TEC"; gene_name "Gm36987"; transcript_type "TEC"; transcript_name "Gm36987-201"; exon_number 1; exon_id "ENSMUSE00001345679.1"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000046798.1"; havana_transcript "OTTMUST00000121431.1";
mm10-chrY	HAVANA	gene	14801725	14802420	.	-	.	gene_id "ENSMUSG00000104260.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31186"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050511.1";
mm10-chrY	HAVANA	transcript	14801725	14802420	.	-	.	gene_id "ENSMUSG00000104260.1"; transcript_id "ENSMUST00000191786.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31186"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31186-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050511.1"; havana_transcript "OTTMUST00000128122.1";
mm10-chrY	HAVANA	exon	14801725	14802420	.	-	.	gene_id "ENSMUSG00000104260.1"; transcript_id "ENSMUST00000191786.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31186"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31186-201"; exon_number 1; exon_id "ENSMUSE00001342125.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050511.1"; havana_transcript "OTTMUST00000128122.1";
mm10-chrY	HAVANA	gene	14863840	14867073	.	+	.	gene_id "ENSMUSG00000102251.5"; gene_type "lincRNA"; gene_name "Gm37654"; level 2; havana_gene "OTTMUSG00000050512.1";
mm10-chrY	HAVANA	transcript	14863840	14867073	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000193019.5"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128123.1";
mm10-chrY	HAVANA	exon	14863840	14864478	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000193019.5"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-201"; exon_number 1; exon_id "ENSMUSE00001337314.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128123.1";
mm10-chrY	HAVANA	exon	14864962	14865147	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000193019.5"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-201"; exon_number 2; exon_id "ENSMUSE00001341867.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128123.1";
mm10-chrY	HAVANA	exon	14865874	14866057	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000193019.5"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-201"; exon_number 3; exon_id "ENSMUSE00001341852.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128123.1";
mm10-chrY	HAVANA	exon	14866585	14867073	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000193019.5"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-201"; exon_number 4; exon_id "ENSMUSE00001341287.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128123.1";
mm10-chrY	HAVANA	transcript	14864293	14866653	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000195071.5"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128124.1";
mm10-chrY	HAVANA	exon	14864293	14864478	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000195071.5"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-203"; exon_number 1; exon_id "ENSMUSE00001342567.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128124.1";
mm10-chrY	HAVANA	exon	14864966	14865147	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000195071.5"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-203"; exon_number 2; exon_id "ENSMUSE00001340929.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128124.1";
mm10-chrY	HAVANA	exon	14865874	14866057	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000195071.5"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-203"; exon_number 3; exon_id "ENSMUSE00001341852.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128124.1";
mm10-chrY	HAVANA	exon	14866585	14866653	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000195071.5"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-203"; exon_number 4; exon_id "ENSMUSE00001342352.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128124.1";
mm10-chrY	HAVANA	transcript	14864293	14866653	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000194456.1"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128125.1";
mm10-chrY	HAVANA	exon	14864293	14864478	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000194456.1"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-202"; exon_number 1; exon_id "ENSMUSE00001342567.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128125.1";
mm10-chrY	HAVANA	exon	14864966	14865147	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000194456.1"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-202"; exon_number 2; exon_id "ENSMUSE00001340929.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128125.1";
mm10-chrY	HAVANA	exon	14866585	14866653	.	+	.	gene_id "ENSMUSG00000102251.5"; transcript_id "ENSMUST00000194456.1"; gene_type "lincRNA"; gene_name "Gm37654"; transcript_type "lincRNA"; transcript_name "Gm37654-202"; exon_number 3; exon_id "ENSMUSE00001342352.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050512.1"; havana_transcript "OTTMUST00000128125.1";
mm10-chrY	HAVANA	gene	14958903	14959595	.	-	.	gene_id "ENSMUSG00000102366.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37044"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050513.1";
mm10-chrY	HAVANA	transcript	14958903	14959595	.	-	.	gene_id "ENSMUSG00000102366.1"; transcript_id "ENSMUST00000193531.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37044"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37044-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050513.1"; havana_transcript "OTTMUST00000128126.1";
mm10-chrY	HAVANA	exon	14958903	14959595	.	-	.	gene_id "ENSMUSG00000102366.1"; transcript_id "ENSMUST00000193531.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37044"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37044-201"; exon_number 1; exon_id "ENSMUSE00001342273.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050513.1"; havana_transcript "OTTMUST00000128126.1";
mm10-chrY	HAVANA	gene	15156683	15187324	.	+	.	gene_id "ENSMUSG00000103909.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31511"; level 2; havana_gene "OTTMUSG00000050514.1";
mm10-chrY	HAVANA	transcript	15156683	15187324	.	+	.	gene_id "ENSMUSG00000103909.1"; transcript_id "ENSMUST00000193134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31511"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31511-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050514.1"; havana_transcript "OTTMUST00000128127.1";
mm10-chrY	HAVANA	exon	15156683	15156791	.	+	.	gene_id "ENSMUSG00000103909.1"; transcript_id "ENSMUST00000193134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31511"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31511-201"; exon_number 1; exon_id "ENSMUSE00001336847.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050514.1"; havana_transcript "OTTMUST00000128127.1";
mm10-chrY	HAVANA	exon	15168308	15168374	.	+	.	gene_id "ENSMUSG00000103909.1"; transcript_id "ENSMUST00000193134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31511"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31511-201"; exon_number 2; exon_id "ENSMUSE00001340588.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050514.1"; havana_transcript "OTTMUST00000128127.1";
mm10-chrY	HAVANA	exon	15168981	15169015	.	+	.	gene_id "ENSMUSG00000103909.1"; transcript_id "ENSMUST00000193134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31511"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31511-201"; exon_number 3; exon_id "ENSMUSE00001344117.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050514.1"; havana_transcript "OTTMUST00000128127.1";
mm10-chrY	HAVANA	exon	15176049	15176115	.	+	.	gene_id "ENSMUSG00000103909.1"; transcript_id "ENSMUST00000193134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31511"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31511-201"; exon_number 4; exon_id "ENSMUSE00001336951.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050514.1"; havana_transcript "OTTMUST00000128127.1";
mm10-chrY	HAVANA	exon	15176685	15176719	.	+	.	gene_id "ENSMUSG00000103909.1"; transcript_id "ENSMUST00000193134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31511"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31511-201"; exon_number 5; exon_id "ENSMUSE00001336430.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050514.1"; havana_transcript "OTTMUST00000128127.1";
mm10-chrY	HAVANA	exon	15183851	15183968	.	+	.	gene_id "ENSMUSG00000103909.1"; transcript_id "ENSMUST00000193134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31511"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31511-201"; exon_number 6; exon_id "ENSMUSE00001346212.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050514.1"; havana_transcript "OTTMUST00000128127.1";
mm10-chrY	HAVANA	exon	15184725	15184824	.	+	.	gene_id "ENSMUSG00000103909.1"; transcript_id "ENSMUST00000193134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31511"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31511-201"; exon_number 7; exon_id "ENSMUSE00001342443.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050514.1"; havana_transcript "OTTMUST00000128127.1";
mm10-chrY	HAVANA	exon	15186841	15186939	.	+	.	gene_id "ENSMUSG00000103909.1"; transcript_id "ENSMUST00000193134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31511"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31511-201"; exon_number 8; exon_id "ENSMUSE00001339732.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050514.1"; havana_transcript "OTTMUST00000128127.1";
mm10-chrY	HAVANA	exon	15187298	15187324	.	+	.	gene_id "ENSMUSG00000103909.1"; transcript_id "ENSMUST00000193134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31511"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31511-201"; exon_number 9; exon_id "ENSMUSE00001344104.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050514.1"; havana_transcript "OTTMUST00000128127.1";
mm10-chrY	HAVANA	gene	15241461	15244691	.	+	.	gene_id "ENSMUSG00000102835.5"; gene_type "lincRNA"; gene_name "Gm37572"; level 2; havana_gene "OTTMUSG00000050439.1";
mm10-chrY	HAVANA	transcript	15241461	15244691	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000194043.5"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127970.1";
mm10-chrY	HAVANA	exon	15241461	15242100	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000194043.5"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-202"; exon_number 1; exon_id "ENSMUSE00001345136.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127970.1";
mm10-chrY	HAVANA	exon	15242584	15242766	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000194043.5"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-202"; exon_number 2; exon_id "ENSMUSE00001337812.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127970.1";
mm10-chrY	HAVANA	exon	15243496	15243676	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000194043.5"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-202"; exon_number 3; exon_id "ENSMUSE00001344828.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127970.1";
mm10-chrY	HAVANA	exon	15244203	15244691	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000194043.5"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-202"; exon_number 4; exon_id "ENSMUSE00001342657.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127970.1";
mm10-chrY	HAVANA	transcript	15241915	15244268	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000195046.5"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127971.1";
mm10-chrY	HAVANA	exon	15241915	15242100	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000195046.5"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-203"; exon_number 1; exon_id "ENSMUSE00001343945.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127971.1";
mm10-chrY	HAVANA	exon	15242588	15242766	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000195046.5"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-203"; exon_number 2; exon_id "ENSMUSE00001344474.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127971.1";
mm10-chrY	HAVANA	exon	15244203	15244268	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000195046.5"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-203"; exon_number 3; exon_id "ENSMUSE00001341036.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127971.1";
mm10-chrY	HAVANA	transcript	15241915	15244268	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000192579.1"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127972.1";
mm10-chrY	HAVANA	exon	15241915	15242100	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000192579.1"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-201"; exon_number 1; exon_id "ENSMUSE00001343945.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127972.1";
mm10-chrY	HAVANA	exon	15242588	15242766	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000192579.1"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-201"; exon_number 2; exon_id "ENSMUSE00001344474.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127972.1";
mm10-chrY	HAVANA	exon	15243496	15243676	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000192579.1"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-201"; exon_number 3; exon_id "ENSMUSE00001344828.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127972.1";
mm10-chrY	HAVANA	exon	15244203	15244268	.	+	.	gene_id "ENSMUSG00000102835.5"; transcript_id "ENSMUST00000192579.1"; gene_type "lincRNA"; gene_name "Gm37572"; transcript_type "lincRNA"; transcript_name "Gm37572-201"; exon_number 4; exon_id "ENSMUSE00001341036.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050439.1"; havana_transcript "OTTMUST00000127972.1";
mm10-chrY	HAVANA	gene	15270053	15273287	.	+	.	gene_id "ENSMUSG00000103943.5"; gene_type "lincRNA"; gene_name "Gm37344"; level 2; havana_gene "OTTMUSG00000050469.1";
mm10-chrY	HAVANA	transcript	15270053	15273287	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000195490.5"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128048.1";
mm10-chrY	HAVANA	exon	15270053	15270691	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000195490.5"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-203"; exon_number 1; exon_id "ENSMUSE00001344342.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128048.1";
mm10-chrY	HAVANA	exon	15271175	15271360	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000195490.5"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-203"; exon_number 2; exon_id "ENSMUSE00001337216.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128048.1";
mm10-chrY	HAVANA	exon	15272088	15272271	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000195490.5"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-203"; exon_number 3; exon_id "ENSMUSE00001341864.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128048.1";
mm10-chrY	HAVANA	exon	15272799	15273287	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000195490.5"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-203"; exon_number 4; exon_id "ENSMUSE00001342854.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128048.1";
mm10-chrY	HAVANA	transcript	15270506	15272867	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000192655.5"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128049.1";
mm10-chrY	HAVANA	exon	15270506	15270691	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000192655.5"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-202"; exon_number 1; exon_id "ENSMUSE00001337511.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128049.1";
mm10-chrY	HAVANA	exon	15271179	15271360	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000192655.5"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-202"; exon_number 2; exon_id "ENSMUSE00001342502.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128049.1";
mm10-chrY	HAVANA	exon	15272799	15272867	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000192655.5"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-202"; exon_number 3; exon_id "ENSMUSE00001343770.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128049.1";
mm10-chrY	HAVANA	transcript	15270506	15272867	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000192634.1"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128050.1";
mm10-chrY	HAVANA	exon	15270506	15270691	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000192634.1"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-201"; exon_number 1; exon_id "ENSMUSE00001337511.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128050.1";
mm10-chrY	HAVANA	exon	15271179	15271360	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000192634.1"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-201"; exon_number 2; exon_id "ENSMUSE00001342502.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128050.1";
mm10-chrY	HAVANA	exon	15272088	15272271	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000192634.1"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-201"; exon_number 3; exon_id "ENSMUSE00001341864.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128050.1";
mm10-chrY	HAVANA	exon	15272799	15272867	.	+	.	gene_id "ENSMUSG00000103943.5"; transcript_id "ENSMUST00000192634.1"; gene_type "lincRNA"; gene_name "Gm37344"; transcript_type "lincRNA"; transcript_name "Gm37344-201"; exon_number 4; exon_id "ENSMUSE00001343770.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050469.1"; havana_transcript "OTTMUST00000128050.1";
mm10-chrY	HAVANA	gene	15444179	15445304	.	+	.	gene_id "ENSMUSG00000102624.1"; gene_type "lincRNA"; gene_name "Gm37059"; level 2; havana_gene "OTTMUSG00000050488.1";
mm10-chrY	HAVANA	transcript	15444179	15445304	.	+	.	gene_id "ENSMUSG00000102624.1"; transcript_id "ENSMUST00000191723.1"; gene_type "lincRNA"; gene_name "Gm37059"; transcript_type "lincRNA"; transcript_name "Gm37059-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050488.1"; havana_transcript "OTTMUST00000128087.1";
mm10-chrY	HAVANA	exon	15444179	15444415	.	+	.	gene_id "ENSMUSG00000102624.1"; transcript_id "ENSMUST00000191723.1"; gene_type "lincRNA"; gene_name "Gm37059"; transcript_type "lincRNA"; transcript_name "Gm37059-201"; exon_number 1; exon_id "ENSMUSE00001344832.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050488.1"; havana_transcript "OTTMUST00000128087.1";
mm10-chrY	HAVANA	exon	15444864	15445304	.	+	.	gene_id "ENSMUSG00000102624.1"; transcript_id "ENSMUST00000191723.1"; gene_type "lincRNA"; gene_name "Gm37059"; transcript_type "lincRNA"; transcript_name "Gm37059-201"; exon_number 2; exon_id "ENSMUSE00001337899.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050488.1"; havana_transcript "OTTMUST00000128087.1";
mm10-chrY	HAVANA	gene	15490643	15492836	.	+	.	gene_id "ENSMUSG00000102138.1"; gene_type "lincRNA"; gene_name "Gm31942"; level 2; havana_gene "OTTMUSG00000050470.1";
mm10-chrY	HAVANA	transcript	15490643	15491954	.	+	.	gene_id "ENSMUSG00000102138.1"; transcript_id "ENSMUST00000192534.1"; gene_type "lincRNA"; gene_name "Gm31942"; transcript_type "lincRNA"; transcript_name "Gm31942-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050470.1"; havana_transcript "OTTMUST00000128051.1";
mm10-chrY	HAVANA	exon	15490643	15491283	.	+	.	gene_id "ENSMUSG00000102138.1"; transcript_id "ENSMUST00000192534.1"; gene_type "lincRNA"; gene_name "Gm31942"; transcript_type "lincRNA"; transcript_name "Gm31942-201"; exon_number 1; exon_id "ENSMUSE00001336454.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050470.1"; havana_transcript "OTTMUST00000128051.1";
mm10-chrY	HAVANA	exon	15491769	15491954	.	+	.	gene_id "ENSMUSG00000102138.1"; transcript_id "ENSMUST00000192534.1"; gene_type "lincRNA"; gene_name "Gm31942"; transcript_type "lincRNA"; transcript_name "Gm31942-201"; exon_number 2; exon_id "ENSMUSE00001336405.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050470.1"; havana_transcript "OTTMUST00000128051.1";
mm10-chrY	HAVANA	transcript	15491098	15492836	.	+	.	gene_id "ENSMUSG00000102138.1"; transcript_id "ENSMUST00000195375.1"; gene_type "lincRNA"; gene_name "Gm31942"; transcript_type "lincRNA"; transcript_name "Gm31942-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050470.1"; havana_transcript "OTTMUST00000128052.1";
mm10-chrY	HAVANA	exon	15491098	15491283	.	+	.	gene_id "ENSMUSG00000102138.1"; transcript_id "ENSMUST00000195375.1"; gene_type "lincRNA"; gene_name "Gm31942"; transcript_type "lincRNA"; transcript_name "Gm31942-202"; exon_number 1; exon_id "ENSMUSE00001340858.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050470.1"; havana_transcript "OTTMUST00000128052.1";
mm10-chrY	HAVANA	exon	15491773	15491954	.	+	.	gene_id "ENSMUSG00000102138.1"; transcript_id "ENSMUST00000195375.1"; gene_type "lincRNA"; gene_name "Gm31942"; transcript_type "lincRNA"; transcript_name "Gm31942-202"; exon_number 2; exon_id "ENSMUSE00001345561.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050470.1"; havana_transcript "OTTMUST00000128052.1";
mm10-chrY	HAVANA	exon	15492768	15492836	.	+	.	gene_id "ENSMUSG00000102138.1"; transcript_id "ENSMUST00000195375.1"; gene_type "lincRNA"; gene_name "Gm31942"; transcript_type "lincRNA"; transcript_name "Gm31942-202"; exon_number 3; exon_id "ENSMUSE00001340593.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050470.1"; havana_transcript "OTTMUST00000128052.1";
mm10-chrY	HAVANA	gene	15569795	15572225	.	-	.	gene_id "ENSMUSG00000102582.1"; gene_type "lincRNA"; gene_name "Gm37440"; level 2; havana_gene "OTTMUSG00000050471.1";
mm10-chrY	HAVANA	transcript	15569795	15572178	.	-	.	gene_id "ENSMUSG00000102582.1"; transcript_id "ENSMUST00000195572.1"; gene_type "lincRNA"; gene_name "Gm37440"; transcript_type "lincRNA"; transcript_name "Gm37440-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050471.1"; havana_transcript "OTTMUST00000128053.1";
mm10-chrY	HAVANA	exon	15572056	15572178	.	-	.	gene_id "ENSMUSG00000102582.1"; transcript_id "ENSMUST00000195572.1"; gene_type "lincRNA"; gene_name "Gm37440"; transcript_type "lincRNA"; transcript_name "Gm37440-202"; exon_number 1; exon_id "ENSMUSE00001344109.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050471.1"; havana_transcript "OTTMUST00000128053.1";
mm10-chrY	HAVANA	exon	15569795	15570898	.	-	.	gene_id "ENSMUSG00000102582.1"; transcript_id "ENSMUST00000195572.1"; gene_type "lincRNA"; gene_name "Gm37440"; transcript_type "lincRNA"; transcript_name "Gm37440-202"; exon_number 2; exon_id "ENSMUSE00001339299.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050471.1"; havana_transcript "OTTMUST00000128053.1";
mm10-chrY	HAVANA	transcript	15569801	15572225	.	-	.	gene_id "ENSMUSG00000102582.1"; transcript_id "ENSMUST00000192310.1"; gene_type "lincRNA"; gene_name "Gm37440"; transcript_type "lincRNA"; transcript_name "Gm37440-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050471.1"; havana_transcript "OTTMUST00000128054.1";
mm10-chrY	HAVANA	exon	15572172	15572225	.	-	.	gene_id "ENSMUSG00000102582.1"; transcript_id "ENSMUST00000192310.1"; gene_type "lincRNA"; gene_name "Gm37440"; transcript_type "lincRNA"; transcript_name "Gm37440-201"; exon_number 1; exon_id "ENSMUSE00001344557.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050471.1"; havana_transcript "OTTMUST00000128054.1";
mm10-chrY	HAVANA	exon	15569801	15570898	.	-	.	gene_id "ENSMUSG00000102582.1"; transcript_id "ENSMUST00000192310.1"; gene_type "lincRNA"; gene_name "Gm37440"; transcript_type "lincRNA"; transcript_name "Gm37440-201"; exon_number 2; exon_id "ENSMUSE00001343896.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050471.1"; havana_transcript "OTTMUST00000128054.1";
mm10-chrY	HAVANA	gene	15615108	15615801	.	-	.	gene_id "ENSMUSG00000103666.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38185"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050478.1";
mm10-chrY	HAVANA	transcript	15615108	15615801	.	-	.	gene_id "ENSMUSG00000103666.1"; transcript_id "ENSMUST00000193195.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38185"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38185-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050478.1"; havana_transcript "OTTMUST00000128068.1";
mm10-chrY	HAVANA	exon	15615108	15615801	.	-	.	gene_id "ENSMUSG00000103666.1"; transcript_id "ENSMUST00000193195.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38185"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38185-201"; exon_number 1; exon_id "ENSMUSE00001340425.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050478.1"; havana_transcript "OTTMUST00000128068.1";
mm10-chrY	HAVANA	gene	15694983	15695679	.	-	.	gene_id "ENSMUSG00000104207.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37395"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050479.1";
mm10-chrY	HAVANA	transcript	15694983	15695679	.	-	.	gene_id "ENSMUSG00000104207.1"; transcript_id "ENSMUST00000194721.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37395"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37395-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050479.1"; havana_transcript "OTTMUST00000128069.1";
mm10-chrY	HAVANA	exon	15694983	15695679	.	-	.	gene_id "ENSMUSG00000104207.1"; transcript_id "ENSMUST00000194721.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37395"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37395-201"; exon_number 1; exon_id "ENSMUSE00001341597.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050479.1"; havana_transcript "OTTMUST00000128069.1";
mm10-chrY	HAVANA	gene	15734796	15737530	.	+	.	gene_id "ENSMUSG00000102392.5"; gene_type "lincRNA"; gene_name "Gm37577"; level 2; havana_gene "OTTMUSG00000050480.1";
mm10-chrY	HAVANA	transcript	15734796	15737107	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000191812.5"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128070.1";
mm10-chrY	HAVANA	exon	15734796	15734925	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000191812.5"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-201"; exon_number 1; exon_id "ENSMUSE00001342275.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128070.1";
mm10-chrY	HAVANA	exon	15735413	15735594	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000191812.5"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-201"; exon_number 2; exon_id "ENSMUSE00001338202.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128070.1";
mm10-chrY	HAVANA	exon	15736328	15736510	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000191812.5"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-201"; exon_number 3; exon_id "ENSMUSE00001344698.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128070.1";
mm10-chrY	HAVANA	exon	15737039	15737107	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000191812.5"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-201"; exon_number 4; exon_id "ENSMUSE00001340713.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128070.1";
mm10-chrY	HAVANA	transcript	15734796	15737107	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000191969.5"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128071.1";
mm10-chrY	HAVANA	exon	15734796	15734925	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000191969.5"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-202"; exon_number 1; exon_id "ENSMUSE00001342275.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128071.1";
mm10-chrY	HAVANA	exon	15735413	15735594	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000191969.5"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-202"; exon_number 2; exon_id "ENSMUSE00001338202.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128071.1";
mm10-chrY	HAVANA	exon	15737039	15737107	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000191969.5"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-202"; exon_number 3; exon_id "ENSMUSE00001340713.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128071.1";
mm10-chrY	HAVANA	transcript	15734796	15737530	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000194712.1"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128072.1";
mm10-chrY	HAVANA	exon	15734796	15734925	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000194712.1"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-203"; exon_number 1; exon_id "ENSMUSE00001342275.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128072.1";
mm10-chrY	HAVANA	exon	15735409	15735594	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000194712.1"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-203"; exon_number 2; exon_id "ENSMUSE00001341853.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128072.1";
mm10-chrY	HAVANA	exon	15736328	15736510	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000194712.1"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-203"; exon_number 3; exon_id "ENSMUSE00001344698.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128072.1";
mm10-chrY	HAVANA	exon	15737039	15737530	.	+	.	gene_id "ENSMUSG00000102392.5"; transcript_id "ENSMUST00000194712.1"; gene_type "lincRNA"; gene_name "Gm37577"; transcript_type "lincRNA"; transcript_name "Gm37577-203"; exon_number 4; exon_id "ENSMUSE00001336209.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050480.1"; havana_transcript "OTTMUST00000128072.1";
mm10-chrY	HAVANA	gene	15882421	15884771	.	-	.	gene_id "ENSMUSG00000095172.2"; gene_type "protein_coding"; gene_name "Gm20822"; level 2; havana_gene "OTTMUSG00000049720.1";
mm10-chrY	HAVANA	transcript	15882421	15884771	.	-	.	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000188422.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-202"; level 2; protein_id "ENSMUSP00000139707.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1"; havana_transcript "OTTMUST00000126663.1";
mm10-chrY	HAVANA	exon	15884649	15884771	.	-	.	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000188422.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-202"; exon_number 1; exon_id "ENSMUSE00001334833.1"; level 2; protein_id "ENSMUSP00000139707.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1"; havana_transcript "OTTMUST00000126663.1";
mm10-chrY	HAVANA	exon	15882421	15883526	.	-	.	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000188422.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-202"; exon_number 2; exon_id "ENSMUSE00001324086.1"; level 2; protein_id "ENSMUSP00000139707.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1"; havana_transcript "OTTMUST00000126663.1";
mm10-chrY	HAVANA	CDS	15882562	15883245	.	-	0	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000188422.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-202"; exon_number 2; exon_id "ENSMUSE00001324086.1"; level 2; protein_id "ENSMUSP00000139707.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1"; havana_transcript "OTTMUST00000126663.1";
mm10-chrY	HAVANA	start_codon	15883243	15883245	.	-	0	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000188422.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-202"; exon_number 2; exon_id "ENSMUSE00001324086.1"; level 2; protein_id "ENSMUSP00000139707.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1"; havana_transcript "OTTMUST00000126663.1";
mm10-chrY	HAVANA	stop_codon	15882559	15882561	.	-	0	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000188422.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-202"; exon_number 2; exon_id "ENSMUSE00001324086.1"; level 2; protein_id "ENSMUSP00000139707.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1"; havana_transcript "OTTMUST00000126663.1";
mm10-chrY	HAVANA	UTR	15884649	15884771	.	-	.	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000188422.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-202"; exon_number 1; exon_id "ENSMUSE00001334833.1"; level 2; protein_id "ENSMUSP00000139707.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1"; havana_transcript "OTTMUST00000126663.1";
mm10-chrY	HAVANA	UTR	15882421	15882561	.	-	.	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000188422.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-202"; exon_number 2; exon_id "ENSMUSE00001324086.1"; level 2; protein_id "ENSMUSP00000139707.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1"; havana_transcript "OTTMUST00000126663.1";
mm10-chrY	HAVANA	UTR	15883246	15883526	.	-	.	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000188422.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-202"; exon_number 2; exon_id "ENSMUSE00001324086.1"; level 2; protein_id "ENSMUSP00000139707.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1"; havana_transcript "OTTMUST00000126663.1";
mm10-chrY	ENSEMBL	transcript	15882559	15883245	.	-	.	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000165756.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-201"; level 3; protein_id "ENSMUSP00000130886.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1";
mm10-chrY	ENSEMBL	exon	15882559	15883245	.	-	.	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000165756.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-201"; exon_number 1; exon_id "ENSMUSE00001031473.1"; level 3; protein_id "ENSMUSP00000130886.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1";
mm10-chrY	ENSEMBL	CDS	15882562	15883245	.	-	0	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000165756.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-201"; exon_number 1; exon_id "ENSMUSE00001031473.1"; level 3; protein_id "ENSMUSP00000130886.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1";
mm10-chrY	ENSEMBL	start_codon	15883243	15883245	.	-	0	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000165756.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-201"; exon_number 1; exon_id "ENSMUSE00001031473.1"; level 3; protein_id "ENSMUSP00000130886.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1";
mm10-chrY	ENSEMBL	stop_codon	15882559	15882561	.	-	0	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000165756.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-201"; exon_number 1; exon_id "ENSMUSE00001031473.1"; level 3; protein_id "ENSMUSP00000130886.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1";
mm10-chrY	ENSEMBL	UTR	15882559	15882561	.	-	.	gene_id "ENSMUSG00000095172.2"; transcript_id "ENSMUST00000165756.1"; gene_type "protein_coding"; gene_name "Gm20822"; transcript_type "protein_coding"; transcript_name "Gm20822-201"; exon_number 1; exon_id "ENSMUSE00001031473.1"; level 3; protein_id "ENSMUSP00000130886.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85863.1"; havana_gene "OTTMUSG00000049720.1";
mm10-chrY	HAVANA	gene	16031250	16039572	.	-	.	gene_id "ENSMUSG00000102754.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38183"; level 2; havana_gene "OTTMUSG00000050489.1";
mm10-chrY	HAVANA	transcript	16031250	16039572	.	-	.	gene_id "ENSMUSG00000102754.1"; transcript_id "ENSMUST00000193189.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38183"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38183-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050489.1"; havana_transcript "OTTMUST00000128088.1";
mm10-chrY	HAVANA	exon	16039505	16039572	.	-	.	gene_id "ENSMUSG00000102754.1"; transcript_id "ENSMUST00000193189.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38183"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38183-201"; exon_number 1; exon_id "ENSMUSE00001342406.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050489.1"; havana_transcript "OTTMUST00000128088.1";
mm10-chrY	HAVANA	exon	16038922	16038956	.	-	.	gene_id "ENSMUSG00000102754.1"; transcript_id "ENSMUST00000193189.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38183"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38183-201"; exon_number 2; exon_id "ENSMUSE00001339297.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050489.1"; havana_transcript "OTTMUST00000128088.1";
mm10-chrY	HAVANA	exon	16031846	16031912	.	-	.	gene_id "ENSMUSG00000102754.1"; transcript_id "ENSMUST00000193189.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38183"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38183-201"; exon_number 3; exon_id "ENSMUSE00001338869.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050489.1"; havana_transcript "OTTMUST00000128088.1";
mm10-chrY	HAVANA	exon	16031250	16031284	.	-	.	gene_id "ENSMUSG00000102754.1"; transcript_id "ENSMUST00000193189.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38183"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38183-201"; exon_number 4; exon_id "ENSMUSE00001340197.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050489.1"; havana_transcript "OTTMUST00000128088.1";
mm10-chrY	HAVANA	gene	16092783	16112032	.	-	.	gene_id "ENSMUSG00000103167.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38149"; level 2; havana_gene "OTTMUSG00000050490.1";
mm10-chrY	HAVANA	transcript	16092783	16112032	.	-	.	gene_id "ENSMUSG00000103167.1"; transcript_id "ENSMUST00000191943.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38149"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38149-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050490.1"; havana_transcript "OTTMUST00000128089.1";
mm10-chrY	HAVANA	exon	16111924	16112032	.	-	.	gene_id "ENSMUSG00000103167.1"; transcript_id "ENSMUST00000191943.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38149"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38149-201"; exon_number 1; exon_id "ENSMUSE00001339635.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050490.1"; havana_transcript "OTTMUST00000128089.1";
mm10-chrY	HAVANA	exon	16101039	16101105	.	-	.	gene_id "ENSMUSG00000103167.1"; transcript_id "ENSMUST00000191943.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38149"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38149-201"; exon_number 2; exon_id "ENSMUSE00001336586.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050490.1"; havana_transcript "OTTMUST00000128089.1";
mm10-chrY	HAVANA	exon	16100465	16100499	.	-	.	gene_id "ENSMUSG00000103167.1"; transcript_id "ENSMUST00000191943.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38149"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38149-201"; exon_number 3; exon_id "ENSMUSE00001345359.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050490.1"; havana_transcript "OTTMUST00000128089.1";
mm10-chrY	HAVANA	exon	16093404	16093470	.	-	.	gene_id "ENSMUSG00000103167.1"; transcript_id "ENSMUST00000191943.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38149"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38149-201"; exon_number 4; exon_id "ENSMUSE00001345024.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050490.1"; havana_transcript "OTTMUST00000128089.1";
mm10-chrY	HAVANA	exon	16092783	16092843	.	-	.	gene_id "ENSMUSG00000103167.1"; transcript_id "ENSMUST00000191943.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38149"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38149-201"; exon_number 5; exon_id "ENSMUSE00001337810.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050490.1"; havana_transcript "OTTMUST00000128089.1";
mm10-chrY	HAVANA	gene	16151241	16151933	.	+	.	gene_id "ENSMUSG00000102387.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38145"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050491.1";
mm10-chrY	HAVANA	transcript	16151241	16151933	.	+	.	gene_id "ENSMUSG00000102387.1"; transcript_id "ENSMUST00000192319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38145"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38145-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050491.1"; havana_transcript "OTTMUST00000128090.1";
mm10-chrY	HAVANA	exon	16151241	16151933	.	+	.	gene_id "ENSMUSG00000102387.1"; transcript_id "ENSMUST00000192319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38145"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38145-201"; exon_number 1; exon_id "ENSMUSE00001343336.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050491.1"; havana_transcript "OTTMUST00000128090.1";
mm10-chrY	HAVANA	gene	16367090	16393523	.	+	.	gene_id "ENSMUSG00000102208.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32033"; level 2; havana_gene "OTTMUSG00000050492.1";
mm10-chrY	HAVANA	transcript	16367090	16393523	.	+	.	gene_id "ENSMUSG00000102208.1"; transcript_id "ENSMUST00000193483.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32033"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32033-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050492.1"; havana_transcript "OTTMUST00000128091.1";
mm10-chrY	HAVANA	exon	16367090	16367198	.	+	.	gene_id "ENSMUSG00000102208.1"; transcript_id "ENSMUST00000193483.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32033"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32033-201"; exon_number 1; exon_id "ENSMUSE00001339538.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050492.1"; havana_transcript "OTTMUST00000128091.1";
mm10-chrY	HAVANA	exon	16384676	16384742	.	+	.	gene_id "ENSMUSG00000102208.1"; transcript_id "ENSMUST00000193483.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32033"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32033-201"; exon_number 2; exon_id "ENSMUSE00001343159.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050492.1"; havana_transcript "OTTMUST00000128091.1";
mm10-chrY	HAVANA	exon	16385284	16385318	.	+	.	gene_id "ENSMUSG00000102208.1"; transcript_id "ENSMUST00000193483.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32033"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32033-201"; exon_number 3; exon_id "ENSMUSE00001341075.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050492.1"; havana_transcript "OTTMUST00000128091.1";
mm10-chrY	HAVANA	exon	16392831	16392897	.	+	.	gene_id "ENSMUSG00000102208.1"; transcript_id "ENSMUST00000193483.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32033"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32033-201"; exon_number 4; exon_id "ENSMUSE00001338506.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050492.1"; havana_transcript "OTTMUST00000128091.1";
mm10-chrY	HAVANA	exon	16393463	16393523	.	+	.	gene_id "ENSMUSG00000102208.1"; transcript_id "ENSMUST00000193483.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32033"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32033-201"; exon_number 5; exon_id "ENSMUSE00001345420.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050492.1"; havana_transcript "OTTMUST00000128091.1";
mm10-chrY	HAVANA	gene	16449293	16449989	.	-	.	gene_id "ENSMUSG00000102265.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32447"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050493.1";
mm10-chrY	HAVANA	transcript	16449293	16449989	.	-	.	gene_id "ENSMUSG00000102265.1"; transcript_id "ENSMUST00000194265.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32447"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32447-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050493.1"; havana_transcript "OTTMUST00000128092.1";
mm10-chrY	HAVANA	exon	16449293	16449989	.	-	.	gene_id "ENSMUSG00000102265.1"; transcript_id "ENSMUST00000194265.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32447"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32447-201"; exon_number 1; exon_id "ENSMUSE00001343746.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050493.1"; havana_transcript "OTTMUST00000128092.1";
mm10-chrY	HAVANA	gene	16485909	16486602	.	-	.	gene_id "ENSMUSG00000104490.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20770"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050494.1";
mm10-chrY	HAVANA	transcript	16485909	16486602	.	-	.	gene_id "ENSMUSG00000104490.1"; transcript_id "ENSMUST00000193474.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20770"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20770-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050494.1"; havana_transcript "OTTMUST00000128093.1";
mm10-chrY	HAVANA	exon	16485909	16486602	.	-	.	gene_id "ENSMUSG00000104490.1"; transcript_id "ENSMUST00000193474.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20770"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20770-201"; exon_number 1; exon_id "ENSMUSE00001344009.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050494.1"; havana_transcript "OTTMUST00000128093.1";
mm10-chrY	HAVANA	gene	16614136	16614828	.	-	.	gene_id "ENSMUSG00000103112.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38016"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050423.1";
mm10-chrY	HAVANA	transcript	16614136	16614828	.	-	.	gene_id "ENSMUSG00000103112.1"; transcript_id "ENSMUST00000194806.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38016"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38016-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050423.1"; havana_transcript "OTTMUST00000127951.1";
mm10-chrY	HAVANA	exon	16614136	16614828	.	-	.	gene_id "ENSMUSG00000103112.1"; transcript_id "ENSMUST00000194806.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38016"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38016-201"; exon_number 1; exon_id "ENSMUSE00001344866.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050423.1"; havana_transcript "OTTMUST00000127951.1";
mm10-chrY	HAVANA	gene	16691330	16697033	.	-	.	gene_id "ENSMUSG00000103234.1"; gene_type "TEC"; gene_name "Gm37158"; level 2; havana_gene "OTTMUSG00000050424.1";
mm10-chrY	HAVANA	transcript	16691330	16697033	.	-	.	gene_id "ENSMUSG00000103234.1"; transcript_id "ENSMUST00000191652.1"; gene_type "TEC"; gene_name "Gm37158"; transcript_type "TEC"; transcript_name "Gm37158-201"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050424.1"; havana_transcript "OTTMUST00000127952.1";
mm10-chrY	HAVANA	exon	16691330	16697033	.	-	.	gene_id "ENSMUSG00000103234.1"; transcript_id "ENSMUST00000191652.1"; gene_type "TEC"; gene_name "Gm37158"; transcript_type "TEC"; transcript_name "Gm37158-201"; exon_number 1; exon_id "ENSMUSE00001342422.1"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050424.1"; havana_transcript "OTTMUST00000127952.1";
mm10-chrY	HAVANA	gene	16731147	16731850	.	-	.	gene_id "ENSMUSG00000102288.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36998"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050425.1";
mm10-chrY	HAVANA	transcript	16731147	16731850	.	-	.	gene_id "ENSMUSG00000102288.1"; transcript_id "ENSMUST00000193205.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36998"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36998-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050425.1"; havana_transcript "OTTMUST00000127953.1";
mm10-chrY	HAVANA	exon	16731147	16731850	.	-	.	gene_id "ENSMUSG00000102288.1"; transcript_id "ENSMUST00000193205.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36998"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36998-201"; exon_number 1; exon_id "ENSMUSE00001338778.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050425.1"; havana_transcript "OTTMUST00000127953.1";
mm10-chrY	HAVANA	gene	16887481	16888179	.	-	.	gene_id "ENSMUSG00000103417.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33112"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050426.1";
mm10-chrY	HAVANA	transcript	16887481	16888179	.	-	.	gene_id "ENSMUSG00000103417.1"; transcript_id "ENSMUST00000193971.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33112"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33112-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "not_best_in_genome_evidence"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050426.1"; havana_transcript "OTTMUST00000127954.1";
mm10-chrY	HAVANA	exon	16887481	16888179	.	-	.	gene_id "ENSMUSG00000103417.1"; transcript_id "ENSMUST00000193971.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33112"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33112-201"; exon_number 1; exon_id "ENSMUSE00001336801.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "not_best_in_genome_evidence"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050426.1"; havana_transcript "OTTMUST00000127954.1";
mm10-chrY	HAVANA	gene	16923785	16924282	.	+	.	gene_id "ENSMUSG00000094829.2"; gene_type "lincRNA"; gene_name "Gm21809"; level 2; havana_gene "OTTMUSG00000050427.1";
mm10-chrY	HAVANA	transcript	16923785	16924282	.	+	.	gene_id "ENSMUSG00000094829.2"; transcript_id "ENSMUST00000194072.1"; gene_type "lincRNA"; gene_name "Gm21809"; transcript_type "lincRNA"; transcript_name "Gm21809-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050427.1"; havana_transcript "OTTMUST00000127955.1";
mm10-chrY	HAVANA	exon	16923785	16923889	.	+	.	gene_id "ENSMUSG00000094829.2"; transcript_id "ENSMUST00000194072.1"; gene_type "lincRNA"; gene_name "Gm21809"; transcript_type "lincRNA"; transcript_name "Gm21809-202"; exon_number 1; exon_id "ENSMUSE00001343176.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050427.1"; havana_transcript "OTTMUST00000127955.1";
mm10-chrY	HAVANA	exon	16924214	16924282	.	+	.	gene_id "ENSMUSG00000094829.2"; transcript_id "ENSMUST00000194072.1"; gene_type "lincRNA"; gene_name "Gm21809"; transcript_type "lincRNA"; transcript_name "Gm21809-202"; exon_number 2; exon_id "ENSMUSE00001346203.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050427.1"; havana_transcript "OTTMUST00000127955.1";
mm10-chrY	ENSEMBL	transcript	16923791	16924258	.	+	.	gene_id "ENSMUSG00000094829.2"; transcript_id "ENSMUST00000178495.1"; gene_type "lincRNA"; gene_name "Gm21809"; transcript_type "lincRNA"; transcript_name "Gm21809-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000050427.1";
mm10-chrY	ENSEMBL	exon	16923791	16924258	.	+	.	gene_id "ENSMUSG00000094829.2"; transcript_id "ENSMUST00000178495.1"; gene_type "lincRNA"; gene_name "Gm21809"; transcript_type "lincRNA"; transcript_name "Gm21809-201"; exon_number 1; exon_id "ENSMUSE00001004502.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000050427.1";
mm10-chrY	HAVANA	gene	17002626	17018392	.	+	.	gene_id "ENSMUSG00000104510.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm34015"; level 2; havana_gene "OTTMUSG00000050428.1";
mm10-chrY	HAVANA	transcript	17002626	17018392	.	+	.	gene_id "ENSMUSG00000104510.1"; transcript_id "ENSMUST00000194908.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm34015"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm34015-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050428.1"; havana_transcript "OTTMUST00000127956.1";
mm10-chrY	HAVANA	exon	17002626	17002694	.	+	.	gene_id "ENSMUSG00000104510.1"; transcript_id "ENSMUST00000194908.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm34015"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm34015-201"; exon_number 1; exon_id "ENSMUSE00001339122.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050428.1"; havana_transcript "OTTMUST00000127956.1";
mm10-chrY	HAVANA	exon	17003262	17003296	.	+	.	gene_id "ENSMUSG00000104510.1"; transcript_id "ENSMUST00000194908.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm34015"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm34015-201"; exon_number 2; exon_id "ENSMUSE00001336507.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050428.1"; havana_transcript "OTTMUST00000127956.1";
mm10-chrY	HAVANA	exon	17010407	17010524	.	+	.	gene_id "ENSMUSG00000104510.1"; transcript_id "ENSMUST00000194908.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm34015"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm34015-201"; exon_number 3; exon_id "ENSMUSE00001344292.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050428.1"; havana_transcript "OTTMUST00000127956.1";
mm10-chrY	HAVANA	exon	17011455	17011554	.	+	.	gene_id "ENSMUSG00000104510.1"; transcript_id "ENSMUST00000194908.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm34015"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm34015-201"; exon_number 4; exon_id "ENSMUSE00001338967.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050428.1"; havana_transcript "OTTMUST00000127956.1";
mm10-chrY	HAVANA	exon	17017905	17018003	.	+	.	gene_id "ENSMUSG00000104510.1"; transcript_id "ENSMUST00000194908.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm34015"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm34015-201"; exon_number 5; exon_id "ENSMUSE00001343287.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050428.1"; havana_transcript "OTTMUST00000127956.1";
mm10-chrY	HAVANA	exon	17018363	17018392	.	+	.	gene_id "ENSMUSG00000104510.1"; transcript_id "ENSMUST00000194908.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm34015"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm34015-201"; exon_number 6; exon_id "ENSMUSE00001342872.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050428.1"; havana_transcript "OTTMUST00000127956.1";
mm10-chrY	HAVANA	gene	17093873	17095892	.	+	.	gene_id "ENSMUSG00000095520.2"; gene_type "protein_coding"; gene_name "Gm20877"; level 2; havana_gene "OTTMUSG00000049721.1";
mm10-chrY	HAVANA	transcript	17093873	17095892	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000191358.1"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-202"; level 2; protein_id "ENSMUSP00000139965.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1"; havana_transcript "OTTMUST00000126664.1";
mm10-chrY	HAVANA	exon	17093873	17093994	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000191358.1"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-202"; exon_number 1; exon_id "ENSMUSE00001318622.1"; level 2; protein_id "ENSMUSP00000139965.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1"; havana_transcript "OTTMUST00000126664.1";
mm10-chrY	HAVANA	exon	17094793	17095892	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000191358.1"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-202"; exon_number 2; exon_id "ENSMUSE00001325335.1"; level 2; protein_id "ENSMUSP00000139965.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1"; havana_transcript "OTTMUST00000126664.1";
mm10-chrY	HAVANA	CDS	17095074	17095754	.	+	0	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000191358.1"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-202"; exon_number 2; exon_id "ENSMUSE00001325335.1"; level 2; protein_id "ENSMUSP00000139965.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1"; havana_transcript "OTTMUST00000126664.1";
mm10-chrY	HAVANA	start_codon	17095074	17095076	.	+	0	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000191358.1"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-202"; exon_number 2; exon_id "ENSMUSE00001325335.1"; level 2; protein_id "ENSMUSP00000139965.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1"; havana_transcript "OTTMUST00000126664.1";
mm10-chrY	HAVANA	stop_codon	17095755	17095757	.	+	0	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000191358.1"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-202"; exon_number 2; exon_id "ENSMUSE00001325335.1"; level 2; protein_id "ENSMUSP00000139965.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1"; havana_transcript "OTTMUST00000126664.1";
mm10-chrY	HAVANA	UTR	17093873	17093994	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000191358.1"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-202"; exon_number 1; exon_id "ENSMUSE00001318622.1"; level 2; protein_id "ENSMUSP00000139965.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1"; havana_transcript "OTTMUST00000126664.1";
mm10-chrY	HAVANA	UTR	17094793	17095073	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000191358.1"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-202"; exon_number 2; exon_id "ENSMUSE00001325335.1"; level 2; protein_id "ENSMUSP00000139965.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1"; havana_transcript "OTTMUST00000126664.1";
mm10-chrY	HAVANA	UTR	17095755	17095892	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000191358.1"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-202"; exon_number 2; exon_id "ENSMUSE00001325335.1"; level 2; protein_id "ENSMUSP00000139965.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1"; havana_transcript "OTTMUST00000126664.1";
mm10-chrY	ENSEMBL	transcript	17093879	17095887	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000100105.4"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-201"; level 3; protein_id "ENSMUSP00000097682.4"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1";
mm10-chrY	ENSEMBL	exon	17093879	17093998	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000100105.4"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-201"; exon_number 1; exon_id "ENSMUSE00001088142.1"; level 3; protein_id "ENSMUSP00000097682.4"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1";
mm10-chrY	ENSEMBL	exon	17094796	17095887	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000100105.4"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-201"; exon_number 2; exon_id "ENSMUSE00000970785.1"; level 3; protein_id "ENSMUSP00000097682.4"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1";
mm10-chrY	ENSEMBL	CDS	17095074	17095754	.	+	0	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000100105.4"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-201"; exon_number 2; exon_id "ENSMUSE00000970785.1"; level 3; protein_id "ENSMUSP00000097682.4"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1";
mm10-chrY	ENSEMBL	start_codon	17095074	17095076	.	+	0	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000100105.4"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-201"; exon_number 2; exon_id "ENSMUSE00000970785.1"; level 3; protein_id "ENSMUSP00000097682.4"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1";
mm10-chrY	ENSEMBL	stop_codon	17095755	17095757	.	+	0	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000100105.4"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-201"; exon_number 2; exon_id "ENSMUSE00000970785.1"; level 3; protein_id "ENSMUSP00000097682.4"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1";
mm10-chrY	ENSEMBL	UTR	17093879	17093998	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000100105.4"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-201"; exon_number 1; exon_id "ENSMUSE00001088142.1"; level 3; protein_id "ENSMUSP00000097682.4"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1";
mm10-chrY	ENSEMBL	UTR	17094796	17095073	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000100105.4"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-201"; exon_number 2; exon_id "ENSMUSE00000970785.1"; level 3; protein_id "ENSMUSP00000097682.4"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1";
mm10-chrY	ENSEMBL	UTR	17095755	17095887	.	+	.	gene_id "ENSMUSG00000095520.2"; transcript_id "ENSMUST00000100105.4"; gene_type "protein_coding"; gene_name "Gm20877"; transcript_type "protein_coding"; transcript_name "Gm20877-201"; exon_number 2; exon_id "ENSMUSE00000970785.1"; level 3; protein_id "ENSMUSP00000097682.4"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85864.1"; havana_gene "OTTMUSG00000049721.1";
mm10-chrY	HAVANA	gene	17130890	17131588	.	+	.	gene_id "ENSMUSG00000103602.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33191"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050429.1";
mm10-chrY	HAVANA	transcript	17130890	17131588	.	+	.	gene_id "ENSMUSG00000103602.1"; transcript_id "ENSMUST00000195604.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33191-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050429.1"; havana_transcript "OTTMUST00000127957.1";
mm10-chrY	HAVANA	exon	17130890	17131588	.	+	.	gene_id "ENSMUSG00000103602.1"; transcript_id "ENSMUST00000195604.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33191-201"; exon_number 1; exon_id "ENSMUSE00001339920.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050429.1"; havana_transcript "OTTMUST00000127957.1";
mm10-chrY	HAVANA	gene	17225447	17228678	.	-	.	gene_id "ENSMUSG00000102586.5"; gene_type "lincRNA"; gene_name "Gm38003"; level 2; havana_gene "OTTMUSG00000050430.1";
mm10-chrY	HAVANA	transcript	17225447	17228678	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000191968.5"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127958.1";
mm10-chrY	HAVANA	exon	17228039	17228678	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000191968.5"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-201"; exon_number 1; exon_id "ENSMUSE00001345059.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127958.1";
mm10-chrY	HAVANA	exon	17227368	17227553	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000191968.5"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-201"; exon_number 2; exon_id "ENSMUSE00001336924.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127958.1";
mm10-chrY	HAVANA	exon	17226468	17226651	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000191968.5"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-201"; exon_number 3; exon_id "ENSMUSE00001336596.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127958.1";
mm10-chrY	HAVANA	exon	17225447	17225940	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000191968.5"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-201"; exon_number 4; exon_id "ENSMUSE00001342590.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127958.1";
mm10-chrY	HAVANA	transcript	17225872	17228224	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000194569.5"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127959.1";
mm10-chrY	HAVANA	exon	17228039	17228224	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000194569.5"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-203"; exon_number 1; exon_id "ENSMUSE00001337607.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127959.1";
mm10-chrY	HAVANA	exon	17227368	17227549	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000194569.5"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-203"; exon_number 2; exon_id "ENSMUSE00001339004.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127959.1";
mm10-chrY	HAVANA	exon	17225872	17225940	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000194569.5"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-203"; exon_number 3; exon_id "ENSMUSE00001340431.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127959.1";
mm10-chrY	HAVANA	transcript	17225872	17228224	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000194080.1"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127960.1";
mm10-chrY	HAVANA	exon	17228039	17228224	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000194080.1"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-202"; exon_number 1; exon_id "ENSMUSE00001337607.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127960.1";
mm10-chrY	HAVANA	exon	17227368	17227549	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000194080.1"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-202"; exon_number 2; exon_id "ENSMUSE00001339004.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127960.1";
mm10-chrY	HAVANA	exon	17226468	17226651	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000194080.1"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-202"; exon_number 3; exon_id "ENSMUSE00001336596.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127960.1";
mm10-chrY	HAVANA	exon	17225872	17225940	.	-	.	gene_id "ENSMUSG00000102586.5"; transcript_id "ENSMUST00000194080.1"; gene_type "lincRNA"; gene_name "Gm38003"; transcript_type "lincRNA"; transcript_name "Gm38003-202"; exon_number 4; exon_id "ENSMUSE00001340431.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050430.1"; havana_transcript "OTTMUST00000127960.1";
mm10-chrY	HAVANA	gene	17275991	17276683	.	+	.	gene_id "ENSMUSG00000102170.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20781"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050431.1";
mm10-chrY	HAVANA	transcript	17275991	17276683	.	+	.	gene_id "ENSMUSG00000102170.1"; transcript_id "ENSMUST00000193154.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20781"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20781-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050431.1"; havana_transcript "OTTMUST00000127961.1";
mm10-chrY	HAVANA	exon	17275991	17276683	.	+	.	gene_id "ENSMUSG00000102170.1"; transcript_id "ENSMUST00000193154.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20781"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20781-201"; exon_number 1; exon_id "ENSMUSE00001336785.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050431.1"; havana_transcript "OTTMUST00000127961.1";
mm10-chrY	HAVANA	gene	17400761	17402715	.	+	.	gene_id "ENSMUSG00000095365.3"; gene_type "protein_coding"; gene_name "Rbm31y"; level 2; tag "retrogene"; havana_gene "OTTMUSG00000048981.2";
mm10-chrY	HAVANA	transcript	17400761	17402715	.	+	.	gene_id "ENSMUSG00000095365.3"; transcript_id "ENSMUST00000179408.2"; gene_type "protein_coding"; gene_name "Rbm31y"; transcript_type "protein_coding"; transcript_name "Rbm31y-201"; level 2; protein_id "ENSMUSP00000136781.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS57813.1"; havana_gene "OTTMUSG00000048981.2"; havana_transcript "OTTMUST00000125133.2";
mm10-chrY	HAVANA	exon	17400761	17402715	.	+	.	gene_id "ENSMUSG00000095365.3"; transcript_id "ENSMUST00000179408.2"; gene_type "protein_coding"; gene_name "Rbm31y"; transcript_type "protein_coding"; transcript_name "Rbm31y-201"; exon_number 1; exon_id "ENSMUSE00001333685.1"; level 2; protein_id "ENSMUSP00000136781.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS57813.1"; havana_gene "OTTMUSG00000048981.2"; havana_transcript "OTTMUST00000125133.2";
mm10-chrY	HAVANA	CDS	17400788	17402482	.	+	0	gene_id "ENSMUSG00000095365.3"; transcript_id "ENSMUST00000179408.2"; gene_type "protein_coding"; gene_name "Rbm31y"; transcript_type "protein_coding"; transcript_name "Rbm31y-201"; exon_number 1; exon_id "ENSMUSE00001333685.1"; level 2; protein_id "ENSMUSP00000136781.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS57813.1"; havana_gene "OTTMUSG00000048981.2"; havana_transcript "OTTMUST00000125133.2";
mm10-chrY	HAVANA	start_codon	17400788	17400790	.	+	0	gene_id "ENSMUSG00000095365.3"; transcript_id "ENSMUST00000179408.2"; gene_type "protein_coding"; gene_name "Rbm31y"; transcript_type "protein_coding"; transcript_name "Rbm31y-201"; exon_number 1; exon_id "ENSMUSE00001333685.1"; level 2; protein_id "ENSMUSP00000136781.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS57813.1"; havana_gene "OTTMUSG00000048981.2"; havana_transcript "OTTMUST00000125133.2";
mm10-chrY	HAVANA	stop_codon	17402483	17402485	.	+	0	gene_id "ENSMUSG00000095365.3"; transcript_id "ENSMUST00000179408.2"; gene_type "protein_coding"; gene_name "Rbm31y"; transcript_type "protein_coding"; transcript_name "Rbm31y-201"; exon_number 1; exon_id "ENSMUSE00001333685.1"; level 2; protein_id "ENSMUSP00000136781.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS57813.1"; havana_gene "OTTMUSG00000048981.2"; havana_transcript "OTTMUST00000125133.2";
mm10-chrY	HAVANA	UTR	17400761	17400787	.	+	.	gene_id "ENSMUSG00000095365.3"; transcript_id "ENSMUST00000179408.2"; gene_type "protein_coding"; gene_name "Rbm31y"; transcript_type "protein_coding"; transcript_name "Rbm31y-201"; exon_number 1; exon_id "ENSMUSE00001333685.1"; level 2; protein_id "ENSMUSP00000136781.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS57813.1"; havana_gene "OTTMUSG00000048981.2"; havana_transcript "OTTMUST00000125133.2";
mm10-chrY	HAVANA	UTR	17402483	17402715	.	+	.	gene_id "ENSMUSG00000095365.3"; transcript_id "ENSMUST00000179408.2"; gene_type "protein_coding"; gene_name "Rbm31y"; transcript_type "protein_coding"; transcript_name "Rbm31y-201"; exon_number 1; exon_id "ENSMUSE00001333685.1"; level 2; protein_id "ENSMUSP00000136781.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS57813.1"; havana_gene "OTTMUSG00000048981.2"; havana_transcript "OTTMUST00000125133.2";
mm10-chrY	HAVANA	gene	17596834	17597527	.	+	.	gene_id "ENSMUSG00000102421.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37325"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050432.1";
mm10-chrY	HAVANA	transcript	17596834	17597527	.	+	.	gene_id "ENSMUSG00000102421.1"; transcript_id "ENSMUST00000194971.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37325"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37325-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050432.1"; havana_transcript "OTTMUST00000127962.1";
mm10-chrY	HAVANA	exon	17596834	17597527	.	+	.	gene_id "ENSMUSG00000102421.1"; transcript_id "ENSMUST00000194971.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37325"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37325-201"; exon_number 1; exon_id "ENSMUSE00001343527.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050432.1"; havana_transcript "OTTMUST00000127962.1";
mm10-chrY	HAVANA	gene	17757509	17758204	.	+	.	gene_id "ENSMUSG00000104032.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20833"; level 2; havana_gene "OTTMUSG00000050433.1";
mm10-chrY	HAVANA	transcript	17757509	17758204	.	+	.	gene_id "ENSMUSG00000104032.1"; transcript_id "ENSMUST00000192708.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20833"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20833-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050433.1"; havana_transcript "OTTMUST00000127963.1";
mm10-chrY	HAVANA	exon	17757509	17758204	.	+	.	gene_id "ENSMUSG00000104032.1"; transcript_id "ENSMUST00000192708.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20833"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20833-201"; exon_number 1; exon_id "ENSMUSE00001345425.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050433.1"; havana_transcript "OTTMUST00000127963.1";
mm10-chrY	HAVANA	gene	17804545	17806904	.	-	.	gene_id "ENSMUSG00000102400.1"; gene_type "lincRNA"; gene_name "Gm37865"; level 2; havana_gene "OTTMUSG00000050434.1";
mm10-chrY	HAVANA	transcript	17804545	17806904	.	-	.	gene_id "ENSMUSG00000102400.1"; transcript_id "ENSMUST00000194996.1"; gene_type "lincRNA"; gene_name "Gm37865"; transcript_type "lincRNA"; transcript_name "Gm37865-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050434.1"; havana_transcript "OTTMUST00000127964.1";
mm10-chrY	HAVANA	exon	17806719	17806904	.	-	.	gene_id "ENSMUSG00000102400.1"; transcript_id "ENSMUST00000194996.1"; gene_type "lincRNA"; gene_name "Gm37865"; transcript_type "lincRNA"; transcript_name "Gm37865-201"; exon_number 1; exon_id "ENSMUSE00001345896.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050434.1"; havana_transcript "OTTMUST00000127964.1";
mm10-chrY	HAVANA	exon	17806051	17806232	.	-	.	gene_id "ENSMUSG00000102400.1"; transcript_id "ENSMUST00000194996.1"; gene_type "lincRNA"; gene_name "Gm37865"; transcript_type "lincRNA"; transcript_name "Gm37865-201"; exon_number 2; exon_id "ENSMUSE00001337437.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050434.1"; havana_transcript "OTTMUST00000127964.1";
mm10-chrY	HAVANA	exon	17804545	17804613	.	-	.	gene_id "ENSMUSG00000102400.1"; transcript_id "ENSMUST00000194996.1"; gene_type "lincRNA"; gene_name "Gm37865"; transcript_type "lincRNA"; transcript_name "Gm37865-201"; exon_number 3; exon_id "ENSMUSE00001341770.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050434.1"; havana_transcript "OTTMUST00000127964.1";
mm10-chrY	HAVANA	gene	17833041	17835401	.	-	.	gene_id "ENSMUSG00000102520.5"; gene_type "lincRNA"; gene_name "Gm36941"; level 2; havana_gene "OTTMUSG00000050435.1";
mm10-chrY	HAVANA	transcript	17833041	17835401	.	-	.	gene_id "ENSMUSG00000102520.5"; transcript_id "ENSMUST00000194799.5"; gene_type "lincRNA"; gene_name "Gm36941"; transcript_type "lincRNA"; transcript_name "Gm36941-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050435.1"; havana_transcript "OTTMUST00000127965.1";
mm10-chrY	HAVANA	exon	17835215	17835401	.	-	.	gene_id "ENSMUSG00000102520.5"; transcript_id "ENSMUST00000194799.5"; gene_type "lincRNA"; gene_name "Gm36941"; transcript_type "lincRNA"; transcript_name "Gm36941-202"; exon_number 1; exon_id "ENSMUSE00001346181.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050435.1"; havana_transcript "OTTMUST00000127965.1";
mm10-chrY	HAVANA	exon	17834545	17834726	.	-	.	gene_id "ENSMUSG00000102520.5"; transcript_id "ENSMUST00000194799.5"; gene_type "lincRNA"; gene_name "Gm36941"; transcript_type "lincRNA"; transcript_name "Gm36941-202"; exon_number 2; exon_id "ENSMUSE00001338145.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050435.1"; havana_transcript "OTTMUST00000127965.1";
mm10-chrY	HAVANA	exon	17833636	17833819	.	-	.	gene_id "ENSMUSG00000102520.5"; transcript_id "ENSMUST00000194799.5"; gene_type "lincRNA"; gene_name "Gm36941"; transcript_type "lincRNA"; transcript_name "Gm36941-202"; exon_number 3; exon_id "ENSMUSE00001342373.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050435.1"; havana_transcript "OTTMUST00000127965.1";
mm10-chrY	HAVANA	exon	17833041	17833108	.	-	.	gene_id "ENSMUSG00000102520.5"; transcript_id "ENSMUST00000194799.5"; gene_type "lincRNA"; gene_name "Gm36941"; transcript_type "lincRNA"; transcript_name "Gm36941-202"; exon_number 4; exon_id "ENSMUSE00001345868.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050435.1"; havana_transcript "OTTMUST00000127965.1";
mm10-chrY	HAVANA	transcript	17833041	17835401	.	-	.	gene_id "ENSMUSG00000102520.5"; transcript_id "ENSMUST00000193402.1"; gene_type "lincRNA"; gene_name "Gm36941"; transcript_type "lincRNA"; transcript_name "Gm36941-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050435.1"; havana_transcript "OTTMUST00000127966.1";
mm10-chrY	HAVANA	exon	17835215	17835401	.	-	.	gene_id "ENSMUSG00000102520.5"; transcript_id "ENSMUST00000193402.1"; gene_type "lincRNA"; gene_name "Gm36941"; transcript_type "lincRNA"; transcript_name "Gm36941-201"; exon_number 1; exon_id "ENSMUSE00001346181.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050435.1"; havana_transcript "OTTMUST00000127966.1";
mm10-chrY	HAVANA	exon	17834545	17834726	.	-	.	gene_id "ENSMUSG00000102520.5"; transcript_id "ENSMUST00000193402.1"; gene_type "lincRNA"; gene_name "Gm36941"; transcript_type "lincRNA"; transcript_name "Gm36941-201"; exon_number 2; exon_id "ENSMUSE00001338145.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050435.1"; havana_transcript "OTTMUST00000127966.1";
mm10-chrY	HAVANA	exon	17833041	17833108	.	-	.	gene_id "ENSMUSG00000102520.5"; transcript_id "ENSMUST00000193402.1"; gene_type "lincRNA"; gene_name "Gm36941"; transcript_type "lincRNA"; transcript_name "Gm36941-201"; exon_number 3; exon_id "ENSMUSE00001345868.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050435.1"; havana_transcript "OTTMUST00000127966.1";
mm10-chrY	ENSEMBL	gene	17845724	17846266	.	-	.	gene_id "ENSMUSG00000094161.1"; gene_type "protein_coding"; gene_name "Gm21904"; level 3;
mm10-chrY	ENSEMBL	transcript	17845724	17846266	.	-	.	gene_id "ENSMUSG00000094161.1"; transcript_id "ENSMUST00000179522.1"; gene_type "protein_coding"; gene_name "Gm21904"; transcript_type "protein_coding"; transcript_name "Gm21904-201"; level 3; protein_id "ENSMUSP00000136284.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	17845724	17846266	.	-	.	gene_id "ENSMUSG00000094161.1"; transcript_id "ENSMUST00000179522.1"; gene_type "protein_coding"; gene_name "Gm21904"; transcript_type "protein_coding"; transcript_name "Gm21904-201"; exon_number 1; exon_id "ENSMUSE00001038483.1"; level 3; protein_id "ENSMUSP00000136284.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	17845727	17846266	.	-	0	gene_id "ENSMUSG00000094161.1"; transcript_id "ENSMUST00000179522.1"; gene_type "protein_coding"; gene_name "Gm21904"; transcript_type "protein_coding"; transcript_name "Gm21904-201"; exon_number 1; exon_id "ENSMUSE00001038483.1"; level 3; protein_id "ENSMUSP00000136284.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	17846264	17846266	.	-	0	gene_id "ENSMUSG00000094161.1"; transcript_id "ENSMUST00000179522.1"; gene_type "protein_coding"; gene_name "Gm21904"; transcript_type "protein_coding"; transcript_name "Gm21904-201"; exon_number 1; exon_id "ENSMUSE00001038483.1"; level 3; protein_id "ENSMUSP00000136284.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	17845724	17845726	.	-	0	gene_id "ENSMUSG00000094161.1"; transcript_id "ENSMUST00000179522.1"; gene_type "protein_coding"; gene_name "Gm21904"; transcript_type "protein_coding"; transcript_name "Gm21904-201"; exon_number 1; exon_id "ENSMUSE00001038483.1"; level 3; protein_id "ENSMUSP00000136284.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	17845724	17845726	.	-	.	gene_id "ENSMUSG00000094161.1"; transcript_id "ENSMUST00000179522.1"; gene_type "protein_coding"; gene_name "Gm21904"; transcript_type "protein_coding"; transcript_name "Gm21904-201"; exon_number 1; exon_id "ENSMUSE00001038483.1"; level 3; protein_id "ENSMUSP00000136284.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	17867025	17870364	.	+	.	gene_id "ENSMUSG00000102726.1"; gene_type "lincRNA"; gene_name "Gm37937"; level 2; havana_gene "OTTMUSG00000050436.1";
mm10-chrY	HAVANA	transcript	17867025	17870364	.	+	.	gene_id "ENSMUSG00000102726.1"; transcript_id "ENSMUST00000194130.1"; gene_type "lincRNA"; gene_name "Gm37937"; transcript_type "lincRNA"; transcript_name "Gm37937-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000050436.1"; havana_transcript "OTTMUST00000127967.1";
mm10-chrY	HAVANA	exon	17867025	17867247	.	+	.	gene_id "ENSMUSG00000102726.1"; transcript_id "ENSMUST00000194130.1"; gene_type "lincRNA"; gene_name "Gm37937"; transcript_type "lincRNA"; transcript_name "Gm37937-201"; exon_number 1; exon_id "ENSMUSE00001341877.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000050436.1"; havana_transcript "OTTMUST00000127967.1";
mm10-chrY	HAVANA	exon	17868420	17870364	.	+	.	gene_id "ENSMUSG00000102726.1"; transcript_id "ENSMUST00000194130.1"; gene_type "lincRNA"; gene_name "Gm37937"; transcript_type "lincRNA"; transcript_name "Gm37937-201"; exon_number 2; exon_id "ENSMUSE00001340133.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000050436.1"; havana_transcript "OTTMUST00000127967.1";
mm10-chrY	HAVANA	gene	17874741	17877179	.	+	.	gene_id "ENSMUSG00000102739.1"; gene_type "protein_coding"; gene_name "Gm20772"; level 2; havana_gene "OTTMUSG00000049725.1";
mm10-chrY	HAVANA	transcript	17874741	17877179	.	+	.	gene_id "ENSMUSG00000102739.1"; transcript_id "ENSMUST00000188928.2"; gene_type "protein_coding"; gene_name "Gm20772"; transcript_type "protein_coding"; transcript_name "Gm20772-201"; level 2; protein_id "ENSMUSP00000139540.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049725.1"; havana_transcript "OTTMUST00000126675.1";
mm10-chrY	HAVANA	exon	17874741	17874931	.	+	.	gene_id "ENSMUSG00000102739.1"; transcript_id "ENSMUST00000188928.2"; gene_type "protein_coding"; gene_name "Gm20772"; transcript_type "protein_coding"; transcript_name "Gm20772-201"; exon_number 1; exon_id "ENSMUSE00001337373.1"; level 2; protein_id "ENSMUSP00000139540.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049725.1"; havana_transcript "OTTMUST00000126675.1";
mm10-chrY	HAVANA	exon	17875156	17875342	.	+	.	gene_id "ENSMUSG00000102739.1"; transcript_id "ENSMUST00000188928.2"; gene_type "protein_coding"; gene_name "Gm20772"; transcript_type "protein_coding"; transcript_name "Gm20772-201"; exon_number 2; exon_id "ENSMUSE00001319913.1"; level 2; protein_id "ENSMUSP00000139540.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049725.1"; havana_transcript "OTTMUST00000126675.1";
mm10-chrY	HAVANA	exon	17876215	17877179	.	+	.	gene_id "ENSMUSG00000102739.1"; transcript_id "ENSMUST00000188928.2"; gene_type "protein_coding"; gene_name "Gm20772"; transcript_type "protein_coding"; transcript_name "Gm20772-201"; exon_number 3; exon_id "ENSMUSE00001325244.1"; level 2; protein_id "ENSMUSP00000139540.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049725.1"; havana_transcript "OTTMUST00000126675.1";
mm10-chrY	HAVANA	CDS	17876355	17877050	.	+	0	gene_id "ENSMUSG00000102739.1"; transcript_id "ENSMUST00000188928.2"; gene_type "protein_coding"; gene_name "Gm20772"; transcript_type "protein_coding"; transcript_name "Gm20772-201"; exon_number 3; exon_id "ENSMUSE00001325244.1"; level 2; protein_id "ENSMUSP00000139540.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049725.1"; havana_transcript "OTTMUST00000126675.1";
mm10-chrY	HAVANA	start_codon	17876355	17876357	.	+	0	gene_id "ENSMUSG00000102739.1"; transcript_id "ENSMUST00000188928.2"; gene_type "protein_coding"; gene_name "Gm20772"; transcript_type "protein_coding"; transcript_name "Gm20772-201"; exon_number 3; exon_id "ENSMUSE00001325244.1"; level 2; protein_id "ENSMUSP00000139540.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049725.1"; havana_transcript "OTTMUST00000126675.1";
mm10-chrY	HAVANA	stop_codon	17877051	17877053	.	+	0	gene_id "ENSMUSG00000102739.1"; transcript_id "ENSMUST00000188928.2"; gene_type "protein_coding"; gene_name "Gm20772"; transcript_type "protein_coding"; transcript_name "Gm20772-201"; exon_number 3; exon_id "ENSMUSE00001325244.1"; level 2; protein_id "ENSMUSP00000139540.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049725.1"; havana_transcript "OTTMUST00000126675.1";
mm10-chrY	HAVANA	UTR	17874741	17874931	.	+	.	gene_id "ENSMUSG00000102739.1"; transcript_id "ENSMUST00000188928.2"; gene_type "protein_coding"; gene_name "Gm20772"; transcript_type "protein_coding"; transcript_name "Gm20772-201"; exon_number 1; exon_id "ENSMUSE00001337373.1"; level 2; protein_id "ENSMUSP00000139540.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049725.1"; havana_transcript "OTTMUST00000126675.1";
mm10-chrY	HAVANA	UTR	17875156	17875342	.	+	.	gene_id "ENSMUSG00000102739.1"; transcript_id "ENSMUST00000188928.2"; gene_type "protein_coding"; gene_name "Gm20772"; transcript_type "protein_coding"; transcript_name "Gm20772-201"; exon_number 2; exon_id "ENSMUSE00001319913.1"; level 2; protein_id "ENSMUSP00000139540.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049725.1"; havana_transcript "OTTMUST00000126675.1";
mm10-chrY	HAVANA	UTR	17876215	17876354	.	+	.	gene_id "ENSMUSG00000102739.1"; transcript_id "ENSMUST00000188928.2"; gene_type "protein_coding"; gene_name "Gm20772"; transcript_type "protein_coding"; transcript_name "Gm20772-201"; exon_number 3; exon_id "ENSMUSE00001325244.1"; level 2; protein_id "ENSMUSP00000139540.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049725.1"; havana_transcript "OTTMUST00000126675.1";
mm10-chrY	HAVANA	UTR	17877051	17877179	.	+	.	gene_id "ENSMUSG00000102739.1"; transcript_id "ENSMUST00000188928.2"; gene_type "protein_coding"; gene_name "Gm20772"; transcript_type "protein_coding"; transcript_name "Gm20772-201"; exon_number 3; exon_id "ENSMUSE00001325244.1"; level 2; protein_id "ENSMUSP00000139540.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049725.1"; havana_transcript "OTTMUST00000126675.1";
mm10-chrY	HAVANA	gene	17874741	17967603	.	+	.	gene_id "ENSMUSG00000094325.7"; gene_type "protein_coding"; gene_name "Gm20831"; level 2; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	ENSEMBL	transcript	17874741	17967596	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000177639.6"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-201"; level 3; protein_id "ENSMUSP00000136638.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	ENSEMBL	exon	17874741	17874931	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000177639.6"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-201"; exon_number 1; exon_id "ENSMUSE00001343344.1"; level 3; protein_id "ENSMUSP00000136638.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	ENSEMBL	exon	17965575	17965761	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000177639.6"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-201"; exon_number 2; exon_id "ENSMUSE00001027138.1"; level 3; protein_id "ENSMUSP00000136638.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	ENSEMBL	exon	17966638	17967596	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000177639.6"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-201"; exon_number 3; exon_id "ENSMUSE00001059215.1"; level 3; protein_id "ENSMUSP00000136638.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	ENSEMBL	CDS	17966778	17967473	.	+	0	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000177639.6"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-201"; exon_number 3; exon_id "ENSMUSE00001059215.1"; level 3; protein_id "ENSMUSP00000136638.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	ENSEMBL	start_codon	17966778	17966780	.	+	0	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000177639.6"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-201"; exon_number 3; exon_id "ENSMUSE00001059215.1"; level 3; protein_id "ENSMUSP00000136638.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	ENSEMBL	stop_codon	17967474	17967476	.	+	0	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000177639.6"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-201"; exon_number 3; exon_id "ENSMUSE00001059215.1"; level 3; protein_id "ENSMUSP00000136638.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	ENSEMBL	UTR	17874741	17874931	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000177639.6"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-201"; exon_number 1; exon_id "ENSMUSE00001343344.1"; level 3; protein_id "ENSMUSP00000136638.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	ENSEMBL	UTR	17965575	17965761	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000177639.6"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-201"; exon_number 2; exon_id "ENSMUSE00001027138.1"; level 3; protein_id "ENSMUSP00000136638.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	ENSEMBL	UTR	17966638	17966777	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000177639.6"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-201"; exon_number 3; exon_id "ENSMUSE00001059215.1"; level 3; protein_id "ENSMUSP00000136638.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	ENSEMBL	UTR	17967474	17967596	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000177639.6"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-201"; exon_number 3; exon_id "ENSMUSE00001059215.1"; level 3; protein_id "ENSMUSP00000136638.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1";
mm10-chrY	HAVANA	transcript	17965160	17967603	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000194411.1"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-202"; level 2; protein_id "ENSMUSP00000142081.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1"; havana_transcript "OTTMUST00000119081.1";
mm10-chrY	HAVANA	exon	17965160	17965350	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000194411.1"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-202"; exon_number 1; exon_id "ENSMUSE00001340337.1"; level 2; protein_id "ENSMUSP00000142081.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1"; havana_transcript "OTTMUST00000119081.1";
mm10-chrY	HAVANA	exon	17965575	17965761	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000194411.1"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-202"; exon_number 2; exon_id "ENSMUSE00001027138.1"; level 2; protein_id "ENSMUSP00000142081.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1"; havana_transcript "OTTMUST00000119081.1";
mm10-chrY	HAVANA	exon	17966638	17967603	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000194411.1"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-202"; exon_number 3; exon_id "ENSMUSE00001340986.1"; level 2; protein_id "ENSMUSP00000142081.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1"; havana_transcript "OTTMUST00000119081.1";
mm10-chrY	HAVANA	CDS	17966778	17967473	.	+	0	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000194411.1"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-202"; exon_number 3; exon_id "ENSMUSE00001340986.1"; level 2; protein_id "ENSMUSP00000142081.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1"; havana_transcript "OTTMUST00000119081.1";
mm10-chrY	HAVANA	start_codon	17966778	17966780	.	+	0	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000194411.1"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-202"; exon_number 3; exon_id "ENSMUSE00001340986.1"; level 2; protein_id "ENSMUSP00000142081.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1"; havana_transcript "OTTMUST00000119081.1";
mm10-chrY	HAVANA	stop_codon	17967474	17967476	.	+	0	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000194411.1"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-202"; exon_number 3; exon_id "ENSMUSE00001340986.1"; level 2; protein_id "ENSMUSP00000142081.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1"; havana_transcript "OTTMUST00000119081.1";
mm10-chrY	HAVANA	UTR	17965160	17965350	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000194411.1"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-202"; exon_number 1; exon_id "ENSMUSE00001340337.1"; level 2; protein_id "ENSMUSP00000142081.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1"; havana_transcript "OTTMUST00000119081.1";
mm10-chrY	HAVANA	UTR	17965575	17965761	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000194411.1"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-202"; exon_number 2; exon_id "ENSMUSE00001027138.1"; level 2; protein_id "ENSMUSP00000142081.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1"; havana_transcript "OTTMUST00000119081.1";
mm10-chrY	HAVANA	UTR	17966638	17966777	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000194411.1"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-202"; exon_number 3; exon_id "ENSMUSE00001340986.1"; level 2; protein_id "ENSMUSP00000142081.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1"; havana_transcript "OTTMUST00000119081.1";
mm10-chrY	HAVANA	UTR	17967474	17967603	.	+	.	gene_id "ENSMUSG00000094325.7"; transcript_id "ENSMUST00000194411.1"; gene_type "protein_coding"; gene_name "Gm20831"; transcript_type "protein_coding"; transcript_name "Gm20831-202"; exon_number 3; exon_id "ENSMUSE00001340986.1"; level 2; protein_id "ENSMUSP00000142081.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85866.1"; havana_gene "OTTMUSG00000045357.1"; havana_transcript "OTTMUST00000119081.1";
mm10-chrY	HAVANA	gene	17922928	17926162	.	-	.	gene_id "ENSMUSG00000103757.1"; gene_type "lincRNA"; gene_name "Gm37286"; level 2; havana_gene "OTTMUSG00000050437.1";
mm10-chrY	HAVANA	transcript	17922928	17926162	.	-	.	gene_id "ENSMUSG00000103757.1"; transcript_id "ENSMUST00000195885.1"; gene_type "lincRNA"; gene_name "Gm37286"; transcript_type "lincRNA"; transcript_name "Gm37286-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050437.1"; havana_transcript "OTTMUST00000127968.1";
mm10-chrY	HAVANA	exon	17925524	17926162	.	-	.	gene_id "ENSMUSG00000103757.1"; transcript_id "ENSMUST00000195885.1"; gene_type "lincRNA"; gene_name "Gm37286"; transcript_type "lincRNA"; transcript_name "Gm37286-201"; exon_number 1; exon_id "ENSMUSE00001337201.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050437.1"; havana_transcript "OTTMUST00000127968.1";
mm10-chrY	HAVANA	exon	17924855	17925040	.	-	.	gene_id "ENSMUSG00000103757.1"; transcript_id "ENSMUST00000195885.1"; gene_type "lincRNA"; gene_name "Gm37286"; transcript_type "lincRNA"; transcript_name "Gm37286-201"; exon_number 2; exon_id "ENSMUSE00001340189.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050437.1"; havana_transcript "OTTMUST00000127968.1";
mm10-chrY	HAVANA	exon	17923944	17924127	.	-	.	gene_id "ENSMUSG00000103757.1"; transcript_id "ENSMUST00000195885.1"; gene_type "lincRNA"; gene_name "Gm37286"; transcript_type "lincRNA"; transcript_name "Gm37286-201"; exon_number 3; exon_id "ENSMUSE00001344563.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050437.1"; havana_transcript "OTTMUST00000127968.1";
mm10-chrY	HAVANA	exon	17922928	17923417	.	-	.	gene_id "ENSMUSG00000103757.1"; transcript_id "ENSMUST00000195885.1"; gene_type "lincRNA"; gene_name "Gm37286"; transcript_type "lincRNA"; transcript_name "Gm37286-201"; exon_number 4; exon_id "ENSMUSE00001336644.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050437.1"; havana_transcript "OTTMUST00000127968.1";
mm10-chrY	ENSEMBL	gene	17935713	17937330	.	-	.	gene_id "ENSMUSG00000096819.1"; gene_type "protein_coding"; gene_name "Srsy"; level 3;
mm10-chrY	ENSEMBL	transcript	17935713	17937330	.	-	.	gene_id "ENSMUSG00000096819.1"; transcript_id "ENSMUST00000179900.1"; gene_type "protein_coding"; gene_name "Srsy"; transcript_type "protein_coding"; transcript_name "Srsy-201"; level 3; protein_id "ENSMUSP00000136342.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	17935713	17937330	.	-	.	gene_id "ENSMUSG00000096819.1"; transcript_id "ENSMUST00000179900.1"; gene_type "protein_coding"; gene_name "Srsy"; transcript_type "protein_coding"; transcript_name "Srsy-201"; exon_number 1; exon_id "ENSMUSE00001070755.1"; level 3; protein_id "ENSMUSP00000136342.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	17936152	17936691	.	-	0	gene_id "ENSMUSG00000096819.1"; transcript_id "ENSMUST00000179900.1"; gene_type "protein_coding"; gene_name "Srsy"; transcript_type "protein_coding"; transcript_name "Srsy-201"; exon_number 1; exon_id "ENSMUSE00001070755.1"; level 3; protein_id "ENSMUSP00000136342.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	17936689	17936691	.	-	0	gene_id "ENSMUSG00000096819.1"; transcript_id "ENSMUST00000179900.1"; gene_type "protein_coding"; gene_name "Srsy"; transcript_type "protein_coding"; transcript_name "Srsy-201"; exon_number 1; exon_id "ENSMUSE00001070755.1"; level 3; protein_id "ENSMUSP00000136342.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	17936149	17936151	.	-	0	gene_id "ENSMUSG00000096819.1"; transcript_id "ENSMUST00000179900.1"; gene_type "protein_coding"; gene_name "Srsy"; transcript_type "protein_coding"; transcript_name "Srsy-201"; exon_number 1; exon_id "ENSMUSE00001070755.1"; level 3; protein_id "ENSMUSP00000136342.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	17935713	17936151	.	-	.	gene_id "ENSMUSG00000096819.1"; transcript_id "ENSMUST00000179900.1"; gene_type "protein_coding"; gene_name "Srsy"; transcript_type "protein_coding"; transcript_name "Srsy-201"; exon_number 1; exon_id "ENSMUSE00001070755.1"; level 3; protein_id "ENSMUSP00000136342.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	17936692	17937330	.	-	.	gene_id "ENSMUSG00000096819.1"; transcript_id "ENSMUST00000179900.1"; gene_type "protein_coding"; gene_name "Srsy"; transcript_type "protein_coding"; transcript_name "Srsy-201"; exon_number 1; exon_id "ENSMUSE00001070755.1"; level 3; protein_id "ENSMUSP00000136342.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	17957447	17960787	.	+	.	gene_id "ENSMUSG00000103994.1"; gene_type "lincRNA"; gene_name "Gm38028"; level 2; havana_gene "OTTMUSG00000050438.1";
mm10-chrY	HAVANA	transcript	17957447	17960787	.	+	.	gene_id "ENSMUSG00000103994.1"; transcript_id "ENSMUST00000193309.1"; gene_type "lincRNA"; gene_name "Gm38028"; transcript_type "lincRNA"; transcript_name "Gm38028-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050438.1"; havana_transcript "OTTMUST00000127969.1";
mm10-chrY	HAVANA	exon	17957447	17957669	.	+	.	gene_id "ENSMUSG00000103994.1"; transcript_id "ENSMUST00000193309.1"; gene_type "lincRNA"; gene_name "Gm38028"; transcript_type "lincRNA"; transcript_name "Gm38028-201"; exon_number 1; exon_id "ENSMUSE00001342342.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050438.1"; havana_transcript "OTTMUST00000127969.1";
mm10-chrY	HAVANA	exon	17958842	17960787	.	+	.	gene_id "ENSMUSG00000103994.1"; transcript_id "ENSMUST00000193309.1"; gene_type "lincRNA"; gene_name "Gm38028"; transcript_type "lincRNA"; transcript_name "Gm38028-201"; exon_number 2; exon_id "ENSMUSE00001338695.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050438.1"; havana_transcript "OTTMUST00000127969.1";
mm10-chrY	ENSEMBL	gene	18061270	18061812	.	-	.	gene_id "ENSMUSG00000095879.1"; gene_type "protein_coding"; gene_name "Gm21764"; level 3;
mm10-chrY	ENSEMBL	transcript	18061270	18061812	.	-	.	gene_id "ENSMUSG00000095879.1"; transcript_id "ENSMUST00000179219.1"; gene_type "protein_coding"; gene_name "Gm21764"; transcript_type "protein_coding"; transcript_name "Gm21764-201"; level 3; protein_id "ENSMUSP00000136798.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	18061270	18061812	.	-	.	gene_id "ENSMUSG00000095879.1"; transcript_id "ENSMUST00000179219.1"; gene_type "protein_coding"; gene_name "Gm21764"; transcript_type "protein_coding"; transcript_name "Gm21764-201"; exon_number 1; exon_id "ENSMUSE00001092541.1"; level 3; protein_id "ENSMUSP00000136798.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	18061273	18061812	.	-	0	gene_id "ENSMUSG00000095879.1"; transcript_id "ENSMUST00000179219.1"; gene_type "protein_coding"; gene_name "Gm21764"; transcript_type "protein_coding"; transcript_name "Gm21764-201"; exon_number 1; exon_id "ENSMUSE00001092541.1"; level 3; protein_id "ENSMUSP00000136798.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	18061810	18061812	.	-	0	gene_id "ENSMUSG00000095879.1"; transcript_id "ENSMUST00000179219.1"; gene_type "protein_coding"; gene_name "Gm21764"; transcript_type "protein_coding"; transcript_name "Gm21764-201"; exon_number 1; exon_id "ENSMUSE00001092541.1"; level 3; protein_id "ENSMUSP00000136798.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	18061270	18061272	.	-	0	gene_id "ENSMUSG00000095879.1"; transcript_id "ENSMUST00000179219.1"; gene_type "protein_coding"; gene_name "Gm21764"; transcript_type "protein_coding"; transcript_name "Gm21764-201"; exon_number 1; exon_id "ENSMUSE00001092541.1"; level 3; protein_id "ENSMUSP00000136798.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	18061270	18061272	.	-	.	gene_id "ENSMUSG00000095879.1"; transcript_id "ENSMUST00000179219.1"; gene_type "protein_coding"; gene_name "Gm21764"; transcript_type "protein_coding"; transcript_name "Gm21764-201"; exon_number 1; exon_id "ENSMUSE00001092541.1"; level 3; protein_id "ENSMUSP00000136798.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	18089116	18091556	.	+	.	gene_id "ENSMUSG00000095267.2"; gene_type "protein_coding"; gene_name "Ssty1"; level 2; havana_gene "OTTMUSG00000049726.1";
mm10-chrY	HAVANA	transcript	18089116	18091556	.	+	.	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000186035.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-202"; level 2; protein_id "ENSMUSP00000139883.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1"; havana_transcript "OTTMUST00000126676.1";
mm10-chrY	HAVANA	exon	18089116	18089306	.	+	.	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000186035.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-202"; exon_number 1; exon_id "ENSMUSE00001324725.1"; level 2; protein_id "ENSMUSP00000139883.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1"; havana_transcript "OTTMUST00000126676.1";
mm10-chrY	HAVANA	exon	18089531	18089717	.	+	.	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000186035.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-202"; exon_number 2; exon_id "ENSMUSE00001325692.1"; level 2; protein_id "ENSMUSP00000139883.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1"; havana_transcript "OTTMUST00000126676.1";
mm10-chrY	HAVANA	exon	18090594	18091556	.	+	.	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000186035.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-202"; exon_number 3; exon_id "ENSMUSE00001329133.1"; level 2; protein_id "ENSMUSP00000139883.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1"; havana_transcript "OTTMUST00000126676.1";
mm10-chrY	HAVANA	CDS	18090734	18091429	.	+	0	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000186035.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-202"; exon_number 3; exon_id "ENSMUSE00001329133.1"; level 2; protein_id "ENSMUSP00000139883.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1"; havana_transcript "OTTMUST00000126676.1";
mm10-chrY	HAVANA	start_codon	18090734	18090736	.	+	0	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000186035.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-202"; exon_number 3; exon_id "ENSMUSE00001329133.1"; level 2; protein_id "ENSMUSP00000139883.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1"; havana_transcript "OTTMUST00000126676.1";
mm10-chrY	HAVANA	stop_codon	18091430	18091432	.	+	0	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000186035.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-202"; exon_number 3; exon_id "ENSMUSE00001329133.1"; level 2; protein_id "ENSMUSP00000139883.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1"; havana_transcript "OTTMUST00000126676.1";
mm10-chrY	HAVANA	UTR	18089116	18089306	.	+	.	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000186035.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-202"; exon_number 1; exon_id "ENSMUSE00001324725.1"; level 2; protein_id "ENSMUSP00000139883.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1"; havana_transcript "OTTMUST00000126676.1";
mm10-chrY	HAVANA	UTR	18089531	18089717	.	+	.	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000186035.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-202"; exon_number 2; exon_id "ENSMUSE00001325692.1"; level 2; protein_id "ENSMUSP00000139883.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1"; havana_transcript "OTTMUST00000126676.1";
mm10-chrY	HAVANA	UTR	18090594	18090733	.	+	.	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000186035.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-202"; exon_number 3; exon_id "ENSMUSE00001329133.1"; level 2; protein_id "ENSMUSP00000139883.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1"; havana_transcript "OTTMUST00000126676.1";
mm10-chrY	HAVANA	UTR	18091430	18091556	.	+	.	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000186035.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-202"; exon_number 3; exon_id "ENSMUSE00001329133.1"; level 2; protein_id "ENSMUSP00000139883.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1"; havana_transcript "OTTMUST00000126676.1";
mm10-chrY	ENSEMBL	transcript	18090734	18091432	.	+	.	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000180056.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-201"; level 3; protein_id "ENSMUSP00000137527.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1";
mm10-chrY	ENSEMBL	exon	18090734	18091432	.	+	.	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000180056.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-201"; exon_number 1; exon_id "ENSMUSE00001045242.1"; level 3; protein_id "ENSMUSP00000137527.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1";
mm10-chrY	ENSEMBL	CDS	18090734	18091429	.	+	0	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000180056.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-201"; exon_number 1; exon_id "ENSMUSE00001045242.1"; level 3; protein_id "ENSMUSP00000137527.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1";
mm10-chrY	ENSEMBL	start_codon	18090734	18090736	.	+	0	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000180056.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-201"; exon_number 1; exon_id "ENSMUSE00001045242.1"; level 3; protein_id "ENSMUSP00000137527.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1";
mm10-chrY	ENSEMBL	stop_codon	18091430	18091432	.	+	0	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000180056.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-201"; exon_number 1; exon_id "ENSMUSE00001045242.1"; level 3; protein_id "ENSMUSP00000137527.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1";
mm10-chrY	ENSEMBL	UTR	18091430	18091432	.	+	.	gene_id "ENSMUSG00000095267.2"; transcript_id "ENSMUST00000180056.1"; gene_type "protein_coding"; gene_name "Ssty1"; transcript_type "protein_coding"; transcript_name "Ssty1-201"; exon_number 1; exon_id "ENSMUSE00001045242.1"; level 3; protein_id "ENSMUSP00000137527.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85867.1"; havana_gene "OTTMUSG00000049726.1";
mm10-chrY	HAVANA	gene	18199139	18202472	.	+	.	gene_id "ENSMUSG00000103917.1"; gene_type "lincRNA"; gene_name "Gm38072"; level 2; havana_gene "OTTMUSG00000050391.1";
mm10-chrY	HAVANA	transcript	18199139	18202472	.	+	.	gene_id "ENSMUSG00000103917.1"; transcript_id "ENSMUST00000192127.1"; gene_type "lincRNA"; gene_name "Gm38072"; transcript_type "lincRNA"; transcript_name "Gm38072-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050391.1"; havana_transcript "OTTMUST00000127901.1";
mm10-chrY	HAVANA	exon	18199139	18199354	.	+	.	gene_id "ENSMUSG00000103917.1"; transcript_id "ENSMUST00000192127.1"; gene_type "lincRNA"; gene_name "Gm38072"; transcript_type "lincRNA"; transcript_name "Gm38072-201"; exon_number 1; exon_id "ENSMUSE00001343870.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050391.1"; havana_transcript "OTTMUST00000127901.1";
mm10-chrY	HAVANA	exon	18200527	18202472	.	+	.	gene_id "ENSMUSG00000103917.1"; transcript_id "ENSMUST00000192127.1"; gene_type "lincRNA"; gene_name "Gm38072"; transcript_type "lincRNA"; transcript_name "Gm38072-201"; exon_number 2; exon_id "ENSMUSE00001337011.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050391.1"; havana_transcript "OTTMUST00000127901.1";
mm10-chrY	HAVANA	gene	18208481	18209176	.	+	.	gene_id "ENSMUSG00000104439.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20851"; level 2; havana_gene "OTTMUSG00000050392.1";
mm10-chrY	HAVANA	transcript	18208481	18209176	.	+	.	gene_id "ENSMUSG00000104439.1"; transcript_id "ENSMUST00000193038.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20851"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20851-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050392.1"; havana_transcript "OTTMUST00000127902.1";
mm10-chrY	HAVANA	exon	18208481	18209176	.	+	.	gene_id "ENSMUSG00000104439.1"; transcript_id "ENSMUST00000193038.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20851"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20851-201"; exon_number 1; exon_id "ENSMUSE00001337362.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050392.1"; havana_transcript "OTTMUST00000127902.1";
mm10-chrY	HAVANA	gene	18245623	18246318	.	+	.	gene_id "ENSMUSG00000104446.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30312"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050393.1";
mm10-chrY	HAVANA	transcript	18245623	18246318	.	+	.	gene_id "ENSMUSG00000104446.1"; transcript_id "ENSMUST00000194516.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30312"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30312-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050393.1"; havana_transcript "OTTMUST00000127903.1";
mm10-chrY	HAVANA	exon	18245623	18246318	.	+	.	gene_id "ENSMUSG00000104446.1"; transcript_id "ENSMUST00000194516.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30312"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30312-201"; exon_number 1; exon_id "ENSMUSE00001343781.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050393.1"; havana_transcript "OTTMUST00000127903.1";
mm10-chrY	HAVANA	gene	18282548	18283225	.	+	.	gene_id "ENSMUSG00000103514.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37433"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050394.1";
mm10-chrY	HAVANA	transcript	18282548	18283225	.	+	.	gene_id "ENSMUSG00000103514.1"; transcript_id "ENSMUST00000192695.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37433"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37433-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050394.1"; havana_transcript "OTTMUST00000127904.1";
mm10-chrY	HAVANA	exon	18282548	18283225	.	+	.	gene_id "ENSMUSG00000103514.1"; transcript_id "ENSMUST00000192695.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37433"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37433-201"; exon_number 1; exon_id "ENSMUSE00001336608.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050394.1"; havana_transcript "OTTMUST00000127904.1";
mm10-chrY	HAVANA	gene	18283695	18284883	.	+	.	gene_id "ENSMUSG00000102150.1"; gene_type "lincRNA"; gene_name "Gm37473"; level 2; havana_gene "OTTMUSG00000050395.1";
mm10-chrY	HAVANA	transcript	18283695	18284883	.	+	.	gene_id "ENSMUSG00000102150.1"; transcript_id "ENSMUST00000195079.1"; gene_type "lincRNA"; gene_name "Gm37473"; transcript_type "lincRNA"; transcript_name "Gm37473-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050395.1"; havana_transcript "OTTMUST00000127905.1";
mm10-chrY	HAVANA	exon	18283695	18283878	.	+	.	gene_id "ENSMUSG00000102150.1"; transcript_id "ENSMUST00000195079.1"; gene_type "lincRNA"; gene_name "Gm37473"; transcript_type "lincRNA"; transcript_name "Gm37473-201"; exon_number 1; exon_id "ENSMUSE00001345624.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050395.1"; havana_transcript "OTTMUST00000127905.1";
mm10-chrY	HAVANA	exon	18284394	18284883	.	+	.	gene_id "ENSMUSG00000102150.1"; transcript_id "ENSMUST00000195079.1"; gene_type "lincRNA"; gene_name "Gm37473"; transcript_type "lincRNA"; transcript_name "Gm37473-201"; exon_number 2; exon_id "ENSMUSE00001339394.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050395.1"; havana_transcript "OTTMUST00000127905.1";
mm10-chrY	HAVANA	gene	18293525	18295111	.	-	.	gene_id "ENSMUSG00000103782.1"; gene_type "lincRNA"; gene_name "Gm37656"; level 2; havana_gene "OTTMUSG00000050396.1";
mm10-chrY	HAVANA	transcript	18293525	18295111	.	-	.	gene_id "ENSMUSG00000103782.1"; transcript_id "ENSMUST00000192673.1"; gene_type "lincRNA"; gene_name "Gm37656"; transcript_type "lincRNA"; transcript_name "Gm37656-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050396.1"; havana_transcript "OTTMUST00000127906.1";
mm10-chrY	HAVANA	exon	18294876	18295111	.	-	.	gene_id "ENSMUSG00000103782.1"; transcript_id "ENSMUST00000192673.1"; gene_type "lincRNA"; gene_name "Gm37656"; transcript_type "lincRNA"; transcript_name "Gm37656-201"; exon_number 1; exon_id "ENSMUSE00001336466.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050396.1"; havana_transcript "OTTMUST00000127906.1";
mm10-chrY	HAVANA	exon	18293525	18293685	.	-	.	gene_id "ENSMUSG00000103782.1"; transcript_id "ENSMUST00000192673.1"; gene_type "lincRNA"; gene_name "Gm37656"; transcript_type "lincRNA"; transcript_name "Gm37656-201"; exon_number 2; exon_id "ENSMUSE00001341153.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050396.1"; havana_transcript "OTTMUST00000127906.1";
mm10-chrY	HAVANA	gene	18321027	18322074	.	+	.	gene_id "ENSMUSG00000104050.1"; gene_type "lincRNA"; gene_name "Gm38127"; level 2; havana_gene "OTTMUSG00000050397.1";
mm10-chrY	HAVANA	transcript	18321027	18322074	.	+	.	gene_id "ENSMUSG00000104050.1"; transcript_id "ENSMUST00000191978.1"; gene_type "lincRNA"; gene_name "Gm38127"; transcript_type "lincRNA"; transcript_name "Gm38127-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050397.1"; havana_transcript "OTTMUST00000127907.1";
mm10-chrY	HAVANA	exon	18321027	18321307	.	+	.	gene_id "ENSMUSG00000104050.1"; transcript_id "ENSMUST00000191978.1"; gene_type "lincRNA"; gene_name "Gm38127"; transcript_type "lincRNA"; transcript_name "Gm38127-201"; exon_number 1; exon_id "ENSMUSE00001340957.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050397.1"; havana_transcript "OTTMUST00000127907.1";
mm10-chrY	HAVANA	exon	18321888	18322074	.	+	.	gene_id "ENSMUSG00000104050.1"; transcript_id "ENSMUST00000191978.1"; gene_type "lincRNA"; gene_name "Gm38127"; transcript_type "lincRNA"; transcript_name "Gm38127-201"; exon_number 2; exon_id "ENSMUSE00001336699.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050397.1"; havana_transcript "OTTMUST00000127907.1";
mm10-chrY	HAVANA	gene	18496225	18526495	.	+	.	gene_id "ENSMUSG00000102264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30638"; level 2; havana_gene "OTTMUSG00000050398.1";
mm10-chrY	HAVANA	transcript	18496225	18526495	.	+	.	gene_id "ENSMUSG00000102264.1"; transcript_id "ENSMUST00000195570.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30638-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050398.1"; havana_transcript "OTTMUST00000127908.1";
mm10-chrY	HAVANA	exon	18496225	18496333	.	+	.	gene_id "ENSMUSG00000102264.1"; transcript_id "ENSMUST00000195570.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30638-201"; exon_number 1; exon_id "ENSMUSE00001341645.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050398.1"; havana_transcript "OTTMUST00000127908.1";
mm10-chrY	HAVANA	exon	18507572	18507638	.	+	.	gene_id "ENSMUSG00000102264.1"; transcript_id "ENSMUST00000195570.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30638-201"; exon_number 2; exon_id "ENSMUSE00001336627.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050398.1"; havana_transcript "OTTMUST00000127908.1";
mm10-chrY	HAVANA	exon	18508194	18508228	.	+	.	gene_id "ENSMUSG00000102264.1"; transcript_id "ENSMUST00000195570.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30638-201"; exon_number 3; exon_id "ENSMUSE00001338355.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050398.1"; havana_transcript "OTTMUST00000127908.1";
mm10-chrY	HAVANA	exon	18515222	18515288	.	+	.	gene_id "ENSMUSG00000102264.1"; transcript_id "ENSMUST00000195570.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30638-201"; exon_number 4; exon_id "ENSMUSE00001341814.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050398.1"; havana_transcript "OTTMUST00000127908.1";
mm10-chrY	HAVANA	exon	18515857	18515891	.	+	.	gene_id "ENSMUSG00000102264.1"; transcript_id "ENSMUST00000195570.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30638-201"; exon_number 5; exon_id "ENSMUSE00001340970.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050398.1"; havana_transcript "OTTMUST00000127908.1";
mm10-chrY	HAVANA	exon	18523031	18523148	.	+	.	gene_id "ENSMUSG00000102264.1"; transcript_id "ENSMUST00000195570.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30638-201"; exon_number 6; exon_id "ENSMUSE00001338344.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050398.1"; havana_transcript "OTTMUST00000127908.1";
mm10-chrY	HAVANA	exon	18523885	18523983	.	+	.	gene_id "ENSMUSG00000102264.1"; transcript_id "ENSMUST00000195570.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30638-201"; exon_number 7; exon_id "ENSMUSE00001340263.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050398.1"; havana_transcript "OTTMUST00000127908.1";
mm10-chrY	HAVANA	exon	18526012	18526110	.	+	.	gene_id "ENSMUSG00000102264.1"; transcript_id "ENSMUST00000195570.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30638-201"; exon_number 8; exon_id "ENSMUSE00001342715.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050398.1"; havana_transcript "OTTMUST00000127908.1";
mm10-chrY	HAVANA	exon	18526469	18526495	.	+	.	gene_id "ENSMUSG00000102264.1"; transcript_id "ENSMUST00000195570.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30638-201"; exon_number 9; exon_id "ENSMUSE00001343360.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050398.1"; havana_transcript "OTTMUST00000127908.1";
mm10-chrY	HAVANA	gene	18557838	18558876	.	-	.	gene_id "ENSMUSG00000103871.1"; gene_type "lincRNA"; gene_name "Gm38361"; level 2; havana_gene "OTTMUSG00000050399.1";
mm10-chrY	HAVANA	transcript	18557838	18558876	.	-	.	gene_id "ENSMUSG00000103871.1"; transcript_id "ENSMUST00000193419.1"; gene_type "lincRNA"; gene_name "Gm38361"; transcript_type "lincRNA"; transcript_name "Gm38361-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050399.1"; havana_transcript "OTTMUST00000127909.1";
mm10-chrY	HAVANA	exon	18558606	18558876	.	-	.	gene_id "ENSMUSG00000103871.1"; transcript_id "ENSMUST00000193419.1"; gene_type "lincRNA"; gene_name "Gm38361"; transcript_type "lincRNA"; transcript_name "Gm38361-201"; exon_number 1; exon_id "ENSMUSE00001340218.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050399.1"; havana_transcript "OTTMUST00000127909.1";
mm10-chrY	HAVANA	exon	18557838	18558024	.	-	.	gene_id "ENSMUSG00000103871.1"; transcript_id "ENSMUST00000193419.1"; gene_type "lincRNA"; gene_name "Gm38361"; transcript_type "lincRNA"; transcript_name "Gm38361-201"; exon_number 2; exon_id "ENSMUSE00001336798.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050399.1"; havana_transcript "OTTMUST00000127909.1";
mm10-chrY	HAVANA	gene	18586095	18586790	.	-	.	gene_id "ENSMUSG00000104356.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31260"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050400.1";
mm10-chrY	HAVANA	transcript	18586095	18586790	.	-	.	gene_id "ENSMUSG00000104356.1"; transcript_id "ENSMUST00000193478.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31260"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31260-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050400.1"; havana_transcript "OTTMUST00000127910.1";
mm10-chrY	HAVANA	exon	18586095	18586790	.	-	.	gene_id "ENSMUSG00000104356.1"; transcript_id "ENSMUST00000193478.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31260"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31260-201"; exon_number 1; exon_id "ENSMUSE00001339489.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050400.1"; havana_transcript "OTTMUST00000127910.1";
mm10-chrY	HAVANA	gene	18623067	18623762	.	-	.	gene_id "ENSMUSG00000103802.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21660"; level 2; havana_gene "OTTMUSG00000050401.1";
mm10-chrY	HAVANA	transcript	18623067	18623762	.	-	.	gene_id "ENSMUSG00000103802.1"; transcript_id "ENSMUST00000195789.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21660"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21660-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050401.1"; havana_transcript "OTTMUST00000127911.1";
mm10-chrY	HAVANA	exon	18623067	18623762	.	-	.	gene_id "ENSMUSG00000103802.1"; transcript_id "ENSMUST00000195789.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21660"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21660-201"; exon_number 1; exon_id "ENSMUSE00001337625.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050401.1"; havana_transcript "OTTMUST00000127911.1";
mm10-chrY	HAVANA	gene	18629784	18633125	.	-	.	gene_id "ENSMUSG00000104472.1"; gene_type "lincRNA"; gene_name "Gm38209"; level 2; havana_gene "OTTMUSG00000050402.1";
mm10-chrY	HAVANA	transcript	18629784	18633125	.	-	.	gene_id "ENSMUSG00000104472.1"; transcript_id "ENSMUST00000192711.1"; gene_type "lincRNA"; gene_name "Gm38209"; transcript_type "lincRNA"; transcript_name "Gm38209-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050402.1"; havana_transcript "OTTMUST00000127912.1";
mm10-chrY	HAVANA	exon	18632903	18633125	.	-	.	gene_id "ENSMUSG00000104472.1"; transcript_id "ENSMUST00000192711.1"; gene_type "lincRNA"; gene_name "Gm38209"; transcript_type "lincRNA"; transcript_name "Gm38209-201"; exon_number 1; exon_id "ENSMUSE00001345384.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050402.1"; havana_transcript "OTTMUST00000127912.1";
mm10-chrY	HAVANA	exon	18629784	18631729	.	-	.	gene_id "ENSMUSG00000104472.1"; transcript_id "ENSMUST00000192711.1"; gene_type "lincRNA"; gene_name "Gm38209"; transcript_type "lincRNA"; transcript_name "Gm38209-201"; exon_number 2; exon_id "ENSMUSE00001336499.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050402.1"; havana_transcript "OTTMUST00000127912.1";
mm10-chrY	ENSEMBL	gene	18654482	18655024	.	+	.	gene_id "ENSMUSG00000095927.1"; gene_type "protein_coding"; gene_name "Gm21822"; level 3;
mm10-chrY	ENSEMBL	transcript	18654482	18655024	.	+	.	gene_id "ENSMUSG00000095927.1"; transcript_id "ENSMUST00000179302.1"; gene_type "protein_coding"; gene_name "Gm21822"; transcript_type "protein_coding"; transcript_name "Gm21822-201"; level 3; protein_id "ENSMUSP00000137501.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	18654482	18655024	.	+	.	gene_id "ENSMUSG00000095927.1"; transcript_id "ENSMUST00000179302.1"; gene_type "protein_coding"; gene_name "Gm21822"; transcript_type "protein_coding"; transcript_name "Gm21822-201"; exon_number 1; exon_id "ENSMUSE00000969879.1"; level 3; protein_id "ENSMUSP00000137501.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	18654482	18655021	.	+	0	gene_id "ENSMUSG00000095927.1"; transcript_id "ENSMUST00000179302.1"; gene_type "protein_coding"; gene_name "Gm21822"; transcript_type "protein_coding"; transcript_name "Gm21822-201"; exon_number 1; exon_id "ENSMUSE00000969879.1"; level 3; protein_id "ENSMUSP00000137501.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	18654482	18654484	.	+	0	gene_id "ENSMUSG00000095927.1"; transcript_id "ENSMUST00000179302.1"; gene_type "protein_coding"; gene_name "Gm21822"; transcript_type "protein_coding"; transcript_name "Gm21822-201"; exon_number 1; exon_id "ENSMUSE00000969879.1"; level 3; protein_id "ENSMUSP00000137501.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	18655022	18655024	.	+	0	gene_id "ENSMUSG00000095927.1"; transcript_id "ENSMUST00000179302.1"; gene_type "protein_coding"; gene_name "Gm21822"; transcript_type "protein_coding"; transcript_name "Gm21822-201"; exon_number 1; exon_id "ENSMUSE00000969879.1"; level 3; protein_id "ENSMUSP00000137501.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	18655022	18655024	.	+	.	gene_id "ENSMUSG00000095927.1"; transcript_id "ENSMUST00000179302.1"; gene_type "protein_coding"; gene_name "Gm21822"; transcript_type "protein_coding"; transcript_name "Gm21822-201"; exon_number 1; exon_id "ENSMUSE00000969879.1"; level 3; protein_id "ENSMUSP00000137501.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	18665417	18667781	.	+	.	gene_id "ENSMUSG00000103347.1"; gene_type "lincRNA"; gene_name "Gm37734"; level 2; havana_gene "OTTMUSG00000050403.1";
mm10-chrY	HAVANA	transcript	18665417	18667781	.	+	.	gene_id "ENSMUSG00000103347.1"; transcript_id "ENSMUST00000194294.1"; gene_type "lincRNA"; gene_name "Gm37734"; transcript_type "lincRNA"; transcript_name "Gm37734-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050403.1"; havana_transcript "OTTMUST00000127913.1";
mm10-chrY	HAVANA	exon	18665417	18665603	.	+	.	gene_id "ENSMUSG00000103347.1"; transcript_id "ENSMUST00000194294.1"; gene_type "lincRNA"; gene_name "Gm37734"; transcript_type "lincRNA"; transcript_name "Gm37734-201"; exon_number 1; exon_id "ENSMUSE00001339572.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050403.1"; havana_transcript "OTTMUST00000127913.1";
mm10-chrY	HAVANA	exon	18666093	18666274	.	+	.	gene_id "ENSMUSG00000103347.1"; transcript_id "ENSMUST00000194294.1"; gene_type "lincRNA"; gene_name "Gm37734"; transcript_type "lincRNA"; transcript_name "Gm37734-201"; exon_number 2; exon_id "ENSMUSE00001340649.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050403.1"; havana_transcript "OTTMUST00000127913.1";
mm10-chrY	HAVANA	exon	18667003	18667186	.	+	.	gene_id "ENSMUSG00000103347.1"; transcript_id "ENSMUST00000194294.1"; gene_type "lincRNA"; gene_name "Gm37734"; transcript_type "lincRNA"; transcript_name "Gm37734-201"; exon_number 3; exon_id "ENSMUSE00001341696.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050403.1"; havana_transcript "OTTMUST00000127913.1";
mm10-chrY	HAVANA	exon	18667714	18667781	.	+	.	gene_id "ENSMUSG00000103347.1"; transcript_id "ENSMUST00000194294.1"; gene_type "lincRNA"; gene_name "Gm37734"; transcript_type "lincRNA"; transcript_name "Gm37734-201"; exon_number 4; exon_id "ENSMUSE00001341898.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050403.1"; havana_transcript "OTTMUST00000127913.1";
mm10-chrY	HAVANA	gene	18693357	18696591	.	+	.	gene_id "ENSMUSG00000104407.5"; gene_type "lincRNA"; gene_name "Gm38013"; level 2; havana_gene "OTTMUSG00000050404.1";
mm10-chrY	HAVANA	transcript	18693357	18696591	.	+	.	gene_id "ENSMUSG00000104407.5"; transcript_id "ENSMUST00000195453.5"; gene_type "lincRNA"; gene_name "Gm38013"; transcript_type "lincRNA"; transcript_name "Gm38013-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050404.1"; havana_transcript "OTTMUST00000127914.1";
mm10-chrY	HAVANA	exon	18693357	18693995	.	+	.	gene_id "ENSMUSG00000104407.5"; transcript_id "ENSMUST00000195453.5"; gene_type "lincRNA"; gene_name "Gm38013"; transcript_type "lincRNA"; transcript_name "Gm38013-202"; exon_number 1; exon_id "ENSMUSE00001341140.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050404.1"; havana_transcript "OTTMUST00000127914.1";
mm10-chrY	HAVANA	exon	18694479	18694664	.	+	.	gene_id "ENSMUSG00000104407.5"; transcript_id "ENSMUST00000195453.5"; gene_type "lincRNA"; gene_name "Gm38013"; transcript_type "lincRNA"; transcript_name "Gm38013-202"; exon_number 2; exon_id "ENSMUSE00001336840.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050404.1"; havana_transcript "OTTMUST00000127914.1";
mm10-chrY	HAVANA	exon	18695392	18695575	.	+	.	gene_id "ENSMUSG00000104407.5"; transcript_id "ENSMUST00000195453.5"; gene_type "lincRNA"; gene_name "Gm38013"; transcript_type "lincRNA"; transcript_name "Gm38013-202"; exon_number 3; exon_id "ENSMUSE00001338272.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050404.1"; havana_transcript "OTTMUST00000127914.1";
mm10-chrY	HAVANA	exon	18696102	18696591	.	+	.	gene_id "ENSMUSG00000104407.5"; transcript_id "ENSMUST00000195453.5"; gene_type "lincRNA"; gene_name "Gm38013"; transcript_type "lincRNA"; transcript_name "Gm38013-202"; exon_number 4; exon_id "ENSMUSE00001346081.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050404.1"; havana_transcript "OTTMUST00000127914.1";
mm10-chrY	HAVANA	transcript	18693810	18696170	.	+	.	gene_id "ENSMUSG00000104407.5"; transcript_id "ENSMUST00000195214.1"; gene_type "lincRNA"; gene_name "Gm38013"; transcript_type "lincRNA"; transcript_name "Gm38013-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050404.1"; havana_transcript "OTTMUST00000127915.1";
mm10-chrY	HAVANA	exon	18693810	18693995	.	+	.	gene_id "ENSMUSG00000104407.5"; transcript_id "ENSMUST00000195214.1"; gene_type "lincRNA"; gene_name "Gm38013"; transcript_type "lincRNA"; transcript_name "Gm38013-201"; exon_number 1; exon_id "ENSMUSE00001342003.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050404.1"; havana_transcript "OTTMUST00000127915.1";
mm10-chrY	HAVANA	exon	18694483	18694664	.	+	.	gene_id "ENSMUSG00000104407.5"; transcript_id "ENSMUST00000195214.1"; gene_type "lincRNA"; gene_name "Gm38013"; transcript_type "lincRNA"; transcript_name "Gm38013-201"; exon_number 2; exon_id "ENSMUSE00001343259.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050404.1"; havana_transcript "OTTMUST00000127915.1";
mm10-chrY	HAVANA	exon	18695392	18695575	.	+	.	gene_id "ENSMUSG00000104407.5"; transcript_id "ENSMUST00000195214.1"; gene_type "lincRNA"; gene_name "Gm38013"; transcript_type "lincRNA"; transcript_name "Gm38013-201"; exon_number 3; exon_id "ENSMUSE00001338272.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050404.1"; havana_transcript "OTTMUST00000127915.1";
mm10-chrY	HAVANA	exon	18696102	18696170	.	+	.	gene_id "ENSMUSG00000104407.5"; transcript_id "ENSMUST00000195214.1"; gene_type "lincRNA"; gene_name "Gm38013"; transcript_type "lincRNA"; transcript_name "Gm38013-201"; exon_number 4; exon_id "ENSMUSE00001341116.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050404.1"; havana_transcript "OTTMUST00000127915.1";
mm10-chrY	HAVANA	gene	18742471	18743166	.	-	.	gene_id "ENSMUSG00000102290.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21678"; level 2; havana_gene "OTTMUSG00000050405.1";
mm10-chrY	HAVANA	transcript	18742471	18743166	.	-	.	gene_id "ENSMUSG00000102290.1"; transcript_id "ENSMUST00000193567.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21678"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21678-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050405.1"; havana_transcript "OTTMUST00000127916.1";
mm10-chrY	HAVANA	exon	18742471	18743166	.	-	.	gene_id "ENSMUSG00000102290.1"; transcript_id "ENSMUST00000193567.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21678"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21678-201"; exon_number 1; exon_id "ENSMUSE00001341303.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050405.1"; havana_transcript "OTTMUST00000127916.1";
mm10-chrY	HAVANA	gene	18749156	18752497	.	-	.	gene_id "ENSMUSG00000103612.1"; gene_type "lincRNA"; gene_name "Gm37948"; level 2; havana_gene "OTTMUSG00000050406.1";
mm10-chrY	HAVANA	transcript	18749156	18752497	.	-	.	gene_id "ENSMUSG00000103612.1"; transcript_id "ENSMUST00000192846.1"; gene_type "lincRNA"; gene_name "Gm37948"; transcript_type "lincRNA"; transcript_name "Gm37948-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050406.1"; havana_transcript "OTTMUST00000127917.1";
mm10-chrY	HAVANA	exon	18752275	18752497	.	-	.	gene_id "ENSMUSG00000103612.1"; transcript_id "ENSMUST00000192846.1"; gene_type "lincRNA"; gene_name "Gm37948"; transcript_type "lincRNA"; transcript_name "Gm37948-201"; exon_number 1; exon_id "ENSMUSE00001341058.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050406.1"; havana_transcript "OTTMUST00000127917.1";
mm10-chrY	HAVANA	exon	18749156	18751101	.	-	.	gene_id "ENSMUSG00000103612.1"; transcript_id "ENSMUST00000192846.1"; gene_type "lincRNA"; gene_name "Gm37948"; transcript_type "lincRNA"; transcript_name "Gm37948-201"; exon_number 2; exon_id "ENSMUSE00001339493.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050406.1"; havana_transcript "OTTMUST00000127917.1";
mm10-chrY	HAVANA	gene	18863519	18864085	.	-	.	gene_id "ENSMUSG00000102580.1"; gene_type "processed_pseudogene"; gene_name "Gm37442"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050360.1";
mm10-chrY	HAVANA	transcript	18863519	18864085	.	-	.	gene_id "ENSMUSG00000102580.1"; transcript_id "ENSMUST00000191915.1"; gene_type "processed_pseudogene"; gene_name "Gm37442"; transcript_type "processed_pseudogene"; transcript_name "Gm37442-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050360.1"; havana_transcript "OTTMUST00000127834.1";
mm10-chrY	HAVANA	exon	18863519	18864085	.	-	.	gene_id "ENSMUSG00000102580.1"; transcript_id "ENSMUST00000191915.1"; gene_type "processed_pseudogene"; gene_name "Gm37442"; transcript_type "processed_pseudogene"; transcript_name "Gm37442-201"; exon_number 1; exon_id "ENSMUSE00001346382.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050360.1"; havana_transcript "OTTMUST00000127834.1";
mm10-chrY	HAVANA	gene	18933163	18935442	.	+	.	gene_id "ENSMUSG00000102273.5"; gene_type "lincRNA"; gene_name "Gm34550"; level 2; havana_gene "OTTMUSG00000050361.1";
mm10-chrY	HAVANA	transcript	18933163	18935442	.	+	.	gene_id "ENSMUSG00000102273.5"; transcript_id "ENSMUST00000191625.5"; gene_type "lincRNA"; gene_name "Gm34550"; transcript_type "lincRNA"; transcript_name "Gm34550-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050361.1"; havana_transcript "OTTMUST00000127835.1";
mm10-chrY	HAVANA	exon	18933163	18933263	.	+	.	gene_id "ENSMUSG00000102273.5"; transcript_id "ENSMUST00000191625.5"; gene_type "lincRNA"; gene_name "Gm34550"; transcript_type "lincRNA"; transcript_name "Gm34550-201"; exon_number 1; exon_id "ENSMUSE00001340250.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050361.1"; havana_transcript "OTTMUST00000127835.1";
mm10-chrY	HAVANA	exon	18933751	18933932	.	+	.	gene_id "ENSMUSG00000102273.5"; transcript_id "ENSMUST00000191625.5"; gene_type "lincRNA"; gene_name "Gm34550"; transcript_type "lincRNA"; transcript_name "Gm34550-201"; exon_number 2; exon_id "ENSMUSE00001339086.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050361.1"; havana_transcript "OTTMUST00000127835.1";
mm10-chrY	HAVANA	exon	18935374	18935442	.	+	.	gene_id "ENSMUSG00000102273.5"; transcript_id "ENSMUST00000191625.5"; gene_type "lincRNA"; gene_name "Gm34550"; transcript_type "lincRNA"; transcript_name "Gm34550-201"; exon_number 3; exon_id "ENSMUSE00001339031.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050361.1"; havana_transcript "OTTMUST00000127835.1";
mm10-chrY	HAVANA	transcript	18933163	18935442	.	+	.	gene_id "ENSMUSG00000102273.5"; transcript_id "ENSMUST00000195186.1"; gene_type "lincRNA"; gene_name "Gm34550"; transcript_type "lincRNA"; transcript_name "Gm34550-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050361.1"; havana_transcript "OTTMUST00000127836.1";
mm10-chrY	HAVANA	exon	18933163	18933263	.	+	.	gene_id "ENSMUSG00000102273.5"; transcript_id "ENSMUST00000195186.1"; gene_type "lincRNA"; gene_name "Gm34550"; transcript_type "lincRNA"; transcript_name "Gm34550-202"; exon_number 1; exon_id "ENSMUSE00001340250.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050361.1"; havana_transcript "OTTMUST00000127836.1";
mm10-chrY	HAVANA	exon	18933751	18933932	.	+	.	gene_id "ENSMUSG00000102273.5"; transcript_id "ENSMUST00000195186.1"; gene_type "lincRNA"; gene_name "Gm34550"; transcript_type "lincRNA"; transcript_name "Gm34550-202"; exon_number 2; exon_id "ENSMUSE00001339086.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050361.1"; havana_transcript "OTTMUST00000127836.1";
mm10-chrY	HAVANA	exon	18934660	18934844	.	+	.	gene_id "ENSMUSG00000102273.5"; transcript_id "ENSMUST00000195186.1"; gene_type "lincRNA"; gene_name "Gm34550"; transcript_type "lincRNA"; transcript_name "Gm34550-202"; exon_number 3; exon_id "ENSMUSE00001345547.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050361.1"; havana_transcript "OTTMUST00000127836.1";
mm10-chrY	HAVANA	exon	18935374	18935442	.	+	.	gene_id "ENSMUSG00000102273.5"; transcript_id "ENSMUST00000195186.1"; gene_type "lincRNA"; gene_name "Gm34550"; transcript_type "lincRNA"; transcript_name "Gm34550-202"; exon_number 4; exon_id "ENSMUSE00001339031.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050361.1"; havana_transcript "OTTMUST00000127836.1";
mm10-chrY	HAVANA	gene	18972545	18973072	.	+	.	gene_id "ENSMUSG00000102294.1"; gene_type "lincRNA"; gene_name "Gm37544"; level 2; havana_gene "OTTMUSG00000050362.1";
mm10-chrY	HAVANA	transcript	18972545	18973072	.	+	.	gene_id "ENSMUSG00000102294.1"; transcript_id "ENSMUST00000192803.1"; gene_type "lincRNA"; gene_name "Gm37544"; transcript_type "lincRNA"; transcript_name "Gm37544-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000050362.1"; havana_transcript "OTTMUST00000127837.1";
mm10-chrY	HAVANA	exon	18972545	18972649	.	+	.	gene_id "ENSMUSG00000102294.1"; transcript_id "ENSMUST00000192803.1"; gene_type "lincRNA"; gene_name "Gm37544"; transcript_type "lincRNA"; transcript_name "Gm37544-201"; exon_number 1; exon_id "ENSMUSE00001341002.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000050362.1"; havana_transcript "OTTMUST00000127837.1";
mm10-chrY	HAVANA	exon	18973004	18973072	.	+	.	gene_id "ENSMUSG00000102294.1"; transcript_id "ENSMUST00000192803.1"; gene_type "lincRNA"; gene_name "Gm37544"; transcript_type "lincRNA"; transcript_name "Gm37544-201"; exon_number 2; exon_id "ENSMUSE00001346295.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000050362.1"; havana_transcript "OTTMUST00000127837.1";
mm10-chrY	HAVANA	gene	18994762	18997125	.	+	.	gene_id "ENSMUSG00000103190.5"; gene_type "lincRNA"; gene_name "Gm34716"; level 2; havana_gene "OTTMUSG00000050363.1";
mm10-chrY	HAVANA	transcript	18994762	18997125	.	+	.	gene_id "ENSMUSG00000103190.5"; transcript_id "ENSMUST00000194060.5"; gene_type "lincRNA"; gene_name "Gm34716"; transcript_type "lincRNA"; transcript_name "Gm34716-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050363.1"; havana_transcript "OTTMUST00000127838.1";
mm10-chrY	HAVANA	exon	18994762	18994947	.	+	.	gene_id "ENSMUSG00000103190.5"; transcript_id "ENSMUST00000194060.5"; gene_type "lincRNA"; gene_name "Gm34716"; transcript_type "lincRNA"; transcript_name "Gm34716-201"; exon_number 1; exon_id "ENSMUSE00001337497.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050363.1"; havana_transcript "OTTMUST00000127838.1";
mm10-chrY	HAVANA	exon	18995435	18995616	.	+	.	gene_id "ENSMUSG00000103190.5"; transcript_id "ENSMUST00000194060.5"; gene_type "lincRNA"; gene_name "Gm34716"; transcript_type "lincRNA"; transcript_name "Gm34716-201"; exon_number 2; exon_id "ENSMUSE00001336398.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050363.1"; havana_transcript "OTTMUST00000127838.1";
mm10-chrY	HAVANA	exon	18996345	18996529	.	+	.	gene_id "ENSMUSG00000103190.5"; transcript_id "ENSMUST00000194060.5"; gene_type "lincRNA"; gene_name "Gm34716"; transcript_type "lincRNA"; transcript_name "Gm34716-201"; exon_number 3; exon_id "ENSMUSE00001340900.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050363.1"; havana_transcript "OTTMUST00000127838.1";
mm10-chrY	HAVANA	exon	18997058	18997125	.	+	.	gene_id "ENSMUSG00000103190.5"; transcript_id "ENSMUST00000194060.5"; gene_type "lincRNA"; gene_name "Gm34716"; transcript_type "lincRNA"; transcript_name "Gm34716-201"; exon_number 4; exon_id "ENSMUSE00001337632.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050363.1"; havana_transcript "OTTMUST00000127838.1";
mm10-chrY	HAVANA	transcript	18994762	18997125	.	+	.	gene_id "ENSMUSG00000103190.5"; transcript_id "ENSMUST00000195018.1"; gene_type "lincRNA"; gene_name "Gm34716"; transcript_type "lincRNA"; transcript_name "Gm34716-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050363.1"; havana_transcript "OTTMUST00000127839.1";
mm10-chrY	HAVANA	exon	18994762	18994947	.	+	.	gene_id "ENSMUSG00000103190.5"; transcript_id "ENSMUST00000195018.1"; gene_type "lincRNA"; gene_name "Gm34716"; transcript_type "lincRNA"; transcript_name "Gm34716-202"; exon_number 1; exon_id "ENSMUSE00001337497.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050363.1"; havana_transcript "OTTMUST00000127839.1";
mm10-chrY	HAVANA	exon	18995435	18995616	.	+	.	gene_id "ENSMUSG00000103190.5"; transcript_id "ENSMUST00000195018.1"; gene_type "lincRNA"; gene_name "Gm34716"; transcript_type "lincRNA"; transcript_name "Gm34716-202"; exon_number 2; exon_id "ENSMUSE00001336398.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050363.1"; havana_transcript "OTTMUST00000127839.1";
mm10-chrY	HAVANA	exon	18997058	18997125	.	+	.	gene_id "ENSMUSG00000103190.5"; transcript_id "ENSMUST00000195018.1"; gene_type "lincRNA"; gene_name "Gm34716"; transcript_type "lincRNA"; transcript_name "Gm34716-202"; exon_number 3; exon_id "ENSMUSE00001337632.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050363.1"; havana_transcript "OTTMUST00000127839.1";
mm10-chrY	HAVANA	gene	19038589	19039116	.	+	.	gene_id "ENSMUSG00000102867.1"; gene_type "lincRNA"; gene_name "Gm37635"; level 2; havana_gene "OTTMUSG00000050365.1";
mm10-chrY	HAVANA	transcript	19038589	19039116	.	+	.	gene_id "ENSMUSG00000102867.1"; transcript_id "ENSMUST00000193129.1"; gene_type "lincRNA"; gene_name "Gm37635"; transcript_type "lincRNA"; transcript_name "Gm37635-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050365.1"; havana_transcript "OTTMUST00000127840.1";
mm10-chrY	HAVANA	exon	19038589	19038693	.	+	.	gene_id "ENSMUSG00000102867.1"; transcript_id "ENSMUST00000193129.1"; gene_type "lincRNA"; gene_name "Gm37635"; transcript_type "lincRNA"; transcript_name "Gm37635-201"; exon_number 1; exon_id "ENSMUSE00001345405.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050365.1"; havana_transcript "OTTMUST00000127840.1";
mm10-chrY	HAVANA	exon	19039048	19039116	.	+	.	gene_id "ENSMUSG00000102867.1"; transcript_id "ENSMUST00000193129.1"; gene_type "lincRNA"; gene_name "Gm37635"; transcript_type "lincRNA"; transcript_name "Gm37635-201"; exon_number 2; exon_id "ENSMUSE00001342649.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050365.1"; havana_transcript "OTTMUST00000127840.1";
mm10-chrY	HAVANA	gene	19059861	19062218	.	+	.	gene_id "ENSMUSG00000102968.5"; gene_type "lincRNA"; gene_name "Gm35070"; level 2; havana_gene "OTTMUSG00000050366.1";
mm10-chrY	HAVANA	transcript	19059861	19062218	.	+	.	gene_id "ENSMUSG00000102968.5"; transcript_id "ENSMUST00000195750.5"; gene_type "lincRNA"; gene_name "Gm35070"; transcript_type "lincRNA"; transcript_name "Gm35070-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050366.1"; havana_transcript "OTTMUST00000127841.1";
mm10-chrY	HAVANA	exon	19059861	19060045	.	+	.	gene_id "ENSMUSG00000102968.5"; transcript_id "ENSMUST00000195750.5"; gene_type "lincRNA"; gene_name "Gm35070"; transcript_type "lincRNA"; transcript_name "Gm35070-202"; exon_number 1; exon_id "ENSMUSE00001340137.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050366.1"; havana_transcript "OTTMUST00000127841.1";
mm10-chrY	HAVANA	exon	19060527	19060708	.	+	.	gene_id "ENSMUSG00000102968.5"; transcript_id "ENSMUST00000195750.5"; gene_type "lincRNA"; gene_name "Gm35070"; transcript_type "lincRNA"; transcript_name "Gm35070-202"; exon_number 2; exon_id "ENSMUSE00001345583.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050366.1"; havana_transcript "OTTMUST00000127841.1";
mm10-chrY	HAVANA	exon	19062150	19062218	.	+	.	gene_id "ENSMUSG00000102968.5"; transcript_id "ENSMUST00000195750.5"; gene_type "lincRNA"; gene_name "Gm35070"; transcript_type "lincRNA"; transcript_name "Gm35070-202"; exon_number 3; exon_id "ENSMUSE00001345766.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050366.1"; havana_transcript "OTTMUST00000127841.1";
mm10-chrY	HAVANA	transcript	19059861	19062218	.	+	.	gene_id "ENSMUSG00000102968.5"; transcript_id "ENSMUST00000192589.1"; gene_type "lincRNA"; gene_name "Gm35070"; transcript_type "lincRNA"; transcript_name "Gm35070-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050366.1"; havana_transcript "OTTMUST00000127842.1";
mm10-chrY	HAVANA	exon	19059861	19060045	.	+	.	gene_id "ENSMUSG00000102968.5"; transcript_id "ENSMUST00000192589.1"; gene_type "lincRNA"; gene_name "Gm35070"; transcript_type "lincRNA"; transcript_name "Gm35070-201"; exon_number 1; exon_id "ENSMUSE00001340137.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050366.1"; havana_transcript "OTTMUST00000127842.1";
mm10-chrY	HAVANA	exon	19060527	19060708	.	+	.	gene_id "ENSMUSG00000102968.5"; transcript_id "ENSMUST00000192589.1"; gene_type "lincRNA"; gene_name "Gm35070"; transcript_type "lincRNA"; transcript_name "Gm35070-201"; exon_number 2; exon_id "ENSMUSE00001345583.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050366.1"; havana_transcript "OTTMUST00000127842.1";
mm10-chrY	HAVANA	exon	19061437	19061621	.	+	.	gene_id "ENSMUSG00000102968.5"; transcript_id "ENSMUST00000192589.1"; gene_type "lincRNA"; gene_name "Gm35070"; transcript_type "lincRNA"; transcript_name "Gm35070-201"; exon_number 3; exon_id "ENSMUSE00001341209.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050366.1"; havana_transcript "OTTMUST00000127842.1";
mm10-chrY	HAVANA	exon	19062150	19062218	.	+	.	gene_id "ENSMUSG00000102968.5"; transcript_id "ENSMUST00000192589.1"; gene_type "lincRNA"; gene_name "Gm35070"; transcript_type "lincRNA"; transcript_name "Gm35070-201"; exon_number 4; exon_id "ENSMUSE00001345766.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050366.1"; havana_transcript "OTTMUST00000127842.1";
mm10-chrY	HAVANA	gene	19113007	19139093	.	+	.	gene_id "ENSMUSG00000103371.1"; gene_type "protein_coding"; gene_name "Gm35134"; level 2; havana_gene "OTTMUSG00000050367.1";
mm10-chrY	HAVANA	transcript	19113007	19139093	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	exon	19113007	19113050	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 1; exon_id "ENSMUSE00001337600.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	exon	19114427	19114558	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 2; exon_id "ENSMUSE00001346260.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	CDS	19114441	19114558	.	+	0	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 2; exon_id "ENSMUSE00001346260.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	start_codon	19114441	19114443	.	+	0	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 2; exon_id "ENSMUSE00001346260.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	exon	19119877	19119943	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 3; exon_id "ENSMUSE00001339454.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	CDS	19119877	19119943	.	+	2	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 3; exon_id "ENSMUSE00001339454.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	exon	19120504	19120538	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 4; exon_id "ENSMUSE00001339766.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	CDS	19120504	19120538	.	+	1	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 4; exon_id "ENSMUSE00001339766.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	exon	19127567	19127633	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 5; exon_id "ENSMUSE00001336975.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	CDS	19127567	19127633	.	+	2	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 5; exon_id "ENSMUSE00001336975.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	exon	19128195	19128229	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 6; exon_id "ENSMUSE00001341571.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	CDS	19128195	19128229	.	+	1	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 6; exon_id "ENSMUSE00001341571.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	exon	19135395	19135512	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 7; exon_id "ENSMUSE00001342959.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	CDS	19135395	19135512	.	+	2	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 7; exon_id "ENSMUSE00001342959.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	exon	19136275	19136374	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 8; exon_id "ENSMUSE00001343389.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	CDS	19136275	19136374	.	+	1	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 8; exon_id "ENSMUSE00001343389.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	exon	19138410	19138508	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 9; exon_id "ENSMUSE00001339248.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	CDS	19138410	19138508	.	+	0	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 9; exon_id "ENSMUSE00001339248.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	exon	19138868	19139093	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 10; exon_id "ENSMUSE00001337508.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	CDS	19138868	19138894	.	+	0	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 10; exon_id "ENSMUSE00001337508.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	stop_codon	19138895	19138897	.	+	0	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 10; exon_id "ENSMUSE00001337508.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	UTR	19113007	19113050	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 1; exon_id "ENSMUSE00001337600.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	UTR	19114427	19114440	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 2; exon_id "ENSMUSE00001346260.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	UTR	19138895	19139093	.	+	.	gene_id "ENSMUSG00000103371.1"; transcript_id "ENSMUST00000194086.1"; gene_type "protein_coding"; gene_name "Gm35134"; transcript_type "protein_coding"; transcript_name "Gm35134-201"; exon_number 10; exon_id "ENSMUSE00001337508.1"; level 2; protein_id "ENSMUSP00000141239.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050367.1"; havana_transcript "OTTMUST00000127843.1";
mm10-chrY	HAVANA	gene	19157403	19157855	.	+	.	gene_id "ENSMUSG00000103489.1"; gene_type "lincRNA"; gene_name "Gm37998"; level 2; havana_gene "OTTMUSG00000050368.1";
mm10-chrY	HAVANA	transcript	19157403	19157855	.	+	.	gene_id "ENSMUSG00000103489.1"; transcript_id "ENSMUST00000195699.1"; gene_type "lincRNA"; gene_name "Gm37998"; transcript_type "lincRNA"; transcript_name "Gm37998-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050368.1"; havana_transcript "OTTMUST00000127844.1";
mm10-chrY	HAVANA	exon	19157403	19157507	.	+	.	gene_id "ENSMUSG00000103489.1"; transcript_id "ENSMUST00000195699.1"; gene_type "lincRNA"; gene_name "Gm37998"; transcript_type "lincRNA"; transcript_name "Gm37998-201"; exon_number 1; exon_id "ENSMUSE00001338210.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050368.1"; havana_transcript "OTTMUST00000127844.1";
mm10-chrY	HAVANA	exon	19157795	19157855	.	+	.	gene_id "ENSMUSG00000103489.1"; transcript_id "ENSMUST00000195699.1"; gene_type "lincRNA"; gene_name "Gm37998"; transcript_type "lincRNA"; transcript_name "Gm37998-201"; exon_number 2; exon_id "ENSMUSE00001345804.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050368.1"; havana_transcript "OTTMUST00000127844.1";
mm10-chrY	HAVANA	gene	19237403	19240380	.	-	.	gene_id "ENSMUSG00000103796.1"; gene_type "TEC"; gene_name "Gm38094"; level 2; havana_gene "OTTMUSG00000046799.1";
mm10-chrY	HAVANA	transcript	19237403	19240380	.	-	.	gene_id "ENSMUSG00000103796.1"; transcript_id "ENSMUST00000195864.1"; gene_type "TEC"; gene_name "Gm38094"; transcript_type "TEC"; transcript_name "Gm38094-201"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000046799.1"; havana_transcript "OTTMUST00000121432.1";
mm10-chrY	HAVANA	exon	19237403	19240380	.	-	.	gene_id "ENSMUSG00000103796.1"; transcript_id "ENSMUST00000195864.1"; gene_type "TEC"; gene_name "Gm38094"; transcript_type "TEC"; transcript_name "Gm38094-201"; exon_number 1; exon_id "ENSMUSE00001341664.1"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000046799.1"; havana_transcript "OTTMUST00000121432.1";
mm10-chrY	HAVANA	gene	19514319	19515014	.	-	.	gene_id "ENSMUSG00000102552.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21763"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050369.1";
mm10-chrY	HAVANA	transcript	19514319	19515014	.	-	.	gene_id "ENSMUSG00000102552.1"; transcript_id "ENSMUST00000195140.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21763"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21763-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050369.1"; havana_transcript "OTTMUST00000127845.1";
mm10-chrY	HAVANA	exon	19514319	19515014	.	-	.	gene_id "ENSMUSG00000102552.1"; transcript_id "ENSMUST00000195140.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21763"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21763-201"; exon_number 1; exon_id "ENSMUSE00001337063.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050369.1"; havana_transcript "OTTMUST00000127845.1";
mm10-chrY	HAVANA	gene	19671505	19672197	.	-	.	gene_id "ENSMUSG00000104426.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38369"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050346.1";
mm10-chrY	HAVANA	transcript	19671505	19672197	.	-	.	gene_id "ENSMUSG00000104426.1"; transcript_id "ENSMUST00000195101.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38369"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38369-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050346.1"; havana_transcript "OTTMUST00000127806.1";
mm10-chrY	HAVANA	exon	19671505	19672197	.	-	.	gene_id "ENSMUSG00000104426.1"; transcript_id "ENSMUST00000195101.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38369"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38369-201"; exon_number 1; exon_id "ENSMUSE00001337130.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050346.1"; havana_transcript "OTTMUST00000127806.1";
mm10-chrY	HAVANA	gene	19869287	19899927	.	+	.	gene_id "ENSMUSG00000102304.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35843"; level 2; havana_gene "OTTMUSG00000050347.1";
mm10-chrY	HAVANA	transcript	19869287	19899927	.	+	.	gene_id "ENSMUSG00000102304.1"; transcript_id "ENSMUST00000193716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35843-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050347.1"; havana_transcript "OTTMUST00000127807.1";
mm10-chrY	HAVANA	exon	19869287	19869404	.	+	.	gene_id "ENSMUSG00000102304.1"; transcript_id "ENSMUST00000193716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35843-201"; exon_number 1; exon_id "ENSMUSE00001343046.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050347.1"; havana_transcript "OTTMUST00000127807.1";
mm10-chrY	HAVANA	exon	19880913	19880979	.	+	.	gene_id "ENSMUSG00000102304.1"; transcript_id "ENSMUST00000193716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35843-201"; exon_number 2; exon_id "ENSMUSE00001339399.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050347.1"; havana_transcript "OTTMUST00000127807.1";
mm10-chrY	HAVANA	exon	19881584	19881618	.	+	.	gene_id "ENSMUSG00000102304.1"; transcript_id "ENSMUST00000193716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35843-201"; exon_number 3; exon_id "ENSMUSE00001344050.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050347.1"; havana_transcript "OTTMUST00000127807.1";
mm10-chrY	HAVANA	exon	19888653	19888719	.	+	.	gene_id "ENSMUSG00000102304.1"; transcript_id "ENSMUST00000193716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35843-201"; exon_number 4; exon_id "ENSMUSE00001340510.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050347.1"; havana_transcript "OTTMUST00000127807.1";
mm10-chrY	HAVANA	exon	19889288	19889322	.	+	.	gene_id "ENSMUSG00000102304.1"; transcript_id "ENSMUST00000193716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35843-201"; exon_number 5; exon_id "ENSMUSE00001338691.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050347.1"; havana_transcript "OTTMUST00000127807.1";
mm10-chrY	HAVANA	exon	19896454	19896571	.	+	.	gene_id "ENSMUSG00000102304.1"; transcript_id "ENSMUST00000193716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35843-201"; exon_number 6; exon_id "ENSMUSE00001345869.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050347.1"; havana_transcript "OTTMUST00000127807.1";
mm10-chrY	HAVANA	exon	19897328	19897427	.	+	.	gene_id "ENSMUSG00000102304.1"; transcript_id "ENSMUST00000193716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35843-201"; exon_number 7; exon_id "ENSMUSE00001345175.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050347.1"; havana_transcript "OTTMUST00000127807.1";
mm10-chrY	HAVANA	exon	19899444	19899542	.	+	.	gene_id "ENSMUSG00000102304.1"; transcript_id "ENSMUST00000193716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35843-201"; exon_number 8; exon_id "ENSMUSE00001339726.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050347.1"; havana_transcript "OTTMUST00000127807.1";
mm10-chrY	HAVANA	exon	19899901	19899927	.	+	.	gene_id "ENSMUSG00000102304.1"; transcript_id "ENSMUST00000193716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35843-201"; exon_number 9; exon_id "ENSMUSE00001340906.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050347.1"; havana_transcript "OTTMUST00000127807.1";
mm10-chrY	HAVANA	gene	19954018	19957248	.	+	.	gene_id "ENSMUSG00000102195.5"; gene_type "lincRNA"; gene_name "Gm38168"; level 2; havana_gene "OTTMUSG00000050337.1";
mm10-chrY	HAVANA	transcript	19954018	19957248	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000191717.5"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127790.1";
mm10-chrY	HAVANA	exon	19954018	19954657	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000191717.5"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-201"; exon_number 1; exon_id "ENSMUSE00001344520.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127790.1";
mm10-chrY	HAVANA	exon	19955141	19955323	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000191717.5"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-201"; exon_number 2; exon_id "ENSMUSE00001338471.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127790.1";
mm10-chrY	HAVANA	exon	19956053	19956233	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000191717.5"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-201"; exon_number 3; exon_id "ENSMUSE00001337390.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127790.1";
mm10-chrY	HAVANA	exon	19956760	19957248	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000191717.5"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-201"; exon_number 4; exon_id "ENSMUSE00001345872.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127790.1";
mm10-chrY	HAVANA	transcript	19954472	19956825	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000194577.5"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127791.1";
mm10-chrY	HAVANA	exon	19954472	19954657	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000194577.5"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-203"; exon_number 1; exon_id "ENSMUSE00001337734.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127791.1";
mm10-chrY	HAVANA	exon	19955145	19955323	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000194577.5"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-203"; exon_number 2; exon_id "ENSMUSE00001339790.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127791.1";
mm10-chrY	HAVANA	exon	19956053	19956233	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000194577.5"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-203"; exon_number 3; exon_id "ENSMUSE00001337390.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127791.1";
mm10-chrY	HAVANA	exon	19956760	19956825	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000194577.5"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-203"; exon_number 4; exon_id "ENSMUSE00001340607.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127791.1";
mm10-chrY	HAVANA	transcript	19954472	19956825	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000191798.1"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127792.1";
mm10-chrY	HAVANA	exon	19954472	19954657	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000191798.1"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-202"; exon_number 1; exon_id "ENSMUSE00001337734.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127792.1";
mm10-chrY	HAVANA	exon	19955145	19955323	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000191798.1"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-202"; exon_number 2; exon_id "ENSMUSE00001339790.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127792.1";
mm10-chrY	HAVANA	exon	19956760	19956825	.	+	.	gene_id "ENSMUSG00000102195.5"; transcript_id "ENSMUST00000191798.1"; gene_type "lincRNA"; gene_name "Gm38168"; transcript_type "lincRNA"; transcript_name "Gm38168-202"; exon_number 3; exon_id "ENSMUSE00001340607.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050337.1"; havana_transcript "OTTMUST00000127792.1";
mm10-chrY	HAVANA	gene	19983060	19985421	.	+	.	gene_id "ENSMUSG00000104506.5"; gene_type "lincRNA"; gene_name "Gm37740"; level 2; havana_gene "OTTMUSG00000050338.1";
mm10-chrY	HAVANA	transcript	19983060	19985421	.	+	.	gene_id "ENSMUSG00000104506.5"; transcript_id "ENSMUST00000193523.5"; gene_type "lincRNA"; gene_name "Gm37740"; transcript_type "lincRNA"; transcript_name "Gm37740-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050338.1"; havana_transcript "OTTMUST00000127793.1";
mm10-chrY	HAVANA	exon	19983060	19983245	.	+	.	gene_id "ENSMUSG00000104506.5"; transcript_id "ENSMUST00000193523.5"; gene_type "lincRNA"; gene_name "Gm37740"; transcript_type "lincRNA"; transcript_name "Gm37740-201"; exon_number 1; exon_id "ENSMUSE00001343774.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050338.1"; havana_transcript "OTTMUST00000127793.1";
mm10-chrY	HAVANA	exon	19983733	19983914	.	+	.	gene_id "ENSMUSG00000104506.5"; transcript_id "ENSMUST00000193523.5"; gene_type "lincRNA"; gene_name "Gm37740"; transcript_type "lincRNA"; transcript_name "Gm37740-201"; exon_number 2; exon_id "ENSMUSE00001337146.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050338.1"; havana_transcript "OTTMUST00000127793.1";
mm10-chrY	HAVANA	exon	19985353	19985421	.	+	.	gene_id "ENSMUSG00000104506.5"; transcript_id "ENSMUST00000193523.5"; gene_type "lincRNA"; gene_name "Gm37740"; transcript_type "lincRNA"; transcript_name "Gm37740-201"; exon_number 3; exon_id "ENSMUSE00001341356.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050338.1"; havana_transcript "OTTMUST00000127793.1";
mm10-chrY	HAVANA	transcript	19983060	19985421	.	+	.	gene_id "ENSMUSG00000104506.5"; transcript_id "ENSMUST00000194757.1"; gene_type "lincRNA"; gene_name "Gm37740"; transcript_type "lincRNA"; transcript_name "Gm37740-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050338.1"; havana_transcript "OTTMUST00000127794.1";
mm10-chrY	HAVANA	exon	19983060	19983245	.	+	.	gene_id "ENSMUSG00000104506.5"; transcript_id "ENSMUST00000194757.1"; gene_type "lincRNA"; gene_name "Gm37740"; transcript_type "lincRNA"; transcript_name "Gm37740-202"; exon_number 1; exon_id "ENSMUSE00001343774.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050338.1"; havana_transcript "OTTMUST00000127794.1";
mm10-chrY	HAVANA	exon	19983733	19983914	.	+	.	gene_id "ENSMUSG00000104506.5"; transcript_id "ENSMUST00000194757.1"; gene_type "lincRNA"; gene_name "Gm37740"; transcript_type "lincRNA"; transcript_name "Gm37740-202"; exon_number 2; exon_id "ENSMUSE00001337146.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050338.1"; havana_transcript "OTTMUST00000127794.1";
mm10-chrY	HAVANA	exon	19984642	19984825	.	+	.	gene_id "ENSMUSG00000104506.5"; transcript_id "ENSMUST00000194757.1"; gene_type "lincRNA"; gene_name "Gm37740"; transcript_type "lincRNA"; transcript_name "Gm37740-202"; exon_number 3; exon_id "ENSMUSE00001346358.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050338.1"; havana_transcript "OTTMUST00000127794.1";
mm10-chrY	HAVANA	exon	19985353	19985421	.	+	.	gene_id "ENSMUSG00000104506.5"; transcript_id "ENSMUST00000194757.1"; gene_type "lincRNA"; gene_name "Gm37740"; transcript_type "lincRNA"; transcript_name "Gm37740-202"; exon_number 4; exon_id "ENSMUSE00001341356.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050338.1"; havana_transcript "OTTMUST00000127794.1";
mm10-chrY	ENSEMBL	gene	20134948	20135057	.	+	.	gene_id "ENSMUSG00000098966.1"; gene_type "miRNA"; gene_name "Gm27701"; level 3;
mm10-chrY	ENSEMBL	transcript	20134948	20135057	.	+	.	gene_id "ENSMUSG00000098966.1"; transcript_id "ENSMUST00000184498.1"; gene_type "miRNA"; gene_name "Gm27701"; transcript_type "miRNA"; transcript_name "Gm27701-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	20134948	20135057	.	+	.	gene_id "ENSMUSG00000098966.1"; transcript_id "ENSMUST00000184498.1"; gene_type "miRNA"; gene_name "Gm27701"; transcript_type "miRNA"; transcript_name "Gm27701-201"; exon_number 1; exon_id "ENSMUSE00001071792.2"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	20430181	20430745	.	-	.	gene_id "ENSMUSG00000102913.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37723"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050348.1";
mm10-chrY	HAVANA	transcript	20430181	20430745	.	-	.	gene_id "ENSMUSG00000102913.1"; transcript_id "ENSMUST00000194480.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37723"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37723-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050348.1"; havana_transcript "OTTMUST00000127808.1";
mm10-chrY	HAVANA	exon	20430181	20430745	.	-	.	gene_id "ENSMUSG00000102913.1"; transcript_id "ENSMUST00000194480.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37723"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37723-201"; exon_number 1; exon_id "ENSMUSE00001344951.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050348.1"; havana_transcript "OTTMUST00000127808.1";
mm10-chrY	HAVANA	gene	20497512	20499791	.	+	.	gene_id "ENSMUSG00000103664.5"; gene_type "lincRNA"; gene_name "Gm36261"; level 2; havana_gene "OTTMUSG00000050339.1";
mm10-chrY	HAVANA	transcript	20497512	20499791	.	+	.	gene_id "ENSMUSG00000103664.5"; transcript_id "ENSMUST00000191807.5"; gene_type "lincRNA"; gene_name "Gm36261"; transcript_type "lincRNA"; transcript_name "Gm36261-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050339.1"; havana_transcript "OTTMUST00000127795.1";
mm10-chrY	HAVANA	exon	20497512	20497612	.	+	.	gene_id "ENSMUSG00000103664.5"; transcript_id "ENSMUST00000191807.5"; gene_type "lincRNA"; gene_name "Gm36261"; transcript_type "lincRNA"; transcript_name "Gm36261-201"; exon_number 1; exon_id "ENSMUSE00001337674.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050339.1"; havana_transcript "OTTMUST00000127795.1";
mm10-chrY	HAVANA	exon	20498100	20498281	.	+	.	gene_id "ENSMUSG00000103664.5"; transcript_id "ENSMUST00000191807.5"; gene_type "lincRNA"; gene_name "Gm36261"; transcript_type "lincRNA"; transcript_name "Gm36261-201"; exon_number 2; exon_id "ENSMUSE00001339639.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050339.1"; havana_transcript "OTTMUST00000127795.1";
mm10-chrY	HAVANA	exon	20499010	20499194	.	+	.	gene_id "ENSMUSG00000103664.5"; transcript_id "ENSMUST00000191807.5"; gene_type "lincRNA"; gene_name "Gm36261"; transcript_type "lincRNA"; transcript_name "Gm36261-201"; exon_number 3; exon_id "ENSMUSE00001338823.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050339.1"; havana_transcript "OTTMUST00000127795.1";
mm10-chrY	HAVANA	exon	20499723	20499791	.	+	.	gene_id "ENSMUSG00000103664.5"; transcript_id "ENSMUST00000191807.5"; gene_type "lincRNA"; gene_name "Gm36261"; transcript_type "lincRNA"; transcript_name "Gm36261-201"; exon_number 4; exon_id "ENSMUSE00001339017.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050339.1"; havana_transcript "OTTMUST00000127795.1";
mm10-chrY	HAVANA	transcript	20497512	20499791	.	+	.	gene_id "ENSMUSG00000103664.5"; transcript_id "ENSMUST00000193323.1"; gene_type "lincRNA"; gene_name "Gm36261"; transcript_type "lincRNA"; transcript_name "Gm36261-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050339.1"; havana_transcript "OTTMUST00000127796.1";
mm10-chrY	HAVANA	exon	20497512	20497612	.	+	.	gene_id "ENSMUSG00000103664.5"; transcript_id "ENSMUST00000193323.1"; gene_type "lincRNA"; gene_name "Gm36261"; transcript_type "lincRNA"; transcript_name "Gm36261-202"; exon_number 1; exon_id "ENSMUSE00001337674.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050339.1"; havana_transcript "OTTMUST00000127796.1";
mm10-chrY	HAVANA	exon	20498100	20498281	.	+	.	gene_id "ENSMUSG00000103664.5"; transcript_id "ENSMUST00000193323.1"; gene_type "lincRNA"; gene_name "Gm36261"; transcript_type "lincRNA"; transcript_name "Gm36261-202"; exon_number 2; exon_id "ENSMUSE00001339639.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050339.1"; havana_transcript "OTTMUST00000127796.1";
mm10-chrY	HAVANA	exon	20499723	20499791	.	+	.	gene_id "ENSMUSG00000103664.5"; transcript_id "ENSMUST00000193323.1"; gene_type "lincRNA"; gene_name "Gm36261"; transcript_type "lincRNA"; transcript_name "Gm36261-202"; exon_number 3; exon_id "ENSMUSE00001339017.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050339.1"; havana_transcript "OTTMUST00000127796.1";
mm10-chrY	HAVANA	gene	20537098	20537625	.	+	.	gene_id "ENSMUSG00000103005.1"; gene_type "lincRNA"; gene_name "Gm37898"; level 2; havana_gene "OTTMUSG00000050308.1";
mm10-chrY	HAVANA	transcript	20537098	20537625	.	+	.	gene_id "ENSMUSG00000103005.1"; transcript_id "ENSMUST00000193781.1"; gene_type "lincRNA"; gene_name "Gm37898"; transcript_type "lincRNA"; transcript_name "Gm37898-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050308.1"; havana_transcript "OTTMUST00000127748.1";
mm10-chrY	HAVANA	exon	20537098	20537202	.	+	.	gene_id "ENSMUSG00000103005.1"; transcript_id "ENSMUST00000193781.1"; gene_type "lincRNA"; gene_name "Gm37898"; transcript_type "lincRNA"; transcript_name "Gm37898-201"; exon_number 1; exon_id "ENSMUSE00001345071.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050308.1"; havana_transcript "OTTMUST00000127748.1";
mm10-chrY	HAVANA	exon	20537557	20537625	.	+	.	gene_id "ENSMUSG00000103005.1"; transcript_id "ENSMUST00000193781.1"; gene_type "lincRNA"; gene_name "Gm37898"; transcript_type "lincRNA"; transcript_name "Gm37898-201"; exon_number 2; exon_id "ENSMUSE00001341585.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050308.1"; havana_transcript "OTTMUST00000127748.1";
mm10-chrY	HAVANA	gene	20559991	20562355	.	+	.	gene_id "ENSMUSG00000103752.5"; gene_type "lincRNA"; gene_name "Gm36467"; level 2; havana_gene "OTTMUSG00000050340.1";
mm10-chrY	HAVANA	transcript	20559991	20562355	.	+	.	gene_id "ENSMUSG00000103752.5"; transcript_id "ENSMUST00000195522.5"; gene_type "lincRNA"; gene_name "Gm36467"; transcript_type "lincRNA"; transcript_name "Gm36467-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050340.1"; havana_transcript "OTTMUST00000127797.1";
mm10-chrY	HAVANA	exon	20559991	20560176	.	+	.	gene_id "ENSMUSG00000103752.5"; transcript_id "ENSMUST00000195522.5"; gene_type "lincRNA"; gene_name "Gm36467"; transcript_type "lincRNA"; transcript_name "Gm36467-201"; exon_number 1; exon_id "ENSMUSE00001339984.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050340.1"; havana_transcript "OTTMUST00000127797.1";
mm10-chrY	HAVANA	exon	20560664	20560845	.	+	.	gene_id "ENSMUSG00000103752.5"; transcript_id "ENSMUST00000195522.5"; gene_type "lincRNA"; gene_name "Gm36467"; transcript_type "lincRNA"; transcript_name "Gm36467-201"; exon_number 2; exon_id "ENSMUSE00001343361.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050340.1"; havana_transcript "OTTMUST00000127797.1";
mm10-chrY	HAVANA	exon	20562287	20562355	.	+	.	gene_id "ENSMUSG00000103752.5"; transcript_id "ENSMUST00000195522.5"; gene_type "lincRNA"; gene_name "Gm36467"; transcript_type "lincRNA"; transcript_name "Gm36467-201"; exon_number 3; exon_id "ENSMUSE00001343573.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050340.1"; havana_transcript "OTTMUST00000127797.1";
mm10-chrY	HAVANA	transcript	20559991	20562355	.	+	.	gene_id "ENSMUSG00000103752.5"; transcript_id "ENSMUST00000195606.1"; gene_type "lincRNA"; gene_name "Gm36467"; transcript_type "lincRNA"; transcript_name "Gm36467-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050340.1"; havana_transcript "OTTMUST00000127798.1";
mm10-chrY	HAVANA	exon	20559991	20560176	.	+	.	gene_id "ENSMUSG00000103752.5"; transcript_id "ENSMUST00000195606.1"; gene_type "lincRNA"; gene_name "Gm36467"; transcript_type "lincRNA"; transcript_name "Gm36467-202"; exon_number 1; exon_id "ENSMUSE00001339984.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050340.1"; havana_transcript "OTTMUST00000127798.1";
mm10-chrY	HAVANA	exon	20560664	20560845	.	+	.	gene_id "ENSMUSG00000103752.5"; transcript_id "ENSMUST00000195606.1"; gene_type "lincRNA"; gene_name "Gm36467"; transcript_type "lincRNA"; transcript_name "Gm36467-202"; exon_number 2; exon_id "ENSMUSE00001343361.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050340.1"; havana_transcript "OTTMUST00000127798.1";
mm10-chrY	HAVANA	exon	20561574	20561758	.	+	.	gene_id "ENSMUSG00000103752.5"; transcript_id "ENSMUST00000195606.1"; gene_type "lincRNA"; gene_name "Gm36467"; transcript_type "lincRNA"; transcript_name "Gm36467-202"; exon_number 3; exon_id "ENSMUSE00001337716.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050340.1"; havana_transcript "OTTMUST00000127798.1";
mm10-chrY	HAVANA	exon	20562287	20562355	.	+	.	gene_id "ENSMUSG00000103752.5"; transcript_id "ENSMUST00000195606.1"; gene_type "lincRNA"; gene_name "Gm36467"; transcript_type "lincRNA"; transcript_name "Gm36467-202"; exon_number 4; exon_id "ENSMUSE00001343573.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050340.1"; havana_transcript "OTTMUST00000127798.1";
mm10-chrY	HAVANA	gene	20603914	20604441	.	+	.	gene_id "ENSMUSG00000102551.1"; gene_type "lincRNA"; gene_name "Gm37927"; level 2; havana_gene "OTTMUSG00000050309.1";
mm10-chrY	HAVANA	transcript	20603914	20604441	.	+	.	gene_id "ENSMUSG00000102551.1"; transcript_id "ENSMUST00000192238.1"; gene_type "lincRNA"; gene_name "Gm37927"; transcript_type "lincRNA"; transcript_name "Gm37927-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050309.1"; havana_transcript "OTTMUST00000127749.1";
mm10-chrY	HAVANA	exon	20603914	20604018	.	+	.	gene_id "ENSMUSG00000102551.1"; transcript_id "ENSMUST00000192238.1"; gene_type "lincRNA"; gene_name "Gm37927"; transcript_type "lincRNA"; transcript_name "Gm37927-201"; exon_number 1; exon_id "ENSMUSE00001344413.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050309.1"; havana_transcript "OTTMUST00000127749.1";
mm10-chrY	HAVANA	exon	20604373	20604441	.	+	.	gene_id "ENSMUSG00000102551.1"; transcript_id "ENSMUST00000192238.1"; gene_type "lincRNA"; gene_name "Gm37927"; transcript_type "lincRNA"; transcript_name "Gm37927-201"; exon_number 2; exon_id "ENSMUSE00001340859.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050309.1"; havana_transcript "OTTMUST00000127749.1";
mm10-chrY	HAVANA	gene	20698839	20729217	.	+	.	gene_id "ENSMUSG00000102255.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36891"; level 2; havana_gene "OTTMUSG00000050224.1";
mm10-chrY	HAVANA	transcript	20698839	20729217	.	+	.	gene_id "ENSMUSG00000102255.1"; transcript_id "ENSMUST00000191995.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36891-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050224.1"; havana_transcript "OTTMUST00000127604.1";
mm10-chrY	HAVANA	exon	20698839	20698947	.	+	.	gene_id "ENSMUSG00000102255.1"; transcript_id "ENSMUST00000191995.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36891-201"; exon_number 1; exon_id "ENSMUSE00001341022.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050224.1"; havana_transcript "OTTMUST00000127604.1";
mm10-chrY	HAVANA	exon	20710281	20710347	.	+	.	gene_id "ENSMUSG00000102255.1"; transcript_id "ENSMUST00000191995.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36891-201"; exon_number 2; exon_id "ENSMUSE00001344611.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050224.1"; havana_transcript "OTTMUST00000127604.1";
mm10-chrY	HAVANA	exon	20710900	20710934	.	+	.	gene_id "ENSMUSG00000102255.1"; transcript_id "ENSMUST00000191995.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36891-201"; exon_number 3; exon_id "ENSMUSE00001336866.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050224.1"; havana_transcript "OTTMUST00000127604.1";
mm10-chrY	HAVANA	exon	20717928	20717994	.	+	.	gene_id "ENSMUSG00000102255.1"; transcript_id "ENSMUST00000191995.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36891-201"; exon_number 4; exon_id "ENSMUSE00001340523.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050224.1"; havana_transcript "OTTMUST00000127604.1";
mm10-chrY	HAVANA	exon	20718555	20718589	.	+	.	gene_id "ENSMUSG00000102255.1"; transcript_id "ENSMUST00000191995.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36891-201"; exon_number 5; exon_id "ENSMUSE00001336696.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050224.1"; havana_transcript "OTTMUST00000127604.1";
mm10-chrY	HAVANA	exon	20725753	20725870	.	+	.	gene_id "ENSMUSG00000102255.1"; transcript_id "ENSMUST00000191995.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36891-201"; exon_number 6; exon_id "ENSMUSE00001344236.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050224.1"; havana_transcript "OTTMUST00000127604.1";
mm10-chrY	HAVANA	exon	20726621	20726720	.	+	.	gene_id "ENSMUSG00000102255.1"; transcript_id "ENSMUST00000191995.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36891-201"; exon_number 7; exon_id "ENSMUSE00001339605.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050224.1"; havana_transcript "OTTMUST00000127604.1";
mm10-chrY	HAVANA	exon	20728736	20728832	.	+	.	gene_id "ENSMUSG00000102255.1"; transcript_id "ENSMUST00000191995.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36891-201"; exon_number 8; exon_id "ENSMUSE00001338508.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050224.1"; havana_transcript "OTTMUST00000127604.1";
mm10-chrY	HAVANA	exon	20729191	20729217	.	+	.	gene_id "ENSMUSG00000102255.1"; transcript_id "ENSMUST00000191995.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36891-201"; exon_number 9; exon_id "ENSMUSE00001345762.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050224.1"; havana_transcript "OTTMUST00000127604.1";
mm10-chrY	HAVANA	gene	20759357	20759803	.	+	.	gene_id "ENSMUSG00000103365.1"; gene_type "lincRNA"; gene_name "Gm36929"; level 2; havana_gene "OTTMUSG00000050178.1";
mm10-chrY	HAVANA	transcript	20759357	20759803	.	+	.	gene_id "ENSMUSG00000103365.1"; transcript_id "ENSMUST00000195152.1"; gene_type "lincRNA"; gene_name "Gm36929"; transcript_type "lincRNA"; transcript_name "Gm36929-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050178.1"; havana_transcript "OTTMUST00000127538.1";
mm10-chrY	HAVANA	exon	20759357	20759461	.	+	.	gene_id "ENSMUSG00000103365.1"; transcript_id "ENSMUST00000195152.1"; gene_type "lincRNA"; gene_name "Gm36929"; transcript_type "lincRNA"; transcript_name "Gm36929-201"; exon_number 1; exon_id "ENSMUSE00001344825.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050178.1"; havana_transcript "OTTMUST00000127538.1";
mm10-chrY	HAVANA	exon	20759743	20759803	.	+	.	gene_id "ENSMUSG00000103365.1"; transcript_id "ENSMUST00000195152.1"; gene_type "lincRNA"; gene_name "Gm36929"; transcript_type "lincRNA"; transcript_name "Gm36929-201"; exon_number 2; exon_id "ENSMUSE00001338561.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050178.1"; havana_transcript "OTTMUST00000127538.1";
mm10-chrY	HAVANA	gene	20791345	20794578	.	+	.	gene_id "ENSMUSG00000103829.5"; gene_type "lincRNA"; gene_name "Gm38174"; level 2; havana_gene "OTTMUSG00000050179.1";
mm10-chrY	HAVANA	transcript	20791345	20794578	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000191787.5"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127539.1";
mm10-chrY	HAVANA	exon	20791345	20791984	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000191787.5"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-201"; exon_number 1; exon_id "ENSMUSE00001338846.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127539.1";
mm10-chrY	HAVANA	exon	20792469	20792651	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000191787.5"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-201"; exon_number 2; exon_id "ENSMUSE00001341879.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127539.1";
mm10-chrY	HAVANA	exon	20793381	20793561	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000191787.5"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-201"; exon_number 3; exon_id "ENSMUSE00001346183.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127539.1";
mm10-chrY	HAVANA	exon	20794089	20794578	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000191787.5"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-201"; exon_number 4; exon_id "ENSMUSE00001337350.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127539.1";
mm10-chrY	HAVANA	transcript	20791799	20794154	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000193712.5"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127540.1";
mm10-chrY	HAVANA	exon	20791799	20791984	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000193712.5"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-202"; exon_number 1; exon_id "ENSMUSE00001338074.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127540.1";
mm10-chrY	HAVANA	exon	20792473	20792651	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000193712.5"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-202"; exon_number 2; exon_id "ENSMUSE00001337163.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127540.1";
mm10-chrY	HAVANA	exon	20793381	20793561	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000193712.5"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-202"; exon_number 3; exon_id "ENSMUSE00001346183.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127540.1";
mm10-chrY	HAVANA	exon	20794089	20794154	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000193712.5"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-202"; exon_number 4; exon_id "ENSMUSE00001342384.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127540.1";
mm10-chrY	HAVANA	transcript	20791799	20794154	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000194409.1"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127541.1";
mm10-chrY	HAVANA	exon	20791799	20791984	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000194409.1"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-203"; exon_number 1; exon_id "ENSMUSE00001338074.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127541.1";
mm10-chrY	HAVANA	exon	20792473	20792651	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000194409.1"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-203"; exon_number 2; exon_id "ENSMUSE00001337163.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127541.1";
mm10-chrY	HAVANA	exon	20794089	20794154	.	+	.	gene_id "ENSMUSG00000103829.5"; transcript_id "ENSMUST00000194409.1"; gene_type "lincRNA"; gene_name "Gm38174"; transcript_type "lincRNA"; transcript_name "Gm38174-203"; exon_number 3; exon_id "ENSMUSE00001342384.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050179.1"; havana_transcript "OTTMUST00000127541.1";
mm10-chrY	HAVANA	gene	20967477	20993657	.	-	.	gene_id "ENSMUSG00000102668.1"; gene_type "protein_coding"; gene_name "Gm29866"; level 2; havana_gene "OTTMUSG00000050180.1";
mm10-chrY	HAVANA	transcript	20967477	20993657	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	exon	20993614	20993657	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 1; exon_id "ENSMUSE00001346385.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	exon	20992122	20992253	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 2; exon_id "ENSMUSE00001341406.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	CDS	20992122	20992239	.	-	0	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 2; exon_id "ENSMUSE00001341406.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	start_codon	20992237	20992239	.	-	0	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 2; exon_id "ENSMUSE00001341406.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	exon	20986713	20986779	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 3; exon_id "ENSMUSE00001336213.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	CDS	20986713	20986779	.	-	2	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 3; exon_id "ENSMUSE00001336213.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	exon	20986016	20986050	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 4; exon_id "ENSMUSE00001345390.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	CDS	20986016	20986050	.	-	1	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 4; exon_id "ENSMUSE00001345390.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	exon	20978944	20979010	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 5; exon_id "ENSMUSE00001340647.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	CDS	20978944	20979010	.	-	2	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 5; exon_id "ENSMUSE00001340647.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	exon	20978333	20978367	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 6; exon_id "ENSMUSE00001344363.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	CDS	20978333	20978367	.	-	1	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 6; exon_id "ENSMUSE00001344363.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	exon	20971065	20971182	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 7; exon_id "ENSMUSE00001342022.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	CDS	20971065	20971182	.	-	2	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 7; exon_id "ENSMUSE00001342022.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	exon	20970205	20970304	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 8; exon_id "ENSMUSE00001339347.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	CDS	20970205	20970304	.	-	1	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 8; exon_id "ENSMUSE00001339347.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	exon	20968062	20968160	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 9; exon_id "ENSMUSE00001342093.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	CDS	20968062	20968160	.	-	0	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 9; exon_id "ENSMUSE00001342093.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	exon	20967477	20967702	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 10; exon_id "ENSMUSE00001339296.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	CDS	20967676	20967702	.	-	0	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 10; exon_id "ENSMUSE00001339296.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	stop_codon	20967673	20967675	.	-	0	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 10; exon_id "ENSMUSE00001339296.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	UTR	20993614	20993657	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 1; exon_id "ENSMUSE00001346385.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	UTR	20992240	20992253	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 2; exon_id "ENSMUSE00001341406.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	UTR	20967477	20967675	.	-	.	gene_id "ENSMUSG00000102668.1"; transcript_id "ENSMUST00000191675.1"; gene_type "protein_coding"; gene_name "Gm29866"; transcript_type "protein_coding"; transcript_name "Gm29866-201"; exon_number 10; exon_id "ENSMUSE00001339296.1"; level 2; protein_id "ENSMUSP00000141776.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050180.1"; havana_transcript "OTTMUST00000127542.1";
mm10-chrY	HAVANA	gene	21052482	21055721	.	-	.	gene_id "ENSMUSG00000104131.5"; gene_type "lincRNA"; gene_name "Gm36950"; level 2; havana_gene "OTTMUSG00000050181.1";
mm10-chrY	HAVANA	transcript	21052482	21055721	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000191738.5"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127543.1";
mm10-chrY	HAVANA	exon	21055082	21055721	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000191738.5"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-201"; exon_number 1; exon_id "ENSMUSE00001337380.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127543.1";
mm10-chrY	HAVANA	exon	21054411	21054596	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000191738.5"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-201"; exon_number 2; exon_id "ENSMUSE00001344055.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127543.1";
mm10-chrY	HAVANA	exon	21053498	21053681	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000191738.5"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-201"; exon_number 3; exon_id "ENSMUSE00001340348.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127543.1";
mm10-chrY	HAVANA	exon	21052482	21052970	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000191738.5"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-201"; exon_number 4; exon_id "ENSMUSE00001344733.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127543.1";
mm10-chrY	HAVANA	transcript	21052902	21055268	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000193541.5"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127544.1";
mm10-chrY	HAVANA	exon	21055082	21055268	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000193541.5"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-202"; exon_number 1; exon_id "ENSMUSE00001344810.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127544.1";
mm10-chrY	HAVANA	exon	21054411	21054592	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000193541.5"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-202"; exon_number 2; exon_id "ENSMUSE00001339241.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127544.1";
mm10-chrY	HAVANA	exon	21053498	21053681	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000193541.5"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-202"; exon_number 3; exon_id "ENSMUSE00001340348.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127544.1";
mm10-chrY	HAVANA	exon	21052902	21052970	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000193541.5"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-202"; exon_number 4; exon_id "ENSMUSE00001341344.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127544.1";
mm10-chrY	HAVANA	transcript	21052902	21055268	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000194878.1"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-203"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127545.1";
mm10-chrY	HAVANA	exon	21055082	21055268	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000194878.1"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-203"; exon_number 1; exon_id "ENSMUSE00001344810.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127545.1";
mm10-chrY	HAVANA	exon	21054411	21054592	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000194878.1"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-203"; exon_number 2; exon_id "ENSMUSE00001339241.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127545.1";
mm10-chrY	HAVANA	exon	21052902	21052970	.	-	.	gene_id "ENSMUSG00000104131.5"; transcript_id "ENSMUST00000194878.1"; gene_type "lincRNA"; gene_name "Gm36950"; transcript_type "lincRNA"; transcript_name "Gm36950-203"; exon_number 3; exon_id "ENSMUSE00001341344.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050181.1"; havana_transcript "OTTMUST00000127545.1";
mm10-chrY	HAVANA	gene	21096898	21097593	.	+	.	gene_id "ENSMUSG00000103023.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20910"; level 2; havana_gene "OTTMUSG00000050182.1";
mm10-chrY	HAVANA	transcript	21096898	21097593	.	+	.	gene_id "ENSMUSG00000103023.1"; transcript_id "ENSMUST00000193268.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20910"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20910-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050182.1"; havana_transcript "OTTMUST00000127546.1";
mm10-chrY	HAVANA	exon	21096898	21097593	.	+	.	gene_id "ENSMUSG00000103023.1"; transcript_id "ENSMUST00000193268.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20910"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20910-201"; exon_number 1; exon_id "ENSMUSE00001339385.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050182.1"; havana_transcript "OTTMUST00000127546.1";
mm10-chrY	HAVANA	gene	21133838	21134452	.	+	.	gene_id "ENSMUSG00000103689.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30598"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050183.1";
mm10-chrY	HAVANA	transcript	21133838	21134452	.	+	.	gene_id "ENSMUSG00000103689.1"; transcript_id "ENSMUST00000192620.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30598"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30598-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050183.1"; havana_transcript "OTTMUST00000127547.1";
mm10-chrY	HAVANA	exon	21133838	21134452	.	+	.	gene_id "ENSMUSG00000103689.1"; transcript_id "ENSMUST00000192620.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30598"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30598-201"; exon_number 1; exon_id "ENSMUSE00001337945.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050183.1"; havana_transcript "OTTMUST00000127547.1";
mm10-chrY	HAVANA	gene	21164570	21166905	.	+	.	gene_id "ENSMUSG00000094294.2"; gene_type "protein_coding"; gene_name "Gm20909"; level 2; havana_gene "OTTMUSG00000042963.1";
mm10-chrY	HAVANA	transcript	21164570	21166905	.	+	.	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000181205.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-202"; level 2; protein_id "ENSMUSP00000137876.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1"; havana_transcript "OTTMUST00000112798.1";
mm10-chrY	HAVANA	exon	21164570	21164688	.	+	.	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000181205.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-202"; exon_number 1; exon_id "ENSMUSE00001127895.1"; level 2; protein_id "ENSMUSP00000137876.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1"; havana_transcript "OTTMUST00000112798.1";
mm10-chrY	HAVANA	exon	21165802	21166905	.	+	.	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000181205.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-202"; exon_number 2; exon_id "ENSMUSE00001121548.1"; level 2; protein_id "ENSMUSP00000137876.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1"; havana_transcript "OTTMUST00000112798.1";
mm10-chrY	HAVANA	CDS	21166083	21166763	.	+	0	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000181205.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-202"; exon_number 2; exon_id "ENSMUSE00001121548.1"; level 2; protein_id "ENSMUSP00000137876.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1"; havana_transcript "OTTMUST00000112798.1";
mm10-chrY	HAVANA	start_codon	21166083	21166085	.	+	0	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000181205.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-202"; exon_number 2; exon_id "ENSMUSE00001121548.1"; level 2; protein_id "ENSMUSP00000137876.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1"; havana_transcript "OTTMUST00000112798.1";
mm10-chrY	HAVANA	stop_codon	21166764	21166766	.	+	0	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000181205.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-202"; exon_number 2; exon_id "ENSMUSE00001121548.1"; level 2; protein_id "ENSMUSP00000137876.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1"; havana_transcript "OTTMUST00000112798.1";
mm10-chrY	HAVANA	UTR	21164570	21164688	.	+	.	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000181205.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-202"; exon_number 1; exon_id "ENSMUSE00001127895.1"; level 2; protein_id "ENSMUSP00000137876.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1"; havana_transcript "OTTMUST00000112798.1";
mm10-chrY	HAVANA	UTR	21165802	21166082	.	+	.	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000181205.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-202"; exon_number 2; exon_id "ENSMUSE00001121548.1"; level 2; protein_id "ENSMUSP00000137876.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1"; havana_transcript "OTTMUST00000112798.1";
mm10-chrY	HAVANA	UTR	21166764	21166905	.	+	.	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000181205.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-202"; exon_number 2; exon_id "ENSMUSE00001121548.1"; level 2; protein_id "ENSMUSP00000137876.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1"; havana_transcript "OTTMUST00000112798.1";
mm10-chrY	ENSEMBL	transcript	21166083	21166766	.	+	.	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000178234.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-201"; level 3; protein_id "ENSMUSP00000137500.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1";
mm10-chrY	ENSEMBL	exon	21166083	21166766	.	+	.	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000178234.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-201"; exon_number 1; exon_id "ENSMUSE00000987037.1"; level 3; protein_id "ENSMUSP00000137500.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1";
mm10-chrY	ENSEMBL	CDS	21166083	21166763	.	+	0	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000178234.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-201"; exon_number 1; exon_id "ENSMUSE00000987037.1"; level 3; protein_id "ENSMUSP00000137500.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1";
mm10-chrY	ENSEMBL	start_codon	21166083	21166085	.	+	0	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000178234.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-201"; exon_number 1; exon_id "ENSMUSE00000987037.1"; level 3; protein_id "ENSMUSP00000137500.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1";
mm10-chrY	ENSEMBL	stop_codon	21166764	21166766	.	+	0	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000178234.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-201"; exon_number 1; exon_id "ENSMUSE00000987037.1"; level 3; protein_id "ENSMUSP00000137500.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1";
mm10-chrY	ENSEMBL	UTR	21166764	21166766	.	+	.	gene_id "ENSMUSG00000094294.2"; transcript_id "ENSMUST00000178234.1"; gene_type "protein_coding"; gene_name "Gm20909"; transcript_type "protein_coding"; transcript_name "Gm20909-201"; exon_number 1; exon_id "ENSMUSE00000987037.1"; level 3; protein_id "ENSMUSP00000137500.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000042963.1";
mm10-chrY	HAVANA	gene	21241575	21243910	.	+	.	gene_id "ENSMUSG00000093848.2"; gene_type "protein_coding"; gene_name "Gm20865"; level 2; havana_gene "OTTMUSG00000042962.1";
mm10-chrY	HAVANA	transcript	21241575	21243910	.	+	.	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000181163.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-202"; level 2; protein_id "ENSMUSP00000138020.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1"; havana_transcript "OTTMUST00000112797.1";
mm10-chrY	HAVANA	exon	21241575	21241698	.	+	.	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000181163.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-202"; exon_number 1; exon_id "ENSMUSE00001132829.1"; level 2; protein_id "ENSMUSP00000138020.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1"; havana_transcript "OTTMUST00000112797.1";
mm10-chrY	HAVANA	exon	21242810	21243910	.	+	.	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000181163.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-202"; exon_number 2; exon_id "ENSMUSE00001141982.1"; level 2; protein_id "ENSMUSP00000138020.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1"; havana_transcript "OTTMUST00000112797.1";
mm10-chrY	HAVANA	CDS	21243092	21243772	.	+	0	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000181163.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-202"; exon_number 2; exon_id "ENSMUSE00001141982.1"; level 2; protein_id "ENSMUSP00000138020.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1"; havana_transcript "OTTMUST00000112797.1";
mm10-chrY	HAVANA	start_codon	21243092	21243094	.	+	0	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000181163.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-202"; exon_number 2; exon_id "ENSMUSE00001141982.1"; level 2; protein_id "ENSMUSP00000138020.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1"; havana_transcript "OTTMUST00000112797.1";
mm10-chrY	HAVANA	stop_codon	21243773	21243775	.	+	0	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000181163.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-202"; exon_number 2; exon_id "ENSMUSE00001141982.1"; level 2; protein_id "ENSMUSP00000138020.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1"; havana_transcript "OTTMUST00000112797.1";
mm10-chrY	HAVANA	UTR	21241575	21241698	.	+	.	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000181163.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-202"; exon_number 1; exon_id "ENSMUSE00001132829.1"; level 2; protein_id "ENSMUSP00000138020.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1"; havana_transcript "OTTMUST00000112797.1";
mm10-chrY	HAVANA	UTR	21242810	21243091	.	+	.	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000181163.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-202"; exon_number 2; exon_id "ENSMUSE00001141982.1"; level 2; protein_id "ENSMUSP00000138020.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1"; havana_transcript "OTTMUST00000112797.1";
mm10-chrY	HAVANA	UTR	21243773	21243910	.	+	.	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000181163.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-202"; exon_number 2; exon_id "ENSMUSE00001141982.1"; level 2; protein_id "ENSMUSP00000138020.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1"; havana_transcript "OTTMUST00000112797.1";
mm10-chrY	ENSEMBL	transcript	21242966	21243821	.	+	.	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000179095.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-201"; level 3; protein_id "ENSMUSP00000136326.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1";
mm10-chrY	ENSEMBL	exon	21242966	21243821	.	+	.	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000179095.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-201"; exon_number 1; exon_id "ENSMUSE00001066728.1"; level 3; protein_id "ENSMUSP00000136326.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1";
mm10-chrY	ENSEMBL	CDS	21243092	21243772	.	+	0	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000179095.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-201"; exon_number 1; exon_id "ENSMUSE00001066728.1"; level 3; protein_id "ENSMUSP00000136326.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1";
mm10-chrY	ENSEMBL	start_codon	21243092	21243094	.	+	0	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000179095.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-201"; exon_number 1; exon_id "ENSMUSE00001066728.1"; level 3; protein_id "ENSMUSP00000136326.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1";
mm10-chrY	ENSEMBL	stop_codon	21243773	21243775	.	+	0	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000179095.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-201"; exon_number 1; exon_id "ENSMUSE00001066728.1"; level 3; protein_id "ENSMUSP00000136326.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1";
mm10-chrY	ENSEMBL	UTR	21242966	21243091	.	+	.	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000179095.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-201"; exon_number 1; exon_id "ENSMUSE00001066728.1"; level 3; protein_id "ENSMUSP00000136326.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1";
mm10-chrY	ENSEMBL	UTR	21243773	21243821	.	+	.	gene_id "ENSMUSG00000093848.2"; transcript_id "ENSMUST00000179095.1"; gene_type "protein_coding"; gene_name "Gm20865"; transcript_type "protein_coding"; transcript_name "Gm20865-201"; exon_number 1; exon_id "ENSMUSE00001066728.1"; level 3; protein_id "ENSMUSP00000136326.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85869.1"; havana_gene "OTTMUSG00000042962.1";
mm10-chrY	HAVANA	gene	21346236	21349473	.	-	.	gene_id "ENSMUSG00000102429.5"; gene_type "lincRNA"; gene_name "Gm37462"; level 2; havana_gene "OTTMUSG00000050184.1";
mm10-chrY	HAVANA	transcript	21346236	21349473	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000193386.5"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127548.1";
mm10-chrY	HAVANA	exon	21348835	21349473	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000193386.5"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-201"; exon_number 1; exon_id "ENSMUSE00001345342.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127548.1";
mm10-chrY	HAVANA	exon	21348164	21348349	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000193386.5"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-201"; exon_number 2; exon_id "ENSMUSE00001338657.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127548.1";
mm10-chrY	HAVANA	exon	21347251	21347434	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000193386.5"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-201"; exon_number 3; exon_id "ENSMUSE00001344542.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127548.1";
mm10-chrY	HAVANA	exon	21346236	21346724	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000193386.5"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-201"; exon_number 4; exon_id "ENSMUSE00001344450.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127548.1";
mm10-chrY	HAVANA	transcript	21346656	21349020	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000194672.5"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127549.1";
mm10-chrY	HAVANA	exon	21348835	21349020	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000194672.5"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-203"; exon_number 1; exon_id "ENSMUSE00001342356.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127549.1";
mm10-chrY	HAVANA	exon	21348164	21348345	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000194672.5"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-203"; exon_number 2; exon_id "ENSMUSE00001338887.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127549.1";
mm10-chrY	HAVANA	exon	21347251	21347434	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000194672.5"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-203"; exon_number 3; exon_id "ENSMUSE00001344542.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127549.1";
mm10-chrY	HAVANA	exon	21346656	21346724	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000194672.5"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-203"; exon_number 4; exon_id "ENSMUSE00001342396.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127549.1";
mm10-chrY	HAVANA	transcript	21346656	21349020	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000193841.1"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127550.1";
mm10-chrY	HAVANA	exon	21348835	21349020	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000193841.1"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-202"; exon_number 1; exon_id "ENSMUSE00001342356.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127550.1";
mm10-chrY	HAVANA	exon	21348164	21348345	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000193841.1"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-202"; exon_number 2; exon_id "ENSMUSE00001338887.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127550.1";
mm10-chrY	HAVANA	exon	21346656	21346724	.	-	.	gene_id "ENSMUSG00000102429.5"; transcript_id "ENSMUST00000193841.1"; gene_type "lincRNA"; gene_name "Gm37462"; transcript_type "lincRNA"; transcript_name "Gm37462-202"; exon_number 3; exon_id "ENSMUSE00001342396.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050184.1"; havana_transcript "OTTMUST00000127550.1";
mm10-chrY	HAVANA	gene	21389972	21390286	.	+	.	gene_id "ENSMUSG00000102849.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37658"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050185.1";
mm10-chrY	HAVANA	transcript	21389972	21390286	.	+	.	gene_id "ENSMUSG00000102849.1"; transcript_id "ENSMUST00000192672.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37658"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37658-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050185.1"; havana_transcript "OTTMUST00000127551.1";
mm10-chrY	HAVANA	exon	21389972	21390286	.	+	.	gene_id "ENSMUSG00000102849.1"; transcript_id "ENSMUST00000192672.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37658"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37658-201"; exon_number 1; exon_id "ENSMUSE00001342484.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050185.1"; havana_transcript "OTTMUST00000127551.1";
mm10-chrY	HAVANA	gene	21426544	21427239	.	+	.	gene_id "ENSMUSG00000102513.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32347"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050186.1";
mm10-chrY	HAVANA	transcript	21426544	21427239	.	+	.	gene_id "ENSMUSG00000102513.1"; transcript_id "ENSMUST00000192944.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32347"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32347-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050186.1"; havana_transcript "OTTMUST00000127552.1";
mm10-chrY	HAVANA	exon	21426544	21427239	.	+	.	gene_id "ENSMUSG00000102513.1"; transcript_id "ENSMUST00000192944.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32347"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32347-201"; exon_number 1; exon_id "ENSMUSE00001345562.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050186.1"; havana_transcript "OTTMUST00000127552.1";
mm10-chrY	HAVANA	gene	21487904	21512364	.	-	.	gene_id "ENSMUSG00000102966.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31123"; level 2; havana_gene "OTTMUSG00000050191.1";
mm10-chrY	HAVANA	transcript	21487904	21512364	.	-	.	gene_id "ENSMUSG00000102966.1"; transcript_id "ENSMUST00000192094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31123-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050191.1"; havana_transcript "OTTMUST00000127560.1";
mm10-chrY	HAVANA	exon	21512247	21512364	.	-	.	gene_id "ENSMUSG00000102966.1"; transcript_id "ENSMUST00000192094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31123-201"; exon_number 1; exon_id "ENSMUSE00001344044.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050191.1"; havana_transcript "OTTMUST00000127560.1";
mm10-chrY	HAVANA	exon	21506846	21506912	.	-	.	gene_id "ENSMUSG00000102966.1"; transcript_id "ENSMUST00000192094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31123-201"; exon_number 2; exon_id "ENSMUSE00001342688.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050191.1"; havana_transcript "OTTMUST00000127560.1";
mm10-chrY	HAVANA	exon	21506217	21506251	.	-	.	gene_id "ENSMUSG00000102966.1"; transcript_id "ENSMUST00000192094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31123-201"; exon_number 3; exon_id "ENSMUSE00001346055.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050191.1"; havana_transcript "OTTMUST00000127560.1";
mm10-chrY	HAVANA	exon	21499191	21499257	.	-	.	gene_id "ENSMUSG00000102966.1"; transcript_id "ENSMUST00000192094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31123-201"; exon_number 4; exon_id "ENSMUSE00001337891.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050191.1"; havana_transcript "OTTMUST00000127560.1";
mm10-chrY	HAVANA	exon	21498579	21498613	.	-	.	gene_id "ENSMUSG00000102966.1"; transcript_id "ENSMUST00000192094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31123-201"; exon_number 5; exon_id "ENSMUSE00001340841.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050191.1"; havana_transcript "OTTMUST00000127560.1";
mm10-chrY	HAVANA	exon	21491300	21491417	.	-	.	gene_id "ENSMUSG00000102966.1"; transcript_id "ENSMUST00000192094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31123-201"; exon_number 6; exon_id "ENSMUSE00001339099.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050191.1"; havana_transcript "OTTMUST00000127560.1";
mm10-chrY	HAVANA	exon	21490429	21490528	.	-	.	gene_id "ENSMUSG00000102966.1"; transcript_id "ENSMUST00000192094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31123-201"; exon_number 7; exon_id "ENSMUSE00001344336.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050191.1"; havana_transcript "OTTMUST00000127560.1";
mm10-chrY	HAVANA	exon	21488290	21488388	.	-	.	gene_id "ENSMUSG00000102966.1"; transcript_id "ENSMUST00000192094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31123-201"; exon_number 8; exon_id "ENSMUSE00001341882.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050191.1"; havana_transcript "OTTMUST00000127560.1";
mm10-chrY	HAVANA	exon	21487904	21487930	.	-	.	gene_id "ENSMUSG00000102966.1"; transcript_id "ENSMUST00000192094.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31123-201"; exon_number 9; exon_id "ENSMUSE00001337941.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050191.1"; havana_transcript "OTTMUST00000127560.1";
mm10-chrY	HAVANA	gene	21572631	21575870	.	-	.	gene_id "ENSMUSG00000104425.5"; gene_type "lincRNA"; gene_name "Gm38370"; level 2; havana_gene "OTTMUSG00000050192.1";
mm10-chrY	HAVANA	transcript	21572631	21575870	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000192545.5"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127561.1";
mm10-chrY	HAVANA	exon	21575231	21575870	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000192545.5"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-201"; exon_number 1; exon_id "ENSMUSE00001337104.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127561.1";
mm10-chrY	HAVANA	exon	21574560	21574745	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000192545.5"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-201"; exon_number 2; exon_id "ENSMUSE00001342557.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127561.1";
mm10-chrY	HAVANA	exon	21573646	21573829	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000192545.5"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-201"; exon_number 3; exon_id "ENSMUSE00001336413.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127561.1";
mm10-chrY	HAVANA	exon	21572631	21573119	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000192545.5"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-201"; exon_number 4; exon_id "ENSMUSE00001337776.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127561.1";
mm10-chrY	HAVANA	transcript	21573051	21575417	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000194950.5"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127562.1";
mm10-chrY	HAVANA	exon	21575231	21575417	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000194950.5"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-203"; exon_number 1; exon_id "ENSMUSE00001336775.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127562.1";
mm10-chrY	HAVANA	exon	21574560	21574741	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000194950.5"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-203"; exon_number 2; exon_id "ENSMUSE00001336272.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127562.1";
mm10-chrY	HAVANA	exon	21573646	21573829	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000194950.5"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-203"; exon_number 3; exon_id "ENSMUSE00001336413.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127562.1";
mm10-chrY	HAVANA	exon	21573051	21573119	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000194950.5"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-203"; exon_number 4; exon_id "ENSMUSE00001339854.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127562.1";
mm10-chrY	HAVANA	transcript	21573051	21575417	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000193655.1"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127563.1";
mm10-chrY	HAVANA	exon	21575231	21575417	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000193655.1"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-202"; exon_number 1; exon_id "ENSMUSE00001336775.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127563.1";
mm10-chrY	HAVANA	exon	21574560	21574741	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000193655.1"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-202"; exon_number 2; exon_id "ENSMUSE00001336272.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127563.1";
mm10-chrY	HAVANA	exon	21573051	21573119	.	-	.	gene_id "ENSMUSG00000104425.5"; transcript_id "ENSMUST00000193655.1"; gene_type "lincRNA"; gene_name "Gm38370"; transcript_type "lincRNA"; transcript_name "Gm38370-202"; exon_number 3; exon_id "ENSMUSE00001339854.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050192.1"; havana_transcript "OTTMUST00000127563.1";
mm10-chrY	HAVANA	gene	21610496	21613843	.	+	.	gene_id "ENSMUSG00000102146.1"; gene_type "lincRNA"; gene_name "Gm38054"; level 2; havana_gene "OTTMUSG00000050193.1";
mm10-chrY	HAVANA	transcript	21610496	21613843	.	+	.	gene_id "ENSMUSG00000102146.1"; transcript_id "ENSMUST00000192380.1"; gene_type "lincRNA"; gene_name "Gm38054"; transcript_type "lincRNA"; transcript_name "Gm38054-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050193.1"; havana_transcript "OTTMUST00000127564.1";
mm10-chrY	HAVANA	exon	21610496	21610718	.	+	.	gene_id "ENSMUSG00000102146.1"; transcript_id "ENSMUST00000192380.1"; gene_type "lincRNA"; gene_name "Gm38054"; transcript_type "lincRNA"; transcript_name "Gm38054-201"; exon_number 1; exon_id "ENSMUSE00001339096.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050193.1"; havana_transcript "OTTMUST00000127564.1";
mm10-chrY	HAVANA	exon	21611900	21613843	.	+	.	gene_id "ENSMUSG00000102146.1"; transcript_id "ENSMUST00000192380.1"; gene_type "lincRNA"; gene_name "Gm38054"; transcript_type "lincRNA"; transcript_name "Gm38054-201"; exon_number 2; exon_id "ENSMUSE00001337673.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050193.1"; havana_transcript "OTTMUST00000127564.1";
mm10-chrY	HAVANA	gene	21619726	21620421	.	+	.	gene_id "ENSMUSG00000102159.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37476"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050194.1";
mm10-chrY	HAVANA	transcript	21619726	21620421	.	+	.	gene_id "ENSMUSG00000102159.1"; transcript_id "ENSMUST00000193046.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37476"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37476-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050194.1"; havana_transcript "OTTMUST00000127565.1";
mm10-chrY	HAVANA	exon	21619726	21620421	.	+	.	gene_id "ENSMUSG00000102159.1"; transcript_id "ENSMUST00000193046.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37476"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37476-201"; exon_number 1; exon_id "ENSMUSE00001345522.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050194.1"; havana_transcript "OTTMUST00000127565.1";
mm10-chrY	HAVANA	gene	21656866	21657480	.	+	.	gene_id "ENSMUSG00000102506.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37369"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050195.1";
mm10-chrY	HAVANA	transcript	21656866	21657480	.	+	.	gene_id "ENSMUSG00000102506.1"; transcript_id "ENSMUST00000194179.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37369"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37369-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050195.1"; havana_transcript "OTTMUST00000127566.1";
mm10-chrY	HAVANA	exon	21656866	21657480	.	+	.	gene_id "ENSMUSG00000102506.1"; transcript_id "ENSMUST00000194179.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37369"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37369-201"; exon_number 1; exon_id "ENSMUSE00001339547.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050195.1"; havana_transcript "OTTMUST00000127566.1";
mm10-chrY	HAVANA	gene	21686203	21686922	.	+	.	gene_id "ENSMUSG00000102826.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38181"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050196.1";
mm10-chrY	HAVANA	transcript	21686203	21686922	.	+	.	gene_id "ENSMUSG00000102826.1"; transcript_id "ENSMUST00000181357.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm38181"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38181-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050196.1"; havana_transcript "OTTMUST00000127567.1";
mm10-chrY	HAVANA	exon	21686203	21686922	.	+	.	gene_id "ENSMUSG00000102826.1"; transcript_id "ENSMUST00000181357.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm38181"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38181-201"; exon_number 1; exon_id "ENSMUSE00001181565.2"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050196.1"; havana_transcript "OTTMUST00000127567.1";
mm10-chrY	HAVANA	gene	21771563	21772255	.	+	.	gene_id "ENSMUSG00000102230.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31335"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050126.1";
mm10-chrY	HAVANA	transcript	21771563	21772255	.	+	.	gene_id "ENSMUSG00000102230.1"; transcript_id "ENSMUST00000193949.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31335"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31335-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050126.1"; havana_transcript "OTTMUST00000127454.1";
mm10-chrY	HAVANA	exon	21771563	21772255	.	+	.	gene_id "ENSMUSG00000102230.1"; transcript_id "ENSMUST00000193949.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31335"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31335-201"; exon_number 1; exon_id "ENSMUSE00001336463.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050126.1"; havana_transcript "OTTMUST00000127454.1";
mm10-chrY	HAVANA	gene	21891559	21894794	.	-	.	gene_id "ENSMUSG00000104345.5"; gene_type "lincRNA"; gene_name "Gm37690"; level 2; havana_gene "OTTMUSG00000050127.1";
mm10-chrY	HAVANA	transcript	21891559	21894794	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000192684.5"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127455.1";
mm10-chrY	HAVANA	exon	21894156	21894794	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000192684.5"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-202"; exon_number 1; exon_id "ENSMUSE00001340220.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127455.1";
mm10-chrY	HAVANA	exon	21893486	21893670	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000192684.5"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-202"; exon_number 2; exon_id "ENSMUSE00001344814.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127455.1";
mm10-chrY	HAVANA	exon	21892574	21892757	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000192684.5"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-202"; exon_number 3; exon_id "ENSMUSE00001336618.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127455.1";
mm10-chrY	HAVANA	exon	21891559	21892047	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000192684.5"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-202"; exon_number 4; exon_id "ENSMUSE00001340745.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127455.1";
mm10-chrY	HAVANA	transcript	21891983	21894341	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000193211.5"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127456.1";
mm10-chrY	HAVANA	exon	21894156	21894341	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000193211.5"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-203"; exon_number 1; exon_id "ENSMUSE00001340691.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127456.1";
mm10-chrY	HAVANA	exon	21893486	21893666	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000193211.5"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-203"; exon_number 2; exon_id "ENSMUSE00001342186.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127456.1";
mm10-chrY	HAVANA	exon	21892574	21892757	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000193211.5"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-203"; exon_number 3; exon_id "ENSMUSE00001336618.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127456.1";
mm10-chrY	HAVANA	exon	21891983	21892047	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000193211.5"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-203"; exon_number 4; exon_id "ENSMUSE00001337358.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127456.1";
mm10-chrY	HAVANA	transcript	21891983	21894341	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000192398.1"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127457.1";
mm10-chrY	HAVANA	exon	21894156	21894341	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000192398.1"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-201"; exon_number 1; exon_id "ENSMUSE00001340691.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127457.1";
mm10-chrY	HAVANA	exon	21893486	21893666	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000192398.1"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-201"; exon_number 2; exon_id "ENSMUSE00001342186.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127457.1";
mm10-chrY	HAVANA	exon	21891983	21892047	.	-	.	gene_id "ENSMUSG00000104345.5"; transcript_id "ENSMUST00000192398.1"; gene_type "lincRNA"; gene_name "Gm37690"; transcript_type "lincRNA"; transcript_name "Gm37690-201"; exon_number 3; exon_id "ENSMUSE00001337358.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050127.1"; havana_transcript "OTTMUST00000127457.1";
mm10-chrY	HAVANA	gene	21964371	21965066	.	+	.	gene_id "ENSMUSG00000102262.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38107"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050133.1";
mm10-chrY	HAVANA	transcript	21964371	21965066	.	+	.	gene_id "ENSMUSG00000102262.1"; transcript_id "ENSMUST00000194873.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38107"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38107-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050133.1"; havana_transcript "OTTMUST00000127473.1";
mm10-chrY	HAVANA	exon	21964371	21965066	.	+	.	gene_id "ENSMUSG00000102262.1"; transcript_id "ENSMUST00000194873.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38107"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38107-201"; exon_number 1; exon_id "ENSMUSE00001336906.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050133.1"; havana_transcript "OTTMUST00000127473.1";
mm10-chrY	HAVANA	gene	22025164	22051353	.	-	.	gene_id "ENSMUSG00000103528.1"; gene_type "protein_coding"; gene_name "Gm31571"; level 2; havana_gene "OTTMUSG00000050134.1";
mm10-chrY	HAVANA	transcript	22025164	22051353	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	exon	22051310	22051353	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 1; exon_id "ENSMUSE00001345337.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	exon	22049814	22049945	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 2; exon_id "ENSMUSE00001338514.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	CDS	22049814	22049931	.	-	0	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 2; exon_id "ENSMUSE00001338514.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	start_codon	22049929	22049931	.	-	0	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 2; exon_id "ENSMUSE00001338514.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	exon	22044447	22044513	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 3; exon_id "ENSMUSE00001338748.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	CDS	22044447	22044513	.	-	2	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 3; exon_id "ENSMUSE00001338748.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	exon	22043765	22043799	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 4; exon_id "ENSMUSE00001341454.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	CDS	22043765	22043799	.	-	1	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 4; exon_id "ENSMUSE00001341454.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	exon	22036649	22036715	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 5; exon_id "ENSMUSE00001342942.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	CDS	22036649	22036715	.	-	2	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 5; exon_id "ENSMUSE00001342942.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	exon	22036036	22036070	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 6; exon_id "ENSMUSE00001344408.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	CDS	22036036	22036070	.	-	1	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 6; exon_id "ENSMUSE00001344408.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	exon	22028752	22028869	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 7; exon_id "ENSMUSE00001341987.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	CDS	22028752	22028869	.	-	2	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 7; exon_id "ENSMUSE00001341987.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	exon	22027879	22027978	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 8; exon_id "ENSMUSE00001341531.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	CDS	22027879	22027978	.	-	1	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 8; exon_id "ENSMUSE00001341531.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	exon	22025748	22025846	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 9; exon_id "ENSMUSE00001336345.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	CDS	22025748	22025846	.	-	0	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 9; exon_id "ENSMUSE00001336345.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	exon	22025164	22025388	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 10; exon_id "ENSMUSE00001343297.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	CDS	22025362	22025388	.	-	0	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 10; exon_id "ENSMUSE00001343297.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	stop_codon	22025359	22025361	.	-	0	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 10; exon_id "ENSMUSE00001343297.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	UTR	22051310	22051353	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 1; exon_id "ENSMUSE00001345337.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	UTR	22049932	22049945	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 2; exon_id "ENSMUSE00001338514.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	UTR	22025164	22025361	.	-	.	gene_id "ENSMUSG00000103528.1"; transcript_id "ENSMUST00000192521.1"; gene_type "protein_coding"; gene_name "Gm31571"; transcript_type "protein_coding"; transcript_name "Gm31571-201"; exon_number 10; exon_id "ENSMUSE00001343297.1"; level 2; protein_id "ENSMUSP00000141784.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050134.1"; havana_transcript "OTTMUST00000127474.1";
mm10-chrY	HAVANA	gene	22109759	22112998	.	-	.	gene_id "ENSMUSG00000102772.5"; gene_type "lincRNA"; gene_name "Gm32114"; level 2; havana_gene "OTTMUSG00000050135.1";
mm10-chrY	HAVANA	transcript	22109759	22112998	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000195759.5"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127475.1";
mm10-chrY	HAVANA	exon	22112359	22112998	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000195759.5"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-203"; exon_number 1; exon_id "ENSMUSE00001337055.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127475.1";
mm10-chrY	HAVANA	exon	22111688	22111873	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000195759.5"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-203"; exon_number 2; exon_id "ENSMUSE00001342094.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127475.1";
mm10-chrY	HAVANA	exon	22110775	22110958	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000195759.5"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-203"; exon_number 3; exon_id "ENSMUSE00001345579.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127475.1";
mm10-chrY	HAVANA	exon	22109759	22110247	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000195759.5"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-203"; exon_number 4; exon_id "ENSMUSE00001339456.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127475.1";
mm10-chrY	HAVANA	transcript	22110179	22112545	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000193992.5"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127476.1";
mm10-chrY	HAVANA	exon	22112359	22112545	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000193992.5"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-201"; exon_number 1; exon_id "ENSMUSE00001343033.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127476.1";
mm10-chrY	HAVANA	exon	22111688	22111869	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000193992.5"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-201"; exon_number 2; exon_id "ENSMUSE00001343975.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127476.1";
mm10-chrY	HAVANA	exon	22110179	22110247	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000193992.5"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-201"; exon_number 3; exon_id "ENSMUSE00001337665.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127476.1";
mm10-chrY	HAVANA	transcript	22110179	22112545	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000195056.1"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127477.1";
mm10-chrY	HAVANA	exon	22112359	22112545	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000195056.1"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-202"; exon_number 1; exon_id "ENSMUSE00001343033.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127477.1";
mm10-chrY	HAVANA	exon	22111688	22111869	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000195056.1"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-202"; exon_number 2; exon_id "ENSMUSE00001343975.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127477.1";
mm10-chrY	HAVANA	exon	22110775	22110958	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000195056.1"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-202"; exon_number 3; exon_id "ENSMUSE00001345579.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127477.1";
mm10-chrY	HAVANA	exon	22110179	22110247	.	-	.	gene_id "ENSMUSG00000102772.5"; transcript_id "ENSMUST00000195056.1"; gene_type "lincRNA"; gene_name "Gm32114"; transcript_type "lincRNA"; transcript_name "Gm32114-202"; exon_number 4; exon_id "ENSMUSE00001337665.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050135.1"; havana_transcript "OTTMUST00000127477.1";
mm10-chrY	HAVANA	gene	22145145	22148488	.	+	.	gene_id "ENSMUSG00000103425.1"; gene_type "lincRNA"; gene_name "Gm37075"; level 2; havana_gene "OTTMUSG00000050136.1";
mm10-chrY	HAVANA	transcript	22145145	22148488	.	+	.	gene_id "ENSMUSG00000103425.1"; transcript_id "ENSMUST00000191888.1"; gene_type "lincRNA"; gene_name "Gm37075"; transcript_type "lincRNA"; transcript_name "Gm37075-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050136.1"; havana_transcript "OTTMUST00000127478.1";
mm10-chrY	HAVANA	exon	22145145	22145367	.	+	.	gene_id "ENSMUSG00000103425.1"; transcript_id "ENSMUST00000191888.1"; gene_type "lincRNA"; gene_name "Gm37075"; transcript_type "lincRNA"; transcript_name "Gm37075-201"; exon_number 1; exon_id "ENSMUSE00001344231.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050136.1"; havana_transcript "OTTMUST00000127478.1";
mm10-chrY	HAVANA	exon	22146546	22148488	.	+	.	gene_id "ENSMUSG00000103425.1"; transcript_id "ENSMUST00000191888.1"; gene_type "lincRNA"; gene_name "Gm37075"; transcript_type "lincRNA"; transcript_name "Gm37075-201"; exon_number 2; exon_id "ENSMUSE00001340370.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050136.1"; havana_transcript "OTTMUST00000127478.1";
mm10-chrY	HAVANA	gene	22154579	22155273	.	+	.	gene_id "ENSMUSG00000102486.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37921"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050137.1";
mm10-chrY	HAVANA	transcript	22154579	22155273	.	+	.	gene_id "ENSMUSG00000102486.1"; transcript_id "ENSMUST00000194333.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37921"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37921-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050137.1"; havana_transcript "OTTMUST00000127479.1";
mm10-chrY	HAVANA	exon	22154579	22155273	.	+	.	gene_id "ENSMUSG00000102486.1"; transcript_id "ENSMUST00000194333.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37921"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37921-201"; exon_number 1; exon_id "ENSMUSE00001341859.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050137.1"; havana_transcript "OTTMUST00000127479.1";
mm10-chrY	HAVANA	gene	22191469	22192083	.	+	.	gene_id "ENSMUSG00000103250.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32180"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050138.1";
mm10-chrY	HAVANA	transcript	22191469	22192083	.	+	.	gene_id "ENSMUSG00000103250.1"; transcript_id "ENSMUST00000192415.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32180"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32180-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050138.1"; havana_transcript "OTTMUST00000127480.1";
mm10-chrY	HAVANA	exon	22191469	22192083	.	+	.	gene_id "ENSMUSG00000103250.1"; transcript_id "ENSMUST00000192415.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm32180"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm32180-201"; exon_number 1; exon_id "ENSMUSE00001338383.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050138.1"; havana_transcript "OTTMUST00000127480.1";
mm10-chrY	HAVANA	gene	22403303	22406098	.	-	.	gene_id "ENSMUSG00000103077.5"; gene_type "lincRNA"; gene_name "Gm38371"; level 2; havana_gene "OTTMUSG00000050103.1";
mm10-chrY	HAVANA	transcript	22403303	22406098	.	-	.	gene_id "ENSMUSG00000103077.5"; transcript_id "ENSMUST00000193996.5"; gene_type "lincRNA"; gene_name "Gm38371"; transcript_type "lincRNA"; transcript_name "Gm38371-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050103.1"; havana_transcript "OTTMUST00000127424.1";
mm10-chrY	HAVANA	exon	22405502	22406098	.	-	.	gene_id "ENSMUSG00000103077.5"; transcript_id "ENSMUST00000193996.5"; gene_type "lincRNA"; gene_name "Gm38371"; transcript_type "lincRNA"; transcript_name "Gm38371-202"; exon_number 1; exon_id "ENSMUSE00001346331.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050103.1"; havana_transcript "OTTMUST00000127424.1";
mm10-chrY	HAVANA	exon	22405232	22405459	.	-	.	gene_id "ENSMUSG00000103077.5"; transcript_id "ENSMUST00000193996.5"; gene_type "lincRNA"; gene_name "Gm38371"; transcript_type "lincRNA"; transcript_name "Gm38371-202"; exon_number 2; exon_id "ENSMUSE00001338833.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050103.1"; havana_transcript "OTTMUST00000127424.1";
mm10-chrY	HAVANA	exon	22404318	22404501	.	-	.	gene_id "ENSMUSG00000103077.5"; transcript_id "ENSMUST00000193996.5"; gene_type "lincRNA"; gene_name "Gm38371"; transcript_type "lincRNA"; transcript_name "Gm38371-202"; exon_number 3; exon_id "ENSMUSE00001344816.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050103.1"; havana_transcript "OTTMUST00000127424.1";
mm10-chrY	HAVANA	exon	22403303	22403791	.	-	.	gene_id "ENSMUSG00000103077.5"; transcript_id "ENSMUST00000193996.5"; gene_type "lincRNA"; gene_name "Gm38371"; transcript_type "lincRNA"; transcript_name "Gm38371-202"; exon_number 4; exon_id "ENSMUSE00001336218.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050103.1"; havana_transcript "OTTMUST00000127424.1";
mm10-chrY	HAVANA	transcript	22403723	22405644	.	-	.	gene_id "ENSMUSG00000103077.5"; transcript_id "ENSMUST00000192472.1"; gene_type "lincRNA"; gene_name "Gm38371"; transcript_type "lincRNA"; transcript_name "Gm38371-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050103.1"; havana_transcript "OTTMUST00000127425.1";
mm10-chrY	HAVANA	exon	22405502	22405644	.	-	.	gene_id "ENSMUSG00000103077.5"; transcript_id "ENSMUST00000192472.1"; gene_type "lincRNA"; gene_name "Gm38371"; transcript_type "lincRNA"; transcript_name "Gm38371-201"; exon_number 1; exon_id "ENSMUSE00001339821.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050103.1"; havana_transcript "OTTMUST00000127425.1";
mm10-chrY	HAVANA	exon	22405232	22405459	.	-	.	gene_id "ENSMUSG00000103077.5"; transcript_id "ENSMUST00000192472.1"; gene_type "lincRNA"; gene_name "Gm38371"; transcript_type "lincRNA"; transcript_name "Gm38371-201"; exon_number 2; exon_id "ENSMUSE00001338833.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050103.1"; havana_transcript "OTTMUST00000127425.1";
mm10-chrY	HAVANA	exon	22403723	22403791	.	-	.	gene_id "ENSMUSG00000103077.5"; transcript_id "ENSMUST00000192472.1"; gene_type "lincRNA"; gene_name "Gm38371"; transcript_type "lincRNA"; transcript_name "Gm38371-201"; exon_number 3; exon_id "ENSMUSE00001342931.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050103.1"; havana_transcript "OTTMUST00000127425.1";
mm10-chrY	HAVANA	gene	22438028	22441376	.	+	.	gene_id "ENSMUSG00000103787.1"; gene_type "lincRNA"; gene_name "Gm37657"; level 2; havana_gene "OTTMUSG00000050104.1";
mm10-chrY	HAVANA	transcript	22438028	22441376	.	+	.	gene_id "ENSMUSG00000103787.1"; transcript_id "ENSMUST00000195425.1"; gene_type "lincRNA"; gene_name "Gm37657"; transcript_type "lincRNA"; transcript_name "Gm37657-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050104.1"; havana_transcript "OTTMUST00000127426.1";
mm10-chrY	HAVANA	exon	22438028	22438250	.	+	.	gene_id "ENSMUSG00000103787.1"; transcript_id "ENSMUST00000195425.1"; gene_type "lincRNA"; gene_name "Gm37657"; transcript_type "lincRNA"; transcript_name "Gm37657-201"; exon_number 1; exon_id "ENSMUSE00001340656.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050104.1"; havana_transcript "OTTMUST00000127426.1";
mm10-chrY	HAVANA	exon	22439431	22441376	.	+	.	gene_id "ENSMUSG00000103787.1"; transcript_id "ENSMUST00000195425.1"; gene_type "lincRNA"; gene_name "Gm37657"; transcript_type "lincRNA"; transcript_name "Gm37657-201"; exon_number 2; exon_id "ENSMUSE00001339968.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050104.1"; havana_transcript "OTTMUST00000127426.1";
mm10-chrY	HAVANA	gene	22447275	22447971	.	+	.	gene_id "ENSMUSG00000103987.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37448"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050105.1";
mm10-chrY	HAVANA	transcript	22447275	22447971	.	+	.	gene_id "ENSMUSG00000103987.1"; transcript_id "ENSMUST00000192795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37448"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37448-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050105.1"; havana_transcript "OTTMUST00000127427.1";
mm10-chrY	HAVANA	exon	22447275	22447971	.	+	.	gene_id "ENSMUSG00000103987.1"; transcript_id "ENSMUST00000192795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37448"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37448-201"; exon_number 1; exon_id "ENSMUSE00001345887.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050105.1"; havana_transcript "OTTMUST00000127427.1";
mm10-chrY	HAVANA	gene	22484124	22484737	.	+	.	gene_id "ENSMUSG00000103063.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33163"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050106.1";
mm10-chrY	HAVANA	transcript	22484124	22484737	.	+	.	gene_id "ENSMUSG00000103063.1"; transcript_id "ENSMUST00000194504.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33163"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33163-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050106.1"; havana_transcript "OTTMUST00000127428.1";
mm10-chrY	HAVANA	exon	22484124	22484737	.	+	.	gene_id "ENSMUSG00000103063.1"; transcript_id "ENSMUST00000194504.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33163"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33163-201"; exon_number 1; exon_id "ENSMUSE00001344906.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050106.1"; havana_transcript "OTTMUST00000127428.1";
mm10-chrY	HAVANA	gene	22513860	22514555	.	+	.	gene_id "ENSMUSG00000102957.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21065"; level 2; havana_gene "OTTMUSG00000050107.1";
mm10-chrY	HAVANA	transcript	22513860	22514555	.	+	.	gene_id "ENSMUSG00000102957.1"; transcript_id "ENSMUST00000191793.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21065"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21065-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050107.1"; havana_transcript "OTTMUST00000127429.1";
mm10-chrY	HAVANA	exon	22513860	22514555	.	+	.	gene_id "ENSMUSG00000102957.1"; transcript_id "ENSMUST00000191793.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21065"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21065-201"; exon_number 1; exon_id "ENSMUSE00001345100.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050107.1"; havana_transcript "OTTMUST00000127429.1";
mm10-chrY	HAVANA	gene	22588411	22589106	.	+	.	gene_id "ENSMUSG00000103269.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36978"; level 2; havana_gene "OTTMUSG00000050108.1";
mm10-chrY	HAVANA	transcript	22588411	22589106	.	+	.	gene_id "ENSMUSG00000103269.1"; transcript_id "ENSMUST00000195734.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36978"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36978-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050108.1"; havana_transcript "OTTMUST00000127430.1";
mm10-chrY	HAVANA	exon	22588411	22589106	.	+	.	gene_id "ENSMUSG00000103269.1"; transcript_id "ENSMUST00000195734.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36978"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36978-201"; exon_number 1; exon_id "ENSMUSE00001342196.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050108.1"; havana_transcript "OTTMUST00000127430.1";
mm10-chrY	HAVANA	gene	22696442	22699679	.	-	.	gene_id "ENSMUSG00000103954.5"; gene_type "lincRNA"; gene_name "Gm37721"; level 2; havana_gene "OTTMUSG00000050109.1";
mm10-chrY	HAVANA	transcript	22696442	22699679	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000194673.5"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127431.1";
mm10-chrY	HAVANA	exon	22699041	22699679	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000194673.5"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-202"; exon_number 1; exon_id "ENSMUSE00001342423.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127431.1";
mm10-chrY	HAVANA	exon	22698370	22698555	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000194673.5"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-202"; exon_number 2; exon_id "ENSMUSE00001340104.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127431.1";
mm10-chrY	HAVANA	exon	22697457	22697640	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000194673.5"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-202"; exon_number 3; exon_id "ENSMUSE00001338308.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127431.1";
mm10-chrY	HAVANA	exon	22696442	22696930	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000194673.5"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-202"; exon_number 4; exon_id "ENSMUSE00001342437.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127431.1";
mm10-chrY	HAVANA	transcript	22696862	22699226	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000195281.5"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127432.1";
mm10-chrY	HAVANA	exon	22699041	22699226	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000195281.5"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-203"; exon_number 1; exon_id "ENSMUSE00001338759.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127432.1";
mm10-chrY	HAVANA	exon	22698370	22698551	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000195281.5"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-203"; exon_number 2; exon_id "ENSMUSE00001344760.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127432.1";
mm10-chrY	HAVANA	exon	22696862	22696930	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000195281.5"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-203"; exon_number 3; exon_id "ENSMUSE00001340988.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127432.1";
mm10-chrY	HAVANA	transcript	22696862	22699226	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000192444.1"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127433.1";
mm10-chrY	HAVANA	exon	22699041	22699226	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000192444.1"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-201"; exon_number 1; exon_id "ENSMUSE00001338759.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127433.1";
mm10-chrY	HAVANA	exon	22698370	22698551	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000192444.1"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-201"; exon_number 2; exon_id "ENSMUSE00001344760.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127433.1";
mm10-chrY	HAVANA	exon	22697457	22697640	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000192444.1"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-201"; exon_number 3; exon_id "ENSMUSE00001338308.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127433.1";
mm10-chrY	HAVANA	exon	22696862	22696930	.	-	.	gene_id "ENSMUSG00000103954.5"; transcript_id "ENSMUST00000192444.1"; gene_type "lincRNA"; gene_name "Gm37721"; transcript_type "lincRNA"; transcript_name "Gm37721-201"; exon_number 4; exon_id "ENSMUSE00001340988.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050109.1"; havana_transcript "OTTMUST00000127433.1";
mm10-chrY	HAVANA	gene	22737573	22737887	.	+	.	gene_id "ENSMUSG00000103894.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37129"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050110.1";
mm10-chrY	HAVANA	transcript	22737573	22737887	.	+	.	gene_id "ENSMUSG00000103894.1"; transcript_id "ENSMUST00000195791.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37129"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37129-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050110.1"; havana_transcript "OTTMUST00000127434.1";
mm10-chrY	HAVANA	exon	22737573	22737887	.	+	.	gene_id "ENSMUSG00000103894.1"; transcript_id "ENSMUST00000195791.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37129"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37129-201"; exon_number 1; exon_id "ENSMUSE00001336660.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050110.1"; havana_transcript "OTTMUST00000127434.1";
mm10-chrY	HAVANA	gene	22774088	22774783	.	+	.	gene_id "ENSMUSG00000103795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37990"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050111.1";
mm10-chrY	HAVANA	transcript	22774088	22774783	.	+	.	gene_id "ENSMUSG00000103795.1"; transcript_id "ENSMUST00000195821.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37990"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37990-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050111.1"; havana_transcript "OTTMUST00000127435.1";
mm10-chrY	HAVANA	exon	22774088	22774783	.	+	.	gene_id "ENSMUSG00000103795.1"; transcript_id "ENSMUST00000195821.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37990"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37990-201"; exon_number 1; exon_id "ENSMUSE00001344644.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050111.1"; havana_transcript "OTTMUST00000127435.1";
mm10-chrY	HAVANA	gene	22835086	22861256	.	-	.	gene_id "ENSMUSG00000103919.1"; gene_type "protein_coding"; gene_name "Gm21366"; level 2; havana_gene "OTTMUSG00000050112.1";
mm10-chrY	HAVANA	transcript	22835086	22861256	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	exon	22861213	22861256	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 1; exon_id "ENSMUSE00001344197.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	exon	22859717	22859848	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 2; exon_id "ENSMUSE00001340599.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	CDS	22859717	22859834	.	-	0	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 2; exon_id "ENSMUSE00001340599.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	start_codon	22859832	22859834	.	-	0	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 2; exon_id "ENSMUSE00001340599.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	exon	22854320	22854386	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 3; exon_id "ENSMUSE00001338544.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	CDS	22854320	22854386	.	-	2	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 3; exon_id "ENSMUSE00001338544.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	exon	22853642	22853676	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 4; exon_id "ENSMUSE00001341223.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	CDS	22853642	22853676	.	-	1	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 4; exon_id "ENSMUSE00001341223.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	exon	22846554	22846620	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 5; exon_id "ENSMUSE00001340180.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	CDS	22846554	22846620	.	-	2	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 5; exon_id "ENSMUSE00001340180.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	exon	22845940	22845974	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 6; exon_id "ENSMUSE00001336549.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	CDS	22845940	22845974	.	-	1	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 6; exon_id "ENSMUSE00001336549.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	exon	22838674	22838791	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 7; exon_id "ENSMUSE00001344394.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	CDS	22838674	22838791	.	-	2	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 7; exon_id "ENSMUSE00001344394.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	exon	22837804	22837903	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 8; exon_id "ENSMUSE00001341799.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	CDS	22837804	22837903	.	-	1	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 8; exon_id "ENSMUSE00001341799.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	exon	22835671	22835769	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 9; exon_id "ENSMUSE00001338795.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	CDS	22835671	22835769	.	-	0	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 9; exon_id "ENSMUSE00001338795.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	exon	22835086	22835311	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 10; exon_id "ENSMUSE00001344084.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	CDS	22835285	22835311	.	-	0	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 10; exon_id "ENSMUSE00001344084.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	stop_codon	22835282	22835284	.	-	0	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 10; exon_id "ENSMUSE00001344084.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	UTR	22861213	22861256	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 1; exon_id "ENSMUSE00001344197.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	UTR	22859835	22859848	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 2; exon_id "ENSMUSE00001340599.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	UTR	22835086	22835284	.	-	.	gene_id "ENSMUSG00000103919.1"; transcript_id "ENSMUST00000192892.1"; gene_type "protein_coding"; gene_name "Gm21366"; transcript_type "protein_coding"; transcript_name "Gm21366-201"; exon_number 10; exon_id "ENSMUSE00001344084.1"; level 2; protein_id "ENSMUSP00000141418.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050112.1"; havana_transcript "OTTMUST00000127436.1";
mm10-chrY	HAVANA	gene	22920120	22923358	.	-	.	gene_id "ENSMUSG00000103812.5"; gene_type "lincRNA"; gene_name "Gm33954"; level 2; havana_gene "OTTMUSG00000050113.1";
mm10-chrY	HAVANA	transcript	22920120	22923358	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000195188.5"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127437.1";
mm10-chrY	HAVANA	exon	22922718	22923358	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000195188.5"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-202"; exon_number 1; exon_id "ENSMUSE00001342131.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127437.1";
mm10-chrY	HAVANA	exon	22922049	22922234	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000195188.5"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-202"; exon_number 2; exon_id "ENSMUSE00001346364.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127437.1";
mm10-chrY	HAVANA	exon	22921136	22921319	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000195188.5"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-202"; exon_number 3; exon_id "ENSMUSE00001337856.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127437.1";
mm10-chrY	HAVANA	exon	22920120	22920608	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000195188.5"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-202"; exon_number 4; exon_id "ENSMUSE00001341382.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127437.1";
mm10-chrY	HAVANA	transcript	22920540	22922904	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000195499.5"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127438.1";
mm10-chrY	HAVANA	exon	22922718	22922904	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000195499.5"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-203"; exon_number 1; exon_id "ENSMUSE00001339877.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127438.1";
mm10-chrY	HAVANA	exon	22922049	22922230	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000195499.5"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-203"; exon_number 2; exon_id "ENSMUSE00001337085.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127438.1";
mm10-chrY	HAVANA	exon	22920540	22920608	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000195499.5"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-203"; exon_number 3; exon_id "ENSMUSE00001340060.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127438.1";
mm10-chrY	HAVANA	transcript	22920540	22922904	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000191879.1"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127439.1";
mm10-chrY	HAVANA	exon	22922718	22922904	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000191879.1"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-201"; exon_number 1; exon_id "ENSMUSE00001339877.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127439.1";
mm10-chrY	HAVANA	exon	22922049	22922230	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000191879.1"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-201"; exon_number 2; exon_id "ENSMUSE00001337085.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127439.1";
mm10-chrY	HAVANA	exon	22921136	22921319	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000191879.1"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-201"; exon_number 3; exon_id "ENSMUSE00001337856.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127439.1";
mm10-chrY	HAVANA	exon	22920540	22920608	.	-	.	gene_id "ENSMUSG00000103812.5"; transcript_id "ENSMUST00000191879.1"; gene_type "lincRNA"; gene_name "Gm33954"; transcript_type "lincRNA"; transcript_name "Gm33954-201"; exon_number 4; exon_id "ENSMUSE00001340060.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050113.1"; havana_transcript "OTTMUST00000127439.1";
mm10-chrY	HAVANA	gene	22955350	22958699	.	+	.	gene_id "ENSMUSG00000104259.1"; gene_type "lincRNA"; gene_name "Gm37538"; level 2; havana_gene "OTTMUSG00000050114.1";
mm10-chrY	HAVANA	transcript	22955350	22958699	.	+	.	gene_id "ENSMUSG00000104259.1"; transcript_id "ENSMUST00000192417.1"; gene_type "lincRNA"; gene_name "Gm37538"; transcript_type "lincRNA"; transcript_name "Gm37538-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050114.1"; havana_transcript "OTTMUST00000127440.1";
mm10-chrY	HAVANA	exon	22955350	22955572	.	+	.	gene_id "ENSMUSG00000104259.1"; transcript_id "ENSMUST00000192417.1"; gene_type "lincRNA"; gene_name "Gm37538"; transcript_type "lincRNA"; transcript_name "Gm37538-201"; exon_number 1; exon_id "ENSMUSE00001340317.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050114.1"; havana_transcript "OTTMUST00000127440.1";
mm10-chrY	HAVANA	exon	22956755	22958699	.	+	.	gene_id "ENSMUSG00000104259.1"; transcript_id "ENSMUST00000192417.1"; gene_type "lincRNA"; gene_name "Gm37538"; transcript_type "lincRNA"; transcript_name "Gm37538-201"; exon_number 2; exon_id "ENSMUSE00001338128.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050114.1"; havana_transcript "OTTMUST00000127440.1";
mm10-chrY	HAVANA	gene	22964787	22965482	.	+	.	gene_id "ENSMUSG00000102487.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21871"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050115.1";
mm10-chrY	HAVANA	transcript	22964787	22965482	.	+	.	gene_id "ENSMUSG00000102487.1"; transcript_id "ENSMUST00000194621.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21871-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050115.1"; havana_transcript "OTTMUST00000127441.1";
mm10-chrY	HAVANA	exon	22964787	22965482	.	+	.	gene_id "ENSMUSG00000102487.1"; transcript_id "ENSMUST00000194621.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21871-201"; exon_number 1; exon_id "ENSMUSE00001346117.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050115.1"; havana_transcript "OTTMUST00000127441.1";
mm10-chrY	HAVANA	gene	23001659	23002273	.	+	.	gene_id "ENSMUSG00000102847.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm34274"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050116.1";
mm10-chrY	HAVANA	transcript	23001659	23002273	.	+	.	gene_id "ENSMUSG00000102847.1"; transcript_id "ENSMUST00000195825.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm34274"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm34274-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050116.1"; havana_transcript "OTTMUST00000127442.1";
mm10-chrY	HAVANA	exon	23001659	23002273	.	+	.	gene_id "ENSMUSG00000102847.1"; transcript_id "ENSMUST00000195825.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm34274"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm34274-201"; exon_number 1; exon_id "ENSMUSE00001342617.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050116.1"; havana_transcript "OTTMUST00000127442.1";
mm10-chrY	HAVANA	gene	23013406	23014950	.	-	.	gene_id "ENSMUSG00000103773.1"; gene_type "lincRNA"; gene_name "Gm34217"; level 2; havana_gene "OTTMUSG00000050117.1";
mm10-chrY	HAVANA	transcript	23013406	23014950	.	-	.	gene_id "ENSMUSG00000103773.1"; transcript_id "ENSMUST00000193562.1"; gene_type "lincRNA"; gene_name "Gm34217"; transcript_type "lincRNA"; transcript_name "Gm34217-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050117.1"; havana_transcript "OTTMUST00000127443.1";
mm10-chrY	HAVANA	exon	23014733	23014950	.	-	.	gene_id "ENSMUSG00000103773.1"; transcript_id "ENSMUST00000193562.1"; gene_type "lincRNA"; gene_name "Gm34217"; transcript_type "lincRNA"; transcript_name "Gm34217-201"; exon_number 1; exon_id "ENSMUSE00001343369.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050117.1"; havana_transcript "OTTMUST00000127443.1";
mm10-chrY	HAVANA	exon	23013406	23013543	.	-	.	gene_id "ENSMUSG00000103773.1"; transcript_id "ENSMUST00000193562.1"; gene_type "lincRNA"; gene_name "Gm34217"; transcript_type "lincRNA"; transcript_name "Gm34217-201"; exon_number 2; exon_id "ENSMUSE00001336484.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050117.1"; havana_transcript "OTTMUST00000127443.1";
mm10-chrY	HAVANA	gene	23031235	23031930	.	+	.	gene_id "ENSMUSG00000102347.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21469"; level 2; havana_gene "OTTMUSG00000050118.1";
mm10-chrY	HAVANA	transcript	23031235	23031930	.	+	.	gene_id "ENSMUSG00000102347.1"; transcript_id "ENSMUST00000193164.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21469"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21469-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050118.1"; havana_transcript "OTTMUST00000127444.1";
mm10-chrY	HAVANA	exon	23031235	23031930	.	+	.	gene_id "ENSMUSG00000102347.1"; transcript_id "ENSMUST00000193164.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21469"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21469-201"; exon_number 1; exon_id "ENSMUSE00001338053.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050118.1"; havana_transcript "OTTMUST00000127444.1";
mm10-chrY	HAVANA	gene	23097865	23098560	.	+	.	gene_id "ENSMUSG00000104480.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21661"; level 2; havana_gene "OTTMUSG00000050119.1";
mm10-chrY	HAVANA	transcript	23097865	23098560	.	+	.	gene_id "ENSMUSG00000104480.1"; transcript_id "ENSMUST00000194101.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21661"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21661-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050119.1"; havana_transcript "OTTMUST00000127445.1";
mm10-chrY	HAVANA	exon	23097865	23098560	.	+	.	gene_id "ENSMUSG00000104480.1"; transcript_id "ENSMUST00000194101.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21661"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21661-201"; exon_number 1; exon_id "ENSMUSE00001338217.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050119.1"; havana_transcript "OTTMUST00000127445.1";
mm10-chrY	HAVANA	gene	23212218	23215455	.	-	.	gene_id "ENSMUSG00000104062.5"; gene_type "lincRNA"; gene_name "Gm37952"; level 2; havana_gene "OTTMUSG00000050120.1";
mm10-chrY	HAVANA	transcript	23212218	23215455	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192516.5"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127446.1";
mm10-chrY	HAVANA	exon	23214818	23215455	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192516.5"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-202"; exon_number 1; exon_id "ENSMUSE00001337340.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127446.1";
mm10-chrY	HAVANA	exon	23214147	23214332	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192516.5"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-202"; exon_number 2; exon_id "ENSMUSE00001339097.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127446.1";
mm10-chrY	HAVANA	exon	23213234	23213417	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192516.5"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-202"; exon_number 3; exon_id "ENSMUSE00001345344.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127446.1";
mm10-chrY	HAVANA	exon	23212218	23212706	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192516.5"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-202"; exon_number 4; exon_id "ENSMUSE00001343810.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127446.1";
mm10-chrY	HAVANA	transcript	23212641	23215003	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192169.5"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127447.1";
mm10-chrY	HAVANA	exon	23214818	23215003	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192169.5"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-201"; exon_number 1; exon_id "ENSMUSE00001341076.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127447.1";
mm10-chrY	HAVANA	exon	23214147	23214328	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192169.5"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-201"; exon_number 2; exon_id "ENSMUSE00001344769.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127447.1";
mm10-chrY	HAVANA	exon	23212641	23212706	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192169.5"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-201"; exon_number 3; exon_id "ENSMUSE00001337324.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127447.1";
mm10-chrY	HAVANA	transcript	23212641	23215003	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192583.1"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127448.1";
mm10-chrY	HAVANA	exon	23214818	23215003	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192583.1"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-203"; exon_number 1; exon_id "ENSMUSE00001341076.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127448.1";
mm10-chrY	HAVANA	exon	23214147	23214328	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192583.1"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-203"; exon_number 2; exon_id "ENSMUSE00001344769.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127448.1";
mm10-chrY	HAVANA	exon	23213234	23213417	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192583.1"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-203"; exon_number 3; exon_id "ENSMUSE00001345344.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127448.1";
mm10-chrY	HAVANA	exon	23212641	23212706	.	-	.	gene_id "ENSMUSG00000104062.5"; transcript_id "ENSMUST00000192583.1"; gene_type "lincRNA"; gene_name "Gm37952"; transcript_type "lincRNA"; transcript_name "Gm37952-203"; exon_number 4; exon_id "ENSMUSE00001337324.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050120.1"; havana_transcript "OTTMUST00000127448.1";
mm10-chrY	HAVANA	gene	23240258	23240953	.	+	.	gene_id "ENSMUSG00000103231.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21907"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050121.1";
mm10-chrY	HAVANA	transcript	23240258	23240953	.	+	.	gene_id "ENSMUSG00000103231.1"; transcript_id "ENSMUST00000192989.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21907"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21907-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050121.1"; havana_transcript "OTTMUST00000127449.1";
mm10-chrY	HAVANA	exon	23240258	23240953	.	+	.	gene_id "ENSMUSG00000103231.1"; transcript_id "ENSMUST00000192989.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21907"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21907-201"; exon_number 1; exon_id "ENSMUSE00001336255.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050121.1"; havana_transcript "OTTMUST00000127449.1";
mm10-chrY	HAVANA	gene	23277187	23277801	.	+	.	gene_id "ENSMUSG00000102318.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37627"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050122.1";
mm10-chrY	HAVANA	transcript	23277187	23277801	.	+	.	gene_id "ENSMUSG00000102318.1"; transcript_id "ENSMUST00000194585.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37627"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37627-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050122.1"; havana_transcript "OTTMUST00000127450.1";
mm10-chrY	HAVANA	exon	23277187	23277801	.	+	.	gene_id "ENSMUSG00000102318.1"; transcript_id "ENSMUST00000194585.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37627"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37627-201"; exon_number 1; exon_id "ENSMUSE00001341914.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050122.1"; havana_transcript "OTTMUST00000127450.1";
mm10-chrY	HAVANA	gene	23306767	23307462	.	+	.	gene_id "ENSMUSG00000103074.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20925"; level 2; havana_gene "OTTMUSG00000050123.1";
mm10-chrY	HAVANA	transcript	23306767	23307462	.	+	.	gene_id "ENSMUSG00000103074.1"; transcript_id "ENSMUST00000193967.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20925"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20925-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050123.1"; havana_transcript "OTTMUST00000127451.1";
mm10-chrY	HAVANA	exon	23306767	23307462	.	+	.	gene_id "ENSMUSG00000103074.1"; transcript_id "ENSMUST00000193967.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20925"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20925-201"; exon_number 1; exon_id "ENSMUSE00001341888.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050123.1"; havana_transcript "OTTMUST00000127451.1";
mm10-chrY	HAVANA	gene	23381504	23382199	.	+	.	gene_id "ENSMUSG00000102965.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20926"; level 2; havana_gene "OTTMUSG00000050124.1";
mm10-chrY	HAVANA	transcript	23381504	23382199	.	+	.	gene_id "ENSMUSG00000102965.1"; transcript_id "ENSMUST00000194457.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20926"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20926-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050124.1"; havana_transcript "OTTMUST00000127452.1";
mm10-chrY	HAVANA	exon	23381504	23382199	.	+	.	gene_id "ENSMUSG00000102965.1"; transcript_id "ENSMUST00000194457.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20926"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20926-201"; exon_number 1; exon_id "ENSMUSE00001336977.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050124.1"; havana_transcript "OTTMUST00000127452.1";
mm10-chrY	HAVANA	gene	23539194	23542427	.	-	.	gene_id "ENSMUSG00000104289.5"; gene_type "lincRNA"; gene_name "Gm37454"; level 2; havana_gene "OTTMUSG00000050046.1";
mm10-chrY	HAVANA	transcript	23539194	23542427	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000193918.5"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127312.1";
mm10-chrY	HAVANA	exon	23541789	23542427	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000193918.5"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-202"; exon_number 1; exon_id "ENSMUSE00001339668.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127312.1";
mm10-chrY	HAVANA	exon	23541125	23541310	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000193918.5"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-202"; exon_number 2; exon_id "ENSMUSE00001336327.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127312.1";
mm10-chrY	HAVANA	exon	23540209	23540392	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000193918.5"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-202"; exon_number 3; exon_id "ENSMUSE00001339023.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127312.1";
mm10-chrY	HAVANA	exon	23539194	23539682	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000193918.5"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-202"; exon_number 4; exon_id "ENSMUSE00001344033.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127312.1";
mm10-chrY	HAVANA	transcript	23539614	23541974	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000192136.5"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127313.1";
mm10-chrY	HAVANA	exon	23541789	23541974	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000192136.5"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-201"; exon_number 1; exon_id "ENSMUSE00001338756.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127313.1";
mm10-chrY	HAVANA	exon	23541125	23541306	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000192136.5"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-201"; exon_number 2; exon_id "ENSMUSE00001337357.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127313.1";
mm10-chrY	HAVANA	exon	23540209	23540392	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000192136.5"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-201"; exon_number 3; exon_id "ENSMUSE00001339023.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127313.1";
mm10-chrY	HAVANA	exon	23539614	23539682	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000192136.5"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-201"; exon_number 4; exon_id "ENSMUSE00001340845.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127313.1";
mm10-chrY	HAVANA	transcript	23539614	23541974	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000195154.1"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127314.1";
mm10-chrY	HAVANA	exon	23541789	23541974	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000195154.1"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-203"; exon_number 1; exon_id "ENSMUSE00001338756.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127314.1";
mm10-chrY	HAVANA	exon	23541125	23541306	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000195154.1"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-203"; exon_number 2; exon_id "ENSMUSE00001337357.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127314.1";
mm10-chrY	HAVANA	exon	23539614	23539682	.	-	.	gene_id "ENSMUSG00000104289.5"; transcript_id "ENSMUST00000195154.1"; gene_type "lincRNA"; gene_name "Gm37454"; transcript_type "lincRNA"; transcript_name "Gm37454-203"; exon_number 3; exon_id "ENSMUSE00001340845.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050046.1"; havana_transcript "OTTMUST00000127314.1";
mm10-chrY	HAVANA	gene	23611872	23612567	.	+	.	gene_id "ENSMUSG00000102730.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38138"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050047.1";
mm10-chrY	HAVANA	transcript	23611872	23612567	.	+	.	gene_id "ENSMUSG00000102730.1"; transcript_id "ENSMUST00000193274.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38138"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38138-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050047.1"; havana_transcript "OTTMUST00000127315.1";
mm10-chrY	HAVANA	exon	23611872	23612567	.	+	.	gene_id "ENSMUSG00000102730.1"; transcript_id "ENSMUST00000193274.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38138"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38138-201"; exon_number 1; exon_id "ENSMUSE00001342242.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050047.1"; havana_transcript "OTTMUST00000127315.1";
mm10-chrY	HAVANA	gene	23672821	23697377	.	-	.	gene_id "ENSMUSG00000102529.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29740"; level 2; havana_gene "OTTMUSG00000050048.1";
mm10-chrY	HAVANA	transcript	23672821	23697377	.	-	.	gene_id "ENSMUSG00000102529.1"; transcript_id "ENSMUST00000193182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29740-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050048.1"; havana_transcript "OTTMUST00000127316.1";
mm10-chrY	HAVANA	exon	23697269	23697377	.	-	.	gene_id "ENSMUSG00000102529.1"; transcript_id "ENSMUST00000193182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29740-201"; exon_number 1; exon_id "ENSMUSE00001345107.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050048.1"; havana_transcript "OTTMUST00000127316.1";
mm10-chrY	HAVANA	exon	23691866	23691932	.	-	.	gene_id "ENSMUSG00000102529.1"; transcript_id "ENSMUST00000193182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29740-201"; exon_number 2; exon_id "ENSMUSE00001340231.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050048.1"; havana_transcript "OTTMUST00000127316.1";
mm10-chrY	HAVANA	exon	23691210	23691244	.	-	.	gene_id "ENSMUSG00000102529.1"; transcript_id "ENSMUST00000193182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29740-201"; exon_number 3; exon_id "ENSMUSE00001336601.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050048.1"; havana_transcript "OTTMUST00000127316.1";
mm10-chrY	HAVANA	exon	23684112	23684178	.	-	.	gene_id "ENSMUSG00000102529.1"; transcript_id "ENSMUST00000193182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29740-201"; exon_number 4; exon_id "ENSMUSE00001343085.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050048.1"; havana_transcript "OTTMUST00000127316.1";
mm10-chrY	HAVANA	exon	23683488	23683522	.	-	.	gene_id "ENSMUSG00000102529.1"; transcript_id "ENSMUST00000193182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29740-201"; exon_number 5; exon_id "ENSMUSE00001336721.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050048.1"; havana_transcript "OTTMUST00000127316.1";
mm10-chrY	HAVANA	exon	23676215	23676332	.	-	.	gene_id "ENSMUSG00000102529.1"; transcript_id "ENSMUST00000193182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29740-201"; exon_number 6; exon_id "ENSMUSE00001343308.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050048.1"; havana_transcript "OTTMUST00000127316.1";
mm10-chrY	HAVANA	exon	23675342	23675442	.	-	.	gene_id "ENSMUSG00000102529.1"; transcript_id "ENSMUST00000193182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29740-201"; exon_number 7; exon_id "ENSMUSE00001345962.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050048.1"; havana_transcript "OTTMUST00000127316.1";
mm10-chrY	HAVANA	exon	23673204	23673302	.	-	.	gene_id "ENSMUSG00000102529.1"; transcript_id "ENSMUST00000193182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29740-201"; exon_number 8; exon_id "ENSMUSE00001337922.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050048.1"; havana_transcript "OTTMUST00000127316.1";
mm10-chrY	HAVANA	exon	23672821	23672844	.	-	.	gene_id "ENSMUSG00000102529.1"; transcript_id "ENSMUST00000193182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29740-201"; exon_number 9; exon_id "ENSMUSE00001340007.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050048.1"; havana_transcript "OTTMUST00000127316.1";
mm10-chrY	HAVANA	gene	23757634	23760872	.	-	.	gene_id "ENSMUSG00000103589.5"; gene_type "lincRNA"; gene_name "Gm37840"; level 2; havana_gene "OTTMUSG00000050049.1";
mm10-chrY	HAVANA	transcript	23757634	23760872	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000194805.5"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127317.1";
mm10-chrY	HAVANA	exon	23760233	23760872	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000194805.5"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-202"; exon_number 1; exon_id "ENSMUSE00001337223.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127317.1";
mm10-chrY	HAVANA	exon	23759562	23759747	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000194805.5"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-202"; exon_number 2; exon_id "ENSMUSE00001344110.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127317.1";
mm10-chrY	HAVANA	exon	23758650	23758832	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000194805.5"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-202"; exon_number 3; exon_id "ENSMUSE00001345478.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127317.1";
mm10-chrY	HAVANA	exon	23757634	23758122	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000194805.5"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-202"; exon_number 4; exon_id "ENSMUSE00001336789.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127317.1";
mm10-chrY	HAVANA	transcript	23758054	23760419	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000195139.5"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127318.1";
mm10-chrY	HAVANA	exon	23760233	23760419	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000195139.5"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-203"; exon_number 1; exon_id "ENSMUSE00001340936.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127318.1";
mm10-chrY	HAVANA	exon	23759562	23759743	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000195139.5"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-203"; exon_number 2; exon_id "ENSMUSE00001344678.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127318.1";
mm10-chrY	HAVANA	exon	23758650	23758832	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000195139.5"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-203"; exon_number 3; exon_id "ENSMUSE00001345478.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127318.1";
mm10-chrY	HAVANA	exon	23758054	23758122	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000195139.5"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-203"; exon_number 4; exon_id "ENSMUSE00001343888.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127318.1";
mm10-chrY	HAVANA	transcript	23758054	23760419	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000192694.1"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127319.1";
mm10-chrY	HAVANA	exon	23760233	23760419	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000192694.1"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-201"; exon_number 1; exon_id "ENSMUSE00001340936.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127319.1";
mm10-chrY	HAVANA	exon	23759562	23759743	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000192694.1"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-201"; exon_number 2; exon_id "ENSMUSE00001344678.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127319.1";
mm10-chrY	HAVANA	exon	23758054	23758122	.	-	.	gene_id "ENSMUSG00000103589.5"; transcript_id "ENSMUST00000192694.1"; gene_type "lincRNA"; gene_name "Gm37840"; transcript_type "lincRNA"; transcript_name "Gm37840-201"; exon_number 3; exon_id "ENSMUSE00001343888.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050049.1"; havana_transcript "OTTMUST00000127319.1";
mm10-chrY	HAVANA	gene	23792729	23796073	.	+	.	gene_id "ENSMUSG00000102396.1"; gene_type "lincRNA"; gene_name "Gm37574"; level 2; havana_gene "OTTMUSG00000050050.1";
mm10-chrY	HAVANA	transcript	23792729	23796073	.	+	.	gene_id "ENSMUSG00000102396.1"; transcript_id "ENSMUST00000194264.1"; gene_type "lincRNA"; gene_name "Gm37574"; transcript_type "lincRNA"; transcript_name "Gm37574-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050050.1"; havana_transcript "OTTMUST00000127320.1";
mm10-chrY	HAVANA	exon	23792729	23792951	.	+	.	gene_id "ENSMUSG00000102396.1"; transcript_id "ENSMUST00000194264.1"; gene_type "lincRNA"; gene_name "Gm37574"; transcript_type "lincRNA"; transcript_name "Gm37574-201"; exon_number 1; exon_id "ENSMUSE00001337572.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050050.1"; havana_transcript "OTTMUST00000127320.1";
mm10-chrY	HAVANA	exon	23794131	23796073	.	+	.	gene_id "ENSMUSG00000102396.1"; transcript_id "ENSMUST00000194264.1"; gene_type "lincRNA"; gene_name "Gm37574"; transcript_type "lincRNA"; transcript_name "Gm37574-201"; exon_number 2; exon_id "ENSMUSE00001343248.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050050.1"; havana_transcript "OTTMUST00000127320.1";
mm10-chrY	HAVANA	gene	23802167	23802862	.	+	.	gene_id "ENSMUSG00000104247.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21768"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050051.1";
mm10-chrY	HAVANA	transcript	23802167	23802862	.	+	.	gene_id "ENSMUSG00000104247.1"; transcript_id "ENSMUST00000194103.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21768"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21768-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050051.1"; havana_transcript "OTTMUST00000127321.1";
mm10-chrY	HAVANA	exon	23802167	23802862	.	+	.	gene_id "ENSMUSG00000104247.1"; transcript_id "ENSMUST00000194103.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21768"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21768-201"; exon_number 1; exon_id "ENSMUSE00001346300.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050051.1"; havana_transcript "OTTMUST00000127321.1";
mm10-chrY	HAVANA	gene	23839025	23839639	.	+	.	gene_id "ENSMUSG00000104255.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37172"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050052.1";
mm10-chrY	HAVANA	transcript	23839025	23839639	.	+	.	gene_id "ENSMUSG00000104255.1"; transcript_id "ENSMUST00000191926.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37172"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37172-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050052.1"; havana_transcript "OTTMUST00000127322.1";
mm10-chrY	HAVANA	exon	23839025	23839639	.	+	.	gene_id "ENSMUSG00000104255.1"; transcript_id "ENSMUST00000191926.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37172"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37172-201"; exon_number 1; exon_id "ENSMUSE00001342565.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050052.1"; havana_transcript "OTTMUST00000127322.1";
mm10-chrY	HAVANA	gene	23850730	23852312	.	-	.	gene_id "ENSMUSG00000102598.1"; gene_type "lincRNA"; gene_name "Gm35670"; level 2; havana_gene "OTTMUSG00000050053.1";
mm10-chrY	HAVANA	transcript	23850730	23852312	.	-	.	gene_id "ENSMUSG00000102598.1"; transcript_id "ENSMUST00000192493.1"; gene_type "lincRNA"; gene_name "Gm35670"; transcript_type "lincRNA"; transcript_name "Gm35670-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050053.1"; havana_transcript "OTTMUST00000127323.1";
mm10-chrY	HAVANA	exon	23852077	23852312	.	-	.	gene_id "ENSMUSG00000102598.1"; transcript_id "ENSMUST00000192493.1"; gene_type "lincRNA"; gene_name "Gm35670"; transcript_type "lincRNA"; transcript_name "Gm35670-201"; exon_number 1; exon_id "ENSMUSE00001340209.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050053.1"; havana_transcript "OTTMUST00000127323.1";
mm10-chrY	HAVANA	exon	23850730	23850890	.	-	.	gene_id "ENSMUSG00000102598.1"; transcript_id "ENSMUST00000192493.1"; gene_type "lincRNA"; gene_name "Gm35670"; transcript_type "lincRNA"; transcript_name "Gm35670-201"; exon_number 2; exon_id "ENSMUSE00001342653.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050053.1"; havana_transcript "OTTMUST00000127323.1";
mm10-chrY	HAVANA	gene	23868563	23869258	.	+	.	gene_id "ENSMUSG00000102402.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20840"; level 2; havana_gene "OTTMUSG00000050054.1";
mm10-chrY	HAVANA	transcript	23868563	23869258	.	+	.	gene_id "ENSMUSG00000102402.1"; transcript_id "ENSMUST00000192165.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20840"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20840-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050054.1"; havana_transcript "OTTMUST00000127324.1";
mm10-chrY	HAVANA	exon	23868563	23869258	.	+	.	gene_id "ENSMUSG00000102402.1"; transcript_id "ENSMUST00000192165.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20840"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20840-201"; exon_number 1; exon_id "ENSMUSE00001344335.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050054.1"; havana_transcript "OTTMUST00000127324.1";
mm10-chrY	HAVANA	gene	23943343	23944038	.	+	.	gene_id "ENSMUSG00000104228.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35955"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050055.1";
mm10-chrY	HAVANA	transcript	23943343	23944038	.	+	.	gene_id "ENSMUSG00000104228.1"; transcript_id "ENSMUST00000193437.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35955"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35955-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050055.1"; havana_transcript "OTTMUST00000127325.1";
mm10-chrY	HAVANA	exon	23943343	23944038	.	+	.	gene_id "ENSMUSG00000104228.1"; transcript_id "ENSMUST00000193437.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm35955"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm35955-201"; exon_number 1; exon_id "ENSMUSE00001344689.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050055.1"; havana_transcript "OTTMUST00000127325.1";
mm10-chrY	HAVANA	gene	24051128	24054365	.	-	.	gene_id "ENSMUSG00000103029.5"; gene_type "lincRNA"; gene_name "Gm37687"; level 2; havana_gene "OTTMUSG00000050056.1";
mm10-chrY	HAVANA	transcript	24051128	24054365	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000195020.5"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127326.1";
mm10-chrY	HAVANA	exon	24053727	24054365	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000195020.5"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-203"; exon_number 1; exon_id "ENSMUSE00001342639.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127326.1";
mm10-chrY	HAVANA	exon	24053056	24053241	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000195020.5"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-203"; exon_number 2; exon_id "ENSMUSE00001345594.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127326.1";
mm10-chrY	HAVANA	exon	24052143	24052326	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000195020.5"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-203"; exon_number 3; exon_id "ENSMUSE00001336905.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127326.1";
mm10-chrY	HAVANA	exon	24051128	24051616	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000195020.5"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-203"; exon_number 4; exon_id "ENSMUSE00001336464.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127326.1";
mm10-chrY	HAVANA	transcript	24051548	24053912	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000193296.5"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127327.1";
mm10-chrY	HAVANA	exon	24053727	24053912	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000193296.5"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-202"; exon_number 1; exon_id "ENSMUSE00001337250.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127327.1";
mm10-chrY	HAVANA	exon	24053056	24053237	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000193296.5"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-202"; exon_number 2; exon_id "ENSMUSE00001340392.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127327.1";
mm10-chrY	HAVANA	exon	24052143	24052326	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000193296.5"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-202"; exon_number 3; exon_id "ENSMUSE00001336905.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127327.1";
mm10-chrY	HAVANA	exon	24051548	24051616	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000193296.5"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-202"; exon_number 4; exon_id "ENSMUSE00001338325.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127327.1";
mm10-chrY	HAVANA	transcript	24051548	24053912	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000192525.1"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127328.1";
mm10-chrY	HAVANA	exon	24053727	24053912	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000192525.1"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-201"; exon_number 1; exon_id "ENSMUSE00001337250.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127328.1";
mm10-chrY	HAVANA	exon	24053056	24053237	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000192525.1"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-201"; exon_number 2; exon_id "ENSMUSE00001340392.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127328.1";
mm10-chrY	HAVANA	exon	24051548	24051616	.	-	.	gene_id "ENSMUSG00000103029.5"; transcript_id "ENSMUST00000192525.1"; gene_type "lincRNA"; gene_name "Gm37687"; transcript_type "lincRNA"; transcript_name "Gm37687-201"; exon_number 3; exon_id "ENSMUSE00001338325.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050056.1"; havana_transcript "OTTMUST00000127328.1";
mm10-chrY	HAVANA	gene	24086389	24089731	.	+	.	gene_id "ENSMUSG00000102239.1"; gene_type "lincRNA"; gene_name "Gm38296"; level 2; havana_gene "OTTMUSG00000050057.1";
mm10-chrY	HAVANA	transcript	24086389	24089731	.	+	.	gene_id "ENSMUSG00000102239.1"; transcript_id "ENSMUST00000195205.1"; gene_type "lincRNA"; gene_name "Gm38296"; transcript_type "lincRNA"; transcript_name "Gm38296-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050057.1"; havana_transcript "OTTMUST00000127329.1";
mm10-chrY	HAVANA	exon	24086389	24086611	.	+	.	gene_id "ENSMUSG00000102239.1"; transcript_id "ENSMUST00000195205.1"; gene_type "lincRNA"; gene_name "Gm38296"; transcript_type "lincRNA"; transcript_name "Gm38296-201"; exon_number 1; exon_id "ENSMUSE00001344054.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050057.1"; havana_transcript "OTTMUST00000127329.1";
mm10-chrY	HAVANA	exon	24087788	24089731	.	+	.	gene_id "ENSMUSG00000102239.1"; transcript_id "ENSMUST00000195205.1"; gene_type "lincRNA"; gene_name "Gm38296"; transcript_type "lincRNA"; transcript_name "Gm38296-201"; exon_number 2; exon_id "ENSMUSE00001336832.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050057.1"; havana_transcript "OTTMUST00000127329.1";
mm10-chrY	HAVANA	gene	24091137	24091451	.	+	.	gene_id "ENSMUSG00000103153.1"; gene_type "processed_pseudogene"; gene_name "Gm38290"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050058.1";
mm10-chrY	HAVANA	transcript	24091137	24091451	.	+	.	gene_id "ENSMUSG00000103153.1"; transcript_id "ENSMUST00000195238.1"; gene_type "processed_pseudogene"; gene_name "Gm38290"; transcript_type "processed_pseudogene"; transcript_name "Gm38290-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050058.1"; havana_transcript "OTTMUST00000127330.1";
mm10-chrY	HAVANA	exon	24091137	24091451	.	+	.	gene_id "ENSMUSG00000103153.1"; transcript_id "ENSMUST00000195238.1"; gene_type "processed_pseudogene"; gene_name "Gm38290"; transcript_type "processed_pseudogene"; transcript_name "Gm38290-201"; exon_number 1; exon_id "ENSMUSE00001344969.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050058.1"; havana_transcript "OTTMUST00000127330.1";
mm10-chrY	HAVANA	gene	24127690	24128385	.	+	.	gene_id "ENSMUSG00000103086.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38121"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050059.1";
mm10-chrY	HAVANA	transcript	24127690	24128385	.	+	.	gene_id "ENSMUSG00000103086.1"; transcript_id "ENSMUST00000193213.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38121"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38121-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050059.1"; havana_transcript "OTTMUST00000127331.1";
mm10-chrY	HAVANA	exon	24127690	24128385	.	+	.	gene_id "ENSMUSG00000103086.1"; transcript_id "ENSMUST00000193213.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38121"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38121-201"; exon_number 1; exon_id "ENSMUSE00001342028.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050059.1"; havana_transcript "OTTMUST00000127331.1";
mm10-chrY	HAVANA	gene	24188717	24213221	.	-	.	gene_id "ENSMUSG00000103327.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36047"; level 2; havana_gene "OTTMUSG00000050060.1";
mm10-chrY	HAVANA	transcript	24188717	24213221	.	-	.	gene_id "ENSMUSG00000103327.1"; transcript_id "ENSMUST00000193659.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36047-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050060.1"; havana_transcript "OTTMUST00000127332.1";
mm10-chrY	HAVANA	exon	24213113	24213221	.	-	.	gene_id "ENSMUSG00000103327.1"; transcript_id "ENSMUST00000193659.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36047-201"; exon_number 1; exon_id "ENSMUSE00001341556.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050060.1"; havana_transcript "OTTMUST00000127332.1";
mm10-chrY	HAVANA	exon	24207716	24207782	.	-	.	gene_id "ENSMUSG00000103327.1"; transcript_id "ENSMUST00000193659.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36047-201"; exon_number 2; exon_id "ENSMUSE00001338920.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050060.1"; havana_transcript "OTTMUST00000127332.1";
mm10-chrY	HAVANA	exon	24207062	24207096	.	-	.	gene_id "ENSMUSG00000103327.1"; transcript_id "ENSMUST00000193659.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36047-201"; exon_number 3; exon_id "ENSMUSE00001336834.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050060.1"; havana_transcript "OTTMUST00000127332.1";
mm10-chrY	HAVANA	exon	24200002	24200068	.	-	.	gene_id "ENSMUSG00000103327.1"; transcript_id "ENSMUST00000193659.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36047-201"; exon_number 4; exon_id "ENSMUSE00001346305.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050060.1"; havana_transcript "OTTMUST00000127332.1";
mm10-chrY	HAVANA	exon	24199392	24199426	.	-	.	gene_id "ENSMUSG00000103327.1"; transcript_id "ENSMUST00000193659.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36047-201"; exon_number 5; exon_id "ENSMUSE00001345867.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050060.1"; havana_transcript "OTTMUST00000127332.1";
mm10-chrY	HAVANA	exon	24192130	24192247	.	-	.	gene_id "ENSMUSG00000103327.1"; transcript_id "ENSMUST00000193659.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36047-201"; exon_number 6; exon_id "ENSMUSE00001338682.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050060.1"; havana_transcript "OTTMUST00000127332.1";
mm10-chrY	HAVANA	exon	24191244	24191343	.	-	.	gene_id "ENSMUSG00000103327.1"; transcript_id "ENSMUST00000193659.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36047-201"; exon_number 7; exon_id "ENSMUSE00001342305.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050060.1"; havana_transcript "OTTMUST00000127332.1";
mm10-chrY	HAVANA	exon	24189103	24189201	.	-	.	gene_id "ENSMUSG00000103327.1"; transcript_id "ENSMUST00000193659.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36047-201"; exon_number 8; exon_id "ENSMUSE00001339860.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050060.1"; havana_transcript "OTTMUST00000127332.1";
mm10-chrY	HAVANA	exon	24188717	24188743	.	-	.	gene_id "ENSMUSG00000103327.1"; transcript_id "ENSMUST00000193659.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36047"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36047-201"; exon_number 9; exon_id "ENSMUSE00001339370.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050060.1"; havana_transcript "OTTMUST00000127332.1";
mm10-chrY	HAVANA	gene	24273508	24276742	.	-	.	gene_id "ENSMUSG00000104500.5"; gene_type "lincRNA"; gene_name "Gm36345"; level 2; havana_gene "OTTMUSG00000050061.1";
mm10-chrY	HAVANA	transcript	24273508	24276742	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000194949.5"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127333.1";
mm10-chrY	HAVANA	exon	24276107	24276742	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000194949.5"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-202"; exon_number 1; exon_id "ENSMUSE00001342913.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127333.1";
mm10-chrY	HAVANA	exon	24275436	24275621	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000194949.5"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-202"; exon_number 2; exon_id "ENSMUSE00001339818.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127333.1";
mm10-chrY	HAVANA	exon	24274523	24274706	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000194949.5"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-202"; exon_number 3; exon_id "ENSMUSE00001343791.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127333.1";
mm10-chrY	HAVANA	exon	24273508	24273996	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000194949.5"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-202"; exon_number 4; exon_id "ENSMUSE00001341409.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127333.1";
mm10-chrY	HAVANA	transcript	24273928	24276290	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000194662.5"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127334.1";
mm10-chrY	HAVANA	exon	24276107	24276290	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000194662.5"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-201"; exon_number 1; exon_id "ENSMUSE00001341465.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127334.1";
mm10-chrY	HAVANA	exon	24275436	24275617	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000194662.5"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-201"; exon_number 2; exon_id "ENSMUSE00001343678.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127334.1";
mm10-chrY	HAVANA	exon	24274523	24274706	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000194662.5"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-201"; exon_number 3; exon_id "ENSMUSE00001343791.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127334.1";
mm10-chrY	HAVANA	exon	24273928	24273996	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000194662.5"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-201"; exon_number 4; exon_id "ENSMUSE00001336911.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127334.1";
mm10-chrY	HAVANA	transcript	24273928	24276290	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000195661.1"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127335.1";
mm10-chrY	HAVANA	exon	24276107	24276290	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000195661.1"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-203"; exon_number 1; exon_id "ENSMUSE00001341465.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127335.1";
mm10-chrY	HAVANA	exon	24275436	24275617	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000195661.1"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-203"; exon_number 2; exon_id "ENSMUSE00001343678.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127335.1";
mm10-chrY	HAVANA	exon	24273928	24273996	.	-	.	gene_id "ENSMUSG00000104500.5"; transcript_id "ENSMUST00000195661.1"; gene_type "lincRNA"; gene_name "Gm36345"; transcript_type "lincRNA"; transcript_name "Gm36345-203"; exon_number 3; exon_id "ENSMUSE00001336911.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050061.1"; havana_transcript "OTTMUST00000127335.1";
mm10-chrY	HAVANA	gene	24306236	24309585	.	+	.	gene_id "ENSMUSG00000103236.1"; gene_type "lincRNA"; gene_name "Gm37157"; level 2; havana_gene "OTTMUSG00000050062.1";
mm10-chrY	HAVANA	transcript	24306236	24309585	.	+	.	gene_id "ENSMUSG00000103236.1"; transcript_id "ENSMUST00000192120.1"; gene_type "lincRNA"; gene_name "Gm37157"; transcript_type "lincRNA"; transcript_name "Gm37157-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050062.1"; havana_transcript "OTTMUST00000127336.1";
mm10-chrY	HAVANA	exon	24306236	24306458	.	+	.	gene_id "ENSMUSG00000103236.1"; transcript_id "ENSMUST00000192120.1"; gene_type "lincRNA"; gene_name "Gm37157"; transcript_type "lincRNA"; transcript_name "Gm37157-201"; exon_number 1; exon_id "ENSMUSE00001337276.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050062.1"; havana_transcript "OTTMUST00000127336.1";
mm10-chrY	HAVANA	exon	24307641	24309585	.	+	.	gene_id "ENSMUSG00000103236.1"; transcript_id "ENSMUST00000192120.1"; gene_type "lincRNA"; gene_name "Gm37157"; transcript_type "lincRNA"; transcript_name "Gm37157-201"; exon_number 2; exon_id "ENSMUSE00001341138.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050062.1"; havana_transcript "OTTMUST00000127336.1";
mm10-chrY	HAVANA	gene	24315448	24316142	.	+	.	gene_id "ENSMUSG00000102911.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38017"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050063.1";
mm10-chrY	HAVANA	transcript	24315448	24316142	.	+	.	gene_id "ENSMUSG00000102911.1"; transcript_id "ENSMUST00000194768.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38017"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38017-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050063.1"; havana_transcript "OTTMUST00000127337.1";
mm10-chrY	HAVANA	exon	24315448	24316142	.	+	.	gene_id "ENSMUSG00000102911.1"; transcript_id "ENSMUST00000194768.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38017"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38017-201"; exon_number 1; exon_id "ENSMUSE00001339883.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050063.1"; havana_transcript "OTTMUST00000127337.1";
mm10-chrY	HAVANA	gene	24352303	24352917	.	+	.	gene_id "ENSMUSG00000103008.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36468"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050064.1";
mm10-chrY	HAVANA	transcript	24352303	24352917	.	+	.	gene_id "ENSMUSG00000103008.1"; transcript_id "ENSMUST00000192119.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36468"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36468-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050064.1"; havana_transcript "OTTMUST00000127338.1";
mm10-chrY	HAVANA	exon	24352303	24352917	.	+	.	gene_id "ENSMUSG00000103008.1"; transcript_id "ENSMUST00000192119.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36468"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36468-201"; exon_number 1; exon_id "ENSMUSE00001339829.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050064.1"; havana_transcript "OTTMUST00000127338.1";
mm10-chrY	HAVANA	gene	24381817	24382512	.	+	.	gene_id "ENSMUSG00000103058.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21845"; level 2; havana_gene "OTTMUSG00000050065.1";
mm10-chrY	HAVANA	transcript	24381817	24382512	.	+	.	gene_id "ENSMUSG00000103058.1"; transcript_id "ENSMUST00000191848.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21845"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21845-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050065.1"; havana_transcript "OTTMUST00000127339.1";
mm10-chrY	HAVANA	exon	24381817	24382512	.	+	.	gene_id "ENSMUSG00000103058.1"; transcript_id "ENSMUST00000191848.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21845"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21845-201"; exon_number 1; exon_id "ENSMUSE00001344559.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050065.1"; havana_transcript "OTTMUST00000127339.1";
mm10-chrY	HAVANA	gene	24455057	24457399	.	+	.	gene_id "ENSMUSG00000093868.2"; gene_type "protein_coding"; gene_name "Gm20809"; level 2; tag "retrogene"; havana_gene "OTTMUSG00000049727.1";
mm10-chrY	HAVANA	transcript	24455057	24457399	.	+	.	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000187943.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-202"; level 2; protein_id "ENSMUSP00000140802.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1"; havana_transcript "OTTMUST00000126677.1";
mm10-chrY	HAVANA	exon	24455057	24455180	.	+	.	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000187943.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-202"; exon_number 1; exon_id "ENSMUSE00001325100.1"; level 2; protein_id "ENSMUSP00000140802.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1"; havana_transcript "OTTMUST00000126677.1";
mm10-chrY	HAVANA	exon	24456300	24457399	.	+	.	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000187943.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-202"; exon_number 2; exon_id "ENSMUSE00001328852.1"; level 2; protein_id "ENSMUSP00000140802.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1"; havana_transcript "OTTMUST00000126677.1";
mm10-chrY	HAVANA	CDS	24456582	24457262	.	+	0	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000187943.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-202"; exon_number 2; exon_id "ENSMUSE00001328852.1"; level 2; protein_id "ENSMUSP00000140802.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1"; havana_transcript "OTTMUST00000126677.1";
mm10-chrY	HAVANA	start_codon	24456582	24456584	.	+	0	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000187943.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-202"; exon_number 2; exon_id "ENSMUSE00001328852.1"; level 2; protein_id "ENSMUSP00000140802.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1"; havana_transcript "OTTMUST00000126677.1";
mm10-chrY	HAVANA	stop_codon	24457263	24457265	.	+	0	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000187943.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-202"; exon_number 2; exon_id "ENSMUSE00001328852.1"; level 2; protein_id "ENSMUSP00000140802.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1"; havana_transcript "OTTMUST00000126677.1";
mm10-chrY	HAVANA	UTR	24455057	24455180	.	+	.	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000187943.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-202"; exon_number 1; exon_id "ENSMUSE00001325100.1"; level 2; protein_id "ENSMUSP00000140802.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1"; havana_transcript "OTTMUST00000126677.1";
mm10-chrY	HAVANA	UTR	24456300	24456581	.	+	.	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000187943.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-202"; exon_number 2; exon_id "ENSMUSE00001328852.1"; level 2; protein_id "ENSMUSP00000140802.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1"; havana_transcript "OTTMUST00000126677.1";
mm10-chrY	HAVANA	UTR	24457263	24457399	.	+	.	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000187943.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-202"; exon_number 2; exon_id "ENSMUSE00001328852.1"; level 2; protein_id "ENSMUSP00000140802.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1"; havana_transcript "OTTMUST00000126677.1";
mm10-chrY	ENSEMBL	transcript	24456582	24457265	.	+	.	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000179663.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-201"; level 3; protein_id "ENSMUSP00000137177.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1";
mm10-chrY	ENSEMBL	exon	24456582	24457265	.	+	.	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000179663.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-201"; exon_number 1; exon_id "ENSMUSE00000973297.1"; level 3; protein_id "ENSMUSP00000137177.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1";
mm10-chrY	ENSEMBL	CDS	24456582	24457262	.	+	0	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000179663.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-201"; exon_number 1; exon_id "ENSMUSE00000973297.1"; level 3; protein_id "ENSMUSP00000137177.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1";
mm10-chrY	ENSEMBL	start_codon	24456582	24456584	.	+	0	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000179663.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-201"; exon_number 1; exon_id "ENSMUSE00000973297.1"; level 3; protein_id "ENSMUSP00000137177.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1";
mm10-chrY	ENSEMBL	stop_codon	24457263	24457265	.	+	0	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000179663.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-201"; exon_number 1; exon_id "ENSMUSE00000973297.1"; level 3; protein_id "ENSMUSP00000137177.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1";
mm10-chrY	ENSEMBL	UTR	24457263	24457265	.	+	.	gene_id "ENSMUSG00000093868.2"; transcript_id "ENSMUST00000179663.1"; gene_type "protein_coding"; gene_name "Gm20809"; transcript_type "protein_coding"; transcript_name "Gm20809-201"; exon_number 1; exon_id "ENSMUSE00000973297.1"; level 3; protein_id "ENSMUSP00000137177.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85871.1"; havana_gene "OTTMUSG00000049727.1";
mm10-chrY	HAVANA	gene	24564331	24567568	.	-	.	gene_id "ENSMUSG00000102350.5"; gene_type "lincRNA"; gene_name "Gm37434"; level 2; havana_gene "OTTMUSG00000050066.1";
mm10-chrY	HAVANA	transcript	24564331	24567568	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000194239.5"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127340.1";
mm10-chrY	HAVANA	exon	24566930	24567568	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000194239.5"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-203"; exon_number 1; exon_id "ENSMUSE00001341805.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127340.1";
mm10-chrY	HAVANA	exon	24566259	24566444	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000194239.5"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-203"; exon_number 2; exon_id "ENSMUSE00001344705.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127340.1";
mm10-chrY	HAVANA	exon	24565346	24565529	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000194239.5"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-203"; exon_number 3; exon_id "ENSMUSE00001337317.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127340.1";
mm10-chrY	HAVANA	exon	24564331	24564819	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000194239.5"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-203"; exon_number 4; exon_id "ENSMUSE00001339029.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127340.1";
mm10-chrY	HAVANA	transcript	24564751	24567115	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000193405.5"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127341.1";
mm10-chrY	HAVANA	exon	24566930	24567115	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000193405.5"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-201"; exon_number 1; exon_id "ENSMUSE00001340123.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127341.1";
mm10-chrY	HAVANA	exon	24566259	24566440	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000193405.5"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-201"; exon_number 2; exon_id "ENSMUSE00001337429.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127341.1";
mm10-chrY	HAVANA	exon	24565346	24565529	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000193405.5"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-201"; exon_number 3; exon_id "ENSMUSE00001337317.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127341.1";
mm10-chrY	HAVANA	exon	24564751	24564819	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000193405.5"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-201"; exon_number 4; exon_id "ENSMUSE00001338663.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127341.1";
mm10-chrY	HAVANA	transcript	24564751	24567115	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000193738.1"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127342.1";
mm10-chrY	HAVANA	exon	24566930	24567115	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000193738.1"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-202"; exon_number 1; exon_id "ENSMUSE00001340123.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127342.1";
mm10-chrY	HAVANA	exon	24566259	24566440	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000193738.1"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-202"; exon_number 2; exon_id "ENSMUSE00001337429.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127342.1";
mm10-chrY	HAVANA	exon	24564751	24564819	.	-	.	gene_id "ENSMUSG00000102350.5"; transcript_id "ENSMUST00000193738.1"; gene_type "lincRNA"; gene_name "Gm37434"; transcript_type "lincRNA"; transcript_name "Gm37434-202"; exon_number 3; exon_id "ENSMUSE00001338663.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050066.1"; havana_transcript "OTTMUST00000127342.1";
mm10-chrY	HAVANA	gene	24604271	24604585	.	+	.	gene_id "ENSMUSG00000102993.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37765"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050067.1";
mm10-chrY	HAVANA	transcript	24604271	24604585	.	+	.	gene_id "ENSMUSG00000102993.1"; transcript_id "ENSMUST00000192395.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37765"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37765-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050067.1"; havana_transcript "OTTMUST00000127343.1";
mm10-chrY	HAVANA	exon	24604271	24604585	.	+	.	gene_id "ENSMUSG00000102993.1"; transcript_id "ENSMUST00000192395.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37765"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37765-201"; exon_number 1; exon_id "ENSMUSE00001341438.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050067.1"; havana_transcript "OTTMUST00000127343.1";
mm10-chrY	HAVANA	gene	24640852	24641547	.	+	.	gene_id "ENSMUSG00000103311.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38229"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050068.1";
mm10-chrY	HAVANA	transcript	24640852	24641547	.	+	.	gene_id "ENSMUSG00000103311.1"; transcript_id "ENSMUST00000191931.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38229"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38229-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050068.1"; havana_transcript "OTTMUST00000127344.1";
mm10-chrY	HAVANA	exon	24640852	24641547	.	+	.	gene_id "ENSMUSG00000103311.1"; transcript_id "ENSMUST00000191931.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38229"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38229-201"; exon_number 1; exon_id "ENSMUSE00001343721.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050068.1"; havana_transcript "OTTMUST00000127344.1";
mm10-chrY	HAVANA	gene	24701863	24726367	.	-	.	gene_id "ENSMUSG00000104070.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36866"; level 2; havana_gene "OTTMUSG00000050069.1";
mm10-chrY	HAVANA	transcript	24701863	24726367	.	-	.	gene_id "ENSMUSG00000104070.1"; transcript_id "ENSMUST00000193343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36866-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050069.1"; havana_transcript "OTTMUST00000127345.1";
mm10-chrY	HAVANA	exon	24726259	24726367	.	-	.	gene_id "ENSMUSG00000104070.1"; transcript_id "ENSMUST00000193343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36866-201"; exon_number 1; exon_id "ENSMUSE00001339947.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050069.1"; havana_transcript "OTTMUST00000127345.1";
mm10-chrY	HAVANA	exon	24720862	24720928	.	-	.	gene_id "ENSMUSG00000104070.1"; transcript_id "ENSMUST00000193343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36866-201"; exon_number 2; exon_id "ENSMUSE00001346379.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050069.1"; havana_transcript "OTTMUST00000127345.1";
mm10-chrY	HAVANA	exon	24720208	24720242	.	-	.	gene_id "ENSMUSG00000104070.1"; transcript_id "ENSMUST00000193343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36866-201"; exon_number 3; exon_id "ENSMUSE00001343512.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050069.1"; havana_transcript "OTTMUST00000127345.1";
mm10-chrY	HAVANA	exon	24713143	24713209	.	-	.	gene_id "ENSMUSG00000104070.1"; transcript_id "ENSMUST00000193343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36866-201"; exon_number 4; exon_id "ENSMUSE00001342762.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050069.1"; havana_transcript "OTTMUST00000127345.1";
mm10-chrY	HAVANA	exon	24712531	24712565	.	-	.	gene_id "ENSMUSG00000104070.1"; transcript_id "ENSMUST00000193343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36866-201"; exon_number 5; exon_id "ENSMUSE00001336260.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050069.1"; havana_transcript "OTTMUST00000127345.1";
mm10-chrY	HAVANA	exon	24705266	24705383	.	-	.	gene_id "ENSMUSG00000104070.1"; transcript_id "ENSMUST00000193343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36866-201"; exon_number 6; exon_id "ENSMUSE00001344201.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050069.1"; havana_transcript "OTTMUST00000127345.1";
mm10-chrY	HAVANA	exon	24704390	24704489	.	-	.	gene_id "ENSMUSG00000104070.1"; transcript_id "ENSMUST00000193343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36866-201"; exon_number 7; exon_id "ENSMUSE00001337517.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050069.1"; havana_transcript "OTTMUST00000127345.1";
mm10-chrY	HAVANA	exon	24702249	24702347	.	-	.	gene_id "ENSMUSG00000104070.1"; transcript_id "ENSMUST00000193343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36866-201"; exon_number 8; exon_id "ENSMUSE00001346315.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050069.1"; havana_transcript "OTTMUST00000127345.1";
mm10-chrY	HAVANA	exon	24701863	24701889	.	-	.	gene_id "ENSMUSG00000104070.1"; transcript_id "ENSMUST00000193343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm36866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm36866-201"; exon_number 9; exon_id "ENSMUSE00001344772.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050069.1"; havana_transcript "OTTMUST00000127345.1";
mm10-chrY	HAVANA	gene	24786618	24789853	.	-	.	gene_id "ENSMUSG00000103615.5"; gene_type "lincRNA"; gene_name "Gm30045"; level 2; havana_gene "OTTMUSG00000050070.1";
mm10-chrY	HAVANA	transcript	24786618	24789853	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000193438.5"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127346.1";
mm10-chrY	HAVANA	exon	24789218	24789853	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000193438.5"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-202"; exon_number 1; exon_id "ENSMUSE00001344562.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127346.1";
mm10-chrY	HAVANA	exon	24788547	24788732	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000193438.5"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-202"; exon_number 2; exon_id "ENSMUSE00001340484.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127346.1";
mm10-chrY	HAVANA	exon	24787634	24787817	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000193438.5"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-202"; exon_number 3; exon_id "ENSMUSE00001341466.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127346.1";
mm10-chrY	HAVANA	exon	24786618	24787106	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000193438.5"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-202"; exon_number 4; exon_id "ENSMUSE00001341595.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127346.1";
mm10-chrY	HAVANA	transcript	24787038	24789401	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000195452.5"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127347.1";
mm10-chrY	HAVANA	exon	24789218	24789401	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000195452.5"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-203"; exon_number 1; exon_id "ENSMUSE00001344583.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127347.1";
mm10-chrY	HAVANA	exon	24788547	24788728	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000195452.5"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-203"; exon_number 2; exon_id "ENSMUSE00001340410.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127347.1";
mm10-chrY	HAVANA	exon	24787634	24787817	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000195452.5"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-203"; exon_number 3; exon_id "ENSMUSE00001341466.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127347.1";
mm10-chrY	HAVANA	exon	24787038	24787106	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000195452.5"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-203"; exon_number 4; exon_id "ENSMUSE00001343705.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127347.1";
mm10-chrY	HAVANA	transcript	24787038	24789401	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000192308.1"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127348.1";
mm10-chrY	HAVANA	exon	24789218	24789401	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000192308.1"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-201"; exon_number 1; exon_id "ENSMUSE00001344583.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127348.1";
mm10-chrY	HAVANA	exon	24788547	24788728	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000192308.1"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-201"; exon_number 2; exon_id "ENSMUSE00001340410.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127348.1";
mm10-chrY	HAVANA	exon	24787038	24787106	.	-	.	gene_id "ENSMUSG00000103615.5"; transcript_id "ENSMUST00000192308.1"; gene_type "lincRNA"; gene_name "Gm30045"; transcript_type "lincRNA"; transcript_name "Gm30045-201"; exon_number 3; exon_id "ENSMUSE00001343705.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000050070.1"; havana_transcript "OTTMUST00000127348.1";
mm10-chrY	ENSEMBL	gene	24795161	24796243	.	-	.	gene_id "ENSMUSG00000094911.1"; gene_type "protein_coding"; gene_name "Gm21921"; level 3;
mm10-chrY	ENSEMBL	transcript	24795161	24796243	.	-	.	gene_id "ENSMUSG00000094911.1"; transcript_id "ENSMUST00000180040.1"; gene_type "protein_coding"; gene_name "Gm21921"; transcript_type "protein_coding"; transcript_name "Gm21921-201"; level 3; protein_id "ENSMUSP00000136538.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	24795161	24796243	.	-	.	gene_id "ENSMUSG00000094911.1"; transcript_id "ENSMUST00000180040.1"; gene_type "protein_coding"; gene_name "Gm21921"; transcript_type "protein_coding"; transcript_name "Gm21921-201"; exon_number 1; exon_id "ENSMUSE00000965718.1"; level 3; protein_id "ENSMUSP00000136538.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	24795161	24796243	.	-	0	gene_id "ENSMUSG00000094911.1"; transcript_id "ENSMUST00000180040.1"; gene_type "protein_coding"; gene_name "Gm21921"; transcript_type "protein_coding"; transcript_name "Gm21921-201"; exon_number 1; exon_id "ENSMUSE00000965718.1"; level 3; protein_id "ENSMUSP00000136538.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	24796241	24796243	.	-	0	gene_id "ENSMUSG00000094911.1"; transcript_id "ENSMUST00000180040.1"; gene_type "protein_coding"; gene_name "Gm21921"; transcript_type "protein_coding"; transcript_name "Gm21921-201"; exon_number 1; exon_id "ENSMUSE00000965718.1"; level 3; protein_id "ENSMUSP00000136538.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	24819391	24822739	.	+	.	gene_id "ENSMUSG00000104431.1"; gene_type "lincRNA"; gene_name "Gm37112"; level 2; havana_gene "OTTMUSG00000050071.1";
mm10-chrY	HAVANA	transcript	24819391	24822739	.	+	.	gene_id "ENSMUSG00000104431.1"; transcript_id "ENSMUST00000194389.1"; gene_type "lincRNA"; gene_name "Gm37112"; transcript_type "lincRNA"; transcript_name "Gm37112-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050071.1"; havana_transcript "OTTMUST00000127349.1";
mm10-chrY	HAVANA	exon	24819391	24819613	.	+	.	gene_id "ENSMUSG00000104431.1"; transcript_id "ENSMUST00000194389.1"; gene_type "lincRNA"; gene_name "Gm37112"; transcript_type "lincRNA"; transcript_name "Gm37112-201"; exon_number 1; exon_id "ENSMUSE00001345995.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050071.1"; havana_transcript "OTTMUST00000127349.1";
mm10-chrY	HAVANA	exon	24820795	24822739	.	+	.	gene_id "ENSMUSG00000104431.1"; transcript_id "ENSMUST00000194389.1"; gene_type "lincRNA"; gene_name "Gm37112"; transcript_type "lincRNA"; transcript_name "Gm37112-201"; exon_number 2; exon_id "ENSMUSE00001339092.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050071.1"; havana_transcript "OTTMUST00000127349.1";
mm10-chrY	HAVANA	gene	24828596	24829290	.	+	.	gene_id "ENSMUSG00000103758.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37287"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050072.1";
mm10-chrY	HAVANA	transcript	24828596	24829290	.	+	.	gene_id "ENSMUSG00000103758.1"; transcript_id "ENSMUST00000195449.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37287"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37287-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050072.1"; havana_transcript "OTTMUST00000127350.1";
mm10-chrY	HAVANA	exon	24828596	24829290	.	+	.	gene_id "ENSMUSG00000103758.1"; transcript_id "ENSMUST00000195449.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37287"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37287-201"; exon_number 1; exon_id "ENSMUSE00001344329.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050072.1"; havana_transcript "OTTMUST00000127350.1";
mm10-chrY	HAVANA	gene	24865431	24866045	.	+	.	gene_id "ENSMUSG00000104146.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30175"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050073.1";
mm10-chrY	HAVANA	transcript	24865431	24866045	.	+	.	gene_id "ENSMUSG00000104146.1"; transcript_id "ENSMUST00000194173.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30175"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30175-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050073.1"; havana_transcript "OTTMUST00000127351.1";
mm10-chrY	HAVANA	exon	24865431	24866045	.	+	.	gene_id "ENSMUSG00000104146.1"; transcript_id "ENSMUST00000194173.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30175"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30175-201"; exon_number 1; exon_id "ENSMUSE00001341390.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050073.1"; havana_transcript "OTTMUST00000127351.1";
mm10-chrY	HAVANA	gene	24894925	24895620	.	+	.	gene_id "ENSMUSG00000102507.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21350"; level 2; havana_gene "OTTMUSG00000050074.1";
mm10-chrY	HAVANA	transcript	24894925	24895620	.	+	.	gene_id "ENSMUSG00000102507.1"; transcript_id "ENSMUST00000195678.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21350"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21350-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050074.1"; havana_transcript "OTTMUST00000127352.1";
mm10-chrY	HAVANA	exon	24894925	24895620	.	+	.	gene_id "ENSMUSG00000102507.1"; transcript_id "ENSMUST00000195678.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21350"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21350-201"; exon_number 1; exon_id "ENSMUSE00001344978.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050074.1"; havana_transcript "OTTMUST00000127352.1";
mm10-chrY	HAVANA	gene	24969606	24970301	.	+	.	gene_id "ENSMUSG00000102358.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21412"; level 2; havana_gene "OTTMUSG00000049993.1";
mm10-chrY	HAVANA	transcript	24969606	24970301	.	+	.	gene_id "ENSMUSG00000102358.1"; transcript_id "ENSMUST00000194618.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21412"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21412-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049993.1"; havana_transcript "OTTMUST00000127209.1";
mm10-chrY	HAVANA	exon	24969606	24970301	.	+	.	gene_id "ENSMUSG00000102358.1"; transcript_id "ENSMUST00000194618.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21412"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21412-201"; exon_number 1; exon_id "ENSMUSE00001337662.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049993.1"; havana_transcript "OTTMUST00000127209.1";
mm10-chrY	HAVANA	gene	25077341	25080578	.	-	.	gene_id "ENSMUSG00000103977.5"; gene_type "lincRNA"; gene_name "Gm37071"; level 2; havana_gene "OTTMUSG00000049994.1";
mm10-chrY	HAVANA	transcript	25077341	25080578	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000195814.5"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127210.1";
mm10-chrY	HAVANA	exon	25079940	25080578	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000195814.5"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-203"; exon_number 1; exon_id "ENSMUSE00001343702.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127210.1";
mm10-chrY	HAVANA	exon	25079269	25079454	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000195814.5"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-203"; exon_number 2; exon_id "ENSMUSE00001343938.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127210.1";
mm10-chrY	HAVANA	exon	25078356	25078539	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000195814.5"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-203"; exon_number 3; exon_id "ENSMUSE00001341443.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127210.1";
mm10-chrY	HAVANA	exon	25077341	25077829	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000195814.5"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-203"; exon_number 4; exon_id "ENSMUSE00001336645.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127210.1";
mm10-chrY	HAVANA	transcript	25077761	25080125	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000194669.5"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127211.1";
mm10-chrY	HAVANA	exon	25079940	25080125	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000194669.5"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-202"; exon_number 1; exon_id "ENSMUSE00001344467.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127211.1";
mm10-chrY	HAVANA	exon	25079269	25079450	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000194669.5"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-202"; exon_number 2; exon_id "ENSMUSE00001342721.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127211.1";
mm10-chrY	HAVANA	exon	25078356	25078539	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000194669.5"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-202"; exon_number 3; exon_id "ENSMUSE00001341443.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127211.1";
mm10-chrY	HAVANA	exon	25077761	25077829	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000194669.5"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-202"; exon_number 4; exon_id "ENSMUSE00001345407.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127211.1";
mm10-chrY	HAVANA	transcript	25077761	25080125	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000191924.1"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127212.1";
mm10-chrY	HAVANA	exon	25079940	25080125	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000191924.1"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-201"; exon_number 1; exon_id "ENSMUSE00001344467.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127212.1";
mm10-chrY	HAVANA	exon	25079269	25079450	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000191924.1"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-201"; exon_number 2; exon_id "ENSMUSE00001342721.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127212.1";
mm10-chrY	HAVANA	exon	25077761	25077829	.	-	.	gene_id "ENSMUSG00000103977.5"; transcript_id "ENSMUST00000191924.1"; gene_type "lincRNA"; gene_name "Gm37071"; transcript_type "lincRNA"; transcript_name "Gm37071-201"; exon_number 3; exon_id "ENSMUSE00001345407.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049994.1"; havana_transcript "OTTMUST00000127212.1";
mm10-chrY	HAVANA	gene	25112581	25115921	.	+	.	gene_id "ENSMUSG00000102643.1"; gene_type "lincRNA"; gene_name "Gm37547"; level 2; havana_gene "OTTMUSG00000049995.1";
mm10-chrY	HAVANA	transcript	25112581	25115921	.	+	.	gene_id "ENSMUSG00000102643.1"; transcript_id "ENSMUST00000193277.1"; gene_type "lincRNA"; gene_name "Gm37547"; transcript_type "lincRNA"; transcript_name "Gm37547-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049995.1"; havana_transcript "OTTMUST00000127213.1";
mm10-chrY	HAVANA	exon	25112581	25112803	.	+	.	gene_id "ENSMUSG00000102643.1"; transcript_id "ENSMUST00000193277.1"; gene_type "lincRNA"; gene_name "Gm37547"; transcript_type "lincRNA"; transcript_name "Gm37547-201"; exon_number 1; exon_id "ENSMUSE00001344833.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049995.1"; havana_transcript "OTTMUST00000127213.1";
mm10-chrY	HAVANA	exon	25113980	25115921	.	+	.	gene_id "ENSMUSG00000102643.1"; transcript_id "ENSMUST00000193277.1"; gene_type "lincRNA"; gene_name "Gm37547"; transcript_type "lincRNA"; transcript_name "Gm37547-201"; exon_number 2; exon_id "ENSMUSE00001339292.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049995.1"; havana_transcript "OTTMUST00000127213.1";
mm10-chrY	HAVANA	gene	25117327	25117641	.	+	.	gene_id "ENSMUSG00000103064.1"; gene_type "processed_pseudogene"; gene_name "Gm36968"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049996.1";
mm10-chrY	HAVANA	transcript	25117327	25117641	.	+	.	gene_id "ENSMUSG00000103064.1"; transcript_id "ENSMUST00000193737.1"; gene_type "processed_pseudogene"; gene_name "Gm36968"; transcript_type "processed_pseudogene"; transcript_name "Gm36968-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049996.1"; havana_transcript "OTTMUST00000127214.1";
mm10-chrY	HAVANA	exon	25117327	25117641	.	+	.	gene_id "ENSMUSG00000103064.1"; transcript_id "ENSMUST00000193737.1"; gene_type "processed_pseudogene"; gene_name "Gm36968"; transcript_type "processed_pseudogene"; transcript_name "Gm36968-201"; exon_number 1; exon_id "ENSMUSE00001342514.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049996.1"; havana_transcript "OTTMUST00000127214.1";
mm10-chrY	HAVANA	gene	25153876	25154571	.	+	.	gene_id "ENSMUSG00000102842.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38035"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049997.1";
mm10-chrY	HAVANA	transcript	25153876	25154571	.	+	.	gene_id "ENSMUSG00000102842.1"; transcript_id "ENSMUST00000194427.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38035"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38035-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049997.1"; havana_transcript "OTTMUST00000127215.1";
mm10-chrY	HAVANA	exon	25153876	25154571	.	+	.	gene_id "ENSMUSG00000102842.1"; transcript_id "ENSMUST00000194427.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38035"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38035-201"; exon_number 1; exon_id "ENSMUSE00001339219.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049997.1"; havana_transcript "OTTMUST00000127215.1";
mm10-chrY	HAVANA	gene	25214932	25239462	.	-	.	gene_id "ENSMUSG00000103714.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20857"; level 2; havana_gene "OTTMUSG00000049998.1";
mm10-chrY	HAVANA	transcript	25214932	25239462	.	-	.	gene_id "ENSMUSG00000103714.1"; transcript_id "ENSMUST00000194766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20857"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20857-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049998.1"; havana_transcript "OTTMUST00000127216.1";
mm10-chrY	HAVANA	exon	25239354	25239462	.	-	.	gene_id "ENSMUSG00000103714.1"; transcript_id "ENSMUST00000194766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20857"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20857-201"; exon_number 1; exon_id "ENSMUSE00001342664.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049998.1"; havana_transcript "OTTMUST00000127216.1";
mm10-chrY	HAVANA	exon	25233960	25234026	.	-	.	gene_id "ENSMUSG00000103714.1"; transcript_id "ENSMUST00000194766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20857"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20857-201"; exon_number 2; exon_id "ENSMUSE00001344490.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049998.1"; havana_transcript "OTTMUST00000127216.1";
mm10-chrY	HAVANA	exon	25233306	25233340	.	-	.	gene_id "ENSMUSG00000103714.1"; transcript_id "ENSMUST00000194766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20857"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20857-201"; exon_number 3; exon_id "ENSMUSE00001337954.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049998.1"; havana_transcript "OTTMUST00000127216.1";
mm10-chrY	HAVANA	exon	25226243	25226309	.	-	.	gene_id "ENSMUSG00000103714.1"; transcript_id "ENSMUST00000194766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20857"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20857-201"; exon_number 4; exon_id "ENSMUSE00001343731.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049998.1"; havana_transcript "OTTMUST00000127216.1";
mm10-chrY	HAVANA	exon	25225632	25225666	.	-	.	gene_id "ENSMUSG00000103714.1"; transcript_id "ENSMUST00000194766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20857"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20857-201"; exon_number 5; exon_id "ENSMUSE00001340356.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049998.1"; havana_transcript "OTTMUST00000127216.1";
mm10-chrY	HAVANA	exon	25218366	25218483	.	-	.	gene_id "ENSMUSG00000103714.1"; transcript_id "ENSMUST00000194766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20857"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20857-201"; exon_number 6; exon_id "ENSMUSE00001341057.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049998.1"; havana_transcript "OTTMUST00000127216.1";
mm10-chrY	HAVANA	exon	25217462	25217561	.	-	.	gene_id "ENSMUSG00000103714.1"; transcript_id "ENSMUST00000194766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20857"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20857-201"; exon_number 7; exon_id "ENSMUSE00001337763.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049998.1"; havana_transcript "OTTMUST00000127216.1";
mm10-chrY	HAVANA	exon	25215318	25215416	.	-	.	gene_id "ENSMUSG00000103714.1"; transcript_id "ENSMUST00000194766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20857"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20857-201"; exon_number 8; exon_id "ENSMUSE00001344015.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049998.1"; havana_transcript "OTTMUST00000127216.1";
mm10-chrY	HAVANA	exon	25214932	25214958	.	-	.	gene_id "ENSMUSG00000103714.1"; transcript_id "ENSMUST00000194766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20857"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20857-201"; exon_number 9; exon_id "ENSMUSE00001336826.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049998.1"; havana_transcript "OTTMUST00000127216.1";
mm10-chrY	HAVANA	gene	25299747	25302982	.	-	.	gene_id "ENSMUSG00000103660.5"; gene_type "lincRNA"; gene_name "Gm30705"; level 2; havana_gene "OTTMUSG00000049999.1";
mm10-chrY	HAVANA	transcript	25299747	25302982	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000195660.5"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127217.1";
mm10-chrY	HAVANA	exon	25302347	25302982	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000195660.5"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-203"; exon_number 1; exon_id "ENSMUSE00001343753.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127217.1";
mm10-chrY	HAVANA	exon	25301676	25301861	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000195660.5"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-203"; exon_number 2; exon_id "ENSMUSE00001343507.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127217.1";
mm10-chrY	HAVANA	exon	25300763	25300946	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000195660.5"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-203"; exon_number 3; exon_id "ENSMUSE00001337618.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127217.1";
mm10-chrY	HAVANA	exon	25299747	25300235	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000195660.5"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-203"; exon_number 4; exon_id "ENSMUSE00001340996.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127217.1";
mm10-chrY	HAVANA	transcript	25300171	25302530	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000194784.5"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127218.1";
mm10-chrY	HAVANA	exon	25302347	25302530	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000194784.5"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-201"; exon_number 1; exon_id "ENSMUSE00001337760.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127218.1";
mm10-chrY	HAVANA	exon	25301676	25301857	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000194784.5"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-201"; exon_number 2; exon_id "ENSMUSE00001341911.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127218.1";
mm10-chrY	HAVANA	exon	25300763	25300946	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000194784.5"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-201"; exon_number 3; exon_id "ENSMUSE00001337618.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127218.1";
mm10-chrY	HAVANA	exon	25300171	25300235	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000194784.5"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-201"; exon_number 4; exon_id "ENSMUSE00001342732.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127218.1";
mm10-chrY	HAVANA	transcript	25300171	25302530	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000195482.1"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127219.1";
mm10-chrY	HAVANA	exon	25302347	25302530	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000195482.1"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-202"; exon_number 1; exon_id "ENSMUSE00001337760.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127219.1";
mm10-chrY	HAVANA	exon	25301676	25301857	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000195482.1"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-202"; exon_number 2; exon_id "ENSMUSE00001341911.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127219.1";
mm10-chrY	HAVANA	exon	25300171	25300235	.	-	.	gene_id "ENSMUSG00000103660.5"; transcript_id "ENSMUST00000195482.1"; gene_type "lincRNA"; gene_name "Gm30705"; transcript_type "lincRNA"; transcript_name "Gm30705-202"; exon_number 3; exon_id "ENSMUSE00001342732.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049999.1"; havana_transcript "OTTMUST00000127219.1";
mm10-chrY	ENSEMBL	gene	25308278	25309360	.	-	.	gene_id "ENSMUSG00000094939.1"; gene_type "protein_coding"; gene_name "Gm21773"; level 3;
mm10-chrY	ENSEMBL	transcript	25308278	25309360	.	-	.	gene_id "ENSMUSG00000094939.1"; transcript_id "ENSMUST00000179355.1"; gene_type "protein_coding"; gene_name "Gm21773"; transcript_type "protein_coding"; transcript_name "Gm21773-201"; level 3; protein_id "ENSMUSP00000136679.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	25308278	25309360	.	-	.	gene_id "ENSMUSG00000094939.1"; transcript_id "ENSMUST00000179355.1"; gene_type "protein_coding"; gene_name "Gm21773"; transcript_type "protein_coding"; transcript_name "Gm21773-201"; exon_number 1; exon_id "ENSMUSE00000987327.1"; level 3; protein_id "ENSMUSP00000136679.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	25308278	25309360	.	-	0	gene_id "ENSMUSG00000094939.1"; transcript_id "ENSMUST00000179355.1"; gene_type "protein_coding"; gene_name "Gm21773"; transcript_type "protein_coding"; transcript_name "Gm21773-201"; exon_number 1; exon_id "ENSMUSE00000987327.1"; level 3; protein_id "ENSMUSP00000136679.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	25309358	25309360	.	-	0	gene_id "ENSMUSG00000094939.1"; transcript_id "ENSMUST00000179355.1"; gene_type "protein_coding"; gene_name "Gm21773"; transcript_type "protein_coding"; transcript_name "Gm21773-201"; exon_number 1; exon_id "ENSMUSE00000987327.1"; level 3; protein_id "ENSMUSP00000136679.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	25332503	25335851	.	+	.	gene_id "ENSMUSG00000103982.1"; gene_type "lincRNA"; gene_name "Gm37451"; level 2; havana_gene "OTTMUSG00000050000.1";
mm10-chrY	HAVANA	transcript	25332503	25335851	.	+	.	gene_id "ENSMUSG00000103982.1"; transcript_id "ENSMUST00000194718.1"; gene_type "lincRNA"; gene_name "Gm37451"; transcript_type "lincRNA"; transcript_name "Gm37451-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050000.1"; havana_transcript "OTTMUST00000127220.1";
mm10-chrY	HAVANA	exon	25332503	25332725	.	+	.	gene_id "ENSMUSG00000103982.1"; transcript_id "ENSMUST00000194718.1"; gene_type "lincRNA"; gene_name "Gm37451"; transcript_type "lincRNA"; transcript_name "Gm37451-201"; exon_number 1; exon_id "ENSMUSE00001337048.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050000.1"; havana_transcript "OTTMUST00000127220.1";
mm10-chrY	HAVANA	exon	25333908	25335851	.	+	.	gene_id "ENSMUSG00000103982.1"; transcript_id "ENSMUST00000194718.1"; gene_type "lincRNA"; gene_name "Gm37451"; transcript_type "lincRNA"; transcript_name "Gm37451-201"; exon_number 2; exon_id "ENSMUSE00001342922.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000050000.1"; havana_transcript "OTTMUST00000127220.1";
mm10-chrY	HAVANA	gene	25341710	25342404	.	+	.	gene_id "ENSMUSG00000102328.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37793"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050001.1";
mm10-chrY	HAVANA	transcript	25341710	25342404	.	+	.	gene_id "ENSMUSG00000102328.1"; transcript_id "ENSMUST00000195548.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37793"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37793-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050001.1"; havana_transcript "OTTMUST00000127221.1";
mm10-chrY	HAVANA	exon	25341710	25342404	.	+	.	gene_id "ENSMUSG00000102328.1"; transcript_id "ENSMUST00000195548.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37793"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37793-201"; exon_number 1; exon_id "ENSMUSE00001344812.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050001.1"; havana_transcript "OTTMUST00000127221.1";
mm10-chrY	HAVANA	gene	25378537	25379151	.	+	.	gene_id "ENSMUSG00000103487.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30858"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050002.1";
mm10-chrY	HAVANA	transcript	25378537	25379151	.	+	.	gene_id "ENSMUSG00000103487.1"; transcript_id "ENSMUST00000195516.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30858-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050002.1"; havana_transcript "OTTMUST00000127222.1";
mm10-chrY	HAVANA	exon	25378537	25379151	.	+	.	gene_id "ENSMUSG00000103487.1"; transcript_id "ENSMUST00000195516.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm30858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm30858-201"; exon_number 1; exon_id "ENSMUSE00001343967.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050002.1"; havana_transcript "OTTMUST00000127222.1";
mm10-chrY	HAVANA	gene	25408061	25408756	.	+	.	gene_id "ENSMUSG00000103639.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21791"; level 2; havana_gene "OTTMUSG00000050003.1";
mm10-chrY	HAVANA	transcript	25408061	25408756	.	+	.	gene_id "ENSMUSG00000103639.1"; transcript_id "ENSMUST00000191631.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21791"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21791-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050003.1"; havana_transcript "OTTMUST00000127223.1";
mm10-chrY	HAVANA	exon	25408061	25408756	.	+	.	gene_id "ENSMUSG00000103639.1"; transcript_id "ENSMUST00000191631.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21791"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21791-201"; exon_number 1; exon_id "ENSMUSE00001343400.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050003.1"; havana_transcript "OTTMUST00000127223.1";
mm10-chrY	HAVANA	gene	25482701	25483396	.	+	.	gene_id "ENSMUSG00000104085.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21427"; level 2; havana_gene "OTTMUSG00000050004.1";
mm10-chrY	HAVANA	transcript	25482701	25483396	.	+	.	gene_id "ENSMUSG00000104085.1"; transcript_id "ENSMUST00000193270.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21427"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21427-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050004.1"; havana_transcript "OTTMUST00000127224.1";
mm10-chrY	HAVANA	exon	25482701	25483396	.	+	.	gene_id "ENSMUSG00000104085.1"; transcript_id "ENSMUST00000193270.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21427"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21427-201"; exon_number 1; exon_id "ENSMUSE00001338974.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050004.1"; havana_transcript "OTTMUST00000127224.1";
mm10-chrY	HAVANA	gene	25590418	25593655	.	-	.	gene_id "ENSMUSG00000102576.5"; gene_type "lincRNA"; gene_name "Gm37875"; level 2; havana_gene "OTTMUSG00000050005.1";
mm10-chrY	HAVANA	transcript	25590418	25593655	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000192101.5"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127225.1";
mm10-chrY	HAVANA	exon	25593017	25593655	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000192101.5"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-201"; exon_number 1; exon_id "ENSMUSE00001337279.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127225.1";
mm10-chrY	HAVANA	exon	25592346	25592531	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000192101.5"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-201"; exon_number 2; exon_id "ENSMUSE00001341261.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127225.1";
mm10-chrY	HAVANA	exon	25591433	25591616	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000192101.5"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-201"; exon_number 3; exon_id "ENSMUSE00001338956.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127225.1";
mm10-chrY	HAVANA	exon	25590418	25590906	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000192101.5"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-201"; exon_number 4; exon_id "ENSMUSE00001343838.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127225.1";
mm10-chrY	HAVANA	transcript	25590838	25593202	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000194818.5"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-203"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127226.1";
mm10-chrY	HAVANA	exon	25593017	25593202	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000194818.5"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-203"; exon_number 1; exon_id "ENSMUSE00001345502.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127226.1";
mm10-chrY	HAVANA	exon	25592346	25592527	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000194818.5"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-203"; exon_number 2; exon_id "ENSMUSE00001343548.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127226.1";
mm10-chrY	HAVANA	exon	25591433	25591616	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000194818.5"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-203"; exon_number 3; exon_id "ENSMUSE00001338956.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127226.1";
mm10-chrY	HAVANA	exon	25590838	25590906	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000194818.5"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-203"; exon_number 4; exon_id "ENSMUSE00001346033.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127226.1";
mm10-chrY	HAVANA	transcript	25590838	25593202	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000194353.1"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127227.1";
mm10-chrY	HAVANA	exon	25593017	25593202	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000194353.1"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-202"; exon_number 1; exon_id "ENSMUSE00001345502.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127227.1";
mm10-chrY	HAVANA	exon	25592346	25592527	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000194353.1"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-202"; exon_number 2; exon_id "ENSMUSE00001343548.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127227.1";
mm10-chrY	HAVANA	exon	25590838	25590906	.	-	.	gene_id "ENSMUSG00000102576.5"; transcript_id "ENSMUST00000194353.1"; gene_type "lincRNA"; gene_name "Gm37875"; transcript_type "lincRNA"; transcript_name "Gm37875-202"; exon_number 3; exon_id "ENSMUSE00001346033.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000050005.1"; havana_transcript "OTTMUST00000127227.1";
mm10-chrY	HAVANA	gene	25630403	25630717	.	+	.	gene_id "ENSMUSG00000103372.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37237"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050006.1";
mm10-chrY	HAVANA	transcript	25630403	25630717	.	+	.	gene_id "ENSMUSG00000103372.1"; transcript_id "ENSMUST00000192893.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37237"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37237-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050006.1"; havana_transcript "OTTMUST00000127228.1";
mm10-chrY	HAVANA	exon	25630403	25630717	.	+	.	gene_id "ENSMUSG00000103372.1"; transcript_id "ENSMUST00000192893.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37237"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37237-201"; exon_number 1; exon_id "ENSMUSE00001345328.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050006.1"; havana_transcript "OTTMUST00000127228.1";
mm10-chrY	HAVANA	gene	25666954	25667649	.	+	.	gene_id "ENSMUSG00000102354.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38350"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000050007.1";
mm10-chrY	HAVANA	transcript	25666954	25667649	.	+	.	gene_id "ENSMUSG00000102354.1"; transcript_id "ENSMUST00000194789.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38350"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38350-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050007.1"; havana_transcript "OTTMUST00000127229.1";
mm10-chrY	HAVANA	exon	25666954	25667649	.	+	.	gene_id "ENSMUSG00000102354.1"; transcript_id "ENSMUST00000194789.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm38350"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm38350-201"; exon_number 1; exon_id "ENSMUSE00001338330.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000050007.1"; havana_transcript "OTTMUST00000127229.1";
mm10-chrY	HAVANA	gene	25727994	25752495	.	-	.	gene_id "ENSMUSG00000102906.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20858"; level 2; havana_gene "OTTMUSG00000050008.1";
mm10-chrY	HAVANA	transcript	25727994	25752495	.	-	.	gene_id "ENSMUSG00000102906.1"; transcript_id "ENSMUST00000195459.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20858-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050008.1"; havana_transcript "OTTMUST00000127230.1";
mm10-chrY	HAVANA	exon	25752387	25752495	.	-	.	gene_id "ENSMUSG00000102906.1"; transcript_id "ENSMUST00000195459.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20858-201"; exon_number 1; exon_id "ENSMUSE00001344913.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050008.1"; havana_transcript "OTTMUST00000127230.1";
mm10-chrY	HAVANA	exon	25746991	25747057	.	-	.	gene_id "ENSMUSG00000102906.1"; transcript_id "ENSMUST00000195459.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20858-201"; exon_number 2; exon_id "ENSMUSE00001342666.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050008.1"; havana_transcript "OTTMUST00000127230.1";
mm10-chrY	HAVANA	exon	25746337	25746371	.	-	.	gene_id "ENSMUSG00000102906.1"; transcript_id "ENSMUST00000195459.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20858-201"; exon_number 3; exon_id "ENSMUSE00001345736.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050008.1"; havana_transcript "OTTMUST00000127230.1";
mm10-chrY	HAVANA	exon	25739288	25739354	.	-	.	gene_id "ENSMUSG00000102906.1"; transcript_id "ENSMUST00000195459.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20858-201"; exon_number 4; exon_id "ENSMUSE00001342574.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050008.1"; havana_transcript "OTTMUST00000127230.1";
mm10-chrY	HAVANA	exon	25738677	25738711	.	-	.	gene_id "ENSMUSG00000102906.1"; transcript_id "ENSMUST00000195459.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20858-201"; exon_number 5; exon_id "ENSMUSE00001337003.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050008.1"; havana_transcript "OTTMUST00000127230.1";
mm10-chrY	HAVANA	exon	25731413	25731530	.	-	.	gene_id "ENSMUSG00000102906.1"; transcript_id "ENSMUST00000195459.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20858-201"; exon_number 6; exon_id "ENSMUSE00001339060.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050008.1"; havana_transcript "OTTMUST00000127230.1";
mm10-chrY	HAVANA	exon	25730523	25730622	.	-	.	gene_id "ENSMUSG00000102906.1"; transcript_id "ENSMUST00000195459.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20858-201"; exon_number 7; exon_id "ENSMUSE00001339803.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050008.1"; havana_transcript "OTTMUST00000127230.1";
mm10-chrY	HAVANA	exon	25728380	25728478	.	-	.	gene_id "ENSMUSG00000102906.1"; transcript_id "ENSMUST00000195459.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20858-201"; exon_number 8; exon_id "ENSMUSE00001336795.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050008.1"; havana_transcript "OTTMUST00000127230.1";
mm10-chrY	HAVANA	exon	25727994	25728020	.	-	.	gene_id "ENSMUSG00000102906.1"; transcript_id "ENSMUST00000195459.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20858"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20858-201"; exon_number 9; exon_id "ENSMUSE00001343978.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000050008.1"; havana_transcript "OTTMUST00000127230.1";
mm10-chrY	HAVANA	gene	25812791	25816026	.	-	.	gene_id "ENSMUSG00000103813.5"; gene_type "lincRNA"; gene_name "Gm31422"; level 2; havana_gene "OTTMUSG00000049979.1";
mm10-chrY	HAVANA	transcript	25812791	25816026	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000195198.5"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127180.1";
mm10-chrY	HAVANA	exon	25815391	25816026	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000195198.5"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-203"; exon_number 1; exon_id "ENSMUSE00001343069.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127180.1";
mm10-chrY	HAVANA	exon	25814720	25814905	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000195198.5"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-203"; exon_number 2; exon_id "ENSMUSE00001339654.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127180.1";
mm10-chrY	HAVANA	exon	25813807	25813990	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000195198.5"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-203"; exon_number 3; exon_id "ENSMUSE00001336211.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127180.1";
mm10-chrY	HAVANA	exon	25812791	25813279	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000195198.5"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-203"; exon_number 4; exon_id "ENSMUSE00001345966.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127180.1";
mm10-chrY	HAVANA	transcript	25813211	25815574	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000191974.5"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127181.1";
mm10-chrY	HAVANA	exon	25815391	25815574	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000191974.5"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-201"; exon_number 1; exon_id "ENSMUSE00001337312.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127181.1";
mm10-chrY	HAVANA	exon	25814720	25814901	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000191974.5"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-201"; exon_number 2; exon_id "ENSMUSE00001339327.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127181.1";
mm10-chrY	HAVANA	exon	25813807	25813990	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000191974.5"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-201"; exon_number 3; exon_id "ENSMUSE00001336211.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127181.1";
mm10-chrY	HAVANA	exon	25813211	25813279	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000191974.5"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-201"; exon_number 4; exon_id "ENSMUSE00001336576.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127181.1";
mm10-chrY	HAVANA	transcript	25813211	25815574	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000192897.1"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127182.1";
mm10-chrY	HAVANA	exon	25815391	25815574	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000192897.1"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-202"; exon_number 1; exon_id "ENSMUSE00001337312.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127182.1";
mm10-chrY	HAVANA	exon	25814720	25814901	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000192897.1"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-202"; exon_number 2; exon_id "ENSMUSE00001339327.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127182.1";
mm10-chrY	HAVANA	exon	25813211	25813279	.	-	.	gene_id "ENSMUSG00000103813.5"; transcript_id "ENSMUST00000192897.1"; gene_type "lincRNA"; gene_name "Gm31422"; transcript_type "lincRNA"; transcript_name "Gm31422-202"; exon_number 3; exon_id "ENSMUSE00001336576.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049979.1"; havana_transcript "OTTMUST00000127182.1";
mm10-chrY	HAVANA	gene	25845560	25848910	.	+	.	gene_id "ENSMUSG00000104412.1"; gene_type "lincRNA"; gene_name "Gm37798"; level 2; havana_gene "OTTMUSG00000049980.1";
mm10-chrY	HAVANA	transcript	25845560	25848910	.	+	.	gene_id "ENSMUSG00000104412.1"; transcript_id "ENSMUST00000193026.1"; gene_type "lincRNA"; gene_name "Gm37798"; transcript_type "lincRNA"; transcript_name "Gm37798-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049980.1"; havana_transcript "OTTMUST00000127183.1";
mm10-chrY	HAVANA	exon	25845560	25845782	.	+	.	gene_id "ENSMUSG00000104412.1"; transcript_id "ENSMUST00000193026.1"; gene_type "lincRNA"; gene_name "Gm37798"; transcript_type "lincRNA"; transcript_name "Gm37798-201"; exon_number 1; exon_id "ENSMUSE00001345064.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049980.1"; havana_transcript "OTTMUST00000127183.1";
mm10-chrY	HAVANA	exon	25846965	25848910	.	+	.	gene_id "ENSMUSG00000104412.1"; transcript_id "ENSMUST00000193026.1"; gene_type "lincRNA"; gene_name "Gm37798"; transcript_type "lincRNA"; transcript_name "Gm37798-201"; exon_number 2; exon_id "ENSMUSE00001336940.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049980.1"; havana_transcript "OTTMUST00000127183.1";
mm10-chrY	HAVANA	gene	25854771	25855465	.	+	.	gene_id "ENSMUSG00000104321.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37318"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049969.1";
mm10-chrY	HAVANA	transcript	25854771	25855465	.	+	.	gene_id "ENSMUSG00000104321.1"; transcript_id "ENSMUST00000194325.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37318"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37318-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049969.1"; havana_transcript "OTTMUST00000127160.1";
mm10-chrY	HAVANA	exon	25854771	25855465	.	+	.	gene_id "ENSMUSG00000104321.1"; transcript_id "ENSMUST00000194325.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37318"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37318-201"; exon_number 1; exon_id "ENSMUSE00001337573.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049969.1"; havana_transcript "OTTMUST00000127160.1";
mm10-chrY	HAVANA	gene	25891627	25892241	.	+	.	gene_id "ENSMUSG00000103892.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31572"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049970.1";
mm10-chrY	HAVANA	transcript	25891627	25892241	.	+	.	gene_id "ENSMUSG00000103892.1"; transcript_id "ENSMUST00000193341.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31572"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31572-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049970.1"; havana_transcript "OTTMUST00000127161.1";
mm10-chrY	HAVANA	exon	25891627	25892241	.	+	.	gene_id "ENSMUSG00000103892.1"; transcript_id "ENSMUST00000193341.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm31572"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm31572-201"; exon_number 1; exon_id "ENSMUSE00001346386.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049970.1"; havana_transcript "OTTMUST00000127161.1";
mm10-chrY	HAVANA	gene	25921142	25921837	.	+	.	gene_id "ENSMUSG00000103969.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21890"; level 2; havana_gene "OTTMUSG00000049971.1";
mm10-chrY	HAVANA	transcript	25921142	25921837	.	+	.	gene_id "ENSMUSG00000103969.1"; transcript_id "ENSMUST00000195190.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21890"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21890-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049971.1"; havana_transcript "OTTMUST00000127162.1";
mm10-chrY	HAVANA	exon	25921142	25921837	.	+	.	gene_id "ENSMUSG00000103969.1"; transcript_id "ENSMUST00000195190.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21890"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21890-201"; exon_number 1; exon_id "ENSMUSE00001337442.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049971.1"; havana_transcript "OTTMUST00000127162.1";
mm10-chrY	HAVANA	gene	25995821	25996516	.	+	.	gene_id "ENSMUSG00000102339.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21443"; level 2; havana_gene "OTTMUSG00000049972.1";
mm10-chrY	HAVANA	transcript	25995821	25996516	.	+	.	gene_id "ENSMUSG00000102339.1"; transcript_id "ENSMUST00000179070.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21443"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21443-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049972.1"; havana_transcript "OTTMUST00000127163.1";
mm10-chrY	HAVANA	exon	25995821	25996516	.	+	.	gene_id "ENSMUSG00000102339.1"; transcript_id "ENSMUST00000179070.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21443"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21443-201"; exon_number 1; exon_id "ENSMUSE00001342088.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049972.1"; havana_transcript "OTTMUST00000127163.1";
mm10-chrY	HAVANA	gene	26103541	26106778	.	-	.	gene_id "ENSMUSG00000102977.5"; gene_type "lincRNA"; gene_name "Gm37346"; level 2; tag "retrogene"; havana_gene "OTTMUSG00000049973.1";
mm10-chrY	HAVANA	transcript	26103541	26106778	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000191665.5"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127164.1";
mm10-chrY	HAVANA	exon	26106140	26106778	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000191665.5"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-201"; exon_number 1; exon_id "ENSMUSE00001345417.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127164.1";
mm10-chrY	HAVANA	exon	26105469	26105654	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000191665.5"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-201"; exon_number 2; exon_id "ENSMUSE00001338548.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127164.1";
mm10-chrY	HAVANA	exon	26104556	26104739	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000191665.5"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-201"; exon_number 3; exon_id "ENSMUSE00001338747.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127164.1";
mm10-chrY	HAVANA	exon	26103541	26104029	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000191665.5"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-201"; exon_number 4; exon_id "ENSMUSE00001336366.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127164.1";
mm10-chrY	HAVANA	transcript	26103961	26106325	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000192092.5"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127165.1";
mm10-chrY	HAVANA	exon	26106140	26106325	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000192092.5"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-202"; exon_number 1; exon_id "ENSMUSE00001342286.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127165.1";
mm10-chrY	HAVANA	exon	26105469	26105650	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000192092.5"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-202"; exon_number 2; exon_id "ENSMUSE00001339902.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127165.1";
mm10-chrY	HAVANA	exon	26104556	26104739	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000192092.5"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-202"; exon_number 3; exon_id "ENSMUSE00001338747.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127165.1";
mm10-chrY	HAVANA	exon	26103961	26104029	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000192092.5"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-202"; exon_number 4; exon_id "ENSMUSE00001336593.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127165.1";
mm10-chrY	HAVANA	transcript	26103961	26106325	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000194724.1"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127166.1";
mm10-chrY	HAVANA	exon	26106140	26106325	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000194724.1"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-203"; exon_number 1; exon_id "ENSMUSE00001342286.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127166.1";
mm10-chrY	HAVANA	exon	26105469	26105650	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000194724.1"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-203"; exon_number 2; exon_id "ENSMUSE00001339902.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127166.1";
mm10-chrY	HAVANA	exon	26103961	26104029	.	-	.	gene_id "ENSMUSG00000102977.5"; transcript_id "ENSMUST00000194724.1"; gene_type "lincRNA"; gene_name "Gm37346"; transcript_type "lincRNA"; transcript_name "Gm37346-203"; exon_number 3; exon_id "ENSMUSE00001336593.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049973.1"; havana_transcript "OTTMUST00000127166.1";
mm10-chrY	HAVANA	gene	26138802	26142144	.	+	.	gene_id "ENSMUSG00000102547.1"; gene_type "lincRNA"; gene_name "Gm38136"; level 2; havana_gene "OTTMUSG00000049974.1";
mm10-chrY	HAVANA	transcript	26138802	26142144	.	+	.	gene_id "ENSMUSG00000102547.1"; transcript_id "ENSMUST00000194775.1"; gene_type "lincRNA"; gene_name "Gm38136"; transcript_type "lincRNA"; transcript_name "Gm38136-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049974.1"; havana_transcript "OTTMUST00000127167.1";
mm10-chrY	HAVANA	exon	26138802	26139024	.	+	.	gene_id "ENSMUSG00000102547.1"; transcript_id "ENSMUST00000194775.1"; gene_type "lincRNA"; gene_name "Gm38136"; transcript_type "lincRNA"; transcript_name "Gm38136-201"; exon_number 1; exon_id "ENSMUSE00001340604.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049974.1"; havana_transcript "OTTMUST00000127167.1";
mm10-chrY	HAVANA	exon	26140201	26142144	.	+	.	gene_id "ENSMUSG00000102547.1"; transcript_id "ENSMUST00000194775.1"; gene_type "lincRNA"; gene_name "Gm38136"; transcript_type "lincRNA"; transcript_name "Gm38136-201"; exon_number 2; exon_id "ENSMUSE00001342368.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049974.1"; havana_transcript "OTTMUST00000127167.1";
mm10-chrY	HAVANA	gene	26180163	26180858	.	+	.	gene_id "ENSMUSG00000103675.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37991"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049975.1";
mm10-chrY	HAVANA	transcript	26180163	26180858	.	+	.	gene_id "ENSMUSG00000103675.1"; transcript_id "ENSMUST00000194297.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37991"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37991-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049975.1"; havana_transcript "OTTMUST00000127168.1";
mm10-chrY	HAVANA	exon	26180163	26180858	.	+	.	gene_id "ENSMUSG00000103675.1"; transcript_id "ENSMUST00000194297.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm37991"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm37991-201"; exon_number 1; exon_id "ENSMUSE00001337939.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049975.1"; havana_transcript "OTTMUST00000127168.1";
mm10-chrY	HAVANA	gene	26208875	26209897	.	+	.	gene_id "ENSMUSG00000103842.1"; gene_type "lincRNA"; gene_name "Gm37808"; level 2; havana_gene "OTTMUSG00000049976.1";
mm10-chrY	HAVANA	transcript	26208875	26209897	.	+	.	gene_id "ENSMUSG00000103842.1"; transcript_id "ENSMUST00000192038.1"; gene_type "lincRNA"; gene_name "Gm37808"; transcript_type "lincRNA"; transcript_name "Gm37808-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049976.1"; havana_transcript "OTTMUST00000127169.1";
mm10-chrY	HAVANA	exon	26208875	26209145	.	+	.	gene_id "ENSMUSG00000103842.1"; transcript_id "ENSMUST00000192038.1"; gene_type "lincRNA"; gene_name "Gm37808"; transcript_type "lincRNA"; transcript_name "Gm37808-201"; exon_number 1; exon_id "ENSMUSE00001345468.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049976.1"; havana_transcript "OTTMUST00000127169.1";
mm10-chrY	HAVANA	exon	26209727	26209897	.	+	.	gene_id "ENSMUSG00000103842.1"; transcript_id "ENSMUST00000192038.1"; gene_type "lincRNA"; gene_name "Gm37808"; transcript_type "lincRNA"; transcript_name "Gm37808-201"; exon_number 2; exon_id "ENSMUSE00001339872.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049976.1"; havana_transcript "OTTMUST00000127169.1";
mm10-chrY	HAVANA	gene	26241150	26265649	.	-	.	gene_id "ENSMUSG00000104024.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33571"; level 2; havana_gene "OTTMUSG00000049956.1";
mm10-chrY	HAVANA	transcript	26241150	26265649	.	-	.	gene_id "ENSMUSG00000104024.1"; transcript_id "ENSMUST00000193271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33571"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33571-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049956.1"; havana_transcript "OTTMUST00000127139.1";
mm10-chrY	HAVANA	exon	26265541	26265649	.	-	.	gene_id "ENSMUSG00000104024.1"; transcript_id "ENSMUST00000193271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33571"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33571-201"; exon_number 1; exon_id "ENSMUSE00001341424.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049956.1"; havana_transcript "OTTMUST00000127139.1";
mm10-chrY	HAVANA	exon	26260145	26260211	.	-	.	gene_id "ENSMUSG00000104024.1"; transcript_id "ENSMUST00000193271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33571"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33571-201"; exon_number 2; exon_id "ENSMUSE00001337245.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049956.1"; havana_transcript "OTTMUST00000127139.1";
mm10-chrY	HAVANA	exon	26259491	26259525	.	-	.	gene_id "ENSMUSG00000104024.1"; transcript_id "ENSMUST00000193271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33571"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33571-201"; exon_number 3; exon_id "ENSMUSE00001340234.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049956.1"; havana_transcript "OTTMUST00000127139.1";
mm10-chrY	HAVANA	exon	26252427	26252493	.	-	.	gene_id "ENSMUSG00000104024.1"; transcript_id "ENSMUST00000193271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33571"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33571-201"; exon_number 4; exon_id "ENSMUSE00001341620.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049956.1"; havana_transcript "OTTMUST00000127139.1";
mm10-chrY	HAVANA	exon	26251816	26251850	.	-	.	gene_id "ENSMUSG00000104024.1"; transcript_id "ENSMUST00000193271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33571"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33571-201"; exon_number 5; exon_id "ENSMUSE00001338266.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049956.1"; havana_transcript "OTTMUST00000127139.1";
mm10-chrY	HAVANA	exon	26244553	26244670	.	-	.	gene_id "ENSMUSG00000104024.1"; transcript_id "ENSMUST00000193271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33571"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33571-201"; exon_number 6; exon_id "ENSMUSE00001341661.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049956.1"; havana_transcript "OTTMUST00000127139.1";
mm10-chrY	HAVANA	exon	26243679	26243778	.	-	.	gene_id "ENSMUSG00000104024.1"; transcript_id "ENSMUST00000193271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33571"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33571-201"; exon_number 7; exon_id "ENSMUSE00001337399.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049956.1"; havana_transcript "OTTMUST00000127139.1";
mm10-chrY	HAVANA	exon	26241536	26241634	.	-	.	gene_id "ENSMUSG00000104024.1"; transcript_id "ENSMUST00000193271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33571"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33571-201"; exon_number 8; exon_id "ENSMUSE00001340396.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049956.1"; havana_transcript "OTTMUST00000127139.1";
mm10-chrY	HAVANA	exon	26241150	26241176	.	-	.	gene_id "ENSMUSG00000104024.1"; transcript_id "ENSMUST00000193271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm33571"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm33571-201"; exon_number 9; exon_id "ENSMUSE00001342114.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049956.1"; havana_transcript "OTTMUST00000127139.1";
mm10-chrY	HAVANA	gene	26325925	26329160	.	-	.	gene_id "ENSMUSG00000103462.5"; gene_type "lincRNA"; gene_name "Gm32181"; level 2; havana_gene "OTTMUSG00000049957.1";
mm10-chrY	HAVANA	transcript	26325925	26329160	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000194268.5"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127140.1";
mm10-chrY	HAVANA	exon	26328525	26329160	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000194268.5"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-202"; exon_number 1; exon_id "ENSMUSE00001340136.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127140.1";
mm10-chrY	HAVANA	exon	26327854	26328039	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000194268.5"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-202"; exon_number 2; exon_id "ENSMUSE00001342545.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127140.1";
mm10-chrY	HAVANA	exon	26326941	26327124	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000194268.5"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-202"; exon_number 3; exon_id "ENSMUSE00001344284.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127140.1";
mm10-chrY	HAVANA	exon	26325925	26326413	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000194268.5"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-202"; exon_number 4; exon_id "ENSMUSE00001346054.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127140.1";
mm10-chrY	HAVANA	transcript	26326349	26328708	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000192820.5"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127141.1";
mm10-chrY	HAVANA	exon	26328525	26328708	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000192820.5"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-201"; exon_number 1; exon_id "ENSMUSE00001339673.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127141.1";
mm10-chrY	HAVANA	exon	26327854	26328035	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000192820.5"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-201"; exon_number 2; exon_id "ENSMUSE00001337566.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127141.1";
mm10-chrY	HAVANA	exon	26326941	26327124	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000192820.5"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-201"; exon_number 3; exon_id "ENSMUSE00001344284.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127141.1";
mm10-chrY	HAVANA	exon	26326349	26326413	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000192820.5"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-201"; exon_number 4; exon_id "ENSMUSE00001345528.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127141.1";
mm10-chrY	HAVANA	transcript	26326349	26328708	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000195871.1"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127142.1";
mm10-chrY	HAVANA	exon	26328525	26328708	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000195871.1"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-203"; exon_number 1; exon_id "ENSMUSE00001339673.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127142.1";
mm10-chrY	HAVANA	exon	26327854	26328035	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000195871.1"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-203"; exon_number 2; exon_id "ENSMUSE00001337566.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127142.1";
mm10-chrY	HAVANA	exon	26326349	26326413	.	-	.	gene_id "ENSMUSG00000103462.5"; transcript_id "ENSMUST00000195871.1"; gene_type "lincRNA"; gene_name "Gm32181"; transcript_type "lincRNA"; transcript_name "Gm32181-203"; exon_number 3; exon_id "ENSMUSE00001345528.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049957.1"; havana_transcript "OTTMUST00000127142.1";
mm10-chrY	HAVANA	gene	26367907	26368601	.	+	.	gene_id "ENSMUSG00000101467.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28662"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049686.1";
mm10-chrY	HAVANA	transcript	26367907	26368601	.	+	.	gene_id "ENSMUSG00000101467.1"; transcript_id "ENSMUST00000188446.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28662"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28662-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049686.1"; havana_transcript "OTTMUST00000126573.1";
mm10-chrY	HAVANA	exon	26367907	26368601	.	+	.	gene_id "ENSMUSG00000101467.1"; transcript_id "ENSMUST00000188446.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28662"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28662-201"; exon_number 1; exon_id "ENSMUSE00001321619.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049686.1"; havana_transcript "OTTMUST00000126573.1";
mm10-chrY	HAVANA	gene	26404738	26405352	.	+	.	gene_id "ENSMUSG00000101260.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28780"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049687.1";
mm10-chrY	HAVANA	transcript	26404738	26405352	.	+	.	gene_id "ENSMUSG00000101260.1"; transcript_id "ENSMUST00000190223.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28780"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28780-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049687.1"; havana_transcript "OTTMUST00000126574.1";
mm10-chrY	HAVANA	exon	26404738	26405352	.	+	.	gene_id "ENSMUSG00000101260.1"; transcript_id "ENSMUST00000190223.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28780"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28780-201"; exon_number 1; exon_id "ENSMUSE00001333948.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049687.1"; havana_transcript "OTTMUST00000126574.1";
mm10-chrY	HAVANA	gene	26434218	26434913	.	+	.	gene_id "ENSMUSG00000101105.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21755"; level 2; havana_gene "OTTMUSG00000049688.1";
mm10-chrY	HAVANA	transcript	26434218	26434913	.	+	.	gene_id "ENSMUSG00000101105.1"; transcript_id "ENSMUST00000191507.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21755"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21755-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049688.1"; havana_transcript "OTTMUST00000126575.1";
mm10-chrY	HAVANA	exon	26434218	26434913	.	+	.	gene_id "ENSMUSG00000101105.1"; transcript_id "ENSMUST00000191507.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21755"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21755-201"; exon_number 1; exon_id "ENSMUSE00001320900.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049688.1"; havana_transcript "OTTMUST00000126575.1";
mm10-chrY	HAVANA	gene	26508824	26509516	.	+	.	gene_id "ENSMUSG00000099346.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20895"; level 2; havana_gene "OTTMUSG00000049689.1";
mm10-chrY	HAVANA	transcript	26508824	26509516	.	+	.	gene_id "ENSMUSG00000099346.1"; transcript_id "ENSMUST00000189601.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20895"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20895-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049689.1"; havana_transcript "OTTMUST00000126576.1";
mm10-chrY	HAVANA	exon	26508824	26509516	.	+	.	gene_id "ENSMUSG00000099346.1"; transcript_id "ENSMUST00000189601.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20895"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20895-201"; exon_number 1; exon_id "ENSMUSE00001329181.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049689.1"; havana_transcript "OTTMUST00000126576.1";
mm10-chrY	HAVANA	gene	26610456	26613352	.	-	.	gene_id "ENSMUSG00000101513.6"; gene_type "lincRNA"; gene_name "Gm28853"; level 2; havana_gene "OTTMUSG00000049614.1";
mm10-chrY	HAVANA	transcript	26610456	26613352	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000188084.6"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126415.1";
mm10-chrY	HAVANA	exon	26613058	26613352	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000188084.6"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-202"; exon_number 1; exon_id "ENSMUSE00001325412.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126415.1";
mm10-chrY	HAVANA	exon	26612387	26612572	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000188084.6"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-202"; exon_number 2; exon_id "ENSMUSE00001335403.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126415.1";
mm10-chrY	HAVANA	exon	26611474	26611657	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000188084.6"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-202"; exon_number 3; exon_id "ENSMUSE00001322218.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126415.1";
mm10-chrY	HAVANA	exon	26610456	26610947	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000188084.6"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-202"; exon_number 4; exon_id "ENSMUSE00001329864.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126415.1";
mm10-chrY	HAVANA	transcript	26610879	26613243	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000188505.6"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126416.1";
mm10-chrY	HAVANA	exon	26613058	26613243	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000188505.6"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-203"; exon_number 1; exon_id "ENSMUSE00001321556.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126416.1";
mm10-chrY	HAVANA	exon	26612387	26612568	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000188505.6"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-203"; exon_number 2; exon_id "ENSMUSE00001324543.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126416.1";
mm10-chrY	HAVANA	exon	26611474	26611657	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000188505.6"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-203"; exon_number 3; exon_id "ENSMUSE00001322218.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126416.1";
mm10-chrY	HAVANA	exon	26610879	26610947	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000188505.6"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-203"; exon_number 4; exon_id "ENSMUSE00001332665.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126416.1";
mm10-chrY	HAVANA	transcript	26610879	26613243	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000185271.1"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126417.1";
mm10-chrY	HAVANA	exon	26613058	26613243	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000185271.1"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-201"; exon_number 1; exon_id "ENSMUSE00001321556.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126417.1";
mm10-chrY	HAVANA	exon	26612387	26612568	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000185271.1"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-201"; exon_number 2; exon_id "ENSMUSE00001324543.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126417.1";
mm10-chrY	HAVANA	exon	26610879	26610947	.	-	.	gene_id "ENSMUSG00000101513.6"; transcript_id "ENSMUST00000185271.1"; gene_type "lincRNA"; gene_name "Gm28853"; transcript_type "lincRNA"; transcript_name "Gm28853-201"; exon_number 3; exon_id "ENSMUSE00001332665.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049614.1"; havana_transcript "OTTMUST00000126417.1";
mm10-chrY	HAVANA	gene	26648450	26651786	.	+	.	gene_id "ENSMUSG00000101809.1"; gene_type "lincRNA"; gene_name "Gm28852"; level 2; havana_gene "OTTMUSG00000049615.1";
mm10-chrY	HAVANA	transcript	26648450	26651786	.	+	.	gene_id "ENSMUSG00000101809.1"; transcript_id "ENSMUST00000186666.1"; gene_type "lincRNA"; gene_name "Gm28852"; transcript_type "lincRNA"; transcript_name "Gm28852-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049615.1"; havana_transcript "OTTMUST00000126418.1";
mm10-chrY	HAVANA	exon	26648450	26648672	.	+	.	gene_id "ENSMUSG00000101809.1"; transcript_id "ENSMUST00000186666.1"; gene_type "lincRNA"; gene_name "Gm28852"; transcript_type "lincRNA"; transcript_name "Gm28852-201"; exon_number 1; exon_id "ENSMUSE00001323638.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049615.1"; havana_transcript "OTTMUST00000126418.1";
mm10-chrY	HAVANA	exon	26649850	26651786	.	+	.	gene_id "ENSMUSG00000101809.1"; transcript_id "ENSMUST00000186666.1"; gene_type "lincRNA"; gene_name "Gm28852"; transcript_type "lincRNA"; transcript_name "Gm28852-201"; exon_number 2; exon_id "ENSMUSE00001320617.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049615.1"; havana_transcript "OTTMUST00000126418.1";
mm10-chrY	HAVANA	gene	26653194	26653508	.	+	.	gene_id "ENSMUSG00000099841.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28855"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049616.1";
mm10-chrY	HAVANA	transcript	26653194	26653508	.	+	.	gene_id "ENSMUSG00000099841.1"; transcript_id "ENSMUST00000188680.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28855"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28855-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049616.1"; havana_transcript "OTTMUST00000126419.1";
mm10-chrY	HAVANA	exon	26653194	26653508	.	+	.	gene_id "ENSMUSG00000099841.1"; transcript_id "ENSMUST00000188680.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28855"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28855-201"; exon_number 1; exon_id "ENSMUSE00001329204.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049616.1"; havana_transcript "OTTMUST00000126419.1";
mm10-chrY	HAVANA	gene	26689809	26690504	.	+	.	gene_id "ENSMUSG00000099573.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28854"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049617.1";
mm10-chrY	HAVANA	transcript	26689809	26690504	.	+	.	gene_id "ENSMUSG00000099573.1"; transcript_id "ENSMUST00000186218.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28854"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28854-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049617.1"; havana_transcript "OTTMUST00000126420.1";
mm10-chrY	HAVANA	exon	26689809	26690504	.	+	.	gene_id "ENSMUSG00000099573.1"; transcript_id "ENSMUST00000186218.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28854"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28854-201"; exon_number 1; exon_id "ENSMUSE00001329290.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049617.1"; havana_transcript "OTTMUST00000126420.1";
mm10-chrY	HAVANA	gene	26731225	26731671	.	-	.	gene_id "ENSMUSG00000102104.1"; gene_type "lincRNA"; gene_name "Gm28858"; level 2; havana_gene "OTTMUSG00000049618.1";
mm10-chrY	HAVANA	transcript	26731225	26731671	.	-	.	gene_id "ENSMUSG00000102104.1"; transcript_id "ENSMUST00000190517.1"; gene_type "lincRNA"; gene_name "Gm28858"; transcript_type "lincRNA"; transcript_name "Gm28858-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049618.1"; havana_transcript "OTTMUST00000126421.1";
mm10-chrY	HAVANA	exon	26731567	26731671	.	-	.	gene_id "ENSMUSG00000102104.1"; transcript_id "ENSMUST00000190517.1"; gene_type "lincRNA"; gene_name "Gm28858"; transcript_type "lincRNA"; transcript_name "Gm28858-201"; exon_number 1; exon_id "ENSMUSE00001335863.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049618.1"; havana_transcript "OTTMUST00000126421.1";
mm10-chrY	HAVANA	exon	26731225	26731285	.	-	.	gene_id "ENSMUSG00000102104.1"; transcript_id "ENSMUST00000190517.1"; gene_type "lincRNA"; gene_name "Gm28858"; transcript_type "lincRNA"; transcript_name "Gm28858-201"; exon_number 2; exon_id "ENSMUSE00001322048.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049618.1"; havana_transcript "OTTMUST00000126421.1";
mm10-chrY	HAVANA	gene	26750605	26776799	.	-	.	gene_id "ENSMUSG00000100055.1"; gene_type "protein_coding"; gene_name "Gm20890"; level 2; havana_gene "OTTMUSG00000049619.1";
mm10-chrY	HAVANA	transcript	26750605	26776799	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	exon	26776756	26776799	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 1; exon_id "ENSMUSE00001321005.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	exon	26775259	26775390	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 2; exon_id "ENSMUSE00001323808.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	CDS	26775259	26775376	.	-	0	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 2; exon_id "ENSMUSE00001323808.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	start_codon	26775374	26775376	.	-	0	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 2; exon_id "ENSMUSE00001323808.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	exon	26769862	26769928	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 3; exon_id "ENSMUSE00001331235.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	CDS	26769862	26769928	.	-	2	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 3; exon_id "ENSMUSE00001331235.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	exon	26769168	26769202	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 4; exon_id "ENSMUSE00001334129.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	CDS	26769168	26769202	.	-	1	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 4; exon_id "ENSMUSE00001334129.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	exon	26762093	26762159	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 5; exon_id "ENSMUSE00001327519.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	CDS	26762093	26762159	.	-	2	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 5; exon_id "ENSMUSE00001327519.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	exon	26761482	26761516	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 6; exon_id "ENSMUSE00001326854.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	CDS	26761482	26761516	.	-	1	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 6; exon_id "ENSMUSE00001326854.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	exon	26754194	26754311	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 7; exon_id "ENSMUSE00001322562.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	CDS	26754194	26754311	.	-	2	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 7; exon_id "ENSMUSE00001322562.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	exon	26753328	26753427	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 8; exon_id "ENSMUSE00001329738.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	CDS	26753328	26753427	.	-	1	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 8; exon_id "ENSMUSE00001329738.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	exon	26751190	26751288	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 9; exon_id "ENSMUSE00001333338.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	CDS	26751190	26751288	.	-	0	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 9; exon_id "ENSMUSE00001333338.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	exon	26750605	26750830	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 10; exon_id "ENSMUSE00001334201.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	CDS	26750804	26750830	.	-	0	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 10; exon_id "ENSMUSE00001334201.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	stop_codon	26750801	26750803	.	-	0	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 10; exon_id "ENSMUSE00001334201.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	UTR	26776756	26776799	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 1; exon_id "ENSMUSE00001321005.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	UTR	26775377	26775390	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 2; exon_id "ENSMUSE00001323808.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	UTR	26750605	26750803	.	-	.	gene_id "ENSMUSG00000100055.1"; transcript_id "ENSMUST00000189518.1"; gene_type "protein_coding"; gene_name "Gm20890"; transcript_type "protein_coding"; transcript_name "Gm20890-201"; exon_number 10; exon_id "ENSMUSE00001334201.1"; level 2; protein_id "ENSMUSP00000140218.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049619.1"; havana_transcript "OTTMUST00000126422.1";
mm10-chrY	HAVANA	gene	26835628	26838863	.	-	.	gene_id "ENSMUSG00000101929.6"; gene_type "lincRNA"; gene_name "Gm28245"; level 2; havana_gene "OTTMUSG00000049620.1";
mm10-chrY	HAVANA	transcript	26835628	26838863	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000191551.6"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126423.1";
mm10-chrY	HAVANA	exon	26838228	26838863	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000191551.6"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-203"; exon_number 1; exon_id "ENSMUSE00001322169.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126423.1";
mm10-chrY	HAVANA	exon	26837557	26837742	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000191551.6"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-203"; exon_number 2; exon_id "ENSMUSE00001333348.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126423.1";
mm10-chrY	HAVANA	exon	26836644	26836827	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000191551.6"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-203"; exon_number 3; exon_id "ENSMUSE00001330197.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126423.1";
mm10-chrY	HAVANA	exon	26835628	26836116	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000191551.6"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-203"; exon_number 4; exon_id "ENSMUSE00001323611.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126423.1";
mm10-chrY	HAVANA	transcript	26836048	26838411	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000189796.6"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126424.1";
mm10-chrY	HAVANA	exon	26838228	26838411	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000189796.6"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-202"; exon_number 1; exon_id "ENSMUSE00001319417.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126424.1";
mm10-chrY	HAVANA	exon	26837557	26837738	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000189796.6"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-202"; exon_number 2; exon_id "ENSMUSE00001323220.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126424.1";
mm10-chrY	HAVANA	exon	26836644	26836827	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000189796.6"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-202"; exon_number 3; exon_id "ENSMUSE00001330197.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126424.1";
mm10-chrY	HAVANA	exon	26836048	26836116	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000189796.6"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-202"; exon_number 4; exon_id "ENSMUSE00001331356.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126424.1";
mm10-chrY	HAVANA	transcript	26836048	26838411	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000189093.1"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126425.1";
mm10-chrY	HAVANA	exon	26838228	26838411	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000189093.1"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-201"; exon_number 1; exon_id "ENSMUSE00001319417.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126425.1";
mm10-chrY	HAVANA	exon	26837557	26837738	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000189093.1"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-201"; exon_number 2; exon_id "ENSMUSE00001323220.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126425.1";
mm10-chrY	HAVANA	exon	26836048	26836116	.	-	.	gene_id "ENSMUSG00000101929.6"; transcript_id "ENSMUST00000189093.1"; gene_type "lincRNA"; gene_name "Gm28245"; transcript_type "lincRNA"; transcript_name "Gm28245-201"; exon_number 3; exon_id "ENSMUSE00001331356.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049620.1"; havana_transcript "OTTMUST00000126425.1";
mm10-chrY	HAVANA	gene	26871887	26875234	.	+	.	gene_id "ENSMUSG00000101971.1"; gene_type "lincRNA"; gene_name "Gm28246"; level 2; havana_gene "OTTMUSG00000049621.1";
mm10-chrY	HAVANA	transcript	26871887	26875234	.	+	.	gene_id "ENSMUSG00000101971.1"; transcript_id "ENSMUST00000188308.1"; gene_type "lincRNA"; gene_name "Gm28246"; transcript_type "lincRNA"; transcript_name "Gm28246-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049621.1"; havana_transcript "OTTMUST00000126426.1";
mm10-chrY	HAVANA	exon	26871887	26872109	.	+	.	gene_id "ENSMUSG00000101971.1"; transcript_id "ENSMUST00000188308.1"; gene_type "lincRNA"; gene_name "Gm28246"; transcript_type "lincRNA"; transcript_name "Gm28246-201"; exon_number 1; exon_id "ENSMUSE00001323911.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049621.1"; havana_transcript "OTTMUST00000126426.1";
mm10-chrY	HAVANA	exon	26873291	26875234	.	+	.	gene_id "ENSMUSG00000101971.1"; transcript_id "ENSMUST00000188308.1"; gene_type "lincRNA"; gene_name "Gm28246"; transcript_type "lincRNA"; transcript_name "Gm28246-201"; exon_number 2; exon_id "ENSMUSE00001335078.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049621.1"; havana_transcript "OTTMUST00000126426.1";
mm10-chrY	HAVANA	gene	26881125	26881820	.	+	.	gene_id "ENSMUSG00000101839.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28247"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049622.1";
mm10-chrY	HAVANA	transcript	26881125	26881820	.	+	.	gene_id "ENSMUSG00000101839.1"; transcript_id "ENSMUST00000189329.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28247"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28247-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049622.1"; havana_transcript "OTTMUST00000126427.1";
mm10-chrY	HAVANA	exon	26881125	26881820	.	+	.	gene_id "ENSMUSG00000101839.1"; transcript_id "ENSMUST00000189329.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28247"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28247-201"; exon_number 1; exon_id "ENSMUSE00001336108.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049622.1"; havana_transcript "OTTMUST00000126427.1";
mm10-chrY	HAVANA	gene	26918028	26918642	.	+	.	gene_id "ENSMUSG00000102010.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28248"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049623.1";
mm10-chrY	HAVANA	transcript	26918028	26918642	.	+	.	gene_id "ENSMUSG00000102010.1"; transcript_id "ENSMUST00000186093.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28248"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28248-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049623.1"; havana_transcript "OTTMUST00000126428.1";
mm10-chrY	HAVANA	exon	26918028	26918642	.	+	.	gene_id "ENSMUSG00000102010.1"; transcript_id "ENSMUST00000186093.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28248"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28248-201"; exon_number 1; exon_id "ENSMUSE00001322993.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049623.1"; havana_transcript "OTTMUST00000126428.1";
mm10-chrY	HAVANA	gene	26947544	26948239	.	+	.	gene_id "ENSMUSG00000101149.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20892"; level 2; havana_gene "OTTMUSG00000049624.1";
mm10-chrY	HAVANA	transcript	26947544	26948239	.	+	.	gene_id "ENSMUSG00000101149.1"; transcript_id "ENSMUST00000190755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20892"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20892-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049624.1"; havana_transcript "OTTMUST00000126429.1";
mm10-chrY	HAVANA	exon	26947544	26948239	.	+	.	gene_id "ENSMUSG00000101149.1"; transcript_id "ENSMUST00000190755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20892"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20892-201"; exon_number 1; exon_id "ENSMUSE00001329957.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049624.1"; havana_transcript "OTTMUST00000126429.1";
mm10-chrY	HAVANA	gene	27065926	27069161	.	-	.	gene_id "ENSMUSG00000101743.6"; gene_type "lincRNA"; gene_name "Gm28249"; level 2; havana_gene "OTTMUSG00000049625.1";
mm10-chrY	HAVANA	transcript	27065926	27069161	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000190011.6"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126430.1";
mm10-chrY	HAVANA	exon	27068526	27069161	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000190011.6"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-203"; exon_number 1; exon_id "ENSMUSE00001331451.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126430.1";
mm10-chrY	HAVANA	exon	27067855	27068040	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000190011.6"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-203"; exon_number 2; exon_id "ENSMUSE00001322969.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126430.1";
mm10-chrY	HAVANA	exon	27066942	27067125	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000190011.6"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-203"; exon_number 3; exon_id "ENSMUSE00001335710.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126430.1";
mm10-chrY	HAVANA	exon	27065926	27066414	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000190011.6"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-203"; exon_number 4; exon_id "ENSMUSE00001320056.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126430.1";
mm10-chrY	HAVANA	transcript	27066346	27068709	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000187822.6"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126431.1";
mm10-chrY	HAVANA	exon	27068526	27068709	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000187822.6"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-202"; exon_number 1; exon_id "ENSMUSE00001325805.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126431.1";
mm10-chrY	HAVANA	exon	27067855	27068036	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000187822.6"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-202"; exon_number 2; exon_id "ENSMUSE00001330911.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126431.1";
mm10-chrY	HAVANA	exon	27066942	27067125	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000187822.6"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-202"; exon_number 3; exon_id "ENSMUSE00001335710.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126431.1";
mm10-chrY	HAVANA	exon	27066346	27066414	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000187822.6"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-202"; exon_number 4; exon_id "ENSMUSE00001330079.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126431.1";
mm10-chrY	HAVANA	transcript	27066346	27068709	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000187703.1"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126432.1";
mm10-chrY	HAVANA	exon	27068526	27068709	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000187703.1"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-201"; exon_number 1; exon_id "ENSMUSE00001325805.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126432.1";
mm10-chrY	HAVANA	exon	27067855	27068036	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000187703.1"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-201"; exon_number 2; exon_id "ENSMUSE00001330911.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126432.1";
mm10-chrY	HAVANA	exon	27066346	27066414	.	-	.	gene_id "ENSMUSG00000101743.6"; transcript_id "ENSMUST00000187703.1"; gene_type "lincRNA"; gene_name "Gm28249"; transcript_type "lincRNA"; transcript_name "Gm28249-201"; exon_number 3; exon_id "ENSMUSE00001330079.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049625.1"; havana_transcript "OTTMUST00000126432.1";
mm10-chrY	HAVANA	gene	27103779	27107127	.	+	.	gene_id "ENSMUSG00000101311.1"; gene_type "lincRNA"; gene_name "Gm28250"; level 2; havana_gene "OTTMUSG00000049626.1";
mm10-chrY	HAVANA	transcript	27103779	27107127	.	+	.	gene_id "ENSMUSG00000101311.1"; transcript_id "ENSMUST00000187025.1"; gene_type "lincRNA"; gene_name "Gm28250"; transcript_type "lincRNA"; transcript_name "Gm28250-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049626.1"; havana_transcript "OTTMUST00000126433.1";
mm10-chrY	HAVANA	exon	27103779	27104001	.	+	.	gene_id "ENSMUSG00000101311.1"; transcript_id "ENSMUST00000187025.1"; gene_type "lincRNA"; gene_name "Gm28250"; transcript_type "lincRNA"; transcript_name "Gm28250-201"; exon_number 1; exon_id "ENSMUSE00001321747.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049626.1"; havana_transcript "OTTMUST00000126433.1";
mm10-chrY	HAVANA	exon	27105183	27107127	.	+	.	gene_id "ENSMUSG00000101311.1"; transcript_id "ENSMUST00000187025.1"; gene_type "lincRNA"; gene_name "Gm28250"; transcript_type "lincRNA"; transcript_name "Gm28250-201"; exon_number 2; exon_id "ENSMUSE00001323113.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049626.1"; havana_transcript "OTTMUST00000126433.1";
mm10-chrY	HAVANA	gene	27112987	27113681	.	+	.	gene_id "ENSMUSG00000100803.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28251"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049627.1";
mm10-chrY	HAVANA	transcript	27112987	27113681	.	+	.	gene_id "ENSMUSG00000100803.1"; transcript_id "ENSMUST00000188835.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28251"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28251-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049627.1"; havana_transcript "OTTMUST00000126434.1";
mm10-chrY	HAVANA	exon	27112987	27113681	.	+	.	gene_id "ENSMUSG00000100803.1"; transcript_id "ENSMUST00000188835.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28251"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28251-201"; exon_number 1; exon_id "ENSMUSE00001326669.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049627.1"; havana_transcript "OTTMUST00000126434.1";
mm10-chrY	HAVANA	gene	27149813	27150427	.	+	.	gene_id "ENSMUSG00000100873.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28243"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049628.1";
mm10-chrY	HAVANA	transcript	27149813	27150427	.	+	.	gene_id "ENSMUSG00000100873.1"; transcript_id "ENSMUST00000187801.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28243"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28243-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049628.1"; havana_transcript "OTTMUST00000126435.1";
mm10-chrY	HAVANA	exon	27149813	27150427	.	+	.	gene_id "ENSMUSG00000100873.1"; transcript_id "ENSMUST00000187801.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28243"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28243-201"; exon_number 1; exon_id "ENSMUSE00001329757.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049628.1"; havana_transcript "OTTMUST00000126435.1";
mm10-chrY	HAVANA	gene	27161577	27163118	.	-	.	gene_id "ENSMUSG00000101692.1"; gene_type "lincRNA"; gene_name "Gm28244"; level 2; havana_gene "OTTMUSG00000049629.1";
mm10-chrY	HAVANA	transcript	27161577	27163118	.	-	.	gene_id "ENSMUSG00000101692.1"; transcript_id "ENSMUST00000189342.1"; gene_type "lincRNA"; gene_name "Gm28244"; transcript_type "lincRNA"; transcript_name "Gm28244-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049629.1"; havana_transcript "OTTMUST00000126436.1";
mm10-chrY	HAVANA	exon	27162901	27163118	.	-	.	gene_id "ENSMUSG00000101692.1"; transcript_id "ENSMUST00000189342.1"; gene_type "lincRNA"; gene_name "Gm28244"; transcript_type "lincRNA"; transcript_name "Gm28244-201"; exon_number 1; exon_id "ENSMUSE00001334939.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049629.1"; havana_transcript "OTTMUST00000126436.1";
mm10-chrY	HAVANA	exon	27161577	27161714	.	-	.	gene_id "ENSMUSG00000101692.1"; transcript_id "ENSMUST00000189342.1"; gene_type "lincRNA"; gene_name "Gm28244"; transcript_type "lincRNA"; transcript_name "Gm28244-201"; exon_number 2; exon_id "ENSMUSE00001331301.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049629.1"; havana_transcript "OTTMUST00000126436.1";
mm10-chrY	HAVANA	gene	27179288	27179983	.	+	.	gene_id "ENSMUSG00000100464.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21771"; level 2; havana_gene "OTTMUSG00000049630.1";
mm10-chrY	HAVANA	transcript	27179288	27179983	.	+	.	gene_id "ENSMUSG00000100464.1"; transcript_id "ENSMUST00000188693.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21771"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21771-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049630.1"; havana_transcript "OTTMUST00000126437.1";
mm10-chrY	HAVANA	exon	27179288	27179983	.	+	.	gene_id "ENSMUSG00000100464.1"; transcript_id "ENSMUST00000188693.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21771"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21771-201"; exon_number 1; exon_id "ENSMUSE00001319777.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049630.1"; havana_transcript "OTTMUST00000126437.1";
mm10-chrY	HAVANA	gene	27253916	27254608	.	+	.	gene_id "ENSMUSG00000102015.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21476"; level 2; havana_gene "OTTMUSG00000049631.1";
mm10-chrY	HAVANA	transcript	27253916	27254608	.	+	.	gene_id "ENSMUSG00000102015.1"; transcript_id "ENSMUST00000187167.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21476"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21476-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049631.1"; havana_transcript "OTTMUST00000126438.1";
mm10-chrY	HAVANA	exon	27253916	27254608	.	+	.	gene_id "ENSMUSG00000102015.1"; transcript_id "ENSMUST00000187167.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21476"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21476-201"; exon_number 1; exon_id "ENSMUSE00001328274.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049631.1"; havana_transcript "OTTMUST00000126438.1";
mm10-chrY	HAVANA	gene	27355544	27358781	.	-	.	gene_id "ENSMUSG00000101198.6"; gene_type "lincRNA"; gene_name "Gm29021"; level 2; havana_gene "OTTMUSG00000049515.1";
mm10-chrY	HAVANA	transcript	27355544	27358781	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000185451.6"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126236.1";
mm10-chrY	HAVANA	exon	27358143	27358781	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000185451.6"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-201"; exon_number 1; exon_id "ENSMUSE00001323044.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126236.1";
mm10-chrY	HAVANA	exon	27357472	27357657	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000185451.6"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-201"; exon_number 2; exon_id "ENSMUSE00001325662.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126236.1";
mm10-chrY	HAVANA	exon	27356559	27356742	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000185451.6"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-201"; exon_number 3; exon_id "ENSMUSE00001328753.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126236.1";
mm10-chrY	HAVANA	exon	27355544	27356032	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000185451.6"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-201"; exon_number 4; exon_id "ENSMUSE00001322803.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126236.1";
mm10-chrY	HAVANA	transcript	27355968	27358328	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000190966.6"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126237.1";
mm10-chrY	HAVANA	exon	27358143	27358328	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000190966.6"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-203"; exon_number 1; exon_id "ENSMUSE00001319765.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126237.1";
mm10-chrY	HAVANA	exon	27357472	27357653	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000190966.6"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-203"; exon_number 2; exon_id "ENSMUSE00001323812.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126237.1";
mm10-chrY	HAVANA	exon	27356559	27356742	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000190966.6"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-203"; exon_number 3; exon_id "ENSMUSE00001328753.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126237.1";
mm10-chrY	HAVANA	exon	27355968	27356032	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000190966.6"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-203"; exon_number 4; exon_id "ENSMUSE00001324323.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126237.1";
mm10-chrY	HAVANA	transcript	27355968	27358328	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000190839.1"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126238.1";
mm10-chrY	HAVANA	exon	27358143	27358328	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000190839.1"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-202"; exon_number 1; exon_id "ENSMUSE00001319765.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126238.1";
mm10-chrY	HAVANA	exon	27357472	27357653	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000190839.1"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-202"; exon_number 2; exon_id "ENSMUSE00001323812.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126238.1";
mm10-chrY	HAVANA	exon	27355968	27356032	.	-	.	gene_id "ENSMUSG00000101198.6"; transcript_id "ENSMUST00000190839.1"; gene_type "lincRNA"; gene_name "Gm29021"; transcript_type "lincRNA"; transcript_name "Gm29021-202"; exon_number 3; exon_id "ENSMUSE00001324323.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049515.1"; havana_transcript "OTTMUST00000126238.1";
mm10-chrY	HAVANA	gene	27393538	27396874	.	+	.	gene_id "ENSMUSG00000099955.1"; gene_type "lincRNA"; gene_name "Gm28880"; level 2; havana_gene "OTTMUSG00000049516.1";
mm10-chrY	HAVANA	transcript	27393538	27396874	.	+	.	gene_id "ENSMUSG00000099955.1"; transcript_id "ENSMUST00000190161.1"; gene_type "lincRNA"; gene_name "Gm28880"; transcript_type "lincRNA"; transcript_name "Gm28880-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049516.1"; havana_transcript "OTTMUST00000126239.1";
mm10-chrY	HAVANA	exon	27393538	27393760	.	+	.	gene_id "ENSMUSG00000099955.1"; transcript_id "ENSMUST00000190161.1"; gene_type "lincRNA"; gene_name "Gm28880"; transcript_type "lincRNA"; transcript_name "Gm28880-201"; exon_number 1; exon_id "ENSMUSE00001332003.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049516.1"; havana_transcript "OTTMUST00000126239.1";
mm10-chrY	HAVANA	exon	27394938	27396874	.	+	.	gene_id "ENSMUSG00000099955.1"; transcript_id "ENSMUST00000190161.1"; gene_type "lincRNA"; gene_name "Gm28880"; transcript_type "lincRNA"; transcript_name "Gm28880-201"; exon_number 2; exon_id "ENSMUSE00001331985.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049516.1"; havana_transcript "OTTMUST00000126239.1";
mm10-chrY	HAVANA	gene	27434899	27435594	.	+	.	gene_id "ENSMUSG00000099873.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28452"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049581.1";
mm10-chrY	HAVANA	transcript	27434899	27435594	.	+	.	gene_id "ENSMUSG00000099873.1"; transcript_id "ENSMUST00000186623.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28452"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28452-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049581.1"; havana_transcript "OTTMUST00000126348.1";
mm10-chrY	HAVANA	exon	27434899	27435594	.	+	.	gene_id "ENSMUSG00000099873.1"; transcript_id "ENSMUST00000186623.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28452"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28452-201"; exon_number 1; exon_id "ENSMUSE00001318909.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049581.1"; havana_transcript "OTTMUST00000126348.1";
mm10-chrY	HAVANA	gene	27495726	27521920	.	-	.	gene_id "ENSMUSG00000099541.1"; gene_type "protein_coding"; gene_name "Gm21488"; level 2; havana_gene "OTTMUSG00000049517.1";
mm10-chrY	HAVANA	transcript	27495726	27521920	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	exon	27521877	27521920	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 1; exon_id "ENSMUSE00001319303.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	exon	27520380	27520511	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 2; exon_id "ENSMUSE00001335326.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	CDS	27520380	27520497	.	-	0	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 2; exon_id "ENSMUSE00001335326.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	start_codon	27520495	27520497	.	-	0	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 2; exon_id "ENSMUSE00001335326.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	exon	27514983	27515049	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 3; exon_id "ENSMUSE00001319975.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	CDS	27514983	27515049	.	-	2	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 3; exon_id "ENSMUSE00001319975.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	exon	27514289	27514323	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 4; exon_id "ENSMUSE00001332885.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	CDS	27514289	27514323	.	-	1	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 4; exon_id "ENSMUSE00001332885.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	exon	27507215	27507281	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 5; exon_id "ENSMUSE00001321871.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	CDS	27507215	27507281	.	-	2	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 5; exon_id "ENSMUSE00001321871.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	exon	27506604	27506638	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 6; exon_id "ENSMUSE00001330957.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	CDS	27506604	27506638	.	-	1	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 6; exon_id "ENSMUSE00001330957.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	exon	27499315	27499432	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 7; exon_id "ENSMUSE00001331056.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	CDS	27499315	27499432	.	-	2	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 7; exon_id "ENSMUSE00001331056.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	exon	27498449	27498548	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 8; exon_id "ENSMUSE00001323381.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	CDS	27498449	27498548	.	-	1	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 8; exon_id "ENSMUSE00001323381.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	exon	27496311	27496409	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 9; exon_id "ENSMUSE00001334156.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	CDS	27496311	27496409	.	-	0	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 9; exon_id "ENSMUSE00001334156.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	exon	27495726	27495951	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 10; exon_id "ENSMUSE00001322788.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	CDS	27495925	27495951	.	-	0	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 10; exon_id "ENSMUSE00001322788.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	stop_codon	27495922	27495924	.	-	0	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 10; exon_id "ENSMUSE00001322788.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	UTR	27521877	27521920	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 1; exon_id "ENSMUSE00001319303.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	UTR	27520498	27520511	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 2; exon_id "ENSMUSE00001335326.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	UTR	27495726	27495924	.	-	.	gene_id "ENSMUSG00000099541.1"; transcript_id "ENSMUST00000188744.1"; gene_type "protein_coding"; gene_name "Gm21488"; transcript_type "protein_coding"; transcript_name "Gm21488-201"; exon_number 10; exon_id "ENSMUSE00001322788.1"; level 2; protein_id "ENSMUSP00000140532.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049517.1"; havana_transcript "OTTMUST00000126240.1";
mm10-chrY	HAVANA	gene	27580750	27583985	.	-	.	gene_id "ENSMUSG00000101920.6"; gene_type "lincRNA"; gene_name "Gm28454"; level 2; havana_gene "OTTMUSG00000049582.1";
mm10-chrY	HAVANA	transcript	27580750	27583985	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000190183.6"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126349.1";
mm10-chrY	HAVANA	exon	27583350	27583985	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000190183.6"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-203"; exon_number 1; exon_id "ENSMUSE00001334827.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126349.1";
mm10-chrY	HAVANA	exon	27582679	27582864	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000190183.6"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-203"; exon_number 2; exon_id "ENSMUSE00001331986.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126349.1";
mm10-chrY	HAVANA	exon	27581766	27581949	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000190183.6"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-203"; exon_number 3; exon_id "ENSMUSE00001332434.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126349.1";
mm10-chrY	HAVANA	exon	27580750	27581238	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000190183.6"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-203"; exon_number 4; exon_id "ENSMUSE00001324408.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126349.1";
mm10-chrY	HAVANA	transcript	27581174	27583533	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000189111.6"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126350.1";
mm10-chrY	HAVANA	exon	27583350	27583533	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000189111.6"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-202"; exon_number 1; exon_id "ENSMUSE00001335616.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126350.1";
mm10-chrY	HAVANA	exon	27582679	27582860	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000189111.6"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-202"; exon_number 2; exon_id "ENSMUSE00001330006.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126350.1";
mm10-chrY	HAVANA	exon	27581766	27581949	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000189111.6"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-202"; exon_number 3; exon_id "ENSMUSE00001332434.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126350.1";
mm10-chrY	HAVANA	exon	27581174	27581238	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000189111.6"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-202"; exon_number 4; exon_id "ENSMUSE00001318263.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126350.1";
mm10-chrY	HAVANA	transcript	27581174	27583533	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000186901.1"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126351.1";
mm10-chrY	HAVANA	exon	27583350	27583533	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000186901.1"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-201"; exon_number 1; exon_id "ENSMUSE00001335616.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126351.1";
mm10-chrY	HAVANA	exon	27582679	27582860	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000186901.1"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-201"; exon_number 2; exon_id "ENSMUSE00001330006.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126351.1";
mm10-chrY	HAVANA	exon	27581174	27581238	.	-	.	gene_id "ENSMUSG00000101920.6"; transcript_id "ENSMUST00000186901.1"; gene_type "lincRNA"; gene_name "Gm28454"; transcript_type "lincRNA"; transcript_name "Gm28454-201"; exon_number 3; exon_id "ENSMUSE00001318263.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049582.1"; havana_transcript "OTTMUST00000126351.1";
mm10-chrY	HAVANA	gene	27616996	27620343	.	+	.	gene_id "ENSMUSG00000099430.1"; gene_type "lincRNA"; gene_name "Gm28878"; level 2; havana_gene "OTTMUSG00000049518.1";
mm10-chrY	HAVANA	transcript	27616996	27620343	.	+	.	gene_id "ENSMUSG00000099430.1"; transcript_id "ENSMUST00000188272.1"; gene_type "lincRNA"; gene_name "Gm28878"; transcript_type "lincRNA"; transcript_name "Gm28878-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049518.1"; havana_transcript "OTTMUST00000126241.1";
mm10-chrY	HAVANA	exon	27616996	27617218	.	+	.	gene_id "ENSMUSG00000099430.1"; transcript_id "ENSMUST00000188272.1"; gene_type "lincRNA"; gene_name "Gm28878"; transcript_type "lincRNA"; transcript_name "Gm28878-201"; exon_number 1; exon_id "ENSMUSE00001335611.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049518.1"; havana_transcript "OTTMUST00000126241.1";
mm10-chrY	HAVANA	exon	27618400	27620343	.	+	.	gene_id "ENSMUSG00000099430.1"; transcript_id "ENSMUST00000188272.1"; gene_type "lincRNA"; gene_name "Gm28878"; transcript_type "lincRNA"; transcript_name "Gm28878-201"; exon_number 2; exon_id "ENSMUSE00001331005.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049518.1"; havana_transcript "OTTMUST00000126241.1";
mm10-chrY	HAVANA	gene	27626234	27626929	.	+	.	gene_id "ENSMUSG00000100099.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28879"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049519.1";
mm10-chrY	HAVANA	transcript	27626234	27626929	.	+	.	gene_id "ENSMUSG00000100099.1"; transcript_id "ENSMUST00000190973.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28879"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28879-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049519.1"; havana_transcript "OTTMUST00000126242.1";
mm10-chrY	HAVANA	exon	27626234	27626929	.	+	.	gene_id "ENSMUSG00000100099.1"; transcript_id "ENSMUST00000190973.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28879"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28879-201"; exon_number 1; exon_id "ENSMUSE00001327207.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049519.1"; havana_transcript "OTTMUST00000126242.1";
mm10-chrY	HAVANA	gene	27663126	27663740	.	+	.	gene_id "ENSMUSG00000100495.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29369"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049520.1";
mm10-chrY	HAVANA	transcript	27663126	27663740	.	+	.	gene_id "ENSMUSG00000100495.1"; transcript_id "ENSMUST00000190674.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29369"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29369-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049520.1"; havana_transcript "OTTMUST00000126243.1";
mm10-chrY	HAVANA	exon	27663126	27663740	.	+	.	gene_id "ENSMUSG00000100495.1"; transcript_id "ENSMUST00000190674.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29369"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29369-201"; exon_number 1; exon_id "ENSMUSE00001331389.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049520.1"; havana_transcript "OTTMUST00000126243.1";
mm10-chrY	HAVANA	gene	27692628	27693323	.	+	.	gene_id "ENSMUSG00000100413.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21506"; level 2; havana_gene "OTTMUSG00000049583.1";
mm10-chrY	HAVANA	transcript	27692628	27693323	.	+	.	gene_id "ENSMUSG00000100413.1"; transcript_id "ENSMUST00000190786.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21506"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21506-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049583.1"; havana_transcript "OTTMUST00000126352.1";
mm10-chrY	HAVANA	exon	27692628	27693323	.	+	.	gene_id "ENSMUSG00000100413.1"; transcript_id "ENSMUST00000190786.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21506"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21506-201"; exon_number 1; exon_id "ENSMUSE00001335497.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049583.1"; havana_transcript "OTTMUST00000126352.1";
mm10-chrY	HAVANA	gene	27811020	27814255	.	-	.	gene_id "ENSMUSG00000100570.6"; gene_type "lincRNA"; gene_name "Gm29399"; level 2; havana_gene "OTTMUSG00000049537.2";
mm10-chrY	HAVANA	transcript	27811020	27814255	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000187292.6"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126274.1";
mm10-chrY	HAVANA	exon	27813620	27814255	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000187292.6"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-202"; exon_number 1; exon_id "ENSMUSE00001324423.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126274.1";
mm10-chrY	HAVANA	exon	27812949	27813134	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000187292.6"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-202"; exon_number 2; exon_id "ENSMUSE00001334084.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126274.1";
mm10-chrY	HAVANA	exon	27812036	27812219	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000187292.6"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-202"; exon_number 3; exon_id "ENSMUSE00001319258.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126274.1";
mm10-chrY	HAVANA	exon	27811020	27811508	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000187292.6"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-202"; exon_number 4; exon_id "ENSMUSE00001323245.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126274.1";
mm10-chrY	HAVANA	transcript	27811444	27813803	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000190828.6"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-203"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126353.1";
mm10-chrY	HAVANA	exon	27813620	27813803	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000190828.6"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-203"; exon_number 1; exon_id "ENSMUSE00001320103.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126353.1";
mm10-chrY	HAVANA	exon	27812949	27813130	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000190828.6"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-203"; exon_number 2; exon_id "ENSMUSE00001335954.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126353.1";
mm10-chrY	HAVANA	exon	27812036	27812219	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000190828.6"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-203"; exon_number 3; exon_id "ENSMUSE00001319258.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126353.1";
mm10-chrY	HAVANA	exon	27811444	27811508	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000190828.6"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-203"; exon_number 4; exon_id "ENSMUSE00001318016.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126353.1";
mm10-chrY	HAVANA	transcript	27811444	27813803	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000186457.1"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126354.1";
mm10-chrY	HAVANA	exon	27813620	27813803	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000186457.1"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-201"; exon_number 1; exon_id "ENSMUSE00001320103.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126354.1";
mm10-chrY	HAVANA	exon	27812949	27813130	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000186457.1"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-201"; exon_number 2; exon_id "ENSMUSE00001335954.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126354.1";
mm10-chrY	HAVANA	exon	27811444	27811508	.	-	.	gene_id "ENSMUSG00000100570.6"; transcript_id "ENSMUST00000186457.1"; gene_type "lincRNA"; gene_name "Gm29399"; transcript_type "lincRNA"; transcript_name "Gm29399-201"; exon_number 3; exon_id "ENSMUSE00001318016.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049537.2"; havana_transcript "OTTMUST00000126354.1";
mm10-chrY	HAVANA	gene	27857973	27858667	.	+	.	gene_id "ENSMUSG00000101863.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29400"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049538.1";
mm10-chrY	HAVANA	transcript	27857973	27858667	.	+	.	gene_id "ENSMUSG00000101863.1"; transcript_id "ENSMUST00000187208.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29400"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29400-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049538.1"; havana_transcript "OTTMUST00000126275.1";
mm10-chrY	HAVANA	exon	27857973	27858667	.	+	.	gene_id "ENSMUSG00000101863.1"; transcript_id "ENSMUST00000187208.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29400"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29400-201"; exon_number 1; exon_id "ENSMUSE00001324489.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049538.1"; havana_transcript "OTTMUST00000126275.1";
mm10-chrY	HAVANA	gene	27894779	27895393	.	+	.	gene_id "ENSMUSG00000099727.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29401"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049539.1";
mm10-chrY	HAVANA	transcript	27894779	27895393	.	+	.	gene_id "ENSMUSG00000099727.1"; transcript_id "ENSMUST00000186690.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29401"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29401-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049539.1"; havana_transcript "OTTMUST00000126276.1";
mm10-chrY	HAVANA	exon	27894779	27895393	.	+	.	gene_id "ENSMUSG00000099727.1"; transcript_id "ENSMUST00000186690.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29401"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29401-201"; exon_number 1; exon_id "ENSMUSE00001318221.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049539.1"; havana_transcript "OTTMUST00000126276.1";
mm10-chrY	HAVANA	gene	27924318	27925013	.	+	.	gene_id "ENSMUSG00000099791.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20891"; level 2; havana_gene "OTTMUSG00000049540.1";
mm10-chrY	HAVANA	transcript	27924318	27925013	.	+	.	gene_id "ENSMUSG00000099791.1"; transcript_id "ENSMUST00000191560.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20891-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049540.1"; havana_transcript "OTTMUST00000126277.1";
mm10-chrY	HAVANA	exon	27924318	27925013	.	+	.	gene_id "ENSMUSG00000099791.1"; transcript_id "ENSMUST00000191560.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20891"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20891-201"; exon_number 1; exon_id "ENSMUSE00001324057.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049540.1"; havana_transcript "OTTMUST00000126277.1";
mm10-chrY	HAVANA	gene	27998840	27999532	.	+	.	gene_id "ENSMUSG00000101473.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20893"; level 2; havana_gene "OTTMUSG00000049339.1";
mm10-chrY	HAVANA	transcript	27998840	27999532	.	+	.	gene_id "ENSMUSG00000101473.1"; transcript_id "ENSMUST00000191376.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20893"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20893-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049339.1"; havana_transcript "OTTMUST00000125786.1";
mm10-chrY	HAVANA	exon	27998840	27999532	.	+	.	gene_id "ENSMUSG00000101473.1"; transcript_id "ENSMUST00000191376.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20893"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20893-201"; exon_number 1; exon_id "ENSMUSE00001324300.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049339.1"; havana_transcript "OTTMUST00000125786.1";
mm10-chrY	HAVANA	gene	28105189	28108426	.	-	.	gene_id "ENSMUSG00000101753.1"; gene_type "lincRNA"; gene_name "Gm28799"; level 2; havana_gene "OTTMUSG00000049340.1";
mm10-chrY	HAVANA	transcript	28105189	28108426	.	-	.	gene_id "ENSMUSG00000101753.1"; transcript_id "ENSMUST00000186506.1"; gene_type "lincRNA"; gene_name "Gm28799"; transcript_type "lincRNA"; transcript_name "Gm28799-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049340.1"; havana_transcript "OTTMUST00000125787.1";
mm10-chrY	HAVANA	exon	28107788	28108426	.	-	.	gene_id "ENSMUSG00000101753.1"; transcript_id "ENSMUST00000186506.1"; gene_type "lincRNA"; gene_name "Gm28799"; transcript_type "lincRNA"; transcript_name "Gm28799-201"; exon_number 1; exon_id "ENSMUSE00001326720.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049340.1"; havana_transcript "OTTMUST00000125787.1";
mm10-chrY	HAVANA	exon	28107117	28107302	.	-	.	gene_id "ENSMUSG00000101753.1"; transcript_id "ENSMUST00000186506.1"; gene_type "lincRNA"; gene_name "Gm28799"; transcript_type "lincRNA"; transcript_name "Gm28799-201"; exon_number 2; exon_id "ENSMUSE00001326612.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049340.1"; havana_transcript "OTTMUST00000125787.1";
mm10-chrY	HAVANA	exon	28106204	28106387	.	-	.	gene_id "ENSMUSG00000101753.1"; transcript_id "ENSMUST00000186506.1"; gene_type "lincRNA"; gene_name "Gm28799"; transcript_type "lincRNA"; transcript_name "Gm28799-201"; exon_number 3; exon_id "ENSMUSE00001322656.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049340.1"; havana_transcript "OTTMUST00000125787.1";
mm10-chrY	HAVANA	exon	28105189	28105677	.	-	.	gene_id "ENSMUSG00000101753.1"; transcript_id "ENSMUST00000186506.1"; gene_type "lincRNA"; gene_name "Gm28799"; transcript_type "lincRNA"; transcript_name "Gm28799-201"; exon_number 4; exon_id "ENSMUSE00001320972.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049340.1"; havana_transcript "OTTMUST00000125787.1";
mm10-chrY	HAVANA	gene	28143148	28146485	.	+	.	gene_id "ENSMUSG00000101484.1"; gene_type "lincRNA"; gene_name "Gm28798"; level 2; havana_gene "OTTMUSG00000049341.1";
mm10-chrY	HAVANA	transcript	28143148	28146485	.	+	.	gene_id "ENSMUSG00000101484.1"; transcript_id "ENSMUST00000186372.1"; gene_type "lincRNA"; gene_name "Gm28798"; transcript_type "lincRNA"; transcript_name "Gm28798-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049341.1"; havana_transcript "OTTMUST00000125788.1";
mm10-chrY	HAVANA	exon	28143148	28143370	.	+	.	gene_id "ENSMUSG00000101484.1"; transcript_id "ENSMUST00000186372.1"; gene_type "lincRNA"; gene_name "Gm28798"; transcript_type "lincRNA"; transcript_name "Gm28798-201"; exon_number 1; exon_id "ENSMUSE00001323927.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049341.1"; havana_transcript "OTTMUST00000125788.1";
mm10-chrY	HAVANA	exon	28144548	28146485	.	+	.	gene_id "ENSMUSG00000101484.1"; transcript_id "ENSMUST00000186372.1"; gene_type "lincRNA"; gene_name "Gm28798"; transcript_type "lincRNA"; transcript_name "Gm28798-201"; exon_number 2; exon_id "ENSMUSE00001334496.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049341.1"; havana_transcript "OTTMUST00000125788.1";
mm10-chrY	HAVANA	gene	28147893	28148207	.	+	.	gene_id "ENSMUSG00000100587.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28797"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049342.1";
mm10-chrY	HAVANA	transcript	28147893	28148207	.	+	.	gene_id "ENSMUSG00000100587.1"; transcript_id "ENSMUST00000188543.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28797-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049342.1"; havana_transcript "OTTMUST00000125789.1";
mm10-chrY	HAVANA	exon	28147893	28148207	.	+	.	gene_id "ENSMUSG00000100587.1"; transcript_id "ENSMUST00000188543.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28797"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28797-201"; exon_number 1; exon_id "ENSMUSE00001330046.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049342.1"; havana_transcript "OTTMUST00000125789.1";
mm10-chrY	HAVANA	gene	28184470	28185165	.	+	.	gene_id "ENSMUSG00000099828.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28796"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049343.1";
mm10-chrY	HAVANA	transcript	28184470	28185165	.	+	.	gene_id "ENSMUSG00000099828.1"; transcript_id "ENSMUST00000186905.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28796-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049343.1"; havana_transcript "OTTMUST00000125790.1";
mm10-chrY	HAVANA	exon	28184470	28185165	.	+	.	gene_id "ENSMUSG00000099828.1"; transcript_id "ENSMUST00000186905.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28796-201"; exon_number 1; exon_id "ENSMUSE00001327583.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049343.1"; havana_transcript "OTTMUST00000125790.1";
mm10-chrY	HAVANA	gene	28245352	28271512	.	-	.	gene_id "ENSMUSG00000101158.1"; gene_type "protein_coding"; gene_name "Gm20894"; level 2; havana_gene "OTTMUSG00000049410.1";
mm10-chrY	HAVANA	transcript	28245352	28271512	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	exon	28271469	28271512	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 1; exon_id "ENSMUSE00001328638.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	exon	28269972	28270103	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 2; exon_id "ENSMUSE00001323766.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	CDS	28269972	28270089	.	-	0	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 2; exon_id "ENSMUSE00001323766.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	start_codon	28270087	28270089	.	-	0	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 2; exon_id "ENSMUSE00001323766.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	exon	28264575	28264641	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 3; exon_id "ENSMUSE00001323627.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	CDS	28264575	28264641	.	-	2	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 3; exon_id "ENSMUSE00001323627.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	exon	28263923	28263957	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 4; exon_id "ENSMUSE00001335527.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	CDS	28263923	28263957	.	-	1	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 4; exon_id "ENSMUSE00001335527.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	exon	28256849	28256915	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 5; exon_id "ENSMUSE00001321915.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	CDS	28256849	28256915	.	-	2	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 5; exon_id "ENSMUSE00001321915.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	exon	28256239	28256273	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 6; exon_id "ENSMUSE00001331542.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	CDS	28256239	28256273	.	-	1	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 6; exon_id "ENSMUSE00001331542.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	exon	28248940	28249057	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 7; exon_id "ENSMUSE00001330889.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	CDS	28248940	28249057	.	-	2	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 7; exon_id "ENSMUSE00001330889.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	exon	28248074	28248173	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 8; exon_id "ENSMUSE00001320699.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	CDS	28248074	28248173	.	-	1	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 8; exon_id "ENSMUSE00001320699.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	exon	28245937	28246035	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 9; exon_id "ENSMUSE00001318018.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	CDS	28245937	28246035	.	-	0	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 9; exon_id "ENSMUSE00001318018.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	exon	28245352	28245577	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 10; exon_id "ENSMUSE00001333577.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	CDS	28245551	28245577	.	-	0	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 10; exon_id "ENSMUSE00001333577.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	stop_codon	28245548	28245550	.	-	0	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 10; exon_id "ENSMUSE00001333577.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	UTR	28271469	28271512	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 1; exon_id "ENSMUSE00001328638.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	UTR	28270090	28270103	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 2; exon_id "ENSMUSE00001323766.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	UTR	28245352	28245550	.	-	.	gene_id "ENSMUSG00000101158.1"; transcript_id "ENSMUST00000188864.1"; gene_type "protein_coding"; gene_name "Gm20894"; transcript_type "protein_coding"; transcript_name "Gm20894-201"; exon_number 10; exon_id "ENSMUSE00001333577.1"; level 2; protein_id "ENSMUSP00000141039.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049410.1"; havana_transcript "OTTMUST00000125966.1";
mm10-chrY	HAVANA	gene	28330278	28333513	.	-	.	gene_id "ENSMUSG00000099537.6"; gene_type "lincRNA"; gene_name "Gm28938"; level 2; havana_gene "OTTMUSG00000049411.1";
mm10-chrY	HAVANA	transcript	28330278	28333513	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000187029.6"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125967.1";
mm10-chrY	HAVANA	exon	28332878	28333513	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000187029.6"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-201"; exon_number 1; exon_id "ENSMUSE00001318386.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125967.1";
mm10-chrY	HAVANA	exon	28332207	28332392	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000187029.6"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-201"; exon_number 2; exon_id "ENSMUSE00001330416.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125967.1";
mm10-chrY	HAVANA	exon	28331294	28331477	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000187029.6"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-201"; exon_number 3; exon_id "ENSMUSE00001323168.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125967.1";
mm10-chrY	HAVANA	exon	28330278	28330766	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000187029.6"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-201"; exon_number 4; exon_id "ENSMUSE00001333244.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125967.1";
mm10-chrY	HAVANA	transcript	28330703	28333061	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000191129.6"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125968.1";
mm10-chrY	HAVANA	exon	28332878	28333061	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000191129.6"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-202"; exon_number 1; exon_id "ENSMUSE00001323975.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125968.1";
mm10-chrY	HAVANA	exon	28332207	28332388	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000191129.6"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-202"; exon_number 2; exon_id "ENSMUSE00001330572.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125968.1";
mm10-chrY	HAVANA	exon	28331294	28331477	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000191129.6"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-202"; exon_number 3; exon_id "ENSMUSE00001323168.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125968.1";
mm10-chrY	HAVANA	exon	28330703	28330766	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000191129.6"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-202"; exon_number 4; exon_id "ENSMUSE00001330076.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125968.1";
mm10-chrY	HAVANA	transcript	28330703	28333061	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000191487.1"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125969.1";
mm10-chrY	HAVANA	exon	28332878	28333061	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000191487.1"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-203"; exon_number 1; exon_id "ENSMUSE00001323975.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125969.1";
mm10-chrY	HAVANA	exon	28332207	28332388	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000191487.1"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-203"; exon_number 2; exon_id "ENSMUSE00001330572.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125969.1";
mm10-chrY	HAVANA	exon	28330703	28330766	.	-	.	gene_id "ENSMUSG00000099537.6"; transcript_id "ENSMUST00000191487.1"; gene_type "lincRNA"; gene_name "Gm28938"; transcript_type "lincRNA"; transcript_name "Gm28938-203"; exon_number 3; exon_id "ENSMUSE00001330076.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049411.1"; havana_transcript "OTTMUST00000125969.1";
mm10-chrY	HAVANA	gene	28377377	28378071	.	+	.	gene_id "ENSMUSG00000101669.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28937"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049412.1";
mm10-chrY	HAVANA	transcript	28377377	28378071	.	+	.	gene_id "ENSMUSG00000101669.1"; transcript_id "ENSMUST00000185413.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28937"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28937-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049412.1"; havana_transcript "OTTMUST00000125970.1";
mm10-chrY	HAVANA	exon	28377377	28378071	.	+	.	gene_id "ENSMUSG00000101669.1"; transcript_id "ENSMUST00000185413.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28937"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28937-201"; exon_number 1; exon_id "ENSMUSE00001334344.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049412.1"; havana_transcript "OTTMUST00000125970.1";
mm10-chrY	HAVANA	gene	28414211	28414825	.	+	.	gene_id "ENSMUSG00000099862.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28936"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049413.1";
mm10-chrY	HAVANA	transcript	28414211	28414825	.	+	.	gene_id "ENSMUSG00000099862.1"; transcript_id "ENSMUST00000187153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28936"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28936-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049413.1"; havana_transcript "OTTMUST00000125971.1";
mm10-chrY	HAVANA	exon	28414211	28414825	.	+	.	gene_id "ENSMUSG00000099862.1"; transcript_id "ENSMUST00000187153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28936"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28936-201"; exon_number 1; exon_id "ENSMUSE00001325775.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049413.1"; havana_transcript "OTTMUST00000125971.1";
mm10-chrY	HAVANA	gene	28443743	28444438	.	+	.	gene_id "ENSMUSG00000101908.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21642"; level 2; havana_gene "OTTMUSG00000049414.1";
mm10-chrY	HAVANA	transcript	28443743	28444438	.	+	.	gene_id "ENSMUSG00000101908.1"; transcript_id "ENSMUST00000187826.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21642"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21642-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049414.1"; havana_transcript "OTTMUST00000125972.1";
mm10-chrY	HAVANA	exon	28443743	28444438	.	+	.	gene_id "ENSMUSG00000101908.1"; transcript_id "ENSMUST00000187826.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21642"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21642-201"; exon_number 1; exon_id "ENSMUSE00001318348.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049414.1"; havana_transcript "OTTMUST00000125972.1";
mm10-chrY	HAVANA	gene	28518281	28518973	.	+	.	gene_id "ENSMUSG00000100473.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21804"; level 2; havana_gene "OTTMUSG00000049415.1";
mm10-chrY	HAVANA	transcript	28518281	28518973	.	+	.	gene_id "ENSMUSG00000100473.1"; transcript_id "ENSMUST00000190072.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21804"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21804-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049415.1"; havana_transcript "OTTMUST00000125973.1";
mm10-chrY	HAVANA	exon	28518281	28518973	.	+	.	gene_id "ENSMUSG00000100473.1"; transcript_id "ENSMUST00000190072.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21804"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21804-201"; exon_number 1; exon_id "ENSMUSE00001325394.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049415.1"; havana_transcript "OTTMUST00000125973.1";
mm10-chrY	HAVANA	gene	28624715	28627952	.	-	.	gene_id "ENSMUSG00000101192.6"; gene_type "lincRNA"; gene_name "Gm29122"; level 2; havana_gene "OTTMUSG00000049426.1";
mm10-chrY	HAVANA	transcript	28624715	28627952	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000189609.6"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126001.1";
mm10-chrY	HAVANA	exon	28627314	28627952	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000189609.6"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-203"; exon_number 1; exon_id "ENSMUSE00001320761.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126001.1";
mm10-chrY	HAVANA	exon	28626643	28626828	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000189609.6"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-203"; exon_number 2; exon_id "ENSMUSE00001334042.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126001.1";
mm10-chrY	HAVANA	exon	28625730	28625913	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000189609.6"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-203"; exon_number 3; exon_id "ENSMUSE00001322532.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126001.1";
mm10-chrY	HAVANA	exon	28624715	28625203	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000189609.6"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-203"; exon_number 4; exon_id "ENSMUSE00001327955.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126001.1";
mm10-chrY	HAVANA	transcript	28625135	28627499	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000187696.6"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126002.1";
mm10-chrY	HAVANA	exon	28627314	28627499	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000187696.6"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-201"; exon_number 1; exon_id "ENSMUSE00001323433.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126002.1";
mm10-chrY	HAVANA	exon	28626643	28626824	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000187696.6"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-201"; exon_number 2; exon_id "ENSMUSE00001331677.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126002.1";
mm10-chrY	HAVANA	exon	28625730	28625913	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000187696.6"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-201"; exon_number 3; exon_id "ENSMUSE00001322532.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126002.1";
mm10-chrY	HAVANA	exon	28625135	28625203	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000187696.6"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-201"; exon_number 4; exon_id "ENSMUSE00001319936.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126002.1";
mm10-chrY	HAVANA	transcript	28625135	28627499	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000189313.1"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126003.1";
mm10-chrY	HAVANA	exon	28627314	28627499	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000189313.1"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-202"; exon_number 1; exon_id "ENSMUSE00001323433.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126003.1";
mm10-chrY	HAVANA	exon	28626643	28626824	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000189313.1"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-202"; exon_number 2; exon_id "ENSMUSE00001331677.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126003.1";
mm10-chrY	HAVANA	exon	28625135	28625203	.	-	.	gene_id "ENSMUSG00000101192.6"; transcript_id "ENSMUST00000189313.1"; gene_type "lincRNA"; gene_name "Gm29122"; transcript_type "lincRNA"; transcript_name "Gm29122-202"; exon_number 3; exon_id "ENSMUSE00001319936.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049426.1"; havana_transcript "OTTMUST00000126003.1";
mm10-chrY	HAVANA	gene	28667432	28667746	.	+	.	gene_id "ENSMUSG00000101607.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28939"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049416.1";
mm10-chrY	HAVANA	transcript	28667432	28667746	.	+	.	gene_id "ENSMUSG00000101607.1"; transcript_id "ENSMUST00000190351.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28939"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28939-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049416.1"; havana_transcript "OTTMUST00000125974.1";
mm10-chrY	HAVANA	exon	28667432	28667746	.	+	.	gene_id "ENSMUSG00000101607.1"; transcript_id "ENSMUST00000190351.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28939"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28939-201"; exon_number 1; exon_id "ENSMUSE00001321377.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049416.1"; havana_transcript "OTTMUST00000125974.1";
mm10-chrY	HAVANA	gene	28703951	28704564	.	+	.	gene_id "ENSMUSG00000101418.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28983"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049493.1";
mm10-chrY	HAVANA	transcript	28703951	28704564	.	+	.	gene_id "ENSMUSG00000101418.1"; transcript_id "ENSMUST00000186685.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28983"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28983-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049493.1"; havana_transcript "OTTMUST00000126208.1";
mm10-chrY	HAVANA	exon	28703951	28704564	.	+	.	gene_id "ENSMUSG00000101418.1"; transcript_id "ENSMUST00000186685.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28983"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28983-201"; exon_number 1; exon_id "ENSMUSE00001329414.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049493.1"; havana_transcript "OTTMUST00000126208.1";
mm10-chrY	HAVANA	gene	28715706	28717247	.	-	.	gene_id "ENSMUSG00000099431.1"; gene_type "lincRNA"; gene_name "Gm28985"; level 2; havana_gene "OTTMUSG00000049494.1";
mm10-chrY	HAVANA	transcript	28715706	28717247	.	-	.	gene_id "ENSMUSG00000099431.1"; transcript_id "ENSMUST00000189261.1"; gene_type "lincRNA"; gene_name "Gm28985"; transcript_type "lincRNA"; transcript_name "Gm28985-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049494.1"; havana_transcript "OTTMUST00000126209.1";
mm10-chrY	HAVANA	exon	28717030	28717247	.	-	.	gene_id "ENSMUSG00000099431.1"; transcript_id "ENSMUST00000189261.1"; gene_type "lincRNA"; gene_name "Gm28985"; transcript_type "lincRNA"; transcript_name "Gm28985-201"; exon_number 1; exon_id "ENSMUSE00001326535.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049494.1"; havana_transcript "OTTMUST00000126209.1";
mm10-chrY	HAVANA	exon	28715706	28715843	.	-	.	gene_id "ENSMUSG00000099431.1"; transcript_id "ENSMUST00000189261.1"; gene_type "lincRNA"; gene_name "Gm28985"; transcript_type "lincRNA"; transcript_name "Gm28985-201"; exon_number 2; exon_id "ENSMUSE00001319988.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049494.1"; havana_transcript "OTTMUST00000126209.1";
mm10-chrY	HAVANA	gene	28733498	28734193	.	+	.	gene_id "ENSMUSG00000101837.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20810"; level 2; havana_gene "OTTMUSG00000049495.1";
mm10-chrY	HAVANA	transcript	28733498	28734193	.	+	.	gene_id "ENSMUSG00000101837.1"; transcript_id "ENSMUST00000188122.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20810"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20810-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049495.1"; havana_transcript "OTTMUST00000126210.1";
mm10-chrY	HAVANA	exon	28733498	28734193	.	+	.	gene_id "ENSMUSG00000101837.1"; transcript_id "ENSMUST00000188122.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20810"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20810-201"; exon_number 1; exon_id "ENSMUSE00001335592.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049495.1"; havana_transcript "OTTMUST00000126210.1";
mm10-chrY	HAVANA	gene	28809172	28828210	.	-	.	gene_id "ENSMUSG00000100233.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20811"; level 2; havana_gene "OTTMUSG00000049496.1";
mm10-chrY	HAVANA	transcript	28809172	28828210	.	-	.	gene_id "ENSMUSG00000100233.1"; transcript_id "ENSMUST00000190500.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20811"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20811-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049496.1"; havana_transcript "OTTMUST00000126211.1";
mm10-chrY	HAVANA	exon	28828134	28828210	.	-	.	gene_id "ENSMUSG00000100233.1"; transcript_id "ENSMUST00000190500.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20811"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20811-201"; exon_number 1; exon_id "ENSMUSE00001327045.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049496.1"; havana_transcript "OTTMUST00000126211.1";
mm10-chrY	HAVANA	exon	28827470	28827504	.	-	.	gene_id "ENSMUSG00000100233.1"; transcript_id "ENSMUST00000190500.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20811"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20811-201"; exon_number 2; exon_id "ENSMUSE00001320829.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049496.1"; havana_transcript "OTTMUST00000126211.1";
mm10-chrY	HAVANA	exon	28820395	28820461	.	-	.	gene_id "ENSMUSG00000100233.1"; transcript_id "ENSMUST00000190500.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20811"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20811-201"; exon_number 3; exon_id "ENSMUSE00001333401.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049496.1"; havana_transcript "OTTMUST00000126211.1";
mm10-chrY	HAVANA	exon	28819795	28819829	.	-	.	gene_id "ENSMUSG00000100233.1"; transcript_id "ENSMUST00000190500.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20811"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20811-201"; exon_number 4; exon_id "ENSMUSE00001323714.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049496.1"; havana_transcript "OTTMUST00000126211.1";
mm10-chrY	HAVANA	exon	28812543	28812660	.	-	.	gene_id "ENSMUSG00000100233.1"; transcript_id "ENSMUST00000190500.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20811"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20811-201"; exon_number 5; exon_id "ENSMUSE00001332178.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049496.1"; havana_transcript "OTTMUST00000126211.1";
mm10-chrY	HAVANA	exon	28811680	28811779	.	-	.	gene_id "ENSMUSG00000100233.1"; transcript_id "ENSMUST00000190500.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20811"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20811-201"; exon_number 6; exon_id "ENSMUSE00001329900.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049496.1"; havana_transcript "OTTMUST00000126211.1";
mm10-chrY	HAVANA	exon	28809555	28809651	.	-	.	gene_id "ENSMUSG00000100233.1"; transcript_id "ENSMUST00000190500.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20811"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20811-201"; exon_number 7; exon_id "ENSMUSE00001333015.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049496.1"; havana_transcript "OTTMUST00000126211.1";
mm10-chrY	HAVANA	exon	28809172	28809195	.	-	.	gene_id "ENSMUSG00000100233.1"; transcript_id "ENSMUST00000190500.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20811"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20811-201"; exon_number 8; exon_id "ENSMUSE00001321641.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049496.1"; havana_transcript "OTTMUST00000126211.1";
mm10-chrY	HAVANA	gene	28846364	28848727	.	-	.	gene_id "ENSMUSG00000100859.6"; gene_type "lincRNA"; gene_name "Gm28725"; level 2; havana_gene "OTTMUSG00000049443.1";
mm10-chrY	HAVANA	transcript	28846364	28848727	.	-	.	gene_id "ENSMUSG00000100859.6"; transcript_id "ENSMUST00000189280.6"; gene_type "lincRNA"; gene_name "Gm28725"; transcript_type "lincRNA"; transcript_name "Gm28725-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049443.1"; havana_transcript "OTTMUST00000126034.1";
mm10-chrY	HAVANA	exon	28848542	28848727	.	-	.	gene_id "ENSMUSG00000100859.6"; transcript_id "ENSMUST00000189280.6"; gene_type "lincRNA"; gene_name "Gm28725"; transcript_type "lincRNA"; transcript_name "Gm28725-202"; exon_number 1; exon_id "ENSMUSE00001320568.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049443.1"; havana_transcript "OTTMUST00000126034.1";
mm10-chrY	HAVANA	exon	28847873	28848054	.	-	.	gene_id "ENSMUSG00000100859.6"; transcript_id "ENSMUST00000189280.6"; gene_type "lincRNA"; gene_name "Gm28725"; transcript_type "lincRNA"; transcript_name "Gm28725-202"; exon_number 2; exon_id "ENSMUSE00001326298.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049443.1"; havana_transcript "OTTMUST00000126034.1";
mm10-chrY	HAVANA	exon	28846364	28846432	.	-	.	gene_id "ENSMUSG00000100859.6"; transcript_id "ENSMUST00000189280.6"; gene_type "lincRNA"; gene_name "Gm28725"; transcript_type "lincRNA"; transcript_name "Gm28725-202"; exon_number 3; exon_id "ENSMUSE00001333243.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049443.1"; havana_transcript "OTTMUST00000126034.1";
mm10-chrY	HAVANA	transcript	28846364	28848727	.	-	.	gene_id "ENSMUSG00000100859.6"; transcript_id "ENSMUST00000187372.1"; gene_type "lincRNA"; gene_name "Gm28725"; transcript_type "lincRNA"; transcript_name "Gm28725-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049443.1"; havana_transcript "OTTMUST00000126035.1";
mm10-chrY	HAVANA	exon	28848542	28848727	.	-	.	gene_id "ENSMUSG00000100859.6"; transcript_id "ENSMUST00000187372.1"; gene_type "lincRNA"; gene_name "Gm28725"; transcript_type "lincRNA"; transcript_name "Gm28725-201"; exon_number 1; exon_id "ENSMUSE00001320568.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049443.1"; havana_transcript "OTTMUST00000126035.1";
mm10-chrY	HAVANA	exon	28847873	28848054	.	-	.	gene_id "ENSMUSG00000100859.6"; transcript_id "ENSMUST00000187372.1"; gene_type "lincRNA"; gene_name "Gm28725"; transcript_type "lincRNA"; transcript_name "Gm28725-201"; exon_number 2; exon_id "ENSMUSE00001326298.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049443.1"; havana_transcript "OTTMUST00000126035.1";
mm10-chrY	HAVANA	exon	28846961	28847145	.	-	.	gene_id "ENSMUSG00000100859.6"; transcript_id "ENSMUST00000187372.1"; gene_type "lincRNA"; gene_name "Gm28725"; transcript_type "lincRNA"; transcript_name "Gm28725-201"; exon_number 3; exon_id "ENSMUSE00001322412.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049443.1"; havana_transcript "OTTMUST00000126035.1";
mm10-chrY	HAVANA	exon	28846364	28846432	.	-	.	gene_id "ENSMUSG00000100859.6"; transcript_id "ENSMUST00000187372.1"; gene_type "lincRNA"; gene_name "Gm28725"; transcript_type "lincRNA"; transcript_name "Gm28725-201"; exon_number 4; exon_id "ENSMUSE00001333243.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049443.1"; havana_transcript "OTTMUST00000126035.1";
mm10-chrY	HAVANA	gene	28871184	28871711	.	-	.	gene_id "ENSMUSG00000099653.1"; gene_type "lincRNA"; gene_name "Gm28984"; level 2; havana_gene "OTTMUSG00000049497.1";
mm10-chrY	HAVANA	transcript	28871184	28871711	.	-	.	gene_id "ENSMUSG00000099653.1"; transcript_id "ENSMUST00000188202.1"; gene_type "lincRNA"; gene_name "Gm28984"; transcript_type "lincRNA"; transcript_name "Gm28984-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049497.1"; havana_transcript "OTTMUST00000126212.1";
mm10-chrY	HAVANA	exon	28871607	28871711	.	-	.	gene_id "ENSMUSG00000099653.1"; transcript_id "ENSMUST00000188202.1"; gene_type "lincRNA"; gene_name "Gm28984"; transcript_type "lincRNA"; transcript_name "Gm28984-201"; exon_number 1; exon_id "ENSMUSE00001331706.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049497.1"; havana_transcript "OTTMUST00000126212.1";
mm10-chrY	HAVANA	exon	28871184	28871252	.	-	.	gene_id "ENSMUSG00000099653.1"; transcript_id "ENSMUST00000188202.1"; gene_type "lincRNA"; gene_name "Gm28984"; transcript_type "lincRNA"; transcript_name "Gm28984-201"; exon_number 2; exon_id "ENSMUSE00001333357.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049497.1"; havana_transcript "OTTMUST00000126212.1";
mm10-chrY	HAVANA	gene	28908997	28911276	.	-	.	gene_id "ENSMUSG00000100875.6"; gene_type "lincRNA"; gene_name "Gm28987"; level 2; havana_gene "OTTMUSG00000049498.1";
mm10-chrY	HAVANA	transcript	28908997	28911276	.	-	.	gene_id "ENSMUSG00000100875.6"; transcript_id "ENSMUST00000191071.6"; gene_type "lincRNA"; gene_name "Gm28987"; transcript_type "lincRNA"; transcript_name "Gm28987-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049498.1"; havana_transcript "OTTMUST00000126213.1";
mm10-chrY	HAVANA	exon	28911176	28911276	.	-	.	gene_id "ENSMUSG00000100875.6"; transcript_id "ENSMUST00000191071.6"; gene_type "lincRNA"; gene_name "Gm28987"; transcript_type "lincRNA"; transcript_name "Gm28987-201"; exon_number 1; exon_id "ENSMUSE00001336072.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049498.1"; havana_transcript "OTTMUST00000126213.1";
mm10-chrY	HAVANA	exon	28910507	28910688	.	-	.	gene_id "ENSMUSG00000100875.6"; transcript_id "ENSMUST00000191071.6"; gene_type "lincRNA"; gene_name "Gm28987"; transcript_type "lincRNA"; transcript_name "Gm28987-201"; exon_number 2; exon_id "ENSMUSE00001324132.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049498.1"; havana_transcript "OTTMUST00000126213.1";
mm10-chrY	HAVANA	exon	28909594	28909778	.	-	.	gene_id "ENSMUSG00000100875.6"; transcript_id "ENSMUST00000191071.6"; gene_type "lincRNA"; gene_name "Gm28987"; transcript_type "lincRNA"; transcript_name "Gm28987-201"; exon_number 3; exon_id "ENSMUSE00001323430.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049498.1"; havana_transcript "OTTMUST00000126213.1";
mm10-chrY	HAVANA	exon	28908997	28909065	.	-	.	gene_id "ENSMUSG00000100875.6"; transcript_id "ENSMUST00000191071.6"; gene_type "lincRNA"; gene_name "Gm28987"; transcript_type "lincRNA"; transcript_name "Gm28987-201"; exon_number 4; exon_id "ENSMUSE00001319121.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049498.1"; havana_transcript "OTTMUST00000126213.1";
mm10-chrY	HAVANA	transcript	28908997	28911276	.	-	.	gene_id "ENSMUSG00000100875.6"; transcript_id "ENSMUST00000191374.1"; gene_type "lincRNA"; gene_name "Gm28987"; transcript_type "lincRNA"; transcript_name "Gm28987-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049498.1"; havana_transcript "OTTMUST00000126214.1";
mm10-chrY	HAVANA	exon	28911176	28911276	.	-	.	gene_id "ENSMUSG00000100875.6"; transcript_id "ENSMUST00000191374.1"; gene_type "lincRNA"; gene_name "Gm28987"; transcript_type "lincRNA"; transcript_name "Gm28987-202"; exon_number 1; exon_id "ENSMUSE00001336072.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049498.1"; havana_transcript "OTTMUST00000126214.1";
mm10-chrY	HAVANA	exon	28910507	28910688	.	-	.	gene_id "ENSMUSG00000100875.6"; transcript_id "ENSMUST00000191374.1"; gene_type "lincRNA"; gene_name "Gm28987"; transcript_type "lincRNA"; transcript_name "Gm28987-202"; exon_number 2; exon_id "ENSMUSE00001324132.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049498.1"; havana_transcript "OTTMUST00000126214.1";
mm10-chrY	HAVANA	exon	28908997	28909065	.	-	.	gene_id "ENSMUSG00000100875.6"; transcript_id "ENSMUST00000191374.1"; gene_type "lincRNA"; gene_name "Gm28987"; transcript_type "lincRNA"; transcript_name "Gm28987-202"; exon_number 3; exon_id "ENSMUSE00001319121.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049498.1"; havana_transcript "OTTMUST00000126214.1";
mm10-chrY	HAVANA	gene	28994508	28995633	.	+	.	gene_id "ENSMUSG00000100117.1"; gene_type "lincRNA"; gene_name "Gm28986"; level 2; havana_gene "OTTMUSG00000049499.1";
mm10-chrY	HAVANA	transcript	28994508	28995633	.	+	.	gene_id "ENSMUSG00000100117.1"; transcript_id "ENSMUST00000189682.1"; gene_type "lincRNA"; gene_name "Gm28986"; transcript_type "lincRNA"; transcript_name "Gm28986-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049499.1"; havana_transcript "OTTMUST00000126215.1";
mm10-chrY	HAVANA	exon	28994508	28994744	.	+	.	gene_id "ENSMUSG00000100117.1"; transcript_id "ENSMUST00000189682.1"; gene_type "lincRNA"; gene_name "Gm28986"; transcript_type "lincRNA"; transcript_name "Gm28986-201"; exon_number 1; exon_id "ENSMUSE00001331876.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049499.1"; havana_transcript "OTTMUST00000126215.1";
mm10-chrY	HAVANA	exon	28995193	28995633	.	+	.	gene_id "ENSMUSG00000100117.1"; transcript_id "ENSMUST00000189682.1"; gene_type "lincRNA"; gene_name "Gm28986"; transcript_type "lincRNA"; transcript_name "Gm28986-201"; exon_number 2; exon_id "ENSMUSE00001323645.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049499.1"; havana_transcript "OTTMUST00000126215.1";
mm10-chrY	HAVANA	gene	29089683	29090168	.	-	.	gene_id "ENSMUSG00000101305.1"; gene_type "processed_pseudogene"; gene_name "Gm29171"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049329.1";
mm10-chrY	HAVANA	transcript	29089683	29090168	.	-	.	gene_id "ENSMUSG00000101305.1"; transcript_id "ENSMUST00000191397.1"; gene_type "processed_pseudogene"; gene_name "Gm29171"; transcript_type "processed_pseudogene"; transcript_name "Gm29171-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049329.1"; havana_transcript "OTTMUST00000125765.1";
mm10-chrY	HAVANA	exon	29089683	29090168	.	-	.	gene_id "ENSMUSG00000101305.1"; transcript_id "ENSMUST00000191397.1"; gene_type "processed_pseudogene"; gene_name "Gm29171"; transcript_type "processed_pseudogene"; transcript_name "Gm29171-201"; exon_number 1; exon_id "ENSMUSE00001330702.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049329.1"; havana_transcript "OTTMUST00000125765.1";
mm10-chrY	HAVANA	gene	29156796	29159075	.	+	.	gene_id "ENSMUSG00000099650.6"; gene_type "lincRNA"; gene_name "Gm28129"; level 2; havana_gene "OTTMUSG00000049330.1";
mm10-chrY	HAVANA	transcript	29156796	29159075	.	+	.	gene_id "ENSMUSG00000099650.6"; transcript_id "ENSMUST00000186273.6"; gene_type "lincRNA"; gene_name "Gm28129"; transcript_type "lincRNA"; transcript_name "Gm28129-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049330.1"; havana_transcript "OTTMUST00000125766.1";
mm10-chrY	HAVANA	exon	29156796	29156896	.	+	.	gene_id "ENSMUSG00000099650.6"; transcript_id "ENSMUST00000186273.6"; gene_type "lincRNA"; gene_name "Gm28129"; transcript_type "lincRNA"; transcript_name "Gm28129-201"; exon_number 1; exon_id "ENSMUSE00001319025.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049330.1"; havana_transcript "OTTMUST00000125766.1";
mm10-chrY	HAVANA	exon	29157384	29157565	.	+	.	gene_id "ENSMUSG00000099650.6"; transcript_id "ENSMUST00000186273.6"; gene_type "lincRNA"; gene_name "Gm28129"; transcript_type "lincRNA"; transcript_name "Gm28129-201"; exon_number 2; exon_id "ENSMUSE00001331747.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049330.1"; havana_transcript "OTTMUST00000125766.1";
mm10-chrY	HAVANA	exon	29158294	29158478	.	+	.	gene_id "ENSMUSG00000099650.6"; transcript_id "ENSMUST00000186273.6"; gene_type "lincRNA"; gene_name "Gm28129"; transcript_type "lincRNA"; transcript_name "Gm28129-201"; exon_number 3; exon_id "ENSMUSE00001320571.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049330.1"; havana_transcript "OTTMUST00000125766.1";
mm10-chrY	HAVANA	exon	29159007	29159075	.	+	.	gene_id "ENSMUSG00000099650.6"; transcript_id "ENSMUST00000186273.6"; gene_type "lincRNA"; gene_name "Gm28129"; transcript_type "lincRNA"; transcript_name "Gm28129-201"; exon_number 4; exon_id "ENSMUSE00001325079.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049330.1"; havana_transcript "OTTMUST00000125766.1";
mm10-chrY	HAVANA	transcript	29156796	29159075	.	+	.	gene_id "ENSMUSG00000099650.6"; transcript_id "ENSMUST00000187670.1"; gene_type "lincRNA"; gene_name "Gm28129"; transcript_type "lincRNA"; transcript_name "Gm28129-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049330.1"; havana_transcript "OTTMUST00000125767.1";
mm10-chrY	HAVANA	exon	29156796	29156896	.	+	.	gene_id "ENSMUSG00000099650.6"; transcript_id "ENSMUST00000187670.1"; gene_type "lincRNA"; gene_name "Gm28129"; transcript_type "lincRNA"; transcript_name "Gm28129-202"; exon_number 1; exon_id "ENSMUSE00001319025.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049330.1"; havana_transcript "OTTMUST00000125767.1";
mm10-chrY	HAVANA	exon	29157384	29157565	.	+	.	gene_id "ENSMUSG00000099650.6"; transcript_id "ENSMUST00000187670.1"; gene_type "lincRNA"; gene_name "Gm28129"; transcript_type "lincRNA"; transcript_name "Gm28129-202"; exon_number 2; exon_id "ENSMUSE00001331747.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049330.1"; havana_transcript "OTTMUST00000125767.1";
mm10-chrY	HAVANA	exon	29159007	29159075	.	+	.	gene_id "ENSMUSG00000099650.6"; transcript_id "ENSMUST00000187670.1"; gene_type "lincRNA"; gene_name "Gm28129"; transcript_type "lincRNA"; transcript_name "Gm28129-202"; exon_number 3; exon_id "ENSMUSE00001325079.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049330.1"; havana_transcript "OTTMUST00000125767.1";
mm10-chrY	HAVANA	gene	29219692	29222056	.	+	.	gene_id "ENSMUSG00000101560.6"; gene_type "lincRNA"; gene_name "Gm28127"; level 2; havana_gene "OTTMUSG00000049332.1";
mm10-chrY	HAVANA	transcript	29219692	29222056	.	+	.	gene_id "ENSMUSG00000101560.6"; transcript_id "ENSMUST00000185293.6"; gene_type "lincRNA"; gene_name "Gm28127"; transcript_type "lincRNA"; transcript_name "Gm28127-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049332.1"; havana_transcript "OTTMUST00000125769.1";
mm10-chrY	HAVANA	exon	29219692	29219877	.	+	.	gene_id "ENSMUSG00000101560.6"; transcript_id "ENSMUST00000185293.6"; gene_type "lincRNA"; gene_name "Gm28127"; transcript_type "lincRNA"; transcript_name "Gm28127-201"; exon_number 1; exon_id "ENSMUSE00001324468.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049332.1"; havana_transcript "OTTMUST00000125769.1";
mm10-chrY	HAVANA	exon	29220365	29220546	.	+	.	gene_id "ENSMUSG00000101560.6"; transcript_id "ENSMUST00000185293.6"; gene_type "lincRNA"; gene_name "Gm28127"; transcript_type "lincRNA"; transcript_name "Gm28127-201"; exon_number 2; exon_id "ENSMUSE00001334443.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049332.1"; havana_transcript "OTTMUST00000125769.1";
mm10-chrY	HAVANA	exon	29221275	29221459	.	+	.	gene_id "ENSMUSG00000101560.6"; transcript_id "ENSMUST00000185293.6"; gene_type "lincRNA"; gene_name "Gm28127"; transcript_type "lincRNA"; transcript_name "Gm28127-201"; exon_number 3; exon_id "ENSMUSE00001327342.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049332.1"; havana_transcript "OTTMUST00000125769.1";
mm10-chrY	HAVANA	exon	29221988	29222056	.	+	.	gene_id "ENSMUSG00000101560.6"; transcript_id "ENSMUST00000185293.6"; gene_type "lincRNA"; gene_name "Gm28127"; transcript_type "lincRNA"; transcript_name "Gm28127-201"; exon_number 4; exon_id "ENSMUSE00001319728.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049332.1"; havana_transcript "OTTMUST00000125769.1";
mm10-chrY	HAVANA	transcript	29219692	29222056	.	+	.	gene_id "ENSMUSG00000101560.6"; transcript_id "ENSMUST00000190634.1"; gene_type "lincRNA"; gene_name "Gm28127"; transcript_type "lincRNA"; transcript_name "Gm28127-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049332.1"; havana_transcript "OTTMUST00000125770.1";
mm10-chrY	HAVANA	exon	29219692	29219877	.	+	.	gene_id "ENSMUSG00000101560.6"; transcript_id "ENSMUST00000190634.1"; gene_type "lincRNA"; gene_name "Gm28127"; transcript_type "lincRNA"; transcript_name "Gm28127-202"; exon_number 1; exon_id "ENSMUSE00001324468.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049332.1"; havana_transcript "OTTMUST00000125770.1";
mm10-chrY	HAVANA	exon	29220365	29220546	.	+	.	gene_id "ENSMUSG00000101560.6"; transcript_id "ENSMUST00000190634.1"; gene_type "lincRNA"; gene_name "Gm28127"; transcript_type "lincRNA"; transcript_name "Gm28127-202"; exon_number 2; exon_id "ENSMUSE00001334443.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049332.1"; havana_transcript "OTTMUST00000125770.1";
mm10-chrY	HAVANA	exon	29221988	29222056	.	+	.	gene_id "ENSMUSG00000101560.6"; transcript_id "ENSMUST00000190634.1"; gene_type "lincRNA"; gene_name "Gm28127"; transcript_type "lincRNA"; transcript_name "Gm28127-202"; exon_number 3; exon_id "ENSMUSE00001319728.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049332.1"; havana_transcript "OTTMUST00000125770.1";
mm10-chrY	HAVANA	gene	29263852	29264379	.	+	.	gene_id "ENSMUSG00000101954.1"; gene_type "lincRNA"; gene_name "Gm28128"; level 2; havana_gene "OTTMUSG00000049333.1";
mm10-chrY	HAVANA	transcript	29263852	29264379	.	+	.	gene_id "ENSMUSG00000101954.1"; transcript_id "ENSMUST00000187403.1"; gene_type "lincRNA"; gene_name "Gm28128"; transcript_type "lincRNA"; transcript_name "Gm28128-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049333.1"; havana_transcript "OTTMUST00000125771.1";
mm10-chrY	HAVANA	exon	29263852	29263956	.	+	.	gene_id "ENSMUSG00000101954.1"; transcript_id "ENSMUST00000187403.1"; gene_type "lincRNA"; gene_name "Gm28128"; transcript_type "lincRNA"; transcript_name "Gm28128-201"; exon_number 1; exon_id "ENSMUSE00001328260.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049333.1"; havana_transcript "OTTMUST00000125771.1";
mm10-chrY	HAVANA	exon	29264311	29264379	.	+	.	gene_id "ENSMUSG00000101954.1"; transcript_id "ENSMUST00000187403.1"; gene_type "lincRNA"; gene_name "Gm28128"; transcript_type "lincRNA"; transcript_name "Gm28128-201"; exon_number 2; exon_id "ENSMUSE00001332537.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049333.1"; havana_transcript "OTTMUST00000125771.1";
mm10-chrY	HAVANA	gene	29351836	29376221	.	+	.	gene_id "ENSMUSG00000096538.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21853"; level 2; havana_gene "OTTMUSG00000049334.1";
mm10-chrY	HAVANA	transcript	29351836	29376221	.	+	.	gene_id "ENSMUSG00000096538.2"; transcript_id "ENSMUST00000180071.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21853-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049334.1"; havana_transcript "OTTMUST00000125772.1";
mm10-chrY	HAVANA	exon	29351836	29351953	.	+	.	gene_id "ENSMUSG00000096538.2"; transcript_id "ENSMUST00000180071.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21853-201"; exon_number 1; exon_id "ENSMUSE00001065456.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049334.1"; havana_transcript "OTTMUST00000125772.1";
mm10-chrY	HAVANA	exon	29357262	29357328	.	+	.	gene_id "ENSMUSG00000096538.2"; transcript_id "ENSMUST00000180071.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21853-201"; exon_number 2; exon_id "ENSMUSE00000963647.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049334.1"; havana_transcript "OTTMUST00000125772.1";
mm10-chrY	HAVANA	exon	29357884	29357918	.	+	.	gene_id "ENSMUSG00000096538.2"; transcript_id "ENSMUST00000180071.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21853-201"; exon_number 3; exon_id "ENSMUSE00001031443.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049334.1"; havana_transcript "OTTMUST00000125772.1";
mm10-chrY	HAVANA	exon	29364907	29364973	.	+	.	gene_id "ENSMUSG00000096538.2"; transcript_id "ENSMUST00000180071.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21853-201"; exon_number 4; exon_id "ENSMUSE00001069940.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049334.1"; havana_transcript "OTTMUST00000125772.1";
mm10-chrY	HAVANA	exon	29365533	29365567	.	+	.	gene_id "ENSMUSG00000096538.2"; transcript_id "ENSMUST00000180071.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21853-201"; exon_number 5; exon_id "ENSMUSE00001019613.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049334.1"; havana_transcript "OTTMUST00000125772.1";
mm10-chrY	HAVANA	exon	29372731	29372848	.	+	.	gene_id "ENSMUSG00000096538.2"; transcript_id "ENSMUST00000180071.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21853-201"; exon_number 6; exon_id "ENSMUSE00001033433.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049334.1"; havana_transcript "OTTMUST00000125772.1";
mm10-chrY	HAVANA	exon	29373610	29373709	.	+	.	gene_id "ENSMUSG00000096538.2"; transcript_id "ENSMUST00000180071.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21853-201"; exon_number 7; exon_id "ENSMUSE00001016305.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049334.1"; havana_transcript "OTTMUST00000125772.1";
mm10-chrY	HAVANA	exon	29375739	29375835	.	+	.	gene_id "ENSMUSG00000096538.2"; transcript_id "ENSMUST00000180071.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21853-201"; exon_number 8; exon_id "ENSMUSE00001319835.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049334.1"; havana_transcript "OTTMUST00000125772.1";
mm10-chrY	HAVANA	exon	29376195	29376221	.	+	.	gene_id "ENSMUSG00000096538.2"; transcript_id "ENSMUST00000180071.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21853-201"; exon_number 9; exon_id "ENSMUSE00001319533.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049334.1"; havana_transcript "OTTMUST00000125772.1";
mm10-chrY	HAVANA	gene	29395248	29395694	.	+	.	gene_id "ENSMUSG00000099348.1"; gene_type "lincRNA"; gene_name "Gm28132"; level 2; havana_gene "OTTMUSG00000049335.1";
mm10-chrY	HAVANA	transcript	29395248	29395694	.	+	.	gene_id "ENSMUSG00000099348.1"; transcript_id "ENSMUST00000189901.1"; gene_type "lincRNA"; gene_name "Gm28132"; transcript_type "lincRNA"; transcript_name "Gm28132-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049335.1"; havana_transcript "OTTMUST00000125775.1";
mm10-chrY	HAVANA	exon	29395248	29395352	.	+	.	gene_id "ENSMUSG00000099348.1"; transcript_id "ENSMUST00000189901.1"; gene_type "lincRNA"; gene_name "Gm28132"; transcript_type "lincRNA"; transcript_name "Gm28132-201"; exon_number 1; exon_id "ENSMUSE00001326896.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049335.1"; havana_transcript "OTTMUST00000125775.1";
mm10-chrY	HAVANA	exon	29395634	29395694	.	+	.	gene_id "ENSMUSG00000099348.1"; transcript_id "ENSMUST00000189901.1"; gene_type "lincRNA"; gene_name "Gm28132"; transcript_type "lincRNA"; transcript_name "Gm28132-201"; exon_number 2; exon_id "ENSMUSE00001331534.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049335.1"; havana_transcript "OTTMUST00000125775.1";
mm10-chrY	HAVANA	gene	29558660	29561895	.	-	.	gene_id "ENSMUSG00000099380.6"; gene_type "lincRNA"; gene_name "Gm28130"; level 2; havana_gene "OTTMUSG00000049336.1";
mm10-chrY	HAVANA	transcript	29558660	29561895	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000186321.6"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125776.1";
mm10-chrY	HAVANA	exon	29561258	29561895	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000186321.6"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-201"; exon_number 1; exon_id "ENSMUSE00001321771.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125776.1";
mm10-chrY	HAVANA	exon	29560589	29560774	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000186321.6"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-201"; exon_number 2; exon_id "ENSMUSE00001333397.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125776.1";
mm10-chrY	HAVANA	exon	29559678	29559861	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000186321.6"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-201"; exon_number 3; exon_id "ENSMUSE00001329496.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125776.1";
mm10-chrY	HAVANA	exon	29558660	29559149	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000186321.6"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-201"; exon_number 4; exon_id "ENSMUSE00001321729.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125776.1";
mm10-chrY	HAVANA	transcript	29559081	29561443	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000187335.6"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125777.1";
mm10-chrY	HAVANA	exon	29561258	29561443	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000187335.6"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-202"; exon_number 1; exon_id "ENSMUSE00001318249.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125777.1";
mm10-chrY	HAVANA	exon	29560589	29560770	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000187335.6"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-202"; exon_number 2; exon_id "ENSMUSE00001324913.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125777.1";
mm10-chrY	HAVANA	exon	29559678	29559861	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000187335.6"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-202"; exon_number 3; exon_id "ENSMUSE00001329496.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125777.1";
mm10-chrY	HAVANA	exon	29559081	29559149	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000187335.6"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-202"; exon_number 4; exon_id "ENSMUSE00001333541.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125777.1";
mm10-chrY	HAVANA	transcript	29559081	29561443	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000187950.1"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125778.1";
mm10-chrY	HAVANA	exon	29561258	29561443	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000187950.1"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-203"; exon_number 1; exon_id "ENSMUSE00001318249.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125778.1";
mm10-chrY	HAVANA	exon	29560589	29560770	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000187950.1"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-203"; exon_number 2; exon_id "ENSMUSE00001324913.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125778.1";
mm10-chrY	HAVANA	exon	29559081	29559149	.	-	.	gene_id "ENSMUSG00000099380.6"; transcript_id "ENSMUST00000187950.1"; gene_type "lincRNA"; gene_name "Gm28130"; transcript_type "lincRNA"; transcript_name "Gm28130-203"; exon_number 3; exon_id "ENSMUSE00001333541.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049336.1"; havana_transcript "OTTMUST00000125778.1";
mm10-chrY	HAVANA	gene	29587678	29590910	.	-	.	gene_id "ENSMUSG00000101412.6"; gene_type "lincRNA"; gene_name "Gm28131"; level 2; havana_gene "OTTMUSG00000049337.1";
mm10-chrY	HAVANA	transcript	29587678	29590910	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000187841.6"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-203"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125779.1";
mm10-chrY	HAVANA	exon	29590272	29590910	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000187841.6"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-203"; exon_number 1; exon_id "ENSMUSE00001326726.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125779.1";
mm10-chrY	HAVANA	exon	29589605	29589787	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000187841.6"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-203"; exon_number 2; exon_id "ENSMUSE00001322769.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125779.1";
mm10-chrY	HAVANA	exon	29588695	29588875	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000187841.6"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-203"; exon_number 3; exon_id "ENSMUSE00001319908.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125779.1";
mm10-chrY	HAVANA	exon	29587678	29588167	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000187841.6"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-203"; exon_number 4; exon_id "ENSMUSE00001324639.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125779.1";
mm10-chrY	HAVANA	transcript	29588099	29590457	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000186893.6"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125780.1";
mm10-chrY	HAVANA	exon	29590272	29590457	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000186893.6"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-201"; exon_number 1; exon_id "ENSMUSE00001328882.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125780.1";
mm10-chrY	HAVANA	exon	29589605	29589783	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000186893.6"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-201"; exon_number 2; exon_id "ENSMUSE00001331348.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125780.1";
mm10-chrY	HAVANA	exon	29588695	29588875	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000186893.6"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-201"; exon_number 3; exon_id "ENSMUSE00001319908.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125780.1";
mm10-chrY	HAVANA	exon	29588099	29588167	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000186893.6"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-201"; exon_number 4; exon_id "ENSMUSE00001333508.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125780.1";
mm10-chrY	HAVANA	transcript	29588099	29590457	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000187050.1"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125781.1";
mm10-chrY	HAVANA	exon	29590272	29590457	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000187050.1"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-202"; exon_number 1; exon_id "ENSMUSE00001328882.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125781.1";
mm10-chrY	HAVANA	exon	29589605	29589783	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000187050.1"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-202"; exon_number 2; exon_id "ENSMUSE00001331348.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125781.1";
mm10-chrY	HAVANA	exon	29588099	29588167	.	-	.	gene_id "ENSMUSG00000101412.6"; transcript_id "ENSMUST00000187050.1"; gene_type "lincRNA"; gene_name "Gm28131"; transcript_type "lincRNA"; transcript_name "Gm28131-202"; exon_number 3; exon_id "ENSMUSE00001333508.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049337.1"; havana_transcript "OTTMUST00000125781.1";
mm10-chrY	ENSEMBL	gene	29655497	29683370	.	-	.	gene_id "ENSMUSG00000094869.1"; gene_type "protein_coding"; gene_name "Gm21679"; level 3;
mm10-chrY	ENSEMBL	transcript	29655497	29683370	.	-	.	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	29683262	29683370	.	-	.	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 1; exon_id "ENSMUSE00001084960.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	29683262	29683370	.	-	0	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 1; exon_id "ENSMUSE00001084960.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	29683368	29683370	.	-	0	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 1; exon_id "ENSMUSE00001084960.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	29671839	29671905	.	-	.	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 2; exon_id "ENSMUSE00000986932.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	29671839	29671905	.	-	2	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 2; exon_id "ENSMUSE00000986932.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	29671256	29671290	.	-	.	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 3; exon_id "ENSMUSE00001005216.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	29671256	29671290	.	-	1	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 3; exon_id "ENSMUSE00001005216.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	29664170	29664236	.	-	.	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 4; exon_id "ENSMUSE00000981205.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	29664170	29664236	.	-	2	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 4; exon_id "ENSMUSE00000981205.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	29663574	29663608	.	-	.	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 5; exon_id "ENSMUSE00001085229.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	29663574	29663608	.	-	1	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 5; exon_id "ENSMUSE00001085229.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	29656317	29656434	.	-	.	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 6; exon_id "ENSMUSE00001025231.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	29656317	29656434	.	-	2	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 6; exon_id "ENSMUSE00001025231.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	29655497	29655563	.	-	.	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 7; exon_id "ENSMUSE00000999121.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	29655497	29655563	.	-	1	gene_id "ENSMUSG00000094869.1"; transcript_id "ENSMUST00000180373.1"; gene_type "protein_coding"; gene_name "Gm21679"; transcript_type "protein_coding"; transcript_name "Gm21679-201"; exon_number 7; exon_id "ENSMUSE00000999121.1"; level 3; protein_id "ENSMUSP00000136773.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	30097200	30097895	.	-	.	gene_id "ENSMUSG00000099817.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29317"; level 2; havana_gene "OTTMUSG00000049252.1";
mm10-chrY	HAVANA	transcript	30097200	30097895	.	-	.	gene_id "ENSMUSG00000099817.1"; transcript_id "ENSMUST00000188216.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29317"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29317-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049252.1"; havana_transcript "OTTMUST00000125609.1";
mm10-chrY	HAVANA	exon	30097200	30097895	.	-	.	gene_id "ENSMUSG00000099817.1"; transcript_id "ENSMUST00000188216.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29317"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29317-201"; exon_number 1; exon_id "ENSMUSE00001328412.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049252.1"; havana_transcript "OTTMUST00000125609.1";
mm10-chrY	HAVANA	gene	30132603	30133130	.	+	.	gene_id "ENSMUSG00000099880.1"; gene_type "lincRNA"; gene_name "Gm29316"; level 2; havana_gene "OTTMUSG00000049253.1";
mm10-chrY	HAVANA	transcript	30132603	30133130	.	+	.	gene_id "ENSMUSG00000099880.1"; transcript_id "ENSMUST00000190953.1"; gene_type "lincRNA"; gene_name "Gm29316"; transcript_type "lincRNA"; transcript_name "Gm29316-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049253.1"; havana_transcript "OTTMUST00000125610.1";
mm10-chrY	HAVANA	exon	30132603	30132707	.	+	.	gene_id "ENSMUSG00000099880.1"; transcript_id "ENSMUST00000190953.1"; gene_type "lincRNA"; gene_name "Gm29316"; transcript_type "lincRNA"; transcript_name "Gm29316-201"; exon_number 1; exon_id "ENSMUSE00001332018.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049253.1"; havana_transcript "OTTMUST00000125610.1";
mm10-chrY	HAVANA	exon	30133062	30133130	.	+	.	gene_id "ENSMUSG00000099880.1"; transcript_id "ENSMUST00000190953.1"; gene_type "lincRNA"; gene_name "Gm29316"; transcript_type "lincRNA"; transcript_name "Gm29316-201"; exon_number 2; exon_id "ENSMUSE00001323274.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049253.1"; havana_transcript "OTTMUST00000125610.1";
mm10-chrY	HAVANA	gene	30155238	30157598	.	+	.	gene_id "ENSMUSG00000101642.6"; gene_type "lincRNA"; gene_name "Gm29315"; level 2; havana_gene "OTTMUSG00000049254.1";
mm10-chrY	HAVANA	transcript	30155238	30157598	.	+	.	gene_id "ENSMUSG00000101642.6"; transcript_id "ENSMUST00000185844.6"; gene_type "lincRNA"; gene_name "Gm29315"; transcript_type "lincRNA"; transcript_name "Gm29315-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049254.1"; havana_transcript "OTTMUST00000125611.1";
mm10-chrY	HAVANA	exon	30155238	30155423	.	+	.	gene_id "ENSMUSG00000101642.6"; transcript_id "ENSMUST00000185844.6"; gene_type "lincRNA"; gene_name "Gm29315"; transcript_type "lincRNA"; transcript_name "Gm29315-201"; exon_number 1; exon_id "ENSMUSE00001326352.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049254.1"; havana_transcript "OTTMUST00000125611.1";
mm10-chrY	HAVANA	exon	30155911	30156092	.	+	.	gene_id "ENSMUSG00000101642.6"; transcript_id "ENSMUST00000185844.6"; gene_type "lincRNA"; gene_name "Gm29315"; transcript_type "lincRNA"; transcript_name "Gm29315-201"; exon_number 2; exon_id "ENSMUSE00001328936.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049254.1"; havana_transcript "OTTMUST00000125611.1";
mm10-chrY	HAVANA	exon	30156821	30157005	.	+	.	gene_id "ENSMUSG00000101642.6"; transcript_id "ENSMUST00000185844.6"; gene_type "lincRNA"; gene_name "Gm29315"; transcript_type "lincRNA"; transcript_name "Gm29315-201"; exon_number 3; exon_id "ENSMUSE00001324829.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049254.1"; havana_transcript "OTTMUST00000125611.1";
mm10-chrY	HAVANA	exon	30157530	30157598	.	+	.	gene_id "ENSMUSG00000101642.6"; transcript_id "ENSMUST00000185844.6"; gene_type "lincRNA"; gene_name "Gm29315"; transcript_type "lincRNA"; transcript_name "Gm29315-201"; exon_number 4; exon_id "ENSMUSE00001330671.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049254.1"; havana_transcript "OTTMUST00000125611.1";
mm10-chrY	HAVANA	transcript	30155238	30157598	.	+	.	gene_id "ENSMUSG00000101642.6"; transcript_id "ENSMUST00000190162.1"; gene_type "lincRNA"; gene_name "Gm29315"; transcript_type "lincRNA"; transcript_name "Gm29315-202"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000049254.1"; havana_transcript "OTTMUST00000125612.1";
mm10-chrY	HAVANA	exon	30155238	30155423	.	+	.	gene_id "ENSMUSG00000101642.6"; transcript_id "ENSMUST00000190162.1"; gene_type "lincRNA"; gene_name "Gm29315"; transcript_type "lincRNA"; transcript_name "Gm29315-202"; exon_number 1; exon_id "ENSMUSE00001326352.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000049254.1"; havana_transcript "OTTMUST00000125612.1";
mm10-chrY	HAVANA	exon	30155911	30156092	.	+	.	gene_id "ENSMUSG00000101642.6"; transcript_id "ENSMUST00000190162.1"; gene_type "lincRNA"; gene_name "Gm29315"; transcript_type "lincRNA"; transcript_name "Gm29315-202"; exon_number 2; exon_id "ENSMUSE00001328936.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000049254.1"; havana_transcript "OTTMUST00000125612.1";
mm10-chrY	HAVANA	exon	30157530	30157598	.	+	.	gene_id "ENSMUSG00000101642.6"; transcript_id "ENSMUST00000190162.1"; gene_type "lincRNA"; gene_name "Gm29315"; transcript_type "lincRNA"; transcript_name "Gm29315-202"; exon_number 3; exon_id "ENSMUSE00001330671.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000049254.1"; havana_transcript "OTTMUST00000125612.1";
mm10-chrY	HAVANA	gene	30195252	30195779	.	+	.	gene_id "ENSMUSG00000101719.1"; gene_type "lincRNA"; gene_name "Gm28216"; level 2; havana_gene "OTTMUSG00000049268.1";
mm10-chrY	HAVANA	transcript	30195252	30195779	.	+	.	gene_id "ENSMUSG00000101719.1"; transcript_id "ENSMUST00000188785.1"; gene_type "lincRNA"; gene_name "Gm28216"; transcript_type "lincRNA"; transcript_name "Gm28216-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049268.1"; havana_transcript "OTTMUST00000125647.1";
mm10-chrY	HAVANA	exon	30195252	30195356	.	+	.	gene_id "ENSMUSG00000101719.1"; transcript_id "ENSMUST00000188785.1"; gene_type "lincRNA"; gene_name "Gm28216"; transcript_type "lincRNA"; transcript_name "Gm28216-201"; exon_number 1; exon_id "ENSMUSE00001322681.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049268.1"; havana_transcript "OTTMUST00000125647.1";
mm10-chrY	HAVANA	exon	30195711	30195779	.	+	.	gene_id "ENSMUSG00000101719.1"; transcript_id "ENSMUST00000188785.1"; gene_type "lincRNA"; gene_name "Gm28216"; transcript_type "lincRNA"; transcript_name "Gm28216-201"; exon_number 2; exon_id "ENSMUSE00001324397.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049268.1"; havana_transcript "OTTMUST00000125647.1";
mm10-chrY	HAVANA	gene	30310104	30311114	.	-	.	gene_id "ENSMUSG00000100896.1"; gene_type "lincRNA"; gene_name "Gm28217"; level 2; havana_gene "OTTMUSG00000049269.1";
mm10-chrY	HAVANA	transcript	30310104	30311114	.	-	.	gene_id "ENSMUSG00000100896.1"; transcript_id "ENSMUST00000188613.1"; gene_type "lincRNA"; gene_name "Gm28217"; transcript_type "lincRNA"; transcript_name "Gm28217-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049269.1"; havana_transcript "OTTMUST00000125648.1";
mm10-chrY	HAVANA	exon	30310877	30311114	.	-	.	gene_id "ENSMUSG00000100896.1"; transcript_id "ENSMUST00000188613.1"; gene_type "lincRNA"; gene_name "Gm28217"; transcript_type "lincRNA"; transcript_name "Gm28217-201"; exon_number 1; exon_id "ENSMUSE00001323013.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049269.1"; havana_transcript "OTTMUST00000125648.1";
mm10-chrY	HAVANA	exon	30310104	30310513	.	-	.	gene_id "ENSMUSG00000100896.1"; transcript_id "ENSMUST00000188613.1"; gene_type "lincRNA"; gene_name "Gm28217"; transcript_type "lincRNA"; transcript_name "Gm28217-201"; exon_number 2; exon_id "ENSMUSE00001331441.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049269.1"; havana_transcript "OTTMUST00000125648.1";
mm10-chrY	HAVANA	gene	30360777	30361472	.	-	.	gene_id "ENSMUSG00000099347.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28093"; level 2; havana_gene "OTTMUSG00000049270.1";
mm10-chrY	HAVANA	transcript	30360777	30361472	.	-	.	gene_id "ENSMUSG00000099347.1"; transcript_id "ENSMUST00000189016.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28093"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28093-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049270.1"; havana_transcript "OTTMUST00000125649.1";
mm10-chrY	HAVANA	exon	30360777	30361472	.	-	.	gene_id "ENSMUSG00000099347.1"; transcript_id "ENSMUST00000189016.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28093"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28093-201"; exon_number 1; exon_id "ENSMUSE00001328496.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049270.1"; havana_transcript "OTTMUST00000125649.1";
mm10-chrY	HAVANA	gene	30396170	30396697	.	+	.	gene_id "ENSMUSG00000101379.1"; gene_type "lincRNA"; gene_name "Gm28092"; level 2; havana_gene "OTTMUSG00000049271.1";
mm10-chrY	HAVANA	transcript	30396170	30396697	.	+	.	gene_id "ENSMUSG00000101379.1"; transcript_id "ENSMUST00000186709.1"; gene_type "lincRNA"; gene_name "Gm28092"; transcript_type "lincRNA"; transcript_name "Gm28092-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049271.1"; havana_transcript "OTTMUST00000125650.1";
mm10-chrY	HAVANA	exon	30396170	30396274	.	+	.	gene_id "ENSMUSG00000101379.1"; transcript_id "ENSMUST00000186709.1"; gene_type "lincRNA"; gene_name "Gm28092"; transcript_type "lincRNA"; transcript_name "Gm28092-201"; exon_number 1; exon_id "ENSMUSE00001318069.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049271.1"; havana_transcript "OTTMUST00000125650.1";
mm10-chrY	HAVANA	exon	30396629	30396697	.	+	.	gene_id "ENSMUSG00000101379.1"; transcript_id "ENSMUST00000186709.1"; gene_type "lincRNA"; gene_name "Gm28092"; transcript_type "lincRNA"; transcript_name "Gm28092-201"; exon_number 2; exon_id "ENSMUSE00001335618.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049271.1"; havana_transcript "OTTMUST00000125650.1";
mm10-chrY	HAVANA	gene	30423567	30425930	.	+	.	gene_id "ENSMUSG00000100565.6"; gene_type "lincRNA"; gene_name "Gm28091"; level 2; havana_gene "OTTMUSG00000049272.1";
mm10-chrY	HAVANA	transcript	30423567	30425930	.	+	.	gene_id "ENSMUSG00000100565.6"; transcript_id "ENSMUST00000190912.6"; gene_type "lincRNA"; gene_name "Gm28091"; transcript_type "lincRNA"; transcript_name "Gm28091-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049272.1"; havana_transcript "OTTMUST00000125651.1";
mm10-chrY	HAVANA	exon	30423567	30423752	.	+	.	gene_id "ENSMUSG00000100565.6"; transcript_id "ENSMUST00000190912.6"; gene_type "lincRNA"; gene_name "Gm28091"; transcript_type "lincRNA"; transcript_name "Gm28091-202"; exon_number 1; exon_id "ENSMUSE00001321040.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049272.1"; havana_transcript "OTTMUST00000125651.1";
mm10-chrY	HAVANA	exon	30424240	30424421	.	+	.	gene_id "ENSMUSG00000100565.6"; transcript_id "ENSMUST00000190912.6"; gene_type "lincRNA"; gene_name "Gm28091"; transcript_type "lincRNA"; transcript_name "Gm28091-202"; exon_number 2; exon_id "ENSMUSE00001320173.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049272.1"; havana_transcript "OTTMUST00000125651.1";
mm10-chrY	HAVANA	exon	30425862	30425930	.	+	.	gene_id "ENSMUSG00000100565.6"; transcript_id "ENSMUST00000190912.6"; gene_type "lincRNA"; gene_name "Gm28091"; transcript_type "lincRNA"; transcript_name "Gm28091-202"; exon_number 3; exon_id "ENSMUSE00001318839.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049272.1"; havana_transcript "OTTMUST00000125651.1";
mm10-chrY	HAVANA	transcript	30423567	30425930	.	+	.	gene_id "ENSMUSG00000100565.6"; transcript_id "ENSMUST00000188421.1"; gene_type "lincRNA"; gene_name "Gm28091"; transcript_type "lincRNA"; transcript_name "Gm28091-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049272.1"; havana_transcript "OTTMUST00000125652.1";
mm10-chrY	HAVANA	exon	30423567	30423752	.	+	.	gene_id "ENSMUSG00000100565.6"; transcript_id "ENSMUST00000188421.1"; gene_type "lincRNA"; gene_name "Gm28091"; transcript_type "lincRNA"; transcript_name "Gm28091-201"; exon_number 1; exon_id "ENSMUSE00001321040.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049272.1"; havana_transcript "OTTMUST00000125652.1";
mm10-chrY	HAVANA	exon	30424240	30424421	.	+	.	gene_id "ENSMUSG00000100565.6"; transcript_id "ENSMUST00000188421.1"; gene_type "lincRNA"; gene_name "Gm28091"; transcript_type "lincRNA"; transcript_name "Gm28091-201"; exon_number 2; exon_id "ENSMUSE00001320173.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049272.1"; havana_transcript "OTTMUST00000125652.1";
mm10-chrY	HAVANA	exon	30425149	30425333	.	+	.	gene_id "ENSMUSG00000100565.6"; transcript_id "ENSMUST00000188421.1"; gene_type "lincRNA"; gene_name "Gm28091"; transcript_type "lincRNA"; transcript_name "Gm28091-201"; exon_number 3; exon_id "ENSMUSE00001322506.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049272.1"; havana_transcript "OTTMUST00000125652.1";
mm10-chrY	HAVANA	exon	30425862	30425930	.	+	.	gene_id "ENSMUSG00000100565.6"; transcript_id "ENSMUST00000188421.1"; gene_type "lincRNA"; gene_name "Gm28091"; transcript_type "lincRNA"; transcript_name "Gm28091-201"; exon_number 4; exon_id "ENSMUSE00001318839.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049272.1"; havana_transcript "OTTMUST00000125652.1";
mm10-chrY	HAVANA	gene	30499157	30523557	.	+	.	gene_id "ENSMUSG00000101489.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28090"; level 2; havana_gene "OTTMUSG00000049273.1";
mm10-chrY	HAVANA	transcript	30499157	30523557	.	+	.	gene_id "ENSMUSG00000101489.1"; transcript_id "ENSMUST00000189458.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28090"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28090-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049273.1"; havana_transcript "OTTMUST00000125653.1";
mm10-chrY	HAVANA	exon	30499157	30499274	.	+	.	gene_id "ENSMUSG00000101489.1"; transcript_id "ENSMUST00000189458.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28090"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28090-201"; exon_number 1; exon_id "ENSMUSE00001330552.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049273.1"; havana_transcript "OTTMUST00000125653.1";
mm10-chrY	HAVANA	exon	30504586	30504652	.	+	.	gene_id "ENSMUSG00000101489.1"; transcript_id "ENSMUST00000189458.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28090"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28090-201"; exon_number 2; exon_id "ENSMUSE00001333769.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049273.1"; havana_transcript "OTTMUST00000125653.1";
mm10-chrY	HAVANA	exon	30505228	30505262	.	+	.	gene_id "ENSMUSG00000101489.1"; transcript_id "ENSMUST00000189458.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28090"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28090-201"; exon_number 3; exon_id "ENSMUSE00001334185.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049273.1"; havana_transcript "OTTMUST00000125653.1";
mm10-chrY	HAVANA	exon	30512280	30512346	.	+	.	gene_id "ENSMUSG00000101489.1"; transcript_id "ENSMUST00000189458.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28090"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28090-201"; exon_number 4; exon_id "ENSMUSE00001330458.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049273.1"; havana_transcript "OTTMUST00000125653.1";
mm10-chrY	HAVANA	exon	30512908	30512942	.	+	.	gene_id "ENSMUSG00000101489.1"; transcript_id "ENSMUST00000189458.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28090"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28090-201"; exon_number 5; exon_id "ENSMUSE00001327899.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049273.1"; havana_transcript "OTTMUST00000125653.1";
mm10-chrY	HAVANA	exon	30520091	30520208	.	+	.	gene_id "ENSMUSG00000101489.1"; transcript_id "ENSMUST00000189458.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28090"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28090-201"; exon_number 6; exon_id "ENSMUSE00001325449.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049273.1"; havana_transcript "OTTMUST00000125653.1";
mm10-chrY	HAVANA	exon	30520953	30521052	.	+	.	gene_id "ENSMUSG00000101489.1"; transcript_id "ENSMUST00000189458.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28090"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28090-201"; exon_number 7; exon_id "ENSMUSE00001331473.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049273.1"; havana_transcript "OTTMUST00000125653.1";
mm10-chrY	HAVANA	exon	30523075	30523171	.	+	.	gene_id "ENSMUSG00000101489.1"; transcript_id "ENSMUST00000189458.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28090"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28090-201"; exon_number 8; exon_id "ENSMUSE00001327271.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049273.1"; havana_transcript "OTTMUST00000125653.1";
mm10-chrY	HAVANA	exon	30523531	30523557	.	+	.	gene_id "ENSMUSG00000101489.1"; transcript_id "ENSMUST00000189458.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28090"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28090-201"; exon_number 9; exon_id "ENSMUSE00001324172.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049273.1"; havana_transcript "OTTMUST00000125653.1";
mm10-chrY	HAVANA	gene	30542567	30543013	.	+	.	gene_id "ENSMUSG00000100038.1"; gene_type "lincRNA"; gene_name "Gm29580"; level 2; havana_gene "OTTMUSG00000049302.1";
mm10-chrY	HAVANA	transcript	30542567	30543013	.	+	.	gene_id "ENSMUSG00000100038.1"; transcript_id "ENSMUST00000189921.1"; gene_type "lincRNA"; gene_name "Gm29580"; transcript_type "lincRNA"; transcript_name "Gm29580-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049302.1"; havana_transcript "OTTMUST00000125697.1";
mm10-chrY	HAVANA	exon	30542567	30542671	.	+	.	gene_id "ENSMUSG00000100038.1"; transcript_id "ENSMUST00000189921.1"; gene_type "lincRNA"; gene_name "Gm29580"; transcript_type "lincRNA"; transcript_name "Gm29580-201"; exon_number 1; exon_id "ENSMUSE00001332883.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049302.1"; havana_transcript "OTTMUST00000125697.1";
mm10-chrY	HAVANA	exon	30542953	30543013	.	+	.	gene_id "ENSMUSG00000100038.1"; transcript_id "ENSMUST00000189921.1"; gene_type "lincRNA"; gene_name "Gm29580"; transcript_type "lincRNA"; transcript_name "Gm29580-201"; exon_number 2; exon_id "ENSMUSE00001318433.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049302.1"; havana_transcript "OTTMUST00000125697.1";
mm10-chrY	HAVANA	gene	30613153	30616388	.	-	.	gene_id "ENSMUSG00000100415.6"; gene_type "lincRNA"; gene_name "Gm28089"; level 2; havana_gene "OTTMUSG00000049274.1";
mm10-chrY	HAVANA	transcript	30613153	30616388	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000187266.6"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125654.1";
mm10-chrY	HAVANA	exon	30615751	30616388	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000187266.6"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-202"; exon_number 1; exon_id "ENSMUSE00001331595.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125654.1";
mm10-chrY	HAVANA	exon	30615082	30615267	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000187266.6"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-202"; exon_number 2; exon_id "ENSMUSE00001330608.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125654.1";
mm10-chrY	HAVANA	exon	30614171	30614354	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000187266.6"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-202"; exon_number 3; exon_id "ENSMUSE00001328849.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125654.1";
mm10-chrY	HAVANA	exon	30613153	30613642	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000187266.6"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-202"; exon_number 4; exon_id "ENSMUSE00001319176.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125654.1";
mm10-chrY	HAVANA	transcript	30613574	30615936	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000190956.6"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-203"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125655.1";
mm10-chrY	HAVANA	exon	30615751	30615936	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000190956.6"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-203"; exon_number 1; exon_id "ENSMUSE00001335634.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125655.1";
mm10-chrY	HAVANA	exon	30615082	30615263	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000190956.6"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-203"; exon_number 2; exon_id "ENSMUSE00001323665.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125655.1";
mm10-chrY	HAVANA	exon	30614171	30614354	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000190956.6"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-203"; exon_number 3; exon_id "ENSMUSE00001328849.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125655.1";
mm10-chrY	HAVANA	exon	30613574	30613642	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000190956.6"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-203"; exon_number 4; exon_id "ENSMUSE00001327033.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125655.1";
mm10-chrY	HAVANA	transcript	30613574	30615936	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000185769.1"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125656.1";
mm10-chrY	HAVANA	exon	30615751	30615936	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000185769.1"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-201"; exon_number 1; exon_id "ENSMUSE00001335634.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125656.1";
mm10-chrY	HAVANA	exon	30615082	30615263	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000185769.1"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-201"; exon_number 2; exon_id "ENSMUSE00001323665.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125656.1";
mm10-chrY	HAVANA	exon	30613574	30613642	.	-	.	gene_id "ENSMUSG00000100415.6"; transcript_id "ENSMUST00000185769.1"; gene_type "lincRNA"; gene_name "Gm28089"; transcript_type "lincRNA"; transcript_name "Gm28089-201"; exon_number 3; exon_id "ENSMUSE00001327033.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049274.1"; havana_transcript "OTTMUST00000125656.1";
mm10-chrY	HAVANA	gene	30642087	30645319	.	-	.	gene_id "ENSMUSG00000101775.6"; gene_type "lincRNA"; gene_name "Gm28088"; level 2; havana_gene "OTTMUSG00000049275.1";
mm10-chrY	HAVANA	transcript	30642087	30645319	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000187402.6"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125657.1";
mm10-chrY	HAVANA	exon	30644681	30645319	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000187402.6"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-202"; exon_number 1; exon_id "ENSMUSE00001318359.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125657.1";
mm10-chrY	HAVANA	exon	30644014	30644196	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000187402.6"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-202"; exon_number 2; exon_id "ENSMUSE00001328648.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125657.1";
mm10-chrY	HAVANA	exon	30643104	30643284	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000187402.6"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-202"; exon_number 3; exon_id "ENSMUSE00001326865.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125657.1";
mm10-chrY	HAVANA	exon	30642087	30642576	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000187402.6"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-202"; exon_number 4; exon_id "ENSMUSE00001328960.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125657.1";
mm10-chrY	HAVANA	transcript	30642511	30644866	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000188537.6"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125658.1";
mm10-chrY	HAVANA	exon	30644681	30644866	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000188537.6"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-203"; exon_number 1; exon_id "ENSMUSE00001324735.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125658.1";
mm10-chrY	HAVANA	exon	30644014	30644192	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000188537.6"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-203"; exon_number 2; exon_id "ENSMUSE00001324816.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125658.1";
mm10-chrY	HAVANA	exon	30642511	30642576	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000188537.6"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-203"; exon_number 3; exon_id "ENSMUSE00001332140.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125658.1";
mm10-chrY	HAVANA	transcript	30642511	30644866	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000185998.1"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125659.1";
mm10-chrY	HAVANA	exon	30644681	30644866	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000185998.1"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-201"; exon_number 1; exon_id "ENSMUSE00001324735.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125659.1";
mm10-chrY	HAVANA	exon	30644014	30644192	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000185998.1"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-201"; exon_number 2; exon_id "ENSMUSE00001324816.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125659.1";
mm10-chrY	HAVANA	exon	30643104	30643284	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000185998.1"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-201"; exon_number 3; exon_id "ENSMUSE00001326865.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125659.1";
mm10-chrY	HAVANA	exon	30642511	30642576	.	-	.	gene_id "ENSMUSG00000101775.6"; transcript_id "ENSMUST00000185998.1"; gene_type "lincRNA"; gene_name "Gm28088"; transcript_type "lincRNA"; transcript_name "Gm28088-201"; exon_number 4; exon_id "ENSMUSE00001332140.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049275.1"; havana_transcript "OTTMUST00000125659.1";
mm10-chrY	HAVANA	gene	30676282	30676728	.	-	.	gene_id "ENSMUSG00000100321.1"; gene_type "lincRNA"; gene_name "Gm29579"; level 2; havana_gene "OTTMUSG00000049303.1";
mm10-chrY	HAVANA	transcript	30676282	30676728	.	-	.	gene_id "ENSMUSG00000100321.1"; transcript_id "ENSMUST00000190820.1"; gene_type "lincRNA"; gene_name "Gm29579"; transcript_type "lincRNA"; transcript_name "Gm29579-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049303.1"; havana_transcript "OTTMUST00000125698.1";
mm10-chrY	HAVANA	exon	30676624	30676728	.	-	.	gene_id "ENSMUSG00000100321.1"; transcript_id "ENSMUST00000190820.1"; gene_type "lincRNA"; gene_name "Gm29579"; transcript_type "lincRNA"; transcript_name "Gm29579-201"; exon_number 1; exon_id "ENSMUSE00001331048.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049303.1"; havana_transcript "OTTMUST00000125698.1";
mm10-chrY	HAVANA	exon	30676282	30676342	.	-	.	gene_id "ENSMUSG00000100321.1"; transcript_id "ENSMUST00000190820.1"; gene_type "lincRNA"; gene_name "Gm29579"; transcript_type "lincRNA"; transcript_name "Gm29579-201"; exon_number 2; exon_id "ENSMUSE00001330156.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049303.1"; havana_transcript "OTTMUST00000125698.1";
mm10-chrY	HAVANA	gene	30706533	30738561	.	-	.	gene_id "ENSMUSG00000100467.1"; gene_type "protein_coding"; gene_name "Gm29582"; level 2; havana_gene "OTTMUSG00000049304.1";
mm10-chrY	HAVANA	transcript	30706533	30738561	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	exon	30738518	30738561	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 1; exon_id "ENSMUSE00001327559.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	exon	30737023	30737154	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 2; exon_id "ENSMUSE00001319183.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	CDS	30737023	30737140	.	-	0	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 2; exon_id "ENSMUSE00001319183.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	start_codon	30737138	30737140	.	-	0	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 2; exon_id "ENSMUSE00001319183.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	exon	30725631	30725697	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 3; exon_id "ENSMUSE00001320669.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	CDS	30725631	30725697	.	-	2	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 3; exon_id "ENSMUSE00001320669.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	exon	30725046	30725080	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 4; exon_id "ENSMUSE00001318978.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	CDS	30725046	30725080	.	-	1	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 4; exon_id "ENSMUSE00001318978.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	exon	30717945	30718011	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 5; exon_id "ENSMUSE00001331197.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	CDS	30717945	30718011	.	-	2	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 5; exon_id "ENSMUSE00001331197.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	exon	30717347	30717381	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 6; exon_id "ENSMUSE00001321490.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	CDS	30717347	30717381	.	-	1	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 6; exon_id "ENSMUSE00001321490.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	exon	30710090	30710207	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 7; exon_id "ENSMUSE00001334478.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	CDS	30710090	30710207	.	-	2	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 7; exon_id "ENSMUSE00001334478.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	exon	30709238	30709337	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 8; exon_id "ENSMUSE00001325769.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	CDS	30709238	30709337	.	-	1	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 8; exon_id "ENSMUSE00001325769.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	exon	30707125	30707223	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 9; exon_id "ENSMUSE00001332557.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	CDS	30707125	30707223	.	-	0	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 9; exon_id "ENSMUSE00001332557.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	exon	30706533	30706766	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 10; exon_id "ENSMUSE00001328831.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	CDS	30706740	30706766	.	-	0	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 10; exon_id "ENSMUSE00001328831.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	stop_codon	30706737	30706739	.	-	0	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 10; exon_id "ENSMUSE00001328831.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	UTR	30738518	30738561	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 1; exon_id "ENSMUSE00001327559.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	UTR	30737141	30737154	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 2; exon_id "ENSMUSE00001319183.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	UTR	30706533	30706739	.	-	.	gene_id "ENSMUSG00000100467.1"; transcript_id "ENSMUST00000185667.1"; gene_type "protein_coding"; gene_name "Gm29582"; transcript_type "protein_coding"; transcript_name "Gm29582-201"; exon_number 10; exon_id "ENSMUSE00001328831.1"; level 2; protein_id "ENSMUSP00000139915.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049304.1"; havana_transcript "OTTMUST00000125699.1";
mm10-chrY	HAVANA	gene	30839757	30840284	.	-	.	gene_id "ENSMUSG00000095192.2"; gene_type "lincRNA"; gene_name "Gm21529"; level 2; havana_gene "OTTMUSG00000049305.1";
mm10-chrY	HAVANA	transcript	30839757	30840284	.	-	.	gene_id "ENSMUSG00000095192.2"; transcript_id "ENSMUST00000188473.1"; gene_type "lincRNA"; gene_name "Gm21529"; transcript_type "lincRNA"; transcript_name "Gm21529-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049305.1"; havana_transcript "OTTMUST00000125700.1";
mm10-chrY	HAVANA	exon	30840180	30840284	.	-	.	gene_id "ENSMUSG00000095192.2"; transcript_id "ENSMUST00000188473.1"; gene_type "lincRNA"; gene_name "Gm21529"; transcript_type "lincRNA"; transcript_name "Gm21529-202"; exon_number 1; exon_id "ENSMUSE00001331387.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049305.1"; havana_transcript "OTTMUST00000125700.1";
mm10-chrY	HAVANA	exon	30839757	30839825	.	-	.	gene_id "ENSMUSG00000095192.2"; transcript_id "ENSMUST00000188473.1"; gene_type "lincRNA"; gene_name "Gm21529"; transcript_type "lincRNA"; transcript_name "Gm21529-202"; exon_number 2; exon_id "ENSMUSE00001332857.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049305.1"; havana_transcript "OTTMUST00000125700.1";
mm10-chrY	ENSEMBL	transcript	30839781	30840278	.	-	.	gene_id "ENSMUSG00000095192.2"; transcript_id "ENSMUST00000180175.1"; gene_type "lincRNA"; gene_name "Gm21529"; transcript_type "lincRNA"; transcript_name "Gm21529-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049305.1";
mm10-chrY	ENSEMBL	exon	30839781	30840278	.	-	.	gene_id "ENSMUSG00000095192.2"; transcript_id "ENSMUST00000180175.1"; gene_type "lincRNA"; gene_name "Gm21529"; transcript_type "lincRNA"; transcript_name "Gm21529-201"; exon_number 1; exon_id "ENSMUSE00001033186.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049305.1";
mm10-chrY	HAVANA	gene	30881302	30883666	.	-	.	gene_id "ENSMUSG00000100311.6"; gene_type "lincRNA"; gene_name "Gm29581"; level 2; havana_gene "OTTMUSG00000049306.1";
mm10-chrY	HAVANA	transcript	30881302	30883666	.	-	.	gene_id "ENSMUSG00000100311.6"; transcript_id "ENSMUST00000186083.6"; gene_type "lincRNA"; gene_name "Gm29581"; transcript_type "lincRNA"; transcript_name "Gm29581-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049306.1"; havana_transcript "OTTMUST00000125701.1";
mm10-chrY	HAVANA	exon	30883481	30883666	.	-	.	gene_id "ENSMUSG00000100311.6"; transcript_id "ENSMUST00000186083.6"; gene_type "lincRNA"; gene_name "Gm29581"; transcript_type "lincRNA"; transcript_name "Gm29581-201"; exon_number 1; exon_id "ENSMUSE00001323093.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049306.1"; havana_transcript "OTTMUST00000125701.1";
mm10-chrY	HAVANA	exon	30882812	30882993	.	-	.	gene_id "ENSMUSG00000100311.6"; transcript_id "ENSMUST00000186083.6"; gene_type "lincRNA"; gene_name "Gm29581"; transcript_type "lincRNA"; transcript_name "Gm29581-201"; exon_number 2; exon_id "ENSMUSE00001335019.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049306.1"; havana_transcript "OTTMUST00000125701.1";
mm10-chrY	HAVANA	exon	30881899	30882083	.	-	.	gene_id "ENSMUSG00000100311.6"; transcript_id "ENSMUST00000186083.6"; gene_type "lincRNA"; gene_name "Gm29581"; transcript_type "lincRNA"; transcript_name "Gm29581-201"; exon_number 3; exon_id "ENSMUSE00001320023.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049306.1"; havana_transcript "OTTMUST00000125701.1";
mm10-chrY	HAVANA	exon	30881302	30881370	.	-	.	gene_id "ENSMUSG00000100311.6"; transcript_id "ENSMUST00000186083.6"; gene_type "lincRNA"; gene_name "Gm29581"; transcript_type "lincRNA"; transcript_name "Gm29581-201"; exon_number 4; exon_id "ENSMUSE00001325970.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049306.1"; havana_transcript "OTTMUST00000125701.1";
mm10-chrY	HAVANA	transcript	30881302	30883666	.	-	.	gene_id "ENSMUSG00000100311.6"; transcript_id "ENSMUST00000187784.1"; gene_type "lincRNA"; gene_name "Gm29581"; transcript_type "lincRNA"; transcript_name "Gm29581-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049306.1"; havana_transcript "OTTMUST00000125702.1";
mm10-chrY	HAVANA	exon	30883481	30883666	.	-	.	gene_id "ENSMUSG00000100311.6"; transcript_id "ENSMUST00000187784.1"; gene_type "lincRNA"; gene_name "Gm29581"; transcript_type "lincRNA"; transcript_name "Gm29581-202"; exon_number 1; exon_id "ENSMUSE00001323093.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049306.1"; havana_transcript "OTTMUST00000125702.1";
mm10-chrY	HAVANA	exon	30882812	30882993	.	-	.	gene_id "ENSMUSG00000100311.6"; transcript_id "ENSMUST00000187784.1"; gene_type "lincRNA"; gene_name "Gm29581"; transcript_type "lincRNA"; transcript_name "Gm29581-202"; exon_number 2; exon_id "ENSMUSE00001335019.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049306.1"; havana_transcript "OTTMUST00000125702.1";
mm10-chrY	HAVANA	exon	30881302	30881370	.	-	.	gene_id "ENSMUSG00000100311.6"; transcript_id "ENSMUST00000187784.1"; gene_type "lincRNA"; gene_name "Gm29581"; transcript_type "lincRNA"; transcript_name "Gm29581-202"; exon_number 3; exon_id "ENSMUSE00001325970.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049306.1"; havana_transcript "OTTMUST00000125702.1";
mm10-chrY	HAVANA	gene	30905987	30906514	.	-	.	gene_id "ENSMUSG00000094232.2"; gene_type "lincRNA"; gene_name "Gm21539"; level 2; havana_gene "OTTMUSG00000049307.1";
mm10-chrY	HAVANA	transcript	30905987	30906514	.	-	.	gene_id "ENSMUSG00000094232.2"; transcript_id "ENSMUST00000188764.1"; gene_type "lincRNA"; gene_name "Gm21539"; transcript_type "lincRNA"; transcript_name "Gm21539-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049307.1"; havana_transcript "OTTMUST00000125703.1";
mm10-chrY	HAVANA	exon	30906410	30906514	.	-	.	gene_id "ENSMUSG00000094232.2"; transcript_id "ENSMUST00000188764.1"; gene_type "lincRNA"; gene_name "Gm21539"; transcript_type "lincRNA"; transcript_name "Gm21539-202"; exon_number 1; exon_id "ENSMUSE00001319267.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049307.1"; havana_transcript "OTTMUST00000125703.1";
mm10-chrY	HAVANA	exon	30905987	30906055	.	-	.	gene_id "ENSMUSG00000094232.2"; transcript_id "ENSMUST00000188764.1"; gene_type "lincRNA"; gene_name "Gm21539"; transcript_type "lincRNA"; transcript_name "Gm21539-202"; exon_number 2; exon_id "ENSMUSE00001318199.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049307.1"; havana_transcript "OTTMUST00000125703.1";
mm10-chrY	ENSEMBL	transcript	30906011	30906508	.	-	.	gene_id "ENSMUSG00000094232.2"; transcript_id "ENSMUST00000177925.1"; gene_type "lincRNA"; gene_name "Gm21539"; transcript_type "lincRNA"; transcript_name "Gm21539-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049307.1";
mm10-chrY	ENSEMBL	exon	30906011	30906508	.	-	.	gene_id "ENSMUSG00000094232.2"; transcript_id "ENSMUST00000177925.1"; gene_type "lincRNA"; gene_name "Gm21539"; transcript_type "lincRNA"; transcript_name "Gm21539-201"; exon_number 1; exon_id "ENSMUSE00001053871.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049307.1";
mm10-chrY	HAVANA	gene	30943800	30946078	.	-	.	gene_id "ENSMUSG00000099990.6"; gene_type "lincRNA"; gene_name "Gm29578"; level 2; havana_gene "OTTMUSG00000049308.1";
mm10-chrY	HAVANA	transcript	30943800	30946078	.	-	.	gene_id "ENSMUSG00000099990.6"; transcript_id "ENSMUST00000188809.6"; gene_type "lincRNA"; gene_name "Gm29578"; transcript_type "lincRNA"; transcript_name "Gm29578-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049308.1"; havana_transcript "OTTMUST00000125704.1";
mm10-chrY	HAVANA	exon	30945978	30946078	.	-	.	gene_id "ENSMUSG00000099990.6"; transcript_id "ENSMUST00000188809.6"; gene_type "lincRNA"; gene_name "Gm29578"; transcript_type "lincRNA"; transcript_name "Gm29578-201"; exon_number 1; exon_id "ENSMUSE00001325052.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049308.1"; havana_transcript "OTTMUST00000125704.1";
mm10-chrY	HAVANA	exon	30945309	30945490	.	-	.	gene_id "ENSMUSG00000099990.6"; transcript_id "ENSMUST00000188809.6"; gene_type "lincRNA"; gene_name "Gm29578"; transcript_type "lincRNA"; transcript_name "Gm29578-201"; exon_number 2; exon_id "ENSMUSE00001331859.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049308.1"; havana_transcript "OTTMUST00000125704.1";
mm10-chrY	HAVANA	exon	30944396	30944580	.	-	.	gene_id "ENSMUSG00000099990.6"; transcript_id "ENSMUST00000188809.6"; gene_type "lincRNA"; gene_name "Gm29578"; transcript_type "lincRNA"; transcript_name "Gm29578-201"; exon_number 3; exon_id "ENSMUSE00001324828.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049308.1"; havana_transcript "OTTMUST00000125704.1";
mm10-chrY	HAVANA	exon	30943800	30943868	.	-	.	gene_id "ENSMUSG00000099990.6"; transcript_id "ENSMUST00000188809.6"; gene_type "lincRNA"; gene_name "Gm29578"; transcript_type "lincRNA"; transcript_name "Gm29578-201"; exon_number 4; exon_id "ENSMUSE00001331334.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049308.1"; havana_transcript "OTTMUST00000125704.1";
mm10-chrY	HAVANA	transcript	30943800	30946078	.	-	.	gene_id "ENSMUSG00000099990.6"; transcript_id "ENSMUST00000190180.1"; gene_type "lincRNA"; gene_name "Gm29578"; transcript_type "lincRNA"; transcript_name "Gm29578-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049308.1"; havana_transcript "OTTMUST00000125705.1";
mm10-chrY	HAVANA	exon	30945978	30946078	.	-	.	gene_id "ENSMUSG00000099990.6"; transcript_id "ENSMUST00000190180.1"; gene_type "lincRNA"; gene_name "Gm29578"; transcript_type "lincRNA"; transcript_name "Gm29578-202"; exon_number 1; exon_id "ENSMUSE00001325052.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049308.1"; havana_transcript "OTTMUST00000125705.1";
mm10-chrY	HAVANA	exon	30945309	30945490	.	-	.	gene_id "ENSMUSG00000099990.6"; transcript_id "ENSMUST00000190180.1"; gene_type "lincRNA"; gene_name "Gm29578"; transcript_type "lincRNA"; transcript_name "Gm29578-202"; exon_number 2; exon_id "ENSMUSE00001331859.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049308.1"; havana_transcript "OTTMUST00000125705.1";
mm10-chrY	HAVANA	exon	30943800	30943868	.	-	.	gene_id "ENSMUSG00000099990.6"; transcript_id "ENSMUST00000190180.1"; gene_type "lincRNA"; gene_name "Gm29578"; transcript_type "lincRNA"; transcript_name "Gm29578-202"; exon_number 3; exon_id "ENSMUSE00001331334.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049308.1"; havana_transcript "OTTMUST00000125705.1";
mm10-chrY	HAVANA	gene	31231982	31232677	.	-	.	gene_id "ENSMUSG00000101527.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21908"; level 2; havana_gene "OTTMUSG00000049326.1";
mm10-chrY	HAVANA	transcript	31231982	31232677	.	-	.	gene_id "ENSMUSG00000101527.1"; transcript_id "ENSMUST00000191224.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21908"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21908-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049326.1"; havana_transcript "OTTMUST00000125756.1";
mm10-chrY	HAVANA	exon	31231982	31232677	.	-	.	gene_id "ENSMUSG00000101527.1"; transcript_id "ENSMUST00000191224.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21908"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21908-201"; exon_number 1; exon_id "ENSMUSE00001327340.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049326.1"; havana_transcript "OTTMUST00000125756.1";
mm10-chrY	HAVANA	gene	31267477	31268004	.	+	.	gene_id "ENSMUSG00000096698.2"; gene_type "lincRNA"; gene_name "Gm21780"; level 2; havana_gene "OTTMUSG00000049174.1";
mm10-chrY	HAVANA	transcript	31267477	31268004	.	+	.	gene_id "ENSMUSG00000096698.2"; transcript_id "ENSMUST00000187110.1"; gene_type "lincRNA"; gene_name "Gm21780"; transcript_type "lincRNA"; transcript_name "Gm21780-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049174.1"; havana_transcript "OTTMUST00000125471.1";
mm10-chrY	HAVANA	exon	31267477	31267581	.	+	.	gene_id "ENSMUSG00000096698.2"; transcript_id "ENSMUST00000187110.1"; gene_type "lincRNA"; gene_name "Gm21780"; transcript_type "lincRNA"; transcript_name "Gm21780-202"; exon_number 1; exon_id "ENSMUSE00001331205.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049174.1"; havana_transcript "OTTMUST00000125471.1";
mm10-chrY	HAVANA	exon	31267936	31268004	.	+	.	gene_id "ENSMUSG00000096698.2"; transcript_id "ENSMUST00000187110.1"; gene_type "lincRNA"; gene_name "Gm21780"; transcript_type "lincRNA"; transcript_name "Gm21780-202"; exon_number 2; exon_id "ENSMUSE00001333713.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049174.1"; havana_transcript "OTTMUST00000125471.1";
mm10-chrY	ENSEMBL	transcript	31267483	31267980	.	+	.	gene_id "ENSMUSG00000096698.2"; transcript_id "ENSMUST00000180128.1"; gene_type "lincRNA"; gene_name "Gm21780"; transcript_type "lincRNA"; transcript_name "Gm21780-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049174.1";
mm10-chrY	ENSEMBL	exon	31267483	31267980	.	+	.	gene_id "ENSMUSG00000096698.2"; transcript_id "ENSMUST00000180128.1"; gene_type "lincRNA"; gene_name "Gm21780"; transcript_type "lincRNA"; transcript_name "Gm21780-201"; exon_number 1; exon_id "ENSMUSE00001044592.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049174.1";
mm10-chrY	HAVANA	gene	31290381	31292742	.	+	.	gene_id "ENSMUSG00000099855.6"; gene_type "lincRNA"; gene_name "Gm28486"; level 2; havana_gene "OTTMUSG00000049212.1";
mm10-chrY	HAVANA	transcript	31290381	31292742	.	+	.	gene_id "ENSMUSG00000099855.6"; transcript_id "ENSMUST00000190984.6"; gene_type "lincRNA"; gene_name "Gm28486"; transcript_type "lincRNA"; transcript_name "Gm28486-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049212.1"; havana_transcript "OTTMUST00000125551.1";
mm10-chrY	HAVANA	exon	31290381	31290566	.	+	.	gene_id "ENSMUSG00000099855.6"; transcript_id "ENSMUST00000190984.6"; gene_type "lincRNA"; gene_name "Gm28486"; transcript_type "lincRNA"; transcript_name "Gm28486-202"; exon_number 1; exon_id "ENSMUSE00001325315.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049212.1"; havana_transcript "OTTMUST00000125551.1";
mm10-chrY	HAVANA	exon	31291054	31291235	.	+	.	gene_id "ENSMUSG00000099855.6"; transcript_id "ENSMUST00000190984.6"; gene_type "lincRNA"; gene_name "Gm28486"; transcript_type "lincRNA"; transcript_name "Gm28486-202"; exon_number 2; exon_id "ENSMUSE00001321677.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049212.1"; havana_transcript "OTTMUST00000125551.1";
mm10-chrY	HAVANA	exon	31292674	31292742	.	+	.	gene_id "ENSMUSG00000099855.6"; transcript_id "ENSMUST00000190984.6"; gene_type "lincRNA"; gene_name "Gm28486"; transcript_type "lincRNA"; transcript_name "Gm28486-202"; exon_number 3; exon_id "ENSMUSE00001333704.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049212.1"; havana_transcript "OTTMUST00000125551.1";
mm10-chrY	HAVANA	transcript	31290381	31292742	.	+	.	gene_id "ENSMUSG00000099855.6"; transcript_id "ENSMUST00000188443.1"; gene_type "lincRNA"; gene_name "Gm28486"; transcript_type "lincRNA"; transcript_name "Gm28486-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049212.1"; havana_transcript "OTTMUST00000125552.1";
mm10-chrY	HAVANA	exon	31290381	31290566	.	+	.	gene_id "ENSMUSG00000099855.6"; transcript_id "ENSMUST00000188443.1"; gene_type "lincRNA"; gene_name "Gm28486"; transcript_type "lincRNA"; transcript_name "Gm28486-201"; exon_number 1; exon_id "ENSMUSE00001325315.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049212.1"; havana_transcript "OTTMUST00000125552.1";
mm10-chrY	HAVANA	exon	31291054	31291235	.	+	.	gene_id "ENSMUSG00000099855.6"; transcript_id "ENSMUST00000188443.1"; gene_type "lincRNA"; gene_name "Gm28486"; transcript_type "lincRNA"; transcript_name "Gm28486-201"; exon_number 2; exon_id "ENSMUSE00001321677.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049212.1"; havana_transcript "OTTMUST00000125552.1";
mm10-chrY	HAVANA	exon	31291962	31292145	.	+	.	gene_id "ENSMUSG00000099855.6"; transcript_id "ENSMUST00000188443.1"; gene_type "lincRNA"; gene_name "Gm28486"; transcript_type "lincRNA"; transcript_name "Gm28486-201"; exon_number 3; exon_id "ENSMUSE00001332796.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049212.1"; havana_transcript "OTTMUST00000125552.1";
mm10-chrY	HAVANA	exon	31292674	31292742	.	+	.	gene_id "ENSMUSG00000099855.6"; transcript_id "ENSMUST00000188443.1"; gene_type "lincRNA"; gene_name "Gm28486"; transcript_type "lincRNA"; transcript_name "Gm28486-201"; exon_number 4; exon_id "ENSMUSE00001333704.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049212.1"; havana_transcript "OTTMUST00000125552.1";
mm10-chrY	HAVANA	gene	31373417	31397818	.	+	.	gene_id "ENSMUSG00000094623.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21737"; level 2; havana_gene "OTTMUSG00000049213.1";
mm10-chrY	HAVANA	transcript	31373417	31397818	.	+	.	gene_id "ENSMUSG00000094623.2"; transcript_id "ENSMUST00000178112.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21737-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049213.1"; havana_transcript "OTTMUST00000125553.1";
mm10-chrY	HAVANA	exon	31373417	31373534	.	+	.	gene_id "ENSMUSG00000094623.2"; transcript_id "ENSMUST00000178112.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21737-201"; exon_number 1; exon_id "ENSMUSE00001068352.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049213.1"; havana_transcript "OTTMUST00000125553.1";
mm10-chrY	HAVANA	exon	31378843	31378909	.	+	.	gene_id "ENSMUSG00000094623.2"; transcript_id "ENSMUST00000178112.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21737-201"; exon_number 2; exon_id "ENSMUSE00001066078.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049213.1"; havana_transcript "OTTMUST00000125553.1";
mm10-chrY	HAVANA	exon	31379483	31379517	.	+	.	gene_id "ENSMUSG00000094623.2"; transcript_id "ENSMUST00000178112.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21737-201"; exon_number 3; exon_id "ENSMUSE00001088926.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049213.1"; havana_transcript "OTTMUST00000125553.1";
mm10-chrY	HAVANA	exon	31386530	31386596	.	+	.	gene_id "ENSMUSG00000094623.2"; transcript_id "ENSMUST00000178112.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21737-201"; exon_number 4; exon_id "ENSMUSE00001040523.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049213.1"; havana_transcript "OTTMUST00000125553.1";
mm10-chrY	HAVANA	exon	31387159	31387193	.	+	.	gene_id "ENSMUSG00000094623.2"; transcript_id "ENSMUST00000178112.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21737-201"; exon_number 5; exon_id "ENSMUSE00000987023.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049213.1"; havana_transcript "OTTMUST00000125553.1";
mm10-chrY	HAVANA	exon	31394337	31394454	.	+	.	gene_id "ENSMUSG00000094623.2"; transcript_id "ENSMUST00000178112.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21737-201"; exon_number 6; exon_id "ENSMUSE00001046302.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049213.1"; havana_transcript "OTTMUST00000125553.1";
mm10-chrY	HAVANA	exon	31395213	31395312	.	+	.	gene_id "ENSMUSG00000094623.2"; transcript_id "ENSMUST00000178112.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21737-201"; exon_number 7; exon_id "ENSMUSE00001075540.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049213.1"; havana_transcript "OTTMUST00000125553.1";
mm10-chrY	HAVANA	exon	31397336	31397432	.	+	.	gene_id "ENSMUSG00000094623.2"; transcript_id "ENSMUST00000178112.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21737-201"; exon_number 8; exon_id "ENSMUSE00001334135.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049213.1"; havana_transcript "OTTMUST00000125553.1";
mm10-chrY	HAVANA	exon	31397792	31397818	.	+	.	gene_id "ENSMUSG00000094623.2"; transcript_id "ENSMUST00000178112.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21737-201"; exon_number 9; exon_id "ENSMUSE00001327180.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049213.1"; havana_transcript "OTTMUST00000125553.1";
mm10-chrY	HAVANA	gene	31448706	31451937	.	+	.	gene_id "ENSMUSG00000100928.6"; gene_type "lincRNA"; gene_name "Gm28487"; level 2; havana_gene "OTTMUSG00000049214.1";
mm10-chrY	HAVANA	transcript	31448706	31451937	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000187894.6"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125554.1";
mm10-chrY	HAVANA	exon	31448706	31449344	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000187894.6"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-202"; exon_number 1; exon_id "ENSMUSE00001329822.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125554.1";
mm10-chrY	HAVANA	exon	31449829	31450011	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000187894.6"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-202"; exon_number 2; exon_id "ENSMUSE00001319708.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125554.1";
mm10-chrY	HAVANA	exon	31450740	31450920	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000187894.6"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-202"; exon_number 3; exon_id "ENSMUSE00001333445.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125554.1";
mm10-chrY	HAVANA	exon	31451448	31451937	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000187894.6"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-202"; exon_number 4; exon_id "ENSMUSE00001331336.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125554.1";
mm10-chrY	HAVANA	transcript	31449159	31451513	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000191522.6"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125555.1";
mm10-chrY	HAVANA	exon	31449159	31449344	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000191522.6"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-203"; exon_number 1; exon_id "ENSMUSE00001327848.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125555.1";
mm10-chrY	HAVANA	exon	31449833	31450011	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000191522.6"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-203"; exon_number 2; exon_id "ENSMUSE00001318897.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125555.1";
mm10-chrY	HAVANA	exon	31450740	31450920	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000191522.6"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-203"; exon_number 3; exon_id "ENSMUSE00001333445.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125555.1";
mm10-chrY	HAVANA	exon	31451448	31451513	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000191522.6"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-203"; exon_number 4; exon_id "ENSMUSE00001322949.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125555.1";
mm10-chrY	HAVANA	transcript	31449159	31451513	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000185292.1"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125556.1";
mm10-chrY	HAVANA	exon	31449159	31449344	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000185292.1"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-201"; exon_number 1; exon_id "ENSMUSE00001327848.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125556.1";
mm10-chrY	HAVANA	exon	31449833	31450011	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000185292.1"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-201"; exon_number 2; exon_id "ENSMUSE00001318897.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125556.1";
mm10-chrY	HAVANA	exon	31451448	31451513	.	+	.	gene_id "ENSMUSG00000100928.6"; transcript_id "ENSMUST00000185292.1"; gene_type "lincRNA"; gene_name "Gm28487"; transcript_type "lincRNA"; transcript_name "Gm28487-201"; exon_number 3; exon_id "ENSMUSE00001322949.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049214.1"; havana_transcript "OTTMUST00000125556.1";
mm10-chrY	HAVANA	gene	31464199	31467669	.	+	.	gene_id "ENSMUSG00000100384.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28489"; level 2; havana_gene "OTTMUSG00000049216.1";
mm10-chrY	HAVANA	transcript	31464199	31467669	.	+	.	gene_id "ENSMUSG00000100384.1"; transcript_id "ENSMUST00000186655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28489-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049216.1"; havana_transcript "OTTMUST00000125557.1";
mm10-chrY	HAVANA	exon	31464199	31464317	.	+	.	gene_id "ENSMUSG00000100384.1"; transcript_id "ENSMUST00000186655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28489-201"; exon_number 1; exon_id "ENSMUSE00001318010.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049216.1"; havana_transcript "OTTMUST00000125557.1";
mm10-chrY	HAVANA	exon	31465070	31465169	.	+	.	gene_id "ENSMUSG00000100384.1"; transcript_id "ENSMUST00000186655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28489-201"; exon_number 2; exon_id "ENSMUSE00001332462.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049216.1"; havana_transcript "OTTMUST00000125557.1";
mm10-chrY	HAVANA	exon	31467186	31467255	.	+	.	gene_id "ENSMUSG00000100384.1"; transcript_id "ENSMUST00000186655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28489-201"; exon_number 3; exon_id "ENSMUSE00001323448.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049216.1"; havana_transcript "OTTMUST00000125557.1";
mm10-chrY	HAVANA	exon	31467643	31467669	.	+	.	gene_id "ENSMUSG00000100384.1"; transcript_id "ENSMUST00000186655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28489-201"; exon_number 4; exon_id "ENSMUSE00001330396.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049216.1"; havana_transcript "OTTMUST00000125557.1";
mm10-chrY	HAVANA	gene	31509423	31512658	.	-	.	gene_id "ENSMUSG00000099695.6"; gene_type "lincRNA"; gene_name "Gm28488"; level 2; havana_gene "OTTMUSG00000049217.1";
mm10-chrY	HAVANA	transcript	31509423	31512658	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000188792.6"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125558.1";
mm10-chrY	HAVANA	exon	31512021	31512658	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000188792.6"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-203"; exon_number 1; exon_id "ENSMUSE00001319418.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125558.1";
mm10-chrY	HAVANA	exon	31511352	31511537	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000188792.6"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-203"; exon_number 2; exon_id "ENSMUSE00001329537.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125558.1";
mm10-chrY	HAVANA	exon	31510441	31510624	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000188792.6"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-203"; exon_number 3; exon_id "ENSMUSE00001324088.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125558.1";
mm10-chrY	HAVANA	exon	31509423	31509912	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000188792.6"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-203"; exon_number 4; exon_id "ENSMUSE00001319926.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125558.1";
mm10-chrY	HAVANA	transcript	31509844	31512206	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000186979.6"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125559.1";
mm10-chrY	HAVANA	exon	31512021	31512206	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000186979.6"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-202"; exon_number 1; exon_id "ENSMUSE00001318360.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125559.1";
mm10-chrY	HAVANA	exon	31511352	31511533	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000186979.6"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-202"; exon_number 2; exon_id "ENSMUSE00001318770.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125559.1";
mm10-chrY	HAVANA	exon	31510441	31510624	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000186979.6"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-202"; exon_number 3; exon_id "ENSMUSE00001324088.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125559.1";
mm10-chrY	HAVANA	exon	31509844	31509912	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000186979.6"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-202"; exon_number 4; exon_id "ENSMUSE00001335297.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125559.1";
mm10-chrY	HAVANA	transcript	31509844	31512206	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000185608.1"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125560.1";
mm10-chrY	HAVANA	exon	31512021	31512206	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000185608.1"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-201"; exon_number 1; exon_id "ENSMUSE00001318360.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125560.1";
mm10-chrY	HAVANA	exon	31511352	31511533	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000185608.1"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-201"; exon_number 2; exon_id "ENSMUSE00001318770.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125560.1";
mm10-chrY	HAVANA	exon	31509844	31509912	.	-	.	gene_id "ENSMUSG00000099695.6"; transcript_id "ENSMUST00000185608.1"; gene_type "lincRNA"; gene_name "Gm28488"; transcript_type "lincRNA"; transcript_name "Gm28488-201"; exon_number 3; exon_id "ENSMUSE00001335297.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049217.1"; havana_transcript "OTTMUST00000125560.1";
mm10-chrY	HAVANA	gene	31538338	31541570	.	-	.	gene_id "ENSMUSG00000100399.6"; gene_type "lincRNA"; gene_name "Gm28491"; level 2; havana_gene "OTTMUSG00000049218.1";
mm10-chrY	HAVANA	transcript	31538338	31541570	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000186902.6"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125561.1";
mm10-chrY	HAVANA	exon	31540932	31541570	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000186902.6"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-202"; exon_number 1; exon_id "ENSMUSE00001318919.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125561.1";
mm10-chrY	HAVANA	exon	31540265	31540447	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000186902.6"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-202"; exon_number 2; exon_id "ENSMUSE00001324338.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125561.1";
mm10-chrY	HAVANA	exon	31539355	31539535	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000186902.6"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-202"; exon_number 3; exon_id "ENSMUSE00001321256.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125561.1";
mm10-chrY	HAVANA	exon	31538338	31538827	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000186902.6"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-202"; exon_number 4; exon_id "ENSMUSE00001331608.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125561.1";
mm10-chrY	HAVANA	transcript	31538762	31541117	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000186753.6"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125562.1";
mm10-chrY	HAVANA	exon	31540932	31541117	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000186753.6"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-201"; exon_number 1; exon_id "ENSMUSE00001335376.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125562.1";
mm10-chrY	HAVANA	exon	31540265	31540443	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000186753.6"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-201"; exon_number 2; exon_id "ENSMUSE00001329462.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125562.1";
mm10-chrY	HAVANA	exon	31538762	31538827	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000186753.6"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-201"; exon_number 3; exon_id "ENSMUSE00001327979.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125562.1";
mm10-chrY	HAVANA	transcript	31538762	31541117	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000190076.1"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125563.1";
mm10-chrY	HAVANA	exon	31540932	31541117	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000190076.1"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-203"; exon_number 1; exon_id "ENSMUSE00001335376.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125563.1";
mm10-chrY	HAVANA	exon	31540265	31540443	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000190076.1"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-203"; exon_number 2; exon_id "ENSMUSE00001329462.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125563.1";
mm10-chrY	HAVANA	exon	31539355	31539535	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000190076.1"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-203"; exon_number 3; exon_id "ENSMUSE00001321256.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125563.1";
mm10-chrY	HAVANA	exon	31538762	31538827	.	-	.	gene_id "ENSMUSG00000100399.6"; transcript_id "ENSMUST00000190076.1"; gene_type "lincRNA"; gene_name "Gm28491"; transcript_type "lincRNA"; transcript_name "Gm28491-203"; exon_number 4; exon_id "ENSMUSE00001327979.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049218.1"; havana_transcript "OTTMUST00000125563.1";
mm10-chrY	HAVANA	gene	31602724	31634756	.	-	.	gene_id "ENSMUSG00000094789.7"; gene_type "protein_coding"; gene_name "Gm28490"; level 2; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	HAVANA	transcript	31602724	31634756	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	exon	31634713	31634756	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 1; exon_id "ENSMUSE00001331430.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	exon	31633216	31633347	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 2; exon_id "ENSMUSE00001325012.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	CDS	31633216	31633333	.	-	0	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 2; exon_id "ENSMUSE00001325012.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	start_codon	31633331	31633333	.	-	0	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 2; exon_id "ENSMUSE00001325012.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	exon	31621821	31621887	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 3; exon_id "ENSMUSE00001052349.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	CDS	31621821	31621887	.	-	2	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 3; exon_id "ENSMUSE00001052349.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	exon	31621236	31621270	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 4; exon_id "ENSMUSE00001047387.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	CDS	31621236	31621270	.	-	1	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 4; exon_id "ENSMUSE00001047387.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	exon	31614136	31614202	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 5; exon_id "ENSMUSE00001044520.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	CDS	31614136	31614202	.	-	2	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 5; exon_id "ENSMUSE00001044520.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	exon	31613537	31613571	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 6; exon_id "ENSMUSE00001088220.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	CDS	31613537	31613571	.	-	1	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 6; exon_id "ENSMUSE00001088220.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	exon	31606281	31606398	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 7; exon_id "ENSMUSE00001023244.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	CDS	31606281	31606398	.	-	2	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 7; exon_id "ENSMUSE00001023244.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	exon	31605430	31605529	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 8; exon_id "ENSMUSE00001321594.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	CDS	31605430	31605529	.	-	1	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 8; exon_id "ENSMUSE00001321594.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	exon	31603315	31603413	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 9; exon_id "ENSMUSE00001329323.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	CDS	31603315	31603413	.	-	0	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 9; exon_id "ENSMUSE00001329323.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	exon	31602724	31602956	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 10; exon_id "ENSMUSE00001324954.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	CDS	31602930	31602956	.	-	0	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 10; exon_id "ENSMUSE00001324954.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	stop_codon	31602927	31602929	.	-	0	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 10; exon_id "ENSMUSE00001324954.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	UTR	31634713	31634756	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 1; exon_id "ENSMUSE00001331430.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	UTR	31633334	31633347	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 2; exon_id "ENSMUSE00001325012.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	HAVANA	UTR	31602724	31602929	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000190946.6"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-202"; exon_number 10; exon_id "ENSMUSE00001324954.1"; level 2; protein_id "ENSMUSP00000140770.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049219.1"; havana_transcript "OTTMUST00000125564.1";
mm10-chrY	ENSEMBL	transcript	31605463	31633324	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	exon	31633216	31633324	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 1; exon_id "ENSMUSE00001074809.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	CDS	31633216	31633324	.	-	0	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 1; exon_id "ENSMUSE00001074809.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	start_codon	31633322	31633324	.	-	0	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 1; exon_id "ENSMUSE00001074809.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	exon	31621821	31621887	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 2; exon_id "ENSMUSE00001052349.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	CDS	31621821	31621887	.	-	2	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 2; exon_id "ENSMUSE00001052349.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	exon	31621236	31621270	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 3; exon_id "ENSMUSE00001047387.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	CDS	31621236	31621270	.	-	1	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 3; exon_id "ENSMUSE00001047387.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	exon	31614136	31614202	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 4; exon_id "ENSMUSE00001044520.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	CDS	31614136	31614202	.	-	2	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 4; exon_id "ENSMUSE00001044520.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	exon	31613537	31613571	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 5; exon_id "ENSMUSE00001088220.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	CDS	31613537	31613571	.	-	1	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 5; exon_id "ENSMUSE00001088220.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	exon	31606281	31606398	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 6; exon_id "ENSMUSE00001023244.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	CDS	31606281	31606398	.	-	2	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 6; exon_id "ENSMUSE00001023244.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	exon	31605463	31605529	.	-	.	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 7; exon_id "ENSMUSE00001069085.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	ENSEMBL	CDS	31605463	31605529	.	-	1	gene_id "ENSMUSG00000094789.7"; transcript_id "ENSMUST00000179076.1"; gene_type "protein_coding"; gene_name "Gm28490"; transcript_type "protein_coding"; transcript_name "Gm28490-201"; exon_number 7; exon_id "ENSMUSE00001069085.1"; level 3; protein_id "ENSMUSP00000136022.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049219.1";
mm10-chrY	HAVANA	gene	31735963	31736490	.	-	.	gene_id "ENSMUSG00000094444.2"; gene_type "lincRNA"; gene_name "Gm21562"; level 2; havana_gene "OTTMUSG00000049220.1";
mm10-chrY	HAVANA	transcript	31735963	31736490	.	-	.	gene_id "ENSMUSG00000094444.2"; transcript_id "ENSMUST00000190314.1"; gene_type "lincRNA"; gene_name "Gm21562"; transcript_type "lincRNA"; transcript_name "Gm21562-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049220.1"; havana_transcript "OTTMUST00000125565.1";
mm10-chrY	HAVANA	exon	31736386	31736490	.	-	.	gene_id "ENSMUSG00000094444.2"; transcript_id "ENSMUST00000190314.1"; gene_type "lincRNA"; gene_name "Gm21562"; transcript_type "lincRNA"; transcript_name "Gm21562-202"; exon_number 1; exon_id "ENSMUSE00001332760.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049220.1"; havana_transcript "OTTMUST00000125565.1";
mm10-chrY	HAVANA	exon	31735963	31736031	.	-	.	gene_id "ENSMUSG00000094444.2"; transcript_id "ENSMUST00000190314.1"; gene_type "lincRNA"; gene_name "Gm21562"; transcript_type "lincRNA"; transcript_name "Gm21562-202"; exon_number 2; exon_id "ENSMUSE00001324378.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049220.1"; havana_transcript "OTTMUST00000125565.1";
mm10-chrY	ENSEMBL	transcript	31735987	31736484	.	-	.	gene_id "ENSMUSG00000094444.2"; transcript_id "ENSMUST00000177888.1"; gene_type "lincRNA"; gene_name "Gm21562"; transcript_type "lincRNA"; transcript_name "Gm21562-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049220.1";
mm10-chrY	ENSEMBL	exon	31735987	31736484	.	-	.	gene_id "ENSMUSG00000094444.2"; transcript_id "ENSMUST00000177888.1"; gene_type "lincRNA"; gene_name "Gm21562"; transcript_type "lincRNA"; transcript_name "Gm21562-201"; exon_number 1; exon_id "ENSMUSE00000980580.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049220.1";
mm10-chrY	HAVANA	gene	31777538	31779902	.	-	.	gene_id "ENSMUSG00000101423.6"; gene_type "lincRNA"; gene_name "Gm28298"; level 2; havana_gene "OTTMUSG00000049242.1";
mm10-chrY	HAVANA	transcript	31777538	31779902	.	-	.	gene_id "ENSMUSG00000101423.6"; transcript_id "ENSMUST00000190443.6"; gene_type "lincRNA"; gene_name "Gm28298"; transcript_type "lincRNA"; transcript_name "Gm28298-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049242.1"; havana_transcript "OTTMUST00000125594.1";
mm10-chrY	HAVANA	exon	31779717	31779902	.	-	.	gene_id "ENSMUSG00000101423.6"; transcript_id "ENSMUST00000190443.6"; gene_type "lincRNA"; gene_name "Gm28298"; transcript_type "lincRNA"; transcript_name "Gm28298-202"; exon_number 1; exon_id "ENSMUSE00001320885.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049242.1"; havana_transcript "OTTMUST00000125594.1";
mm10-chrY	HAVANA	exon	31779048	31779229	.	-	.	gene_id "ENSMUSG00000101423.6"; transcript_id "ENSMUST00000190443.6"; gene_type "lincRNA"; gene_name "Gm28298"; transcript_type "lincRNA"; transcript_name "Gm28298-202"; exon_number 2; exon_id "ENSMUSE00001326835.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049242.1"; havana_transcript "OTTMUST00000125594.1";
mm10-chrY	HAVANA	exon	31777538	31777606	.	-	.	gene_id "ENSMUSG00000101423.6"; transcript_id "ENSMUST00000190443.6"; gene_type "lincRNA"; gene_name "Gm28298"; transcript_type "lincRNA"; transcript_name "Gm28298-202"; exon_number 3; exon_id "ENSMUSE00001327153.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049242.1"; havana_transcript "OTTMUST00000125594.1";
mm10-chrY	HAVANA	transcript	31777538	31779902	.	-	.	gene_id "ENSMUSG00000101423.6"; transcript_id "ENSMUST00000185287.1"; gene_type "lincRNA"; gene_name "Gm28298"; transcript_type "lincRNA"; transcript_name "Gm28298-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049242.1"; havana_transcript "OTTMUST00000125595.1";
mm10-chrY	HAVANA	exon	31779717	31779902	.	-	.	gene_id "ENSMUSG00000101423.6"; transcript_id "ENSMUST00000185287.1"; gene_type "lincRNA"; gene_name "Gm28298"; transcript_type "lincRNA"; transcript_name "Gm28298-201"; exon_number 1; exon_id "ENSMUSE00001320885.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049242.1"; havana_transcript "OTTMUST00000125595.1";
mm10-chrY	HAVANA	exon	31779048	31779229	.	-	.	gene_id "ENSMUSG00000101423.6"; transcript_id "ENSMUST00000185287.1"; gene_type "lincRNA"; gene_name "Gm28298"; transcript_type "lincRNA"; transcript_name "Gm28298-201"; exon_number 2; exon_id "ENSMUSE00001326835.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049242.1"; havana_transcript "OTTMUST00000125595.1";
mm10-chrY	HAVANA	exon	31778135	31778319	.	-	.	gene_id "ENSMUSG00000101423.6"; transcript_id "ENSMUST00000185287.1"; gene_type "lincRNA"; gene_name "Gm28298"; transcript_type "lincRNA"; transcript_name "Gm28298-201"; exon_number 3; exon_id "ENSMUSE00001330997.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049242.1"; havana_transcript "OTTMUST00000125595.1";
mm10-chrY	HAVANA	exon	31777538	31777606	.	-	.	gene_id "ENSMUSG00000101423.6"; transcript_id "ENSMUST00000185287.1"; gene_type "lincRNA"; gene_name "Gm28298"; transcript_type "lincRNA"; transcript_name "Gm28298-201"; exon_number 4; exon_id "ENSMUSE00001327153.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049242.1"; havana_transcript "OTTMUST00000125595.1";
mm10-chrY	HAVANA	gene	31802210	31802737	.	-	.	gene_id "ENSMUSG00000095626.2"; gene_type "lincRNA"; gene_name "Gm21572"; level 2; havana_gene "OTTMUSG00000049243.1";
mm10-chrY	HAVANA	transcript	31802210	31802737	.	-	.	gene_id "ENSMUSG00000095626.2"; transcript_id "ENSMUST00000186850.1"; gene_type "lincRNA"; gene_name "Gm21572"; transcript_type "lincRNA"; transcript_name "Gm21572-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049243.1"; havana_transcript "OTTMUST00000125596.1";
mm10-chrY	HAVANA	exon	31802633	31802737	.	-	.	gene_id "ENSMUSG00000095626.2"; transcript_id "ENSMUST00000186850.1"; gene_type "lincRNA"; gene_name "Gm21572"; transcript_type "lincRNA"; transcript_name "Gm21572-202"; exon_number 1; exon_id "ENSMUSE00001319071.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049243.1"; havana_transcript "OTTMUST00000125596.1";
mm10-chrY	HAVANA	exon	31802210	31802278	.	-	.	gene_id "ENSMUSG00000095626.2"; transcript_id "ENSMUST00000186850.1"; gene_type "lincRNA"; gene_name "Gm21572"; transcript_type "lincRNA"; transcript_name "Gm21572-202"; exon_number 2; exon_id "ENSMUSE00001332778.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049243.1"; havana_transcript "OTTMUST00000125596.1";
mm10-chrY	ENSEMBL	transcript	31802234	31802731	.	-	.	gene_id "ENSMUSG00000095626.2"; transcript_id "ENSMUST00000180134.1"; gene_type "lincRNA"; gene_name "Gm21572"; transcript_type "lincRNA"; transcript_name "Gm21572-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049243.1";
mm10-chrY	ENSEMBL	exon	31802234	31802731	.	-	.	gene_id "ENSMUSG00000095626.2"; transcript_id "ENSMUST00000180134.1"; gene_type "lincRNA"; gene_name "Gm21572"; transcript_type "lincRNA"; transcript_name "Gm21572-201"; exon_number 1; exon_id "ENSMUSE00001015515.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049243.1";
mm10-chrY	HAVANA	gene	31840012	31842290	.	-	.	gene_id "ENSMUSG00000101761.6"; gene_type "lincRNA"; gene_name "Gm28297"; level 2; havana_gene "OTTMUSG00000049244.1";
mm10-chrY	HAVANA	transcript	31840012	31842290	.	-	.	gene_id "ENSMUSG00000101761.6"; transcript_id "ENSMUST00000190933.6"; gene_type "lincRNA"; gene_name "Gm28297"; transcript_type "lincRNA"; transcript_name "Gm28297-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049244.1"; havana_transcript "OTTMUST00000125597.1";
mm10-chrY	HAVANA	exon	31842190	31842290	.	-	.	gene_id "ENSMUSG00000101761.6"; transcript_id "ENSMUST00000190933.6"; gene_type "lincRNA"; gene_name "Gm28297"; transcript_type "lincRNA"; transcript_name "Gm28297-202"; exon_number 1; exon_id "ENSMUSE00001326287.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049244.1"; havana_transcript "OTTMUST00000125597.1";
mm10-chrY	HAVANA	exon	31841521	31841702	.	-	.	gene_id "ENSMUSG00000101761.6"; transcript_id "ENSMUST00000190933.6"; gene_type "lincRNA"; gene_name "Gm28297"; transcript_type "lincRNA"; transcript_name "Gm28297-202"; exon_number 2; exon_id "ENSMUSE00001319749.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049244.1"; havana_transcript "OTTMUST00000125597.1";
mm10-chrY	HAVANA	exon	31840012	31840080	.	-	.	gene_id "ENSMUSG00000101761.6"; transcript_id "ENSMUST00000190933.6"; gene_type "lincRNA"; gene_name "Gm28297"; transcript_type "lincRNA"; transcript_name "Gm28297-202"; exon_number 3; exon_id "ENSMUSE00001329645.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049244.1"; havana_transcript "OTTMUST00000125597.1";
mm10-chrY	HAVANA	transcript	31840012	31842290	.	-	.	gene_id "ENSMUSG00000101761.6"; transcript_id "ENSMUST00000186679.1"; gene_type "lincRNA"; gene_name "Gm28297"; transcript_type "lincRNA"; transcript_name "Gm28297-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049244.1"; havana_transcript "OTTMUST00000125598.1";
mm10-chrY	HAVANA	exon	31842190	31842290	.	-	.	gene_id "ENSMUSG00000101761.6"; transcript_id "ENSMUST00000186679.1"; gene_type "lincRNA"; gene_name "Gm28297"; transcript_type "lincRNA"; transcript_name "Gm28297-201"; exon_number 1; exon_id "ENSMUSE00001326287.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049244.1"; havana_transcript "OTTMUST00000125598.1";
mm10-chrY	HAVANA	exon	31841521	31841702	.	-	.	gene_id "ENSMUSG00000101761.6"; transcript_id "ENSMUST00000186679.1"; gene_type "lincRNA"; gene_name "Gm28297"; transcript_type "lincRNA"; transcript_name "Gm28297-201"; exon_number 2; exon_id "ENSMUSE00001319749.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049244.1"; havana_transcript "OTTMUST00000125598.1";
mm10-chrY	HAVANA	exon	31840608	31840792	.	-	.	gene_id "ENSMUSG00000101761.6"; transcript_id "ENSMUST00000186679.1"; gene_type "lincRNA"; gene_name "Gm28297"; transcript_type "lincRNA"; transcript_name "Gm28297-201"; exon_number 3; exon_id "ENSMUSE00001323913.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049244.1"; havana_transcript "OTTMUST00000125598.1";
mm10-chrY	HAVANA	exon	31840012	31840080	.	-	.	gene_id "ENSMUSG00000101761.6"; transcript_id "ENSMUST00000186679.1"; gene_type "lincRNA"; gene_name "Gm28297"; transcript_type "lincRNA"; transcript_name "Gm28297-201"; exon_number 4; exon_id "ENSMUSE00001329645.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049244.1"; havana_transcript "OTTMUST00000125598.1";
mm10-chrY	HAVANA	gene	32124404	32125099	.	-	.	gene_id "ENSMUSG00000099493.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21753"; level 2; havana_gene "OTTMUSG00000049245.1";
mm10-chrY	HAVANA	transcript	32124404	32125099	.	-	.	gene_id "ENSMUSG00000099493.1"; transcript_id "ENSMUST00000187240.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21753"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21753-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049245.1"; havana_transcript "OTTMUST00000125599.1";
mm10-chrY	HAVANA	exon	32124404	32125099	.	-	.	gene_id "ENSMUSG00000099493.1"; transcript_id "ENSMUST00000187240.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21753"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21753-201"; exon_number 1; exon_id "ENSMUSE00001326466.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049245.1"; havana_transcript "OTTMUST00000125599.1";
mm10-chrY	HAVANA	gene	32159839	32160366	.	+	.	gene_id "ENSMUSG00000096777.2"; gene_type "lincRNA"; gene_name "Gm21723"; level 2; havana_gene "OTTMUSG00000049246.1";
mm10-chrY	HAVANA	transcript	32159839	32160366	.	+	.	gene_id "ENSMUSG00000096777.2"; transcript_id "ENSMUST00000189444.1"; gene_type "lincRNA"; gene_name "Gm21723"; transcript_type "lincRNA"; transcript_name "Gm21723-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049246.1"; havana_transcript "OTTMUST00000125600.1";
mm10-chrY	HAVANA	exon	32159839	32159943	.	+	.	gene_id "ENSMUSG00000096777.2"; transcript_id "ENSMUST00000189444.1"; gene_type "lincRNA"; gene_name "Gm21723"; transcript_type "lincRNA"; transcript_name "Gm21723-202"; exon_number 1; exon_id "ENSMUSE00001331130.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049246.1"; havana_transcript "OTTMUST00000125600.1";
mm10-chrY	HAVANA	exon	32160298	32160366	.	+	.	gene_id "ENSMUSG00000096777.2"; transcript_id "ENSMUST00000189444.1"; gene_type "lincRNA"; gene_name "Gm21723"; transcript_type "lincRNA"; transcript_name "Gm21723-202"; exon_number 2; exon_id "ENSMUSE00001335504.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049246.1"; havana_transcript "OTTMUST00000125600.1";
mm10-chrY	ENSEMBL	transcript	32159845	32160342	.	+	.	gene_id "ENSMUSG00000096777.2"; transcript_id "ENSMUST00000178692.1"; gene_type "lincRNA"; gene_name "Gm21723"; transcript_type "lincRNA"; transcript_name "Gm21723-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049246.1";
mm10-chrY	ENSEMBL	exon	32159845	32160342	.	+	.	gene_id "ENSMUSG00000096777.2"; transcript_id "ENSMUST00000178692.1"; gene_type "lincRNA"; gene_name "Gm21723"; transcript_type "lincRNA"; transcript_name "Gm21723-201"; exon_number 1; exon_id "ENSMUSE00001019685.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049246.1";
mm10-chrY	HAVANA	gene	32181634	32183997	.	+	.	gene_id "ENSMUSG00000100739.6"; gene_type "lincRNA"; gene_name "Gm28296"; level 2; havana_gene "OTTMUSG00000049247.2";
mm10-chrY	HAVANA	transcript	32181634	32183997	.	+	.	gene_id "ENSMUSG00000100739.6"; transcript_id "ENSMUST00000186151.6"; gene_type "lincRNA"; gene_name "Gm28296"; transcript_type "lincRNA"; transcript_name "Gm28296-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049247.2"; havana_transcript "OTTMUST00000125975.1";
mm10-chrY	HAVANA	exon	32181634	32181819	.	+	.	gene_id "ENSMUSG00000100739.6"; transcript_id "ENSMUST00000186151.6"; gene_type "lincRNA"; gene_name "Gm28296"; transcript_type "lincRNA"; transcript_name "Gm28296-202"; exon_number 1; exon_id "ENSMUSE00001333094.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049247.2"; havana_transcript "OTTMUST00000125975.1";
mm10-chrY	HAVANA	exon	32182307	32182488	.	+	.	gene_id "ENSMUSG00000100739.6"; transcript_id "ENSMUST00000186151.6"; gene_type "lincRNA"; gene_name "Gm28296"; transcript_type "lincRNA"; transcript_name "Gm28296-202"; exon_number 2; exon_id "ENSMUSE00001325358.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049247.2"; havana_transcript "OTTMUST00000125975.1";
mm10-chrY	HAVANA	exon	32183216	32183400	.	+	.	gene_id "ENSMUSG00000100739.6"; transcript_id "ENSMUST00000186151.6"; gene_type "lincRNA"; gene_name "Gm28296"; transcript_type "lincRNA"; transcript_name "Gm28296-202"; exon_number 3; exon_id "ENSMUSE00001330597.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049247.2"; havana_transcript "OTTMUST00000125975.1";
mm10-chrY	HAVANA	exon	32183929	32183997	.	+	.	gene_id "ENSMUSG00000100739.6"; transcript_id "ENSMUST00000186151.6"; gene_type "lincRNA"; gene_name "Gm28296"; transcript_type "lincRNA"; transcript_name "Gm28296-202"; exon_number 4; exon_id "ENSMUSE00001332479.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049247.2"; havana_transcript "OTTMUST00000125975.1";
mm10-chrY	HAVANA	transcript	32181634	32183997	.	+	.	gene_id "ENSMUSG00000100739.6"; transcript_id "ENSMUST00000185585.1"; gene_type "lincRNA"; gene_name "Gm28296"; transcript_type "lincRNA"; transcript_name "Gm28296-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049247.2"; havana_transcript "OTTMUST00000125601.1";
mm10-chrY	HAVANA	exon	32181634	32181819	.	+	.	gene_id "ENSMUSG00000100739.6"; transcript_id "ENSMUST00000185585.1"; gene_type "lincRNA"; gene_name "Gm28296"; transcript_type "lincRNA"; transcript_name "Gm28296-201"; exon_number 1; exon_id "ENSMUSE00001333094.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049247.2"; havana_transcript "OTTMUST00000125601.1";
mm10-chrY	HAVANA	exon	32182307	32182488	.	+	.	gene_id "ENSMUSG00000100739.6"; transcript_id "ENSMUST00000185585.1"; gene_type "lincRNA"; gene_name "Gm28296"; transcript_type "lincRNA"; transcript_name "Gm28296-201"; exon_number 2; exon_id "ENSMUSE00001325358.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049247.2"; havana_transcript "OTTMUST00000125601.1";
mm10-chrY	HAVANA	exon	32183929	32183997	.	+	.	gene_id "ENSMUSG00000100739.6"; transcript_id "ENSMUST00000185585.1"; gene_type "lincRNA"; gene_name "Gm28296"; transcript_type "lincRNA"; transcript_name "Gm28296-201"; exon_number 3; exon_id "ENSMUSE00001332479.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049247.2"; havana_transcript "OTTMUST00000125601.1";
mm10-chrY	HAVANA	gene	32221119	32221647	.	+	.	gene_id "ENSMUSG00000095345.2"; gene_type "lincRNA"; gene_name "Gm21821"; level 2; havana_gene "OTTMUSG00000049248.1";
mm10-chrY	HAVANA	transcript	32221119	32221647	.	+	.	gene_id "ENSMUSG00000095345.2"; transcript_id "ENSMUST00000187288.1"; gene_type "lincRNA"; gene_name "Gm21821"; transcript_type "lincRNA"; transcript_name "Gm21821-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049248.1"; havana_transcript "OTTMUST00000125603.1";
mm10-chrY	HAVANA	exon	32221119	32221223	.	+	.	gene_id "ENSMUSG00000095345.2"; transcript_id "ENSMUST00000187288.1"; gene_type "lincRNA"; gene_name "Gm21821"; transcript_type "lincRNA"; transcript_name "Gm21821-202"; exon_number 1; exon_id "ENSMUSE00001318330.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049248.1"; havana_transcript "OTTMUST00000125603.1";
mm10-chrY	HAVANA	exon	32221578	32221647	.	+	.	gene_id "ENSMUSG00000095345.2"; transcript_id "ENSMUST00000187288.1"; gene_type "lincRNA"; gene_name "Gm21821"; transcript_type "lincRNA"; transcript_name "Gm21821-202"; exon_number 2; exon_id "ENSMUSE00001322241.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049248.1"; havana_transcript "OTTMUST00000125603.1";
mm10-chrY	ENSEMBL	transcript	32221125	32221622	.	+	.	gene_id "ENSMUSG00000095345.2"; transcript_id "ENSMUST00000179646.1"; gene_type "lincRNA"; gene_name "Gm21821"; transcript_type "lincRNA"; transcript_name "Gm21821-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049248.1";
mm10-chrY	ENSEMBL	exon	32221125	32221622	.	+	.	gene_id "ENSMUSG00000095345.2"; transcript_id "ENSMUST00000179646.1"; gene_type "lincRNA"; gene_name "Gm21821"; transcript_type "lincRNA"; transcript_name "Gm21821-201"; exon_number 1; exon_id "ENSMUSE00000977625.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049248.1";
mm10-chrY	HAVANA	gene	32244058	32246421	.	+	.	gene_id "ENSMUSG00000100709.6"; gene_type "lincRNA"; gene_name "Gm28295"; level 2; havana_gene "OTTMUSG00000049249.1";
mm10-chrY	HAVANA	transcript	32244058	32246421	.	+	.	gene_id "ENSMUSG00000100709.6"; transcript_id "ENSMUST00000188322.6"; gene_type "lincRNA"; gene_name "Gm28295"; transcript_type "lincRNA"; transcript_name "Gm28295-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049249.1"; havana_transcript "OTTMUST00000125604.1";
mm10-chrY	HAVANA	exon	32244058	32244243	.	+	.	gene_id "ENSMUSG00000100709.6"; transcript_id "ENSMUST00000188322.6"; gene_type "lincRNA"; gene_name "Gm28295"; transcript_type "lincRNA"; transcript_name "Gm28295-201"; exon_number 1; exon_id "ENSMUSE00001319050.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049249.1"; havana_transcript "OTTMUST00000125604.1";
mm10-chrY	HAVANA	exon	32244731	32244912	.	+	.	gene_id "ENSMUSG00000100709.6"; transcript_id "ENSMUST00000188322.6"; gene_type "lincRNA"; gene_name "Gm28295"; transcript_type "lincRNA"; transcript_name "Gm28295-201"; exon_number 2; exon_id "ENSMUSE00001327786.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049249.1"; havana_transcript "OTTMUST00000125604.1";
mm10-chrY	HAVANA	exon	32245640	32245824	.	+	.	gene_id "ENSMUSG00000100709.6"; transcript_id "ENSMUST00000188322.6"; gene_type "lincRNA"; gene_name "Gm28295"; transcript_type "lincRNA"; transcript_name "Gm28295-201"; exon_number 3; exon_id "ENSMUSE00001324139.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049249.1"; havana_transcript "OTTMUST00000125604.1";
mm10-chrY	HAVANA	exon	32246353	32246421	.	+	.	gene_id "ENSMUSG00000100709.6"; transcript_id "ENSMUST00000188322.6"; gene_type "lincRNA"; gene_name "Gm28295"; transcript_type "lincRNA"; transcript_name "Gm28295-201"; exon_number 4; exon_id "ENSMUSE00001329489.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049249.1"; havana_transcript "OTTMUST00000125604.1";
mm10-chrY	HAVANA	transcript	32244058	32246421	.	+	.	gene_id "ENSMUSG00000100709.6"; transcript_id "ENSMUST00000190203.1"; gene_type "lincRNA"; gene_name "Gm28295"; transcript_type "lincRNA"; transcript_name "Gm28295-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049249.1"; havana_transcript "OTTMUST00000125605.1";
mm10-chrY	HAVANA	exon	32244058	32244243	.	+	.	gene_id "ENSMUSG00000100709.6"; transcript_id "ENSMUST00000190203.1"; gene_type "lincRNA"; gene_name "Gm28295"; transcript_type "lincRNA"; transcript_name "Gm28295-202"; exon_number 1; exon_id "ENSMUSE00001319050.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049249.1"; havana_transcript "OTTMUST00000125605.1";
mm10-chrY	HAVANA	exon	32244731	32244912	.	+	.	gene_id "ENSMUSG00000100709.6"; transcript_id "ENSMUST00000190203.1"; gene_type "lincRNA"; gene_name "Gm28295"; transcript_type "lincRNA"; transcript_name "Gm28295-202"; exon_number 2; exon_id "ENSMUSE00001327786.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049249.1"; havana_transcript "OTTMUST00000125605.1";
mm10-chrY	HAVANA	exon	32246353	32246421	.	+	.	gene_id "ENSMUSG00000100709.6"; transcript_id "ENSMUST00000190203.1"; gene_type "lincRNA"; gene_name "Gm28295"; transcript_type "lincRNA"; transcript_name "Gm28295-202"; exon_number 3; exon_id "ENSMUSE00001329489.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049249.1"; havana_transcript "OTTMUST00000125605.1";
mm10-chrY	HAVANA	gene	32283539	32284066	.	+	.	gene_id "ENSMUSG00000095968.2"; gene_type "lincRNA"; gene_name "Gm21842"; level 2; havana_gene "OTTMUSG00000049148.1";
mm10-chrY	HAVANA	transcript	32283539	32284066	.	+	.	gene_id "ENSMUSG00000095968.2"; transcript_id "ENSMUST00000185311.1"; gene_type "lincRNA"; gene_name "Gm21842"; transcript_type "lincRNA"; transcript_name "Gm21842-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049148.1"; havana_transcript "OTTMUST00000125433.1";
mm10-chrY	HAVANA	exon	32283539	32283643	.	+	.	gene_id "ENSMUSG00000095968.2"; transcript_id "ENSMUST00000185311.1"; gene_type "lincRNA"; gene_name "Gm21842"; transcript_type "lincRNA"; transcript_name "Gm21842-202"; exon_number 1; exon_id "ENSMUSE00001331395.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049148.1"; havana_transcript "OTTMUST00000125433.1";
mm10-chrY	HAVANA	exon	32283998	32284066	.	+	.	gene_id "ENSMUSG00000095968.2"; transcript_id "ENSMUST00000185311.1"; gene_type "lincRNA"; gene_name "Gm21842"; transcript_type "lincRNA"; transcript_name "Gm21842-202"; exon_number 2; exon_id "ENSMUSE00001327707.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049148.1"; havana_transcript "OTTMUST00000125433.1";
mm10-chrY	ENSEMBL	transcript	32283545	32284042	.	+	.	gene_id "ENSMUSG00000095968.2"; transcript_id "ENSMUST00000177552.1"; gene_type "lincRNA"; gene_name "Gm21842"; transcript_type "lincRNA"; transcript_name "Gm21842-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049148.1";
mm10-chrY	ENSEMBL	exon	32283545	32284042	.	+	.	gene_id "ENSMUSG00000095968.2"; transcript_id "ENSMUST00000177552.1"; gene_type "lincRNA"; gene_name "Gm21842"; transcript_type "lincRNA"; transcript_name "Gm21842-201"; exon_number 1; exon_id "ENSMUSE00001020308.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049148.1";
mm10-chrY	HAVANA	gene	32305046	32307409	.	+	.	gene_id "ENSMUSG00000101779.6"; gene_type "lincRNA"; gene_name "Gm28170"; level 2; havana_gene "OTTMUSG00000049149.1";
mm10-chrY	HAVANA	transcript	32305046	32307409	.	+	.	gene_id "ENSMUSG00000101779.6"; transcript_id "ENSMUST00000186892.6"; gene_type "lincRNA"; gene_name "Gm28170"; transcript_type "lincRNA"; transcript_name "Gm28170-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049149.1"; havana_transcript "OTTMUST00000125434.1";
mm10-chrY	HAVANA	exon	32305046	32305231	.	+	.	gene_id "ENSMUSG00000101779.6"; transcript_id "ENSMUST00000186892.6"; gene_type "lincRNA"; gene_name "Gm28170"; transcript_type "lincRNA"; transcript_name "Gm28170-201"; exon_number 1; exon_id "ENSMUSE00001333018.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049149.1"; havana_transcript "OTTMUST00000125434.1";
mm10-chrY	HAVANA	exon	32305719	32305900	.	+	.	gene_id "ENSMUSG00000101779.6"; transcript_id "ENSMUST00000186892.6"; gene_type "lincRNA"; gene_name "Gm28170"; transcript_type "lincRNA"; transcript_name "Gm28170-201"; exon_number 2; exon_id "ENSMUSE00001323440.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049149.1"; havana_transcript "OTTMUST00000125434.1";
mm10-chrY	HAVANA	exon	32306628	32306812	.	+	.	gene_id "ENSMUSG00000101779.6"; transcript_id "ENSMUST00000186892.6"; gene_type "lincRNA"; gene_name "Gm28170"; transcript_type "lincRNA"; transcript_name "Gm28170-201"; exon_number 3; exon_id "ENSMUSE00001335490.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049149.1"; havana_transcript "OTTMUST00000125434.1";
mm10-chrY	HAVANA	exon	32307341	32307409	.	+	.	gene_id "ENSMUSG00000101779.6"; transcript_id "ENSMUST00000186892.6"; gene_type "lincRNA"; gene_name "Gm28170"; transcript_type "lincRNA"; transcript_name "Gm28170-201"; exon_number 4; exon_id "ENSMUSE00001324258.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049149.1"; havana_transcript "OTTMUST00000125434.1";
mm10-chrY	HAVANA	transcript	32305046	32307409	.	+	.	gene_id "ENSMUSG00000101779.6"; transcript_id "ENSMUST00000187851.1"; gene_type "lincRNA"; gene_name "Gm28170"; transcript_type "lincRNA"; transcript_name "Gm28170-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049149.1"; havana_transcript "OTTMUST00000125435.1";
mm10-chrY	HAVANA	exon	32305046	32305231	.	+	.	gene_id "ENSMUSG00000101779.6"; transcript_id "ENSMUST00000187851.1"; gene_type "lincRNA"; gene_name "Gm28170"; transcript_type "lincRNA"; transcript_name "Gm28170-202"; exon_number 1; exon_id "ENSMUSE00001333018.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049149.1"; havana_transcript "OTTMUST00000125435.1";
mm10-chrY	HAVANA	exon	32305719	32305900	.	+	.	gene_id "ENSMUSG00000101779.6"; transcript_id "ENSMUST00000187851.1"; gene_type "lincRNA"; gene_name "Gm28170"; transcript_type "lincRNA"; transcript_name "Gm28170-202"; exon_number 2; exon_id "ENSMUSE00001323440.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049149.1"; havana_transcript "OTTMUST00000125435.1";
mm10-chrY	HAVANA	exon	32307341	32307409	.	+	.	gene_id "ENSMUSG00000101779.6"; transcript_id "ENSMUST00000187851.1"; gene_type "lincRNA"; gene_name "Gm28170"; transcript_type "lincRNA"; transcript_name "Gm28170-202"; exon_number 3; exon_id "ENSMUSE00001324258.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049149.1"; havana_transcript "OTTMUST00000125435.1";
mm10-chrY	HAVANA	gene	32380225	32404629	.	+	.	gene_id "ENSMUSG00000094529.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21744"; level 2; havana_gene "OTTMUSG00000049150.1";
mm10-chrY	HAVANA	transcript	32380225	32404629	.	+	.	gene_id "ENSMUSG00000094529.2"; transcript_id "ENSMUST00000178403.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21744"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21744-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049150.1"; havana_transcript "OTTMUST00000125436.1";
mm10-chrY	HAVANA	exon	32380225	32380342	.	+	.	gene_id "ENSMUSG00000094529.2"; transcript_id "ENSMUST00000178403.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21744"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21744-201"; exon_number 1; exon_id "ENSMUSE00000971203.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049150.1"; havana_transcript "OTTMUST00000125436.1";
mm10-chrY	HAVANA	exon	32385649	32385715	.	+	.	gene_id "ENSMUSG00000094529.2"; transcript_id "ENSMUST00000178403.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21744"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21744-201"; exon_number 2; exon_id "ENSMUSE00001063395.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049150.1"; havana_transcript "OTTMUST00000125436.1";
mm10-chrY	HAVANA	exon	32386287	32386321	.	+	.	gene_id "ENSMUSG00000094529.2"; transcript_id "ENSMUST00000178403.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21744"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21744-201"; exon_number 3; exon_id "ENSMUSE00001049379.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049150.1"; havana_transcript "OTTMUST00000125436.1";
mm10-chrY	HAVANA	exon	32393347	32393413	.	+	.	gene_id "ENSMUSG00000094529.2"; transcript_id "ENSMUST00000178403.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21744"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21744-201"; exon_number 4; exon_id "ENSMUSE00001083462.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049150.1"; havana_transcript "OTTMUST00000125436.1";
mm10-chrY	HAVANA	exon	32393979	32394013	.	+	.	gene_id "ENSMUSG00000094529.2"; transcript_id "ENSMUST00000178403.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21744"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21744-201"; exon_number 5; exon_id "ENSMUSE00001078400.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049150.1"; havana_transcript "OTTMUST00000125436.1";
mm10-chrY	HAVANA	exon	32401163	32401280	.	+	.	gene_id "ENSMUSG00000094529.2"; transcript_id "ENSMUST00000178403.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21744"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21744-201"; exon_number 6; exon_id "ENSMUSE00001032676.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049150.1"; havana_transcript "OTTMUST00000125436.1";
mm10-chrY	HAVANA	exon	32402027	32402126	.	+	.	gene_id "ENSMUSG00000094529.2"; transcript_id "ENSMUST00000178403.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21744"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21744-201"; exon_number 7; exon_id "ENSMUSE00000965108.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049150.1"; havana_transcript "OTTMUST00000125436.1";
mm10-chrY	HAVANA	exon	32404149	32404245	.	+	.	gene_id "ENSMUSG00000094529.2"; transcript_id "ENSMUST00000178403.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21744"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21744-201"; exon_number 8; exon_id "ENSMUSE00001320874.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049150.1"; havana_transcript "OTTMUST00000125436.1";
mm10-chrY	HAVANA	exon	32404605	32404629	.	+	.	gene_id "ENSMUSG00000094529.2"; transcript_id "ENSMUST00000178403.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21744"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21744-201"; exon_number 9; exon_id "ENSMUSE00001335052.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049150.1"; havana_transcript "OTTMUST00000125436.1";
mm10-chrY	HAVANA	gene	32494401	32497636	.	-	.	gene_id "ENSMUSG00000101745.6"; gene_type "lincRNA"; gene_name "Gm28764"; level 2; havana_gene "OTTMUSG00000049151.1";
mm10-chrY	HAVANA	transcript	32494401	32497636	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000191194.6"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125437.1";
mm10-chrY	HAVANA	exon	32496999	32497636	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000191194.6"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-203"; exon_number 1; exon_id "ENSMUSE00001327118.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125437.1";
mm10-chrY	HAVANA	exon	32496330	32496515	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000191194.6"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-203"; exon_number 2; exon_id "ENSMUSE00001321148.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125437.1";
mm10-chrY	HAVANA	exon	32495419	32495602	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000191194.6"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-203"; exon_number 3; exon_id "ENSMUSE00001321001.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125437.1";
mm10-chrY	HAVANA	exon	32494401	32494890	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000191194.6"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-203"; exon_number 4; exon_id "ENSMUSE00001332768.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125437.1";
mm10-chrY	HAVANA	transcript	32494822	32497184	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000187813.6"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125438.1";
mm10-chrY	HAVANA	exon	32496999	32497184	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000187813.6"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-201"; exon_number 1; exon_id "ENSMUSE00001323644.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125438.1";
mm10-chrY	HAVANA	exon	32496330	32496511	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000187813.6"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-201"; exon_number 2; exon_id "ENSMUSE00001332458.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125438.1";
mm10-chrY	HAVANA	exon	32494822	32494890	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000187813.6"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-201"; exon_number 3; exon_id "ENSMUSE00001323568.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125438.1";
mm10-chrY	HAVANA	transcript	32494822	32497184	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000188462.1"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125439.1";
mm10-chrY	HAVANA	exon	32496999	32497184	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000188462.1"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-202"; exon_number 1; exon_id "ENSMUSE00001323644.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125439.1";
mm10-chrY	HAVANA	exon	32496330	32496511	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000188462.1"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-202"; exon_number 2; exon_id "ENSMUSE00001332458.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125439.1";
mm10-chrY	HAVANA	exon	32495419	32495602	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000188462.1"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-202"; exon_number 3; exon_id "ENSMUSE00001321001.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125439.1";
mm10-chrY	HAVANA	exon	32494822	32494890	.	-	.	gene_id "ENSMUSG00000101745.6"; transcript_id "ENSMUST00000188462.1"; gene_type "lincRNA"; gene_name "Gm28764"; transcript_type "lincRNA"; transcript_name "Gm28764-202"; exon_number 4; exon_id "ENSMUSE00001323568.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049151.1"; havana_transcript "OTTMUST00000125439.1";
mm10-chrY	HAVANA	gene	32523345	32526576	.	-	.	gene_id "ENSMUSG00000100957.6"; gene_type "lincRNA"; gene_name "Gm28762"; level 2; havana_gene "OTTMUSG00000049152.1";
mm10-chrY	HAVANA	transcript	32523345	32526576	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000191259.6"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-203"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125440.1";
mm10-chrY	HAVANA	exon	32525938	32526576	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000191259.6"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-203"; exon_number 1; exon_id "ENSMUSE00001325098.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125440.1";
mm10-chrY	HAVANA	exon	32525271	32525453	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000191259.6"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-203"; exon_number 2; exon_id "ENSMUSE00001332044.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125440.1";
mm10-chrY	HAVANA	exon	32524362	32524542	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000191259.6"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-203"; exon_number 3; exon_id "ENSMUSE00001329527.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125440.1";
mm10-chrY	HAVANA	exon	32523345	32523834	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000191259.6"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-203"; exon_number 4; exon_id "ENSMUSE00001324703.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125440.1";
mm10-chrY	HAVANA	transcript	32523769	32526123	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000185669.6"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125441.1";
mm10-chrY	HAVANA	exon	32525938	32526123	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000185669.6"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-201"; exon_number 1; exon_id "ENSMUSE00001318562.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125441.1";
mm10-chrY	HAVANA	exon	32525271	32525449	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000185669.6"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-201"; exon_number 2; exon_id "ENSMUSE00001330221.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125441.1";
mm10-chrY	HAVANA	exon	32523769	32523834	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000185669.6"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-201"; exon_number 3; exon_id "ENSMUSE00001318898.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125441.1";
mm10-chrY	HAVANA	transcript	32523769	32526123	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000188315.1"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125442.1";
mm10-chrY	HAVANA	exon	32525938	32526123	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000188315.1"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-202"; exon_number 1; exon_id "ENSMUSE00001318562.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125442.1";
mm10-chrY	HAVANA	exon	32525271	32525449	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000188315.1"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-202"; exon_number 2; exon_id "ENSMUSE00001330221.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125442.1";
mm10-chrY	HAVANA	exon	32524362	32524542	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000188315.1"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-202"; exon_number 3; exon_id "ENSMUSE00001329527.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125442.1";
mm10-chrY	HAVANA	exon	32523769	32523834	.	-	.	gene_id "ENSMUSG00000100957.6"; transcript_id "ENSMUST00000188315.1"; gene_type "lincRNA"; gene_name "Gm28762"; transcript_type "lincRNA"; transcript_name "Gm28762-202"; exon_number 4; exon_id "ENSMUSE00001318898.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049152.1"; havana_transcript "OTTMUST00000125442.1";
mm10-chrY	HAVANA	gene	32557996	32558442	.	-	.	gene_id "ENSMUSG00000099756.1"; gene_type "lincRNA"; gene_name "Gm28763"; level 2; havana_gene "OTTMUSG00000049153.2";
mm10-chrY	HAVANA	transcript	32557996	32558442	.	-	.	gene_id "ENSMUSG00000099756.1"; transcript_id "ENSMUST00000188870.1"; gene_type "lincRNA"; gene_name "Gm28763"; transcript_type "lincRNA"; transcript_name "Gm28763-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049153.2"; havana_transcript "OTTMUST00000126045.1";
mm10-chrY	HAVANA	exon	32558338	32558442	.	-	.	gene_id "ENSMUSG00000099756.1"; transcript_id "ENSMUST00000188870.1"; gene_type "lincRNA"; gene_name "Gm28763"; transcript_type "lincRNA"; transcript_name "Gm28763-201"; exon_number 1; exon_id "ENSMUSE00001330470.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049153.2"; havana_transcript "OTTMUST00000126045.1";
mm10-chrY	HAVANA	exon	32557996	32558056	.	-	.	gene_id "ENSMUSG00000099756.1"; transcript_id "ENSMUST00000188870.1"; gene_type "lincRNA"; gene_name "Gm28763"; transcript_type "lincRNA"; transcript_name "Gm28763-201"; exon_number 2; exon_id "ENSMUSE00001320025.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049153.2"; havana_transcript "OTTMUST00000126045.1";
mm10-chrY	HAVANA	gene	32588415	32620443	.	-	.	gene_id "ENSMUSG00000095263.7"; gene_type "protein_coding"; gene_name "Gm21094"; level 2; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	HAVANA	transcript	32588415	32620443	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	exon	32620400	32620443	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 1; exon_id "ENSMUSE00001332924.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	exon	32618903	32619034	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 2; exon_id "ENSMUSE00001329143.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	CDS	32618903	32619020	.	-	0	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 2; exon_id "ENSMUSE00001329143.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	start_codon	32619018	32619020	.	-	0	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 2; exon_id "ENSMUSE00001329143.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	exon	32607509	32607575	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 3; exon_id "ENSMUSE00000983058.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	CDS	32607509	32607575	.	-	2	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 3; exon_id "ENSMUSE00000983058.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	exon	32606914	32606948	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 4; exon_id "ENSMUSE00001013301.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	CDS	32606914	32606948	.	-	1	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 4; exon_id "ENSMUSE00001013301.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	exon	32599820	32599886	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 5; exon_id "ENSMUSE00000992993.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	CDS	32599820	32599886	.	-	2	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 5; exon_id "ENSMUSE00000992993.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	exon	32599223	32599257	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 6; exon_id "ENSMUSE00001002340.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	CDS	32599223	32599257	.	-	1	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 6; exon_id "ENSMUSE00001002340.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	exon	32591967	32592084	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 7; exon_id "ENSMUSE00001046294.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	CDS	32591967	32592084	.	-	2	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 7; exon_id "ENSMUSE00001046294.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	exon	32591116	32591215	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 8; exon_id "ENSMUSE00001331270.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	CDS	32591116	32591215	.	-	1	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 8; exon_id "ENSMUSE00001331270.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	exon	32589002	32589100	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 9; exon_id "ENSMUSE00001319604.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	CDS	32589002	32589100	.	-	0	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 9; exon_id "ENSMUSE00001319604.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	exon	32588415	32588643	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 10; exon_id "ENSMUSE00001330264.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	CDS	32588617	32588643	.	-	0	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 10; exon_id "ENSMUSE00001330264.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	stop_codon	32588614	32588616	.	-	0	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 10; exon_id "ENSMUSE00001330264.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	UTR	32620400	32620443	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 1; exon_id "ENSMUSE00001332924.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	UTR	32619021	32619034	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 2; exon_id "ENSMUSE00001329143.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	HAVANA	UTR	32588415	32588616	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000189577.6"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-202"; exon_number 10; exon_id "ENSMUSE00001330264.1"; level 2; protein_id "ENSMUSP00000141113.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049445.1"; havana_transcript "OTTMUST00000126047.1";
mm10-chrY	ENSEMBL	transcript	32591149	32619011	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	exon	32618903	32619011	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 1; exon_id "ENSMUSE00001003289.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	CDS	32618903	32619011	.	-	0	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 1; exon_id "ENSMUSE00001003289.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	start_codon	32619009	32619011	.	-	0	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 1; exon_id "ENSMUSE00001003289.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	exon	32607509	32607575	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 2; exon_id "ENSMUSE00000983058.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	CDS	32607509	32607575	.	-	2	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 2; exon_id "ENSMUSE00000983058.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	exon	32606914	32606948	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 3; exon_id "ENSMUSE00001013301.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	CDS	32606914	32606948	.	-	1	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 3; exon_id "ENSMUSE00001013301.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	exon	32599820	32599886	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 4; exon_id "ENSMUSE00000992993.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	CDS	32599820	32599886	.	-	2	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 4; exon_id "ENSMUSE00000992993.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	exon	32599223	32599257	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 5; exon_id "ENSMUSE00001002340.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	CDS	32599223	32599257	.	-	1	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 5; exon_id "ENSMUSE00001002340.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	exon	32591967	32592084	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 6; exon_id "ENSMUSE00001046294.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	CDS	32591967	32592084	.	-	2	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 6; exon_id "ENSMUSE00001046294.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	exon	32591149	32591215	.	-	.	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 7; exon_id "ENSMUSE00000975028.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	ENSEMBL	CDS	32591149	32591215	.	-	1	gene_id "ENSMUSG00000095263.7"; transcript_id "ENSMUST00000177842.1"; gene_type "protein_coding"; gene_name "Gm21094"; transcript_type "protein_coding"; transcript_name "Gm21094-201"; exon_number 7; exon_id "ENSMUSE00000975028.1"; level 3; protein_id "ENSMUSP00000136851.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049445.1";
mm10-chrY	HAVANA	gene	32712665	32713192	.	-	.	gene_id "ENSMUSG00000096272.2"; gene_type "lincRNA"; gene_name "Gm21588"; level 2; havana_gene "OTTMUSG00000049155.1";
mm10-chrY	HAVANA	transcript	32712665	32713192	.	-	.	gene_id "ENSMUSG00000096272.2"; transcript_id "ENSMUST00000188721.1"; gene_type "lincRNA"; gene_name "Gm21588"; transcript_type "lincRNA"; transcript_name "Gm21588-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049155.1"; havana_transcript "OTTMUST00000125445.1";
mm10-chrY	HAVANA	exon	32713088	32713192	.	-	.	gene_id "ENSMUSG00000096272.2"; transcript_id "ENSMUST00000188721.1"; gene_type "lincRNA"; gene_name "Gm21588"; transcript_type "lincRNA"; transcript_name "Gm21588-202"; exon_number 1; exon_id "ENSMUSE00001324114.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049155.1"; havana_transcript "OTTMUST00000125445.1";
mm10-chrY	HAVANA	exon	32712665	32712733	.	-	.	gene_id "ENSMUSG00000096272.2"; transcript_id "ENSMUST00000188721.1"; gene_type "lincRNA"; gene_name "Gm21588"; transcript_type "lincRNA"; transcript_name "Gm21588-202"; exon_number 2; exon_id "ENSMUSE00001335833.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049155.1"; havana_transcript "OTTMUST00000125445.1";
mm10-chrY	ENSEMBL	transcript	32712689	32713186	.	-	.	gene_id "ENSMUSG00000096272.2"; transcript_id "ENSMUST00000180074.1"; gene_type "lincRNA"; gene_name "Gm21588"; transcript_type "lincRNA"; transcript_name "Gm21588-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049155.1";
mm10-chrY	ENSEMBL	exon	32712689	32713186	.	-	.	gene_id "ENSMUSG00000096272.2"; transcript_id "ENSMUST00000180074.1"; gene_type "lincRNA"; gene_name "Gm21588"; transcript_type "lincRNA"; transcript_name "Gm21588-201"; exon_number 1; exon_id "ENSMUSE00000972686.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049155.1";
mm10-chrY	HAVANA	gene	32754586	32756950	.	-	.	gene_id "ENSMUSG00000099426.6"; gene_type "lincRNA"; gene_name "Gm28761"; level 2; havana_gene "OTTMUSG00000049156.1";
mm10-chrY	HAVANA	transcript	32754586	32756950	.	-	.	gene_id "ENSMUSG00000099426.6"; transcript_id "ENSMUST00000186540.6"; gene_type "lincRNA"; gene_name "Gm28761"; transcript_type "lincRNA"; transcript_name "Gm28761-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049156.1"; havana_transcript "OTTMUST00000125446.1";
mm10-chrY	HAVANA	exon	32756765	32756950	.	-	.	gene_id "ENSMUSG00000099426.6"; transcript_id "ENSMUST00000186540.6"; gene_type "lincRNA"; gene_name "Gm28761"; transcript_type "lincRNA"; transcript_name "Gm28761-201"; exon_number 1; exon_id "ENSMUSE00001319353.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049156.1"; havana_transcript "OTTMUST00000125446.1";
mm10-chrY	HAVANA	exon	32756096	32756277	.	-	.	gene_id "ENSMUSG00000099426.6"; transcript_id "ENSMUST00000186540.6"; gene_type "lincRNA"; gene_name "Gm28761"; transcript_type "lincRNA"; transcript_name "Gm28761-201"; exon_number 2; exon_id "ENSMUSE00001322797.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049156.1"; havana_transcript "OTTMUST00000125446.1";
mm10-chrY	HAVANA	exon	32755183	32755367	.	-	.	gene_id "ENSMUSG00000099426.6"; transcript_id "ENSMUST00000186540.6"; gene_type "lincRNA"; gene_name "Gm28761"; transcript_type "lincRNA"; transcript_name "Gm28761-201"; exon_number 3; exon_id "ENSMUSE00001320933.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049156.1"; havana_transcript "OTTMUST00000125446.1";
mm10-chrY	HAVANA	exon	32754586	32754654	.	-	.	gene_id "ENSMUSG00000099426.6"; transcript_id "ENSMUST00000186540.6"; gene_type "lincRNA"; gene_name "Gm28761"; transcript_type "lincRNA"; transcript_name "Gm28761-201"; exon_number 4; exon_id "ENSMUSE00001320570.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049156.1"; havana_transcript "OTTMUST00000125446.1";
mm10-chrY	HAVANA	transcript	32754586	32756950	.	-	.	gene_id "ENSMUSG00000099426.6"; transcript_id "ENSMUST00000187767.1"; gene_type "lincRNA"; gene_name "Gm28761"; transcript_type "lincRNA"; transcript_name "Gm28761-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049156.1"; havana_transcript "OTTMUST00000125447.1";
mm10-chrY	HAVANA	exon	32756765	32756950	.	-	.	gene_id "ENSMUSG00000099426.6"; transcript_id "ENSMUST00000187767.1"; gene_type "lincRNA"; gene_name "Gm28761"; transcript_type "lincRNA"; transcript_name "Gm28761-202"; exon_number 1; exon_id "ENSMUSE00001319353.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049156.1"; havana_transcript "OTTMUST00000125447.1";
mm10-chrY	HAVANA	exon	32756096	32756277	.	-	.	gene_id "ENSMUSG00000099426.6"; transcript_id "ENSMUST00000187767.1"; gene_type "lincRNA"; gene_name "Gm28761"; transcript_type "lincRNA"; transcript_name "Gm28761-202"; exon_number 2; exon_id "ENSMUSE00001322797.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049156.1"; havana_transcript "OTTMUST00000125447.1";
mm10-chrY	HAVANA	exon	32754586	32754654	.	-	.	gene_id "ENSMUSG00000099426.6"; transcript_id "ENSMUST00000187767.1"; gene_type "lincRNA"; gene_name "Gm28761"; transcript_type "lincRNA"; transcript_name "Gm28761-202"; exon_number 3; exon_id "ENSMUSE00001320570.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049156.1"; havana_transcript "OTTMUST00000125447.1";
mm10-chrY	HAVANA	gene	32779240	32779767	.	-	.	gene_id "ENSMUSG00000096711.2"; gene_type "lincRNA"; gene_name "Gm21599"; level 2; havana_gene "OTTMUSG00000049157.1";
mm10-chrY	HAVANA	transcript	32779240	32779767	.	-	.	gene_id "ENSMUSG00000096711.2"; transcript_id "ENSMUST00000187381.1"; gene_type "lincRNA"; gene_name "Gm21599"; transcript_type "lincRNA"; transcript_name "Gm21599-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049157.1"; havana_transcript "OTTMUST00000125448.1";
mm10-chrY	HAVANA	exon	32779663	32779767	.	-	.	gene_id "ENSMUSG00000096711.2"; transcript_id "ENSMUST00000187381.1"; gene_type "lincRNA"; gene_name "Gm21599"; transcript_type "lincRNA"; transcript_name "Gm21599-202"; exon_number 1; exon_id "ENSMUSE00001335911.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049157.1"; havana_transcript "OTTMUST00000125448.1";
mm10-chrY	HAVANA	exon	32779240	32779308	.	-	.	gene_id "ENSMUSG00000096711.2"; transcript_id "ENSMUST00000187381.1"; gene_type "lincRNA"; gene_name "Gm21599"; transcript_type "lincRNA"; transcript_name "Gm21599-202"; exon_number 2; exon_id "ENSMUSE00001335986.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049157.1"; havana_transcript "OTTMUST00000125448.1";
mm10-chrY	ENSEMBL	transcript	32779264	32779761	.	-	.	gene_id "ENSMUSG00000096711.2"; transcript_id "ENSMUST00000178249.1"; gene_type "lincRNA"; gene_name "Gm21599"; transcript_type "lincRNA"; transcript_name "Gm21599-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049157.1";
mm10-chrY	ENSEMBL	exon	32779264	32779761	.	-	.	gene_id "ENSMUSG00000096711.2"; transcript_id "ENSMUST00000178249.1"; gene_type "lincRNA"; gene_name "Gm21599"; transcript_type "lincRNA"; transcript_name "Gm21599-201"; exon_number 1; exon_id "ENSMUSE00000964165.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049157.1";
mm10-chrY	HAVANA	gene	32817021	32819299	.	-	.	gene_id "ENSMUSG00000101728.6"; gene_type "lincRNA"; gene_name "Gm28765"; level 2; havana_gene "OTTMUSG00000049158.1";
mm10-chrY	HAVANA	transcript	32817021	32819299	.	-	.	gene_id "ENSMUSG00000101728.6"; transcript_id "ENSMUST00000189752.6"; gene_type "lincRNA"; gene_name "Gm28765"; transcript_type "lincRNA"; transcript_name "Gm28765-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049158.1"; havana_transcript "OTTMUST00000125449.1";
mm10-chrY	HAVANA	exon	32819199	32819299	.	-	.	gene_id "ENSMUSG00000101728.6"; transcript_id "ENSMUST00000189752.6"; gene_type "lincRNA"; gene_name "Gm28765"; transcript_type "lincRNA"; transcript_name "Gm28765-201"; exon_number 1; exon_id "ENSMUSE00001332226.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049158.1"; havana_transcript "OTTMUST00000125449.1";
mm10-chrY	HAVANA	exon	32818530	32818711	.	-	.	gene_id "ENSMUSG00000101728.6"; transcript_id "ENSMUST00000189752.6"; gene_type "lincRNA"; gene_name "Gm28765"; transcript_type "lincRNA"; transcript_name "Gm28765-201"; exon_number 2; exon_id "ENSMUSE00001335253.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049158.1"; havana_transcript "OTTMUST00000125449.1";
mm10-chrY	HAVANA	exon	32817617	32817801	.	-	.	gene_id "ENSMUSG00000101728.6"; transcript_id "ENSMUST00000189752.6"; gene_type "lincRNA"; gene_name "Gm28765"; transcript_type "lincRNA"; transcript_name "Gm28765-201"; exon_number 3; exon_id "ENSMUSE00001319559.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049158.1"; havana_transcript "OTTMUST00000125449.1";
mm10-chrY	HAVANA	exon	32817021	32817089	.	-	.	gene_id "ENSMUSG00000101728.6"; transcript_id "ENSMUST00000189752.6"; gene_type "lincRNA"; gene_name "Gm28765"; transcript_type "lincRNA"; transcript_name "Gm28765-201"; exon_number 4; exon_id "ENSMUSE00001320132.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049158.1"; havana_transcript "OTTMUST00000125449.1";
mm10-chrY	HAVANA	transcript	32817021	32819299	.	-	.	gene_id "ENSMUSG00000101728.6"; transcript_id "ENSMUST00000190380.1"; gene_type "lincRNA"; gene_name "Gm28765"; transcript_type "lincRNA"; transcript_name "Gm28765-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049158.1"; havana_transcript "OTTMUST00000125450.1";
mm10-chrY	HAVANA	exon	32819199	32819299	.	-	.	gene_id "ENSMUSG00000101728.6"; transcript_id "ENSMUST00000190380.1"; gene_type "lincRNA"; gene_name "Gm28765"; transcript_type "lincRNA"; transcript_name "Gm28765-202"; exon_number 1; exon_id "ENSMUSE00001332226.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049158.1"; havana_transcript "OTTMUST00000125450.1";
mm10-chrY	HAVANA	exon	32818530	32818711	.	-	.	gene_id "ENSMUSG00000101728.6"; transcript_id "ENSMUST00000190380.1"; gene_type "lincRNA"; gene_name "Gm28765"; transcript_type "lincRNA"; transcript_name "Gm28765-202"; exon_number 2; exon_id "ENSMUSE00001335253.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049158.1"; havana_transcript "OTTMUST00000125450.1";
mm10-chrY	HAVANA	exon	32817021	32817089	.	-	.	gene_id "ENSMUSG00000101728.6"; transcript_id "ENSMUST00000190380.1"; gene_type "lincRNA"; gene_name "Gm28765"; transcript_type "lincRNA"; transcript_name "Gm28765-202"; exon_number 3; exon_id "ENSMUSE00001320132.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049158.1"; havana_transcript "OTTMUST00000125450.1";
mm10-chrY	HAVANA	gene	33105205	33105900	.	-	.	gene_id "ENSMUSG00000100509.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21810"; level 2; havana_gene "OTTMUSG00000049159.1";
mm10-chrY	HAVANA	transcript	33105205	33105900	.	-	.	gene_id "ENSMUSG00000100509.1"; transcript_id "ENSMUST00000186188.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21810"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21810-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049159.1"; havana_transcript "OTTMUST00000125451.1";
mm10-chrY	HAVANA	exon	33105205	33105900	.	-	.	gene_id "ENSMUSG00000100509.1"; transcript_id "ENSMUST00000186188.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21810"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21810-201"; exon_number 1; exon_id "ENSMUSE00001330435.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049159.1"; havana_transcript "OTTMUST00000125451.1";
mm10-chrY	HAVANA	gene	33140698	33141225	.	+	.	gene_id "ENSMUSG00000095553.2"; gene_type "lincRNA"; gene_name "Gm21916"; level 2; havana_gene "OTTMUSG00000049170.1";
mm10-chrY	HAVANA	transcript	33140698	33141225	.	+	.	gene_id "ENSMUSG00000095553.2"; transcript_id "ENSMUST00000187044.1"; gene_type "lincRNA"; gene_name "Gm21916"; transcript_type "lincRNA"; transcript_name "Gm21916-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049170.1"; havana_transcript "OTTMUST00000125466.1";
mm10-chrY	HAVANA	exon	33140698	33140802	.	+	.	gene_id "ENSMUSG00000095553.2"; transcript_id "ENSMUST00000187044.1"; gene_type "lincRNA"; gene_name "Gm21916"; transcript_type "lincRNA"; transcript_name "Gm21916-202"; exon_number 1; exon_id "ENSMUSE00001321066.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049170.1"; havana_transcript "OTTMUST00000125466.1";
mm10-chrY	HAVANA	exon	33141157	33141225	.	+	.	gene_id "ENSMUSG00000095553.2"; transcript_id "ENSMUST00000187044.1"; gene_type "lincRNA"; gene_name "Gm21916"; transcript_type "lincRNA"; transcript_name "Gm21916-202"; exon_number 2; exon_id "ENSMUSE00001330078.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049170.1"; havana_transcript "OTTMUST00000125466.1";
mm10-chrY	ENSEMBL	transcript	33140704	33141201	.	+	.	gene_id "ENSMUSG00000095553.2"; transcript_id "ENSMUST00000178771.1"; gene_type "lincRNA"; gene_name "Gm21916"; transcript_type "lincRNA"; transcript_name "Gm21916-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049170.1";
mm10-chrY	ENSEMBL	exon	33140704	33141201	.	+	.	gene_id "ENSMUSG00000095553.2"; transcript_id "ENSMUST00000178771.1"; gene_type "lincRNA"; gene_name "Gm21916"; transcript_type "lincRNA"; transcript_name "Gm21916-201"; exon_number 1; exon_id "ENSMUSE00001060806.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049170.1";
mm10-chrY	HAVANA	gene	33163600	33165961	.	+	.	gene_id "ENSMUSG00000101099.6"; gene_type "lincRNA"; gene_name "Gm29191"; level 2; havana_gene "OTTMUSG00000049171.1";
mm10-chrY	HAVANA	transcript	33163600	33165961	.	+	.	gene_id "ENSMUSG00000101099.6"; transcript_id "ENSMUST00000185427.6"; gene_type "lincRNA"; gene_name "Gm29191"; transcript_type "lincRNA"; transcript_name "Gm29191-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049171.1"; havana_transcript "OTTMUST00000125467.1";
mm10-chrY	HAVANA	exon	33163600	33163785	.	+	.	gene_id "ENSMUSG00000101099.6"; transcript_id "ENSMUST00000185427.6"; gene_type "lincRNA"; gene_name "Gm29191"; transcript_type "lincRNA"; transcript_name "Gm29191-201"; exon_number 1; exon_id "ENSMUSE00001326245.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049171.1"; havana_transcript "OTTMUST00000125467.1";
mm10-chrY	HAVANA	exon	33164273	33164454	.	+	.	gene_id "ENSMUSG00000101099.6"; transcript_id "ENSMUST00000185427.6"; gene_type "lincRNA"; gene_name "Gm29191"; transcript_type "lincRNA"; transcript_name "Gm29191-201"; exon_number 2; exon_id "ENSMUSE00001324169.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049171.1"; havana_transcript "OTTMUST00000125467.1";
mm10-chrY	HAVANA	exon	33165181	33165364	.	+	.	gene_id "ENSMUSG00000101099.6"; transcript_id "ENSMUST00000185427.6"; gene_type "lincRNA"; gene_name "Gm29191"; transcript_type "lincRNA"; transcript_name "Gm29191-201"; exon_number 3; exon_id "ENSMUSE00001325904.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049171.1"; havana_transcript "OTTMUST00000125467.1";
mm10-chrY	HAVANA	exon	33165893	33165961	.	+	.	gene_id "ENSMUSG00000101099.6"; transcript_id "ENSMUST00000185427.6"; gene_type "lincRNA"; gene_name "Gm29191"; transcript_type "lincRNA"; transcript_name "Gm29191-201"; exon_number 4; exon_id "ENSMUSE00001336074.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049171.1"; havana_transcript "OTTMUST00000125467.1";
mm10-chrY	HAVANA	transcript	33163600	33165961	.	+	.	gene_id "ENSMUSG00000101099.6"; transcript_id "ENSMUST00000188742.1"; gene_type "lincRNA"; gene_name "Gm29191"; transcript_type "lincRNA"; transcript_name "Gm29191-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049171.1"; havana_transcript "OTTMUST00000125468.1";
mm10-chrY	HAVANA	exon	33163600	33163785	.	+	.	gene_id "ENSMUSG00000101099.6"; transcript_id "ENSMUST00000188742.1"; gene_type "lincRNA"; gene_name "Gm29191"; transcript_type "lincRNA"; transcript_name "Gm29191-202"; exon_number 1; exon_id "ENSMUSE00001326245.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049171.1"; havana_transcript "OTTMUST00000125468.1";
mm10-chrY	HAVANA	exon	33164273	33164454	.	+	.	gene_id "ENSMUSG00000101099.6"; transcript_id "ENSMUST00000188742.1"; gene_type "lincRNA"; gene_name "Gm29191"; transcript_type "lincRNA"; transcript_name "Gm29191-202"; exon_number 2; exon_id "ENSMUSE00001324169.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049171.1"; havana_transcript "OTTMUST00000125468.1";
mm10-chrY	HAVANA	exon	33165893	33165961	.	+	.	gene_id "ENSMUSG00000101099.6"; transcript_id "ENSMUST00000188742.1"; gene_type "lincRNA"; gene_name "Gm29191"; transcript_type "lincRNA"; transcript_name "Gm29191-202"; exon_number 3; exon_id "ENSMUSE00001336074.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049171.1"; havana_transcript "OTTMUST00000125468.1";
mm10-chrY	HAVANA	gene	33245018	33271073	.	+	.	gene_id "ENSMUSG00000095049.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; level 2; havana_gene "OTTMUSG00000049076.1";
mm10-chrY	HAVANA	transcript	33245018	33271073	.	+	.	gene_id "ENSMUSG00000095049.2"; transcript_id "ENSMUST00000178380.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21756-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049076.1"; havana_transcript "OTTMUST00000125332.1";
mm10-chrY	HAVANA	exon	33245018	33245061	.	+	.	gene_id "ENSMUSG00000095049.2"; transcript_id "ENSMUST00000178380.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21756-201"; exon_number 1; exon_id "ENSMUSE00001334093.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049076.1"; havana_transcript "OTTMUST00000125332.1";
mm10-chrY	HAVANA	exon	33246443	33246574	.	+	.	gene_id "ENSMUSG00000095049.2"; transcript_id "ENSMUST00000178380.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21756-201"; exon_number 2; exon_id "ENSMUSE00001062663.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049076.1"; havana_transcript "OTTMUST00000125332.1";
mm10-chrY	HAVANA	exon	33251884	33251950	.	+	.	gene_id "ENSMUSG00000095049.2"; transcript_id "ENSMUST00000178380.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21756-201"; exon_number 3; exon_id "ENSMUSE00001027971.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049076.1"; havana_transcript "OTTMUST00000125332.1";
mm10-chrY	HAVANA	exon	33252524	33252558	.	+	.	gene_id "ENSMUSG00000095049.2"; transcript_id "ENSMUST00000178380.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21756-201"; exon_number 4; exon_id "ENSMUSE00000975304.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049076.1"; havana_transcript "OTTMUST00000125332.1";
mm10-chrY	HAVANA	exon	33259583	33259649	.	+	.	gene_id "ENSMUSG00000095049.2"; transcript_id "ENSMUST00000178380.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21756-201"; exon_number 5; exon_id "ENSMUSE00000972679.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049076.1"; havana_transcript "OTTMUST00000125332.1";
mm10-chrY	HAVANA	exon	33260212	33260246	.	+	.	gene_id "ENSMUSG00000095049.2"; transcript_id "ENSMUST00000178380.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21756-201"; exon_number 6; exon_id "ENSMUSE00001040225.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049076.1"; havana_transcript "OTTMUST00000125332.1";
mm10-chrY	HAVANA	exon	33267385	33267502	.	+	.	gene_id "ENSMUSG00000095049.2"; transcript_id "ENSMUST00000178380.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21756-201"; exon_number 7; exon_id "ENSMUSE00001035194.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049076.1"; havana_transcript "OTTMUST00000125332.1";
mm10-chrY	HAVANA	exon	33268261	33268360	.	+	.	gene_id "ENSMUSG00000095049.2"; transcript_id "ENSMUST00000178380.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21756-201"; exon_number 8; exon_id "ENSMUSE00001086917.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049076.1"; havana_transcript "OTTMUST00000125332.1";
mm10-chrY	HAVANA	exon	33270383	33270479	.	+	.	gene_id "ENSMUSG00000095049.2"; transcript_id "ENSMUST00000178380.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21756-201"; exon_number 9; exon_id "ENSMUSE00001328153.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049076.1"; havana_transcript "OTTMUST00000125332.1";
mm10-chrY	HAVANA	exon	33270839	33271073	.	+	.	gene_id "ENSMUSG00000095049.2"; transcript_id "ENSMUST00000178380.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21756"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21756-201"; exon_number 10; exon_id "ENSMUSE00001323240.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049076.1"; havana_transcript "OTTMUST00000125332.1";
mm10-chrY	HAVANA	gene	33289865	33290311	.	+	.	gene_id "ENSMUSG00000101601.1"; gene_type "lincRNA"; gene_name "Gm28210"; level 2; havana_gene "OTTMUSG00000049077.1";
mm10-chrY	HAVANA	transcript	33289865	33290311	.	+	.	gene_id "ENSMUSG00000101601.1"; transcript_id "ENSMUST00000190631.1"; gene_type "lincRNA"; gene_name "Gm28210"; transcript_type "lincRNA"; transcript_name "Gm28210-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049077.1"; havana_transcript "OTTMUST00000125333.1";
mm10-chrY	HAVANA	exon	33289865	33289969	.	+	.	gene_id "ENSMUSG00000101601.1"; transcript_id "ENSMUST00000190631.1"; gene_type "lincRNA"; gene_name "Gm28210"; transcript_type "lincRNA"; transcript_name "Gm28210-201"; exon_number 1; exon_id "ENSMUSE00001320042.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049077.1"; havana_transcript "OTTMUST00000125333.1";
mm10-chrY	HAVANA	exon	33290251	33290311	.	+	.	gene_id "ENSMUSG00000101601.1"; transcript_id "ENSMUST00000190631.1"; gene_type "lincRNA"; gene_name "Gm28210"; transcript_type "lincRNA"; transcript_name "Gm28210-201"; exon_number 2; exon_id "ENSMUSE00001327334.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049077.1"; havana_transcript "OTTMUST00000125333.1";
mm10-chrY	HAVANA	gene	33321745	33324976	.	+	.	gene_id "ENSMUSG00000101516.6"; gene_type "lincRNA"; gene_name "Gm29074"; level 2; havana_gene "OTTMUSG00000049078.1";
mm10-chrY	HAVANA	transcript	33321745	33324976	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000188026.6"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-203"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125334.1";
mm10-chrY	HAVANA	exon	33321745	33322383	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000188026.6"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-203"; exon_number 1; exon_id "ENSMUSE00001320323.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125334.1";
mm10-chrY	HAVANA	exon	33322868	33323050	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000188026.6"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-203"; exon_number 2; exon_id "ENSMUSE00001334789.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125334.1";
mm10-chrY	HAVANA	exon	33323779	33323959	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000188026.6"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-203"; exon_number 3; exon_id "ENSMUSE00001325108.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125334.1";
mm10-chrY	HAVANA	exon	33324487	33324976	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000188026.6"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-203"; exon_number 4; exon_id "ENSMUSE00001328979.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125334.1";
mm10-chrY	HAVANA	transcript	33322198	33324552	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000185455.6"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125335.1";
mm10-chrY	HAVANA	exon	33322198	33322383	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000185455.6"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-201"; exon_number 1; exon_id "ENSMUSE00001320467.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125335.1";
mm10-chrY	HAVANA	exon	33322872	33323050	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000185455.6"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-201"; exon_number 2; exon_id "ENSMUSE00001334734.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125335.1";
mm10-chrY	HAVANA	exon	33324487	33324552	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000185455.6"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-201"; exon_number 3; exon_id "ENSMUSE00001326357.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125335.1";
mm10-chrY	HAVANA	transcript	33322198	33324552	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000187907.1"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125336.1";
mm10-chrY	HAVANA	exon	33322198	33322383	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000187907.1"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-202"; exon_number 1; exon_id "ENSMUSE00001320467.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125336.1";
mm10-chrY	HAVANA	exon	33322872	33323050	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000187907.1"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-202"; exon_number 2; exon_id "ENSMUSE00001334734.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125336.1";
mm10-chrY	HAVANA	exon	33323779	33323959	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000187907.1"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-202"; exon_number 3; exon_id "ENSMUSE00001325108.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125336.1";
mm10-chrY	HAVANA	exon	33324487	33324552	.	+	.	gene_id "ENSMUSG00000101516.6"; transcript_id "ENSMUST00000187907.1"; gene_type "lincRNA"; gene_name "Gm29074"; transcript_type "lincRNA"; transcript_name "Gm29074-202"; exon_number 4; exon_id "ENSMUSE00001326357.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049078.1"; havana_transcript "OTTMUST00000125336.1";
mm10-chrY	HAVANA	gene	33337241	33340707	.	+	.	gene_id "ENSMUSG00000101359.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28211"; level 2; havana_gene "OTTMUSG00000049079.1";
mm10-chrY	HAVANA	transcript	33337241	33340707	.	+	.	gene_id "ENSMUSG00000101359.1"; transcript_id "ENSMUST00000190920.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28211-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049079.1"; havana_transcript "OTTMUST00000125337.1";
mm10-chrY	HAVANA	exon	33337241	33337358	.	+	.	gene_id "ENSMUSG00000101359.1"; transcript_id "ENSMUST00000190920.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28211-201"; exon_number 1; exon_id "ENSMUSE00001325819.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049079.1"; havana_transcript "OTTMUST00000125337.1";
mm10-chrY	HAVANA	exon	33338108	33338207	.	+	.	gene_id "ENSMUSG00000101359.1"; transcript_id "ENSMUST00000190920.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28211-201"; exon_number 2; exon_id "ENSMUSE00001323793.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049079.1"; havana_transcript "OTTMUST00000125337.1";
mm10-chrY	HAVANA	exon	33340224	33340293	.	+	.	gene_id "ENSMUSG00000101359.1"; transcript_id "ENSMUST00000190920.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28211-201"; exon_number 3; exon_id "ENSMUSE00001320596.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049079.1"; havana_transcript "OTTMUST00000125337.1";
mm10-chrY	HAVANA	exon	33340681	33340707	.	+	.	gene_id "ENSMUSG00000101359.1"; transcript_id "ENSMUST00000190920.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28211-201"; exon_number 4; exon_id "ENSMUSE00001325517.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049079.1"; havana_transcript "OTTMUST00000125337.1";
mm10-chrY	HAVANA	gene	33382665	33385900	.	-	.	gene_id "ENSMUSG00000100790.6"; gene_type "lincRNA"; gene_name "Gm28518"; level 2; havana_gene "OTTMUSG00000049080.1";
mm10-chrY	HAVANA	transcript	33382665	33385900	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000188788.6"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125338.1";
mm10-chrY	HAVANA	exon	33385263	33385900	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000188788.6"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-203"; exon_number 1; exon_id "ENSMUSE00001334568.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125338.1";
mm10-chrY	HAVANA	exon	33384594	33384779	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000188788.6"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-203"; exon_number 2; exon_id "ENSMUSE00001330944.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125338.1";
mm10-chrY	HAVANA	exon	33383683	33383866	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000188788.6"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-203"; exon_number 3; exon_id "ENSMUSE00001330574.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125338.1";
mm10-chrY	HAVANA	exon	33382665	33383154	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000188788.6"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-203"; exon_number 4; exon_id "ENSMUSE00001319113.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125338.1";
mm10-chrY	HAVANA	transcript	33383086	33385448	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000187047.6"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125339.1";
mm10-chrY	HAVANA	exon	33385263	33385448	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000187047.6"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-201"; exon_number 1; exon_id "ENSMUSE00001334401.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125339.1";
mm10-chrY	HAVANA	exon	33384594	33384775	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000187047.6"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-201"; exon_number 2; exon_id "ENSMUSE00001324035.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125339.1";
mm10-chrY	HAVANA	exon	33383683	33383866	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000187047.6"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-201"; exon_number 3; exon_id "ENSMUSE00001330574.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125339.1";
mm10-chrY	HAVANA	exon	33383086	33383154	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000187047.6"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-201"; exon_number 4; exon_id "ENSMUSE00001327119.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125339.1";
mm10-chrY	HAVANA	transcript	33383086	33385448	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000187840.1"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125340.1";
mm10-chrY	HAVANA	exon	33385263	33385448	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000187840.1"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-202"; exon_number 1; exon_id "ENSMUSE00001334401.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125340.1";
mm10-chrY	HAVANA	exon	33384594	33384775	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000187840.1"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-202"; exon_number 2; exon_id "ENSMUSE00001324035.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125340.1";
mm10-chrY	HAVANA	exon	33383086	33383154	.	-	.	gene_id "ENSMUSG00000100790.6"; transcript_id "ENSMUST00000187840.1"; gene_type "lincRNA"; gene_name "Gm28518"; transcript_type "lincRNA"; transcript_name "Gm28518-202"; exon_number 3; exon_id "ENSMUSE00001327119.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049080.1"; havana_transcript "OTTMUST00000125340.1";
mm10-chrY	HAVANA	gene	33411603	33414835	.	-	.	gene_id "ENSMUSG00000101302.6"; gene_type "lincRNA"; gene_name "Gm28519"; level 2; havana_gene "OTTMUSG00000049081.1";
mm10-chrY	HAVANA	transcript	33411603	33414835	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000190126.6"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-203"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125341.1";
mm10-chrY	HAVANA	exon	33414197	33414835	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000190126.6"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-203"; exon_number 1; exon_id "ENSMUSE00001324907.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125341.1";
mm10-chrY	HAVANA	exon	33413530	33413712	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000190126.6"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-203"; exon_number 2; exon_id "ENSMUSE00001332252.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125341.1";
mm10-chrY	HAVANA	exon	33412620	33412800	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000190126.6"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-203"; exon_number 3; exon_id "ENSMUSE00001334065.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125341.1";
mm10-chrY	HAVANA	exon	33411603	33412092	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000190126.6"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-203"; exon_number 4; exon_id "ENSMUSE00001318882.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125341.1";
mm10-chrY	HAVANA	transcript	33412027	33414382	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000189729.6"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125342.1";
mm10-chrY	HAVANA	exon	33414197	33414382	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000189729.6"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-202"; exon_number 1; exon_id "ENSMUSE00001318896.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125342.1";
mm10-chrY	HAVANA	exon	33413530	33413708	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000189729.6"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-202"; exon_number 2; exon_id "ENSMUSE00001320815.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125342.1";
mm10-chrY	HAVANA	exon	33412620	33412800	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000189729.6"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-202"; exon_number 3; exon_id "ENSMUSE00001334065.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125342.1";
mm10-chrY	HAVANA	exon	33412027	33412092	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000189729.6"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-202"; exon_number 4; exon_id "ENSMUSE00001322090.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125342.1";
mm10-chrY	HAVANA	transcript	33412027	33414382	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000187457.1"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125343.1";
mm10-chrY	HAVANA	exon	33414197	33414382	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000187457.1"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-201"; exon_number 1; exon_id "ENSMUSE00001318896.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125343.1";
mm10-chrY	HAVANA	exon	33413530	33413708	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000187457.1"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-201"; exon_number 2; exon_id "ENSMUSE00001320815.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125343.1";
mm10-chrY	HAVANA	exon	33412027	33412092	.	-	.	gene_id "ENSMUSG00000101302.6"; transcript_id "ENSMUST00000187457.1"; gene_type "lincRNA"; gene_name "Gm28519"; transcript_type "lincRNA"; transcript_name "Gm28519-201"; exon_number 3; exon_id "ENSMUSE00001322090.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049081.1"; havana_transcript "OTTMUST00000125343.1";
mm10-chrY	HAVANA	gene	33446027	33449259	.	-	.	gene_id "ENSMUSG00000102125.6"; gene_type "lincRNA"; gene_name "Gm28520"; level 2; havana_gene "OTTMUSG00000049082.1";
mm10-chrY	HAVANA	transcript	33446027	33449259	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000189379.6"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125344.1";
mm10-chrY	HAVANA	exon	33448621	33449259	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000189379.6"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-202"; exon_number 1; exon_id "ENSMUSE00001319402.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125344.1";
mm10-chrY	HAVANA	exon	33447954	33448136	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000189379.6"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-202"; exon_number 2; exon_id "ENSMUSE00001327660.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125344.1";
mm10-chrY	HAVANA	exon	33447044	33447224	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000189379.6"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-202"; exon_number 3; exon_id "ENSMUSE00001333527.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125344.1";
mm10-chrY	HAVANA	exon	33446027	33446516	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000189379.6"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-202"; exon_number 4; exon_id "ENSMUSE00001321567.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125344.1";
mm10-chrY	HAVANA	transcript	33446451	33448806	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000190808.6"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125345.1";
mm10-chrY	HAVANA	exon	33448621	33448806	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000190808.6"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-203"; exon_number 1; exon_id "ENSMUSE00001325458.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125345.1";
mm10-chrY	HAVANA	exon	33447954	33448132	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000190808.6"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-203"; exon_number 2; exon_id "ENSMUSE00001318171.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125345.1";
mm10-chrY	HAVANA	exon	33447044	33447224	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000190808.6"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-203"; exon_number 3; exon_id "ENSMUSE00001333527.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125345.1";
mm10-chrY	HAVANA	exon	33446451	33446516	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000190808.6"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-203"; exon_number 4; exon_id "ENSMUSE00001333854.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125345.1";
mm10-chrY	HAVANA	transcript	33446451	33448806	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000187225.1"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125346.1";
mm10-chrY	HAVANA	exon	33448621	33448806	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000187225.1"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-201"; exon_number 1; exon_id "ENSMUSE00001325458.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125346.1";
mm10-chrY	HAVANA	exon	33447954	33448132	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000187225.1"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-201"; exon_number 2; exon_id "ENSMUSE00001318171.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125346.1";
mm10-chrY	HAVANA	exon	33446451	33446516	.	-	.	gene_id "ENSMUSG00000102125.6"; transcript_id "ENSMUST00000187225.1"; gene_type "lincRNA"; gene_name "Gm28520"; transcript_type "lincRNA"; transcript_name "Gm28520-201"; exon_number 3; exon_id "ENSMUSE00001333854.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049082.1"; havana_transcript "OTTMUST00000125346.1";
mm10-chrY	HAVANA	gene	33511116	33543164	.	-	.	gene_id "ENSMUSG00000095011.7"; gene_type "protein_coding"; gene_name "Gm20838"; level 2; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	HAVANA	transcript	33511116	33543164	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	exon	33543121	33543164	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 1; exon_id "ENSMUSE00001321938.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	exon	33541628	33541759	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 2; exon_id "ENSMUSE00001327203.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	CDS	33541628	33541745	.	-	0	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 2; exon_id "ENSMUSE00001327203.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	start_codon	33541743	33541745	.	-	0	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 2; exon_id "ENSMUSE00001327203.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	exon	33530216	33530282	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 3; exon_id "ENSMUSE00000964207.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	CDS	33530216	33530282	.	-	2	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 3; exon_id "ENSMUSE00000964207.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	exon	33529617	33529651	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 4; exon_id "ENSMUSE00001025771.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	CDS	33529617	33529651	.	-	1	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 4; exon_id "ENSMUSE00001025771.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	exon	33522525	33522591	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 5; exon_id "ENSMUSE00001056070.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	CDS	33522525	33522591	.	-	2	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 5; exon_id "ENSMUSE00001056070.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	exon	33521928	33521962	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 6; exon_id "ENSMUSE00001049349.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	CDS	33521928	33521962	.	-	1	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 6; exon_id "ENSMUSE00001049349.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	exon	33514670	33514787	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 7; exon_id "ENSMUSE00000977857.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	CDS	33514670	33514787	.	-	2	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 7; exon_id "ENSMUSE00000977857.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	exon	33513817	33513916	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 8; exon_id "ENSMUSE00001332394.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	CDS	33513817	33513916	.	-	1	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 8; exon_id "ENSMUSE00001332394.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	exon	33511708	33511806	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 9; exon_id "ENSMUSE00001332368.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	CDS	33511708	33511806	.	-	0	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 9; exon_id "ENSMUSE00001332368.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	exon	33511116	33511349	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 10; exon_id "ENSMUSE00001336096.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	CDS	33511323	33511349	.	-	0	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 10; exon_id "ENSMUSE00001336096.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	stop_codon	33511320	33511322	.	-	0	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 10; exon_id "ENSMUSE00001336096.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	UTR	33543121	33543164	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 1; exon_id "ENSMUSE00001321938.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	UTR	33541746	33541759	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 2; exon_id "ENSMUSE00001327203.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	HAVANA	UTR	33511116	33511322	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000187712.6"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-202"; exon_number 10; exon_id "ENSMUSE00001336096.1"; level 2; protein_id "ENSMUSP00000140626.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000049083.1"; havana_transcript "OTTMUST00000125347.1";
mm10-chrY	ENSEMBL	transcript	33513850	33541736	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	exon	33541628	33541736	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 1; exon_id "ENSMUSE00001061556.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	CDS	33541628	33541736	.	-	0	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 1; exon_id "ENSMUSE00001061556.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	start_codon	33541734	33541736	.	-	0	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 1; exon_id "ENSMUSE00001061556.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	exon	33530216	33530282	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 2; exon_id "ENSMUSE00000964207.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	CDS	33530216	33530282	.	-	2	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 2; exon_id "ENSMUSE00000964207.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	exon	33529617	33529651	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 3; exon_id "ENSMUSE00001025771.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	CDS	33529617	33529651	.	-	1	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 3; exon_id "ENSMUSE00001025771.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	exon	33522525	33522591	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 4; exon_id "ENSMUSE00001056070.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	CDS	33522525	33522591	.	-	2	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 4; exon_id "ENSMUSE00001056070.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	exon	33521928	33521962	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 5; exon_id "ENSMUSE00001049349.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	CDS	33521928	33521962	.	-	1	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 5; exon_id "ENSMUSE00001049349.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	exon	33514670	33514787	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 6; exon_id "ENSMUSE00000977857.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	CDS	33514670	33514787	.	-	2	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 6; exon_id "ENSMUSE00000977857.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	exon	33513850	33513916	.	-	.	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 7; exon_id "ENSMUSE00001007855.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	ENSEMBL	CDS	33513850	33513916	.	-	1	gene_id "ENSMUSG00000095011.7"; transcript_id "ENSMUST00000179884.1"; gene_type "protein_coding"; gene_name "Gm20838"; transcript_type "protein_coding"; transcript_name "Gm20838-201"; exon_number 7; exon_id "ENSMUSE00001007855.1"; level 3; protein_id "ENSMUSP00000136992.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049083.1";
mm10-chrY	HAVANA	gene	33635670	33636197	.	-	.	gene_id "ENSMUSG00000094064.2"; gene_type "lincRNA"; gene_name "Gm21626"; level 2; havana_gene "OTTMUSG00000049084.1";
mm10-chrY	HAVANA	transcript	33635670	33636197	.	-	.	gene_id "ENSMUSG00000094064.2"; transcript_id "ENSMUST00000189751.1"; gene_type "lincRNA"; gene_name "Gm21626"; transcript_type "lincRNA"; transcript_name "Gm21626-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049084.1"; havana_transcript "OTTMUST00000125348.1";
mm10-chrY	HAVANA	exon	33636093	33636197	.	-	.	gene_id "ENSMUSG00000094064.2"; transcript_id "ENSMUST00000189751.1"; gene_type "lincRNA"; gene_name "Gm21626"; transcript_type "lincRNA"; transcript_name "Gm21626-202"; exon_number 1; exon_id "ENSMUSE00001334736.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049084.1"; havana_transcript "OTTMUST00000125348.1";
mm10-chrY	HAVANA	exon	33635670	33635738	.	-	.	gene_id "ENSMUSG00000094064.2"; transcript_id "ENSMUST00000189751.1"; gene_type "lincRNA"; gene_name "Gm21626"; transcript_type "lincRNA"; transcript_name "Gm21626-202"; exon_number 2; exon_id "ENSMUSE00001333180.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049084.1"; havana_transcript "OTTMUST00000125348.1";
mm10-chrY	ENSEMBL	transcript	33635694	33636191	.	-	.	gene_id "ENSMUSG00000094064.2"; transcript_id "ENSMUST00000177791.1"; gene_type "lincRNA"; gene_name "Gm21626"; transcript_type "lincRNA"; transcript_name "Gm21626-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049084.1";
mm10-chrY	ENSEMBL	exon	33635694	33636191	.	-	.	gene_id "ENSMUSG00000094064.2"; transcript_id "ENSMUST00000177791.1"; gene_type "lincRNA"; gene_name "Gm21626"; transcript_type "lincRNA"; transcript_name "Gm21626-201"; exon_number 1; exon_id "ENSMUSE00000980619.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049084.1";
mm10-chrY	HAVANA	gene	33677627	33679991	.	-	.	gene_id "ENSMUSG00000099461.6"; gene_type "lincRNA"; gene_name "Gm28521"; level 2; havana_gene "OTTMUSG00000049085.1";
mm10-chrY	HAVANA	transcript	33677627	33679991	.	-	.	gene_id "ENSMUSG00000099461.6"; transcript_id "ENSMUST00000190230.6"; gene_type "lincRNA"; gene_name "Gm28521"; transcript_type "lincRNA"; transcript_name "Gm28521-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049085.1"; havana_transcript "OTTMUST00000125349.1";
mm10-chrY	HAVANA	exon	33679806	33679991	.	-	.	gene_id "ENSMUSG00000099461.6"; transcript_id "ENSMUST00000190230.6"; gene_type "lincRNA"; gene_name "Gm28521"; transcript_type "lincRNA"; transcript_name "Gm28521-202"; exon_number 1; exon_id "ENSMUSE00001330036.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049085.1"; havana_transcript "OTTMUST00000125349.1";
mm10-chrY	HAVANA	exon	33679137	33679318	.	-	.	gene_id "ENSMUSG00000099461.6"; transcript_id "ENSMUST00000190230.6"; gene_type "lincRNA"; gene_name "Gm28521"; transcript_type "lincRNA"; transcript_name "Gm28521-202"; exon_number 2; exon_id "ENSMUSE00001327810.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049085.1"; havana_transcript "OTTMUST00000125349.1";
mm10-chrY	HAVANA	exon	33677627	33677695	.	-	.	gene_id "ENSMUSG00000099461.6"; transcript_id "ENSMUST00000190230.6"; gene_type "lincRNA"; gene_name "Gm28521"; transcript_type "lincRNA"; transcript_name "Gm28521-202"; exon_number 3; exon_id "ENSMUSE00001319242.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049085.1"; havana_transcript "OTTMUST00000125349.1";
mm10-chrY	HAVANA	transcript	33677627	33679991	.	-	.	gene_id "ENSMUSG00000099461.6"; transcript_id "ENSMUST00000188948.1"; gene_type "lincRNA"; gene_name "Gm28521"; transcript_type "lincRNA"; transcript_name "Gm28521-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049085.1"; havana_transcript "OTTMUST00000125350.1";
mm10-chrY	HAVANA	exon	33679806	33679991	.	-	.	gene_id "ENSMUSG00000099461.6"; transcript_id "ENSMUST00000188948.1"; gene_type "lincRNA"; gene_name "Gm28521"; transcript_type "lincRNA"; transcript_name "Gm28521-201"; exon_number 1; exon_id "ENSMUSE00001330036.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049085.1"; havana_transcript "OTTMUST00000125350.1";
mm10-chrY	HAVANA	exon	33679137	33679318	.	-	.	gene_id "ENSMUSG00000099461.6"; transcript_id "ENSMUST00000188948.1"; gene_type "lincRNA"; gene_name "Gm28521"; transcript_type "lincRNA"; transcript_name "Gm28521-201"; exon_number 2; exon_id "ENSMUSE00001327810.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049085.1"; havana_transcript "OTTMUST00000125350.1";
mm10-chrY	HAVANA	exon	33678224	33678408	.	-	.	gene_id "ENSMUSG00000099461.6"; transcript_id "ENSMUST00000188948.1"; gene_type "lincRNA"; gene_name "Gm28521"; transcript_type "lincRNA"; transcript_name "Gm28521-201"; exon_number 3; exon_id "ENSMUSE00001335931.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049085.1"; havana_transcript "OTTMUST00000125350.1";
mm10-chrY	HAVANA	exon	33677627	33677695	.	-	.	gene_id "ENSMUSG00000099461.6"; transcript_id "ENSMUST00000188948.1"; gene_type "lincRNA"; gene_name "Gm28521"; transcript_type "lincRNA"; transcript_name "Gm28521-201"; exon_number 4; exon_id "ENSMUSE00001319242.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049085.1"; havana_transcript "OTTMUST00000125350.1";
mm10-chrY	HAVANA	gene	33702336	33702863	.	-	.	gene_id "ENSMUSG00000096532.2"; gene_type "lincRNA"; gene_name "Gm21633"; level 2; havana_gene "OTTMUSG00000049086.1";
mm10-chrY	HAVANA	transcript	33702336	33702863	.	-	.	gene_id "ENSMUSG00000096532.2"; transcript_id "ENSMUST00000186630.1"; gene_type "lincRNA"; gene_name "Gm21633"; transcript_type "lincRNA"; transcript_name "Gm21633-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049086.1"; havana_transcript "OTTMUST00000125351.1";
mm10-chrY	HAVANA	exon	33702759	33702863	.	-	.	gene_id "ENSMUSG00000096532.2"; transcript_id "ENSMUST00000186630.1"; gene_type "lincRNA"; gene_name "Gm21633"; transcript_type "lincRNA"; transcript_name "Gm21633-202"; exon_number 1; exon_id "ENSMUSE00001323200.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049086.1"; havana_transcript "OTTMUST00000125351.1";
mm10-chrY	HAVANA	exon	33702336	33702404	.	-	.	gene_id "ENSMUSG00000096532.2"; transcript_id "ENSMUST00000186630.1"; gene_type "lincRNA"; gene_name "Gm21633"; transcript_type "lincRNA"; transcript_name "Gm21633-202"; exon_number 2; exon_id "ENSMUSE00001324569.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049086.1"; havana_transcript "OTTMUST00000125351.1";
mm10-chrY	ENSEMBL	transcript	33702360	33702857	.	-	.	gene_id "ENSMUSG00000096532.2"; transcript_id "ENSMUST00000178941.1"; gene_type "lincRNA"; gene_name "Gm21633"; transcript_type "lincRNA"; transcript_name "Gm21633-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049086.1";
mm10-chrY	ENSEMBL	exon	33702360	33702857	.	-	.	gene_id "ENSMUSG00000096532.2"; transcript_id "ENSMUST00000178941.1"; gene_type "lincRNA"; gene_name "Gm21633"; transcript_type "lincRNA"; transcript_name "Gm21633-201"; exon_number 1; exon_id "ENSMUSE00000983100.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000049086.1";
mm10-chrY	HAVANA	gene	33740211	33742489	.	-	.	gene_id "ENSMUSG00000101681.6"; gene_type "lincRNA"; gene_name "Gm28522"; level 2; havana_gene "OTTMUSG00000049087.1";
mm10-chrY	HAVANA	transcript	33740211	33742489	.	-	.	gene_id "ENSMUSG00000101681.6"; transcript_id "ENSMUST00000190561.6"; gene_type "lincRNA"; gene_name "Gm28522"; transcript_type "lincRNA"; transcript_name "Gm28522-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049087.1"; havana_transcript "OTTMUST00000125352.1";
mm10-chrY	HAVANA	exon	33742389	33742489	.	-	.	gene_id "ENSMUSG00000101681.6"; transcript_id "ENSMUST00000190561.6"; gene_type "lincRNA"; gene_name "Gm28522"; transcript_type "lincRNA"; transcript_name "Gm28522-202"; exon_number 1; exon_id "ENSMUSE00001330543.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049087.1"; havana_transcript "OTTMUST00000125352.1";
mm10-chrY	HAVANA	exon	33741720	33741901	.	-	.	gene_id "ENSMUSG00000101681.6"; transcript_id "ENSMUST00000190561.6"; gene_type "lincRNA"; gene_name "Gm28522"; transcript_type "lincRNA"; transcript_name "Gm28522-202"; exon_number 2; exon_id "ENSMUSE00001318937.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049087.1"; havana_transcript "OTTMUST00000125352.1";
mm10-chrY	HAVANA	exon	33740807	33740991	.	-	.	gene_id "ENSMUSG00000101681.6"; transcript_id "ENSMUST00000190561.6"; gene_type "lincRNA"; gene_name "Gm28522"; transcript_type "lincRNA"; transcript_name "Gm28522-202"; exon_number 3; exon_id "ENSMUSE00001322366.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049087.1"; havana_transcript "OTTMUST00000125352.1";
mm10-chrY	HAVANA	exon	33740211	33740279	.	-	.	gene_id "ENSMUSG00000101681.6"; transcript_id "ENSMUST00000190561.6"; gene_type "lincRNA"; gene_name "Gm28522"; transcript_type "lincRNA"; transcript_name "Gm28522-202"; exon_number 4; exon_id "ENSMUSE00001334414.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049087.1"; havana_transcript "OTTMUST00000125352.1";
mm10-chrY	HAVANA	transcript	33740211	33742489	.	-	.	gene_id "ENSMUSG00000101681.6"; transcript_id "ENSMUST00000185908.1"; gene_type "lincRNA"; gene_name "Gm28522"; transcript_type "lincRNA"; transcript_name "Gm28522-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049087.1"; havana_transcript "OTTMUST00000125353.1";
mm10-chrY	HAVANA	exon	33742389	33742489	.	-	.	gene_id "ENSMUSG00000101681.6"; transcript_id "ENSMUST00000185908.1"; gene_type "lincRNA"; gene_name "Gm28522"; transcript_type "lincRNA"; transcript_name "Gm28522-201"; exon_number 1; exon_id "ENSMUSE00001330543.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049087.1"; havana_transcript "OTTMUST00000125353.1";
mm10-chrY	HAVANA	exon	33741720	33741901	.	-	.	gene_id "ENSMUSG00000101681.6"; transcript_id "ENSMUST00000185908.1"; gene_type "lincRNA"; gene_name "Gm28522"; transcript_type "lincRNA"; transcript_name "Gm28522-201"; exon_number 2; exon_id "ENSMUSE00001318937.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049087.1"; havana_transcript "OTTMUST00000125353.1";
mm10-chrY	HAVANA	exon	33740211	33740279	.	-	.	gene_id "ENSMUSG00000101681.6"; transcript_id "ENSMUST00000185908.1"; gene_type "lincRNA"; gene_name "Gm28522"; transcript_type "lincRNA"; transcript_name "Gm28522-201"; exon_number 3; exon_id "ENSMUSE00001334414.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049087.1"; havana_transcript "OTTMUST00000125353.1";
mm10-chrY	HAVANA	gene	34028189	34028884	.	-	.	gene_id "ENSMUSG00000101870.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21745"; level 2; havana_gene "OTTMUSG00000049088.1";
mm10-chrY	HAVANA	transcript	34028189	34028884	.	-	.	gene_id "ENSMUSG00000101870.1"; transcript_id "ENSMUST00000189513.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21745"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21745-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049088.1"; havana_transcript "OTTMUST00000125354.1";
mm10-chrY	HAVANA	exon	34028189	34028884	.	-	.	gene_id "ENSMUSG00000101870.1"; transcript_id "ENSMUST00000189513.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21745"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21745-201"; exon_number 1; exon_id "ENSMUSE00001322604.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049088.1"; havana_transcript "OTTMUST00000125354.1";
mm10-chrY	HAVANA	gene	34063698	34064225	.	+	.	gene_id "ENSMUSG00000101472.1"; gene_type "lincRNA"; gene_name "Gm28517"; level 2; havana_gene "OTTMUSG00000049089.1";
mm10-chrY	HAVANA	transcript	34063698	34064225	.	+	.	gene_id "ENSMUSG00000101472.1"; transcript_id "ENSMUST00000190343.1"; gene_type "lincRNA"; gene_name "Gm28517"; transcript_type "lincRNA"; transcript_name "Gm28517-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049089.1"; havana_transcript "OTTMUST00000125355.1";
mm10-chrY	HAVANA	exon	34063698	34063802	.	+	.	gene_id "ENSMUSG00000101472.1"; transcript_id "ENSMUST00000190343.1"; gene_type "lincRNA"; gene_name "Gm28517"; transcript_type "lincRNA"; transcript_name "Gm28517-201"; exon_number 1; exon_id "ENSMUSE00001318565.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049089.1"; havana_transcript "OTTMUST00000125355.1";
mm10-chrY	HAVANA	exon	34064157	34064225	.	+	.	gene_id "ENSMUSG00000101472.1"; transcript_id "ENSMUST00000190343.1"; gene_type "lincRNA"; gene_name "Gm28517"; transcript_type "lincRNA"; transcript_name "Gm28517-201"; exon_number 2; exon_id "ENSMUSE00001331317.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049089.1"; havana_transcript "OTTMUST00000125355.1";
mm10-chrY	HAVANA	gene	34086381	34088745	.	+	.	gene_id "ENSMUSG00000101407.6"; gene_type "lincRNA"; gene_name "Gm29532"; level 2; havana_gene "OTTMUSG00000049090.1";
mm10-chrY	HAVANA	transcript	34086381	34088745	.	+	.	gene_id "ENSMUSG00000101407.6"; transcript_id "ENSMUST00000185593.6"; gene_type "lincRNA"; gene_name "Gm29532"; transcript_type "lincRNA"; transcript_name "Gm29532-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049090.1"; havana_transcript "OTTMUST00000125356.1";
mm10-chrY	HAVANA	exon	34086381	34086566	.	+	.	gene_id "ENSMUSG00000101407.6"; transcript_id "ENSMUST00000185593.6"; gene_type "lincRNA"; gene_name "Gm29532"; transcript_type "lincRNA"; transcript_name "Gm29532-201"; exon_number 1; exon_id "ENSMUSE00001332240.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049090.1"; havana_transcript "OTTMUST00000125356.1";
mm10-chrY	HAVANA	exon	34087054	34087235	.	+	.	gene_id "ENSMUSG00000101407.6"; transcript_id "ENSMUST00000185593.6"; gene_type "lincRNA"; gene_name "Gm29532"; transcript_type "lincRNA"; transcript_name "Gm29532-201"; exon_number 2; exon_id "ENSMUSE00001334707.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049090.1"; havana_transcript "OTTMUST00000125356.1";
mm10-chrY	HAVANA	exon	34087964	34088148	.	+	.	gene_id "ENSMUSG00000101407.6"; transcript_id "ENSMUST00000185593.6"; gene_type "lincRNA"; gene_name "Gm29532"; transcript_type "lincRNA"; transcript_name "Gm29532-201"; exon_number 3; exon_id "ENSMUSE00001319674.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049090.1"; havana_transcript "OTTMUST00000125356.1";
mm10-chrY	HAVANA	exon	34088677	34088745	.	+	.	gene_id "ENSMUSG00000101407.6"; transcript_id "ENSMUST00000185593.6"; gene_type "lincRNA"; gene_name "Gm29532"; transcript_type "lincRNA"; transcript_name "Gm29532-201"; exon_number 4; exon_id "ENSMUSE00001320822.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049090.1"; havana_transcript "OTTMUST00000125356.1";
mm10-chrY	HAVANA	transcript	34086381	34088745	.	+	.	gene_id "ENSMUSG00000101407.6"; transcript_id "ENSMUST00000191113.1"; gene_type "lincRNA"; gene_name "Gm29532"; transcript_type "lincRNA"; transcript_name "Gm29532-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049090.1"; havana_transcript "OTTMUST00000125357.1";
mm10-chrY	HAVANA	exon	34086381	34086566	.	+	.	gene_id "ENSMUSG00000101407.6"; transcript_id "ENSMUST00000191113.1"; gene_type "lincRNA"; gene_name "Gm29532"; transcript_type "lincRNA"; transcript_name "Gm29532-202"; exon_number 1; exon_id "ENSMUSE00001332240.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049090.1"; havana_transcript "OTTMUST00000125357.1";
mm10-chrY	HAVANA	exon	34087054	34087235	.	+	.	gene_id "ENSMUSG00000101407.6"; transcript_id "ENSMUST00000191113.1"; gene_type "lincRNA"; gene_name "Gm29532"; transcript_type "lincRNA"; transcript_name "Gm29532-202"; exon_number 2; exon_id "ENSMUSE00001334707.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049090.1"; havana_transcript "OTTMUST00000125357.1";
mm10-chrY	HAVANA	exon	34088677	34088745	.	+	.	gene_id "ENSMUSG00000101407.6"; transcript_id "ENSMUST00000191113.1"; gene_type "lincRNA"; gene_name "Gm29532"; transcript_type "lincRNA"; transcript_name "Gm29532-202"; exon_number 3; exon_id "ENSMUSE00001320822.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049090.1"; havana_transcript "OTTMUST00000125357.1";
mm10-chrY	HAVANA	gene	34125909	34126436	.	+	.	gene_id "ENSMUSG00000099500.1"; gene_type "lincRNA"; gene_name "Gm29531"; level 2; havana_gene "OTTMUSG00000049091.1";
mm10-chrY	HAVANA	transcript	34125909	34126436	.	+	.	gene_id "ENSMUSG00000099500.1"; transcript_id "ENSMUST00000190569.1"; gene_type "lincRNA"; gene_name "Gm29531"; transcript_type "lincRNA"; transcript_name "Gm29531-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049091.1"; havana_transcript "OTTMUST00000125358.1";
mm10-chrY	HAVANA	exon	34125909	34126013	.	+	.	gene_id "ENSMUSG00000099500.1"; transcript_id "ENSMUST00000190569.1"; gene_type "lincRNA"; gene_name "Gm29531"; transcript_type "lincRNA"; transcript_name "Gm29531-201"; exon_number 1; exon_id "ENSMUSE00001331537.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049091.1"; havana_transcript "OTTMUST00000125358.1";
mm10-chrY	HAVANA	exon	34126368	34126436	.	+	.	gene_id "ENSMUSG00000099500.1"; transcript_id "ENSMUST00000190569.1"; gene_type "lincRNA"; gene_name "Gm29531"; transcript_type "lincRNA"; transcript_name "Gm29531-201"; exon_number 2; exon_id "ENSMUSE00001326020.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049091.1"; havana_transcript "OTTMUST00000125358.1";
mm10-chrY	HAVANA	gene	34148855	34151218	.	+	.	gene_id "ENSMUSG00000100097.6"; gene_type "lincRNA"; gene_name "Gm28464"; level 2; havana_gene "OTTMUSG00000049002.1";
mm10-chrY	HAVANA	transcript	34148855	34151218	.	+	.	gene_id "ENSMUSG00000100097.6"; transcript_id "ENSMUST00000188929.6"; gene_type "lincRNA"; gene_name "Gm28464"; transcript_type "lincRNA"; transcript_name "Gm28464-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049002.1"; havana_transcript "OTTMUST00000125171.1";
mm10-chrY	HAVANA	exon	34148855	34149040	.	+	.	gene_id "ENSMUSG00000100097.6"; transcript_id "ENSMUST00000188929.6"; gene_type "lincRNA"; gene_name "Gm28464"; transcript_type "lincRNA"; transcript_name "Gm28464-202"; exon_number 1; exon_id "ENSMUSE00001331913.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049002.1"; havana_transcript "OTTMUST00000125171.1";
mm10-chrY	HAVANA	exon	34149528	34149709	.	+	.	gene_id "ENSMUSG00000100097.6"; transcript_id "ENSMUST00000188929.6"; gene_type "lincRNA"; gene_name "Gm28464"; transcript_type "lincRNA"; transcript_name "Gm28464-202"; exon_number 2; exon_id "ENSMUSE00001332676.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049002.1"; havana_transcript "OTTMUST00000125171.1";
mm10-chrY	HAVANA	exon	34151150	34151218	.	+	.	gene_id "ENSMUSG00000100097.6"; transcript_id "ENSMUST00000188929.6"; gene_type "lincRNA"; gene_name "Gm28464"; transcript_type "lincRNA"; transcript_name "Gm28464-202"; exon_number 3; exon_id "ENSMUSE00001319940.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049002.1"; havana_transcript "OTTMUST00000125171.1";
mm10-chrY	HAVANA	transcript	34148855	34151218	.	+	.	gene_id "ENSMUSG00000100097.6"; transcript_id "ENSMUST00000187726.1"; gene_type "lincRNA"; gene_name "Gm28464"; transcript_type "lincRNA"; transcript_name "Gm28464-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049002.1"; havana_transcript "OTTMUST00000125172.1";
mm10-chrY	HAVANA	exon	34148855	34149040	.	+	.	gene_id "ENSMUSG00000100097.6"; transcript_id "ENSMUST00000187726.1"; gene_type "lincRNA"; gene_name "Gm28464"; transcript_type "lincRNA"; transcript_name "Gm28464-201"; exon_number 1; exon_id "ENSMUSE00001331913.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049002.1"; havana_transcript "OTTMUST00000125172.1";
mm10-chrY	HAVANA	exon	34149528	34149709	.	+	.	gene_id "ENSMUSG00000100097.6"; transcript_id "ENSMUST00000187726.1"; gene_type "lincRNA"; gene_name "Gm28464"; transcript_type "lincRNA"; transcript_name "Gm28464-201"; exon_number 2; exon_id "ENSMUSE00001332676.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049002.1"; havana_transcript "OTTMUST00000125172.1";
mm10-chrY	HAVANA	exon	34150437	34150621	.	+	.	gene_id "ENSMUSG00000100097.6"; transcript_id "ENSMUST00000187726.1"; gene_type "lincRNA"; gene_name "Gm28464"; transcript_type "lincRNA"; transcript_name "Gm28464-201"; exon_number 3; exon_id "ENSMUSE00001321258.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049002.1"; havana_transcript "OTTMUST00000125172.1";
mm10-chrY	HAVANA	exon	34151150	34151218	.	+	.	gene_id "ENSMUSG00000100097.6"; transcript_id "ENSMUST00000187726.1"; gene_type "lincRNA"; gene_name "Gm28464"; transcript_type "lincRNA"; transcript_name "Gm28464-201"; exon_number 4; exon_id "ENSMUSE00001319940.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049002.1"; havana_transcript "OTTMUST00000125172.1";
mm10-chrY	HAVANA	gene	34186435	34186962	.	+	.	gene_id "ENSMUSG00000101474.1"; gene_type "lincRNA"; gene_name "Gm29656"; level 2; havana_gene "OTTMUSG00000049023.1";
mm10-chrY	HAVANA	transcript	34186435	34186962	.	+	.	gene_id "ENSMUSG00000101474.1"; transcript_id "ENSMUST00000187236.1"; gene_type "lincRNA"; gene_name "Gm29656"; transcript_type "lincRNA"; transcript_name "Gm29656-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049023.1"; havana_transcript "OTTMUST00000125234.1";
mm10-chrY	HAVANA	exon	34186435	34186539	.	+	.	gene_id "ENSMUSG00000101474.1"; transcript_id "ENSMUST00000187236.1"; gene_type "lincRNA"; gene_name "Gm29656"; transcript_type "lincRNA"; transcript_name "Gm29656-201"; exon_number 1; exon_id "ENSMUSE00001324421.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049023.1"; havana_transcript "OTTMUST00000125234.1";
mm10-chrY	HAVANA	exon	34186894	34186962	.	+	.	gene_id "ENSMUSG00000101474.1"; transcript_id "ENSMUST00000187236.1"; gene_type "lincRNA"; gene_name "Gm29656"; transcript_type "lincRNA"; transcript_name "Gm29656-201"; exon_number 2; exon_id "ENSMUSE00001330275.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049023.1"; havana_transcript "OTTMUST00000125234.1";
mm10-chrY	HAVANA	gene	34209370	34211733	.	+	.	gene_id "ENSMUSG00000099737.6"; gene_type "lincRNA"; gene_name "Gm29655"; level 2; havana_gene "OTTMUSG00000049024.1";
mm10-chrY	HAVANA	transcript	34209370	34211733	.	+	.	gene_id "ENSMUSG00000099737.6"; transcript_id "ENSMUST00000187728.6"; gene_type "lincRNA"; gene_name "Gm29655"; transcript_type "lincRNA"; transcript_name "Gm29655-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049024.1"; havana_transcript "OTTMUST00000125235.1";
mm10-chrY	HAVANA	exon	34209370	34209555	.	+	.	gene_id "ENSMUSG00000099737.6"; transcript_id "ENSMUST00000187728.6"; gene_type "lincRNA"; gene_name "Gm29655"; transcript_type "lincRNA"; transcript_name "Gm29655-201"; exon_number 1; exon_id "ENSMUSE00001334663.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049024.1"; havana_transcript "OTTMUST00000125235.1";
mm10-chrY	HAVANA	exon	34210043	34210224	.	+	.	gene_id "ENSMUSG00000099737.6"; transcript_id "ENSMUST00000187728.6"; gene_type "lincRNA"; gene_name "Gm29655"; transcript_type "lincRNA"; transcript_name "Gm29655-201"; exon_number 2; exon_id "ENSMUSE00001330987.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049024.1"; havana_transcript "OTTMUST00000125235.1";
mm10-chrY	HAVANA	exon	34210952	34211136	.	+	.	gene_id "ENSMUSG00000099737.6"; transcript_id "ENSMUST00000187728.6"; gene_type "lincRNA"; gene_name "Gm29655"; transcript_type "lincRNA"; transcript_name "Gm29655-201"; exon_number 3; exon_id "ENSMUSE00001326607.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049024.1"; havana_transcript "OTTMUST00000125235.1";
mm10-chrY	HAVANA	exon	34211665	34211733	.	+	.	gene_id "ENSMUSG00000099737.6"; transcript_id "ENSMUST00000187728.6"; gene_type "lincRNA"; gene_name "Gm29655"; transcript_type "lincRNA"; transcript_name "Gm29655-201"; exon_number 4; exon_id "ENSMUSE00001321352.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049024.1"; havana_transcript "OTTMUST00000125235.1";
mm10-chrY	HAVANA	transcript	34209370	34211733	.	+	.	gene_id "ENSMUSG00000099737.6"; transcript_id "ENSMUST00000190528.1"; gene_type "lincRNA"; gene_name "Gm29655"; transcript_type "lincRNA"; transcript_name "Gm29655-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049024.1"; havana_transcript "OTTMUST00000125236.1";
mm10-chrY	HAVANA	exon	34209370	34209555	.	+	.	gene_id "ENSMUSG00000099737.6"; transcript_id "ENSMUST00000190528.1"; gene_type "lincRNA"; gene_name "Gm29655"; transcript_type "lincRNA"; transcript_name "Gm29655-202"; exon_number 1; exon_id "ENSMUSE00001334663.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049024.1"; havana_transcript "OTTMUST00000125236.1";
mm10-chrY	HAVANA	exon	34210043	34210224	.	+	.	gene_id "ENSMUSG00000099737.6"; transcript_id "ENSMUST00000190528.1"; gene_type "lincRNA"; gene_name "Gm29655"; transcript_type "lincRNA"; transcript_name "Gm29655-202"; exon_number 2; exon_id "ENSMUSE00001330987.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049024.1"; havana_transcript "OTTMUST00000125236.1";
mm10-chrY	HAVANA	exon	34211665	34211733	.	+	.	gene_id "ENSMUSG00000099737.6"; transcript_id "ENSMUST00000190528.1"; gene_type "lincRNA"; gene_name "Gm29655"; transcript_type "lincRNA"; transcript_name "Gm29655-202"; exon_number 3; exon_id "ENSMUSE00001321352.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049024.1"; havana_transcript "OTTMUST00000125236.1";
mm10-chrY	HAVANA	gene	34285082	34316611	.	+	.	gene_id "ENSMUSG00000101417.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21647"; level 2; havana_gene "OTTMUSG00000049025.1";
mm10-chrY	HAVANA	transcript	34285082	34316611	.	+	.	gene_id "ENSMUSG00000101417.1"; transcript_id "ENSMUST00000189755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21647-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049025.1"; havana_transcript "OTTMUST00000125237.1";
mm10-chrY	HAVANA	exon	34285082	34285199	.	+	.	gene_id "ENSMUSG00000101417.1"; transcript_id "ENSMUST00000189755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21647-201"; exon_number 1; exon_id "ENSMUSE00001326128.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049025.1"; havana_transcript "OTTMUST00000125237.1";
mm10-chrY	HAVANA	exon	34290514	34290580	.	+	.	gene_id "ENSMUSG00000101417.1"; transcript_id "ENSMUST00000189755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21647-201"; exon_number 2; exon_id "ENSMUSE00001335578.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049025.1"; havana_transcript "OTTMUST00000125237.1";
mm10-chrY	HAVANA	exon	34291156	34291190	.	+	.	gene_id "ENSMUSG00000101417.1"; transcript_id "ENSMUST00000189755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21647-201"; exon_number 3; exon_id "ENSMUSE00001327912.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049025.1"; havana_transcript "OTTMUST00000125237.1";
mm10-chrY	HAVANA	exon	34298211	34298277	.	+	.	gene_id "ENSMUSG00000101417.1"; transcript_id "ENSMUST00000189755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21647-201"; exon_number 4; exon_id "ENSMUSE00001318832.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049025.1"; havana_transcript "OTTMUST00000125237.1";
mm10-chrY	HAVANA	exon	34298843	34298877	.	+	.	gene_id "ENSMUSG00000101417.1"; transcript_id "ENSMUST00000189755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21647-201"; exon_number 5; exon_id "ENSMUSE00001327770.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049025.1"; havana_transcript "OTTMUST00000125237.1";
mm10-chrY	HAVANA	exon	34313144	34313261	.	+	.	gene_id "ENSMUSG00000101417.1"; transcript_id "ENSMUST00000189755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21647-201"; exon_number 6; exon_id "ENSMUSE00001329409.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049025.1"; havana_transcript "OTTMUST00000125237.1";
mm10-chrY	HAVANA	exon	34314005	34314104	.	+	.	gene_id "ENSMUSG00000101417.1"; transcript_id "ENSMUST00000189755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21647-201"; exon_number 7; exon_id "ENSMUSE00001334884.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049025.1"; havana_transcript "OTTMUST00000125237.1";
mm10-chrY	HAVANA	exon	34316129	34316225	.	+	.	gene_id "ENSMUSG00000101417.1"; transcript_id "ENSMUST00000189755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21647-201"; exon_number 8; exon_id "ENSMUSE00001332355.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049025.1"; havana_transcript "OTTMUST00000125237.1";
mm10-chrY	HAVANA	exon	34316585	34316611	.	+	.	gene_id "ENSMUSG00000101417.1"; transcript_id "ENSMUST00000189755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21647-201"; exon_number 9; exon_id "ENSMUSE00001326332.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049025.1"; havana_transcript "OTTMUST00000125237.1";
mm10-chrY	HAVANA	gene	34335629	34336075	.	+	.	gene_id "ENSMUSG00000101654.1"; gene_type "lincRNA"; gene_name "Gm29653"; level 2; havana_gene "OTTMUSG00000049026.1";
mm10-chrY	HAVANA	transcript	34335629	34336075	.	+	.	gene_id "ENSMUSG00000101654.1"; transcript_id "ENSMUST00000187192.1"; gene_type "lincRNA"; gene_name "Gm29653"; transcript_type "lincRNA"; transcript_name "Gm29653-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049026.1"; havana_transcript "OTTMUST00000125238.1";
mm10-chrY	HAVANA	exon	34335629	34335733	.	+	.	gene_id "ENSMUSG00000101654.1"; transcript_id "ENSMUST00000187192.1"; gene_type "lincRNA"; gene_name "Gm29653"; transcript_type "lincRNA"; transcript_name "Gm29653-201"; exon_number 1; exon_id "ENSMUSE00001326021.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049026.1"; havana_transcript "OTTMUST00000125238.1";
mm10-chrY	HAVANA	exon	34336015	34336075	.	+	.	gene_id "ENSMUSG00000101654.1"; transcript_id "ENSMUST00000187192.1"; gene_type "lincRNA"; gene_name "Gm29653"; transcript_type "lincRNA"; transcript_name "Gm29653-201"; exon_number 2; exon_id "ENSMUSE00001329135.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049026.1"; havana_transcript "OTTMUST00000125238.1";
mm10-chrY	HAVANA	gene	34410916	34414265	.	+	.	gene_id "ENSMUSG00000101808.1"; gene_type "lincRNA"; gene_name "Gm29654"; level 2; havana_gene "OTTMUSG00000049027.1";
mm10-chrY	HAVANA	transcript	34410916	34414265	.	+	.	gene_id "ENSMUSG00000101808.1"; transcript_id "ENSMUST00000186886.1"; gene_type "lincRNA"; gene_name "Gm29654"; transcript_type "lincRNA"; transcript_name "Gm29654-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049027.1"; havana_transcript "OTTMUST00000125239.1";
mm10-chrY	HAVANA	exon	34410916	34411138	.	+	.	gene_id "ENSMUSG00000101808.1"; transcript_id "ENSMUST00000186886.1"; gene_type "lincRNA"; gene_name "Gm29654"; transcript_type "lincRNA"; transcript_name "Gm29654-201"; exon_number 1; exon_id "ENSMUSE00001322383.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049027.1"; havana_transcript "OTTMUST00000125239.1";
mm10-chrY	HAVANA	exon	34412320	34414265	.	+	.	gene_id "ENSMUSG00000101808.1"; transcript_id "ENSMUST00000186886.1"; gene_type "lincRNA"; gene_name "Gm29654"; transcript_type "lincRNA"; transcript_name "Gm29654-201"; exon_number 2; exon_id "ENSMUSE00001333121.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000049027.1"; havana_transcript "OTTMUST00000125239.1";
mm10-chrY	HAVANA	gene	34420129	34420825	.	+	.	gene_id "ENSMUSG00000099910.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29651"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049028.1";
mm10-chrY	HAVANA	transcript	34420129	34420825	.	+	.	gene_id "ENSMUSG00000099910.1"; transcript_id "ENSMUST00000189088.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29651"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29651-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049028.1"; havana_transcript "OTTMUST00000125240.1";
mm10-chrY	HAVANA	exon	34420129	34420825	.	+	.	gene_id "ENSMUSG00000099910.1"; transcript_id "ENSMUST00000189088.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29651"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29651-201"; exon_number 1; exon_id "ENSMUSE00001320984.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049028.1"; havana_transcript "OTTMUST00000125240.1";
mm10-chrY	HAVANA	gene	34457229	34457843	.	+	.	gene_id "ENSMUSG00000099818.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29652"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049029.1";
mm10-chrY	HAVANA	transcript	34457229	34457843	.	+	.	gene_id "ENSMUSG00000099818.1"; transcript_id "ENSMUST00000188622.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29652"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29652-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049029.1"; havana_transcript "OTTMUST00000125241.1";
mm10-chrY	HAVANA	exon	34457229	34457843	.	+	.	gene_id "ENSMUSG00000099818.1"; transcript_id "ENSMUST00000188622.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29652"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29652-201"; exon_number 1; exon_id "ENSMUSE00001332846.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049029.1"; havana_transcript "OTTMUST00000125241.1";
mm10-chrY	HAVANA	gene	34468990	34470529	.	-	.	gene_id "ENSMUSG00000100500.1"; gene_type "lincRNA"; gene_name "Gm29080"; level 2; havana_gene "OTTMUSG00000049030.1";
mm10-chrY	HAVANA	transcript	34468990	34470529	.	-	.	gene_id "ENSMUSG00000100500.1"; transcript_id "ENSMUST00000188565.1"; gene_type "lincRNA"; gene_name "Gm29080"; transcript_type "lincRNA"; transcript_name "Gm29080-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049030.1"; havana_transcript "OTTMUST00000125242.1";
mm10-chrY	HAVANA	exon	34470312	34470529	.	-	.	gene_id "ENSMUSG00000100500.1"; transcript_id "ENSMUST00000188565.1"; gene_type "lincRNA"; gene_name "Gm29080"; transcript_type "lincRNA"; transcript_name "Gm29080-201"; exon_number 1; exon_id "ENSMUSE00001328594.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049030.1"; havana_transcript "OTTMUST00000125242.1";
mm10-chrY	HAVANA	exon	34468990	34469127	.	-	.	gene_id "ENSMUSG00000100500.1"; transcript_id "ENSMUST00000188565.1"; gene_type "lincRNA"; gene_name "Gm29080"; transcript_type "lincRNA"; transcript_name "Gm29080-201"; exon_number 2; exon_id "ENSMUSE00001325134.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049030.1"; havana_transcript "OTTMUST00000125242.1";
mm10-chrY	HAVANA	gene	34486834	34487526	.	+	.	gene_id "ENSMUSG00000100677.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21184"; level 2; havana_gene "OTTMUSG00000049031.1";
mm10-chrY	HAVANA	transcript	34486834	34487526	.	+	.	gene_id "ENSMUSG00000100677.1"; transcript_id "ENSMUST00000189684.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21184"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21184-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049031.1"; havana_transcript "OTTMUST00000125243.1";
mm10-chrY	HAVANA	exon	34486834	34487526	.	+	.	gene_id "ENSMUSG00000100677.1"; transcript_id "ENSMUST00000189684.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21184"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21184-201"; exon_number 1; exon_id "ENSMUSE00001319463.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049031.1"; havana_transcript "OTTMUST00000125243.1";
mm10-chrY	HAVANA	gene	34561734	34562426	.	+	.	gene_id "ENSMUSG00000100171.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21201"; level 2; havana_gene "OTTMUSG00000049032.1";
mm10-chrY	HAVANA	transcript	34561734	34562426	.	+	.	gene_id "ENSMUSG00000100171.1"; transcript_id "ENSMUST00000190814.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21201"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21201-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049032.1"; havana_transcript "OTTMUST00000125244.1";
mm10-chrY	HAVANA	exon	34561734	34562426	.	+	.	gene_id "ENSMUSG00000100171.1"; transcript_id "ENSMUST00000190814.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21201"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21201-201"; exon_number 1; exon_id "ENSMUSE00001335140.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049032.1"; havana_transcript "OTTMUST00000125244.1";
mm10-chrY	HAVANA	gene	34670134	34673374	.	-	.	gene_id "ENSMUSG00000099463.6"; gene_type "lincRNA"; gene_name "Gm29081"; level 2; havana_gene "OTTMUSG00000049033.1";
mm10-chrY	HAVANA	transcript	34670134	34673374	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000190140.6"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125245.1";
mm10-chrY	HAVANA	exon	34672734	34673374	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000190140.6"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-203"; exon_number 1; exon_id "ENSMUSE00001328105.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125245.1";
mm10-chrY	HAVANA	exon	34672063	34672248	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000190140.6"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-203"; exon_number 2; exon_id "ENSMUSE00001330293.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125245.1";
mm10-chrY	HAVANA	exon	34671150	34671333	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000190140.6"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-203"; exon_number 3; exon_id "ENSMUSE00001334942.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125245.1";
mm10-chrY	HAVANA	exon	34670134	34670622	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000190140.6"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-203"; exon_number 4; exon_id "ENSMUSE00001329245.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125245.1";
mm10-chrY	HAVANA	transcript	34670554	34672920	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000186518.6"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125246.1";
mm10-chrY	HAVANA	exon	34672734	34672920	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000186518.6"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-201"; exon_number 1; exon_id "ENSMUSE00001318904.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125246.1";
mm10-chrY	HAVANA	exon	34672063	34672244	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000186518.6"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-201"; exon_number 2; exon_id "ENSMUSE00001323769.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125246.1";
mm10-chrY	HAVANA	exon	34671150	34671333	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000186518.6"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-201"; exon_number 3; exon_id "ENSMUSE00001334942.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125246.1";
mm10-chrY	HAVANA	exon	34670554	34670622	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000186518.6"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-201"; exon_number 4; exon_id "ENSMUSE00001329051.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125246.1";
mm10-chrY	HAVANA	transcript	34670554	34672920	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000188696.1"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125247.1";
mm10-chrY	HAVANA	exon	34672734	34672920	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000188696.1"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-202"; exon_number 1; exon_id "ENSMUSE00001318904.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125247.1";
mm10-chrY	HAVANA	exon	34672063	34672244	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000188696.1"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-202"; exon_number 2; exon_id "ENSMUSE00001323769.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125247.1";
mm10-chrY	HAVANA	exon	34670554	34670622	.	-	.	gene_id "ENSMUSG00000099463.6"; transcript_id "ENSMUST00000188696.1"; gene_type "lincRNA"; gene_name "Gm29081"; transcript_type "lincRNA"; transcript_name "Gm29081-202"; exon_number 3; exon_id "ENSMUSE00001329051.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049033.1"; havana_transcript "OTTMUST00000125247.1";
mm10-chrY	HAVANA	gene	34705341	34708688	.	+	.	gene_id "ENSMUSG00000100745.1"; gene_type "lincRNA"; gene_name "Gm29077"; level 2; havana_gene "OTTMUSG00000049034.1";
mm10-chrY	HAVANA	transcript	34705341	34708688	.	+	.	gene_id "ENSMUSG00000100745.1"; transcript_id "ENSMUST00000185784.1"; gene_type "lincRNA"; gene_name "Gm29077"; transcript_type "lincRNA"; transcript_name "Gm29077-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049034.1"; havana_transcript "OTTMUST00000125248.1";
mm10-chrY	HAVANA	exon	34705341	34705563	.	+	.	gene_id "ENSMUSG00000100745.1"; transcript_id "ENSMUST00000185784.1"; gene_type "lincRNA"; gene_name "Gm29077"; transcript_type "lincRNA"; transcript_name "Gm29077-201"; exon_number 1; exon_id "ENSMUSE00001329242.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049034.1"; havana_transcript "OTTMUST00000125248.1";
mm10-chrY	HAVANA	exon	34706743	34708688	.	+	.	gene_id "ENSMUSG00000100745.1"; transcript_id "ENSMUST00000185784.1"; gene_type "lincRNA"; gene_name "Gm29077"; transcript_type "lincRNA"; transcript_name "Gm29077-201"; exon_number 2; exon_id "ENSMUSE00001332138.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049034.1"; havana_transcript "OTTMUST00000125248.1";
mm10-chrY	HAVANA	gene	34714548	34715244	.	+	.	gene_id "ENSMUSG00000101341.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29076"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049035.1";
mm10-chrY	HAVANA	transcript	34714548	34715244	.	+	.	gene_id "ENSMUSG00000101341.1"; transcript_id "ENSMUST00000187689.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29076"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29076-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049035.1"; havana_transcript "OTTMUST00000125249.1";
mm10-chrY	HAVANA	exon	34714548	34715244	.	+	.	gene_id "ENSMUSG00000101341.1"; transcript_id "ENSMUST00000187689.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29076"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29076-201"; exon_number 1; exon_id "ENSMUSE00001327186.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049035.1"; havana_transcript "OTTMUST00000125249.1";
mm10-chrY	HAVANA	gene	34751370	34751984	.	+	.	gene_id "ENSMUSG00000100193.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29079"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049036.1";
mm10-chrY	HAVANA	transcript	34751370	34751984	.	+	.	gene_id "ENSMUSG00000100193.1"; transcript_id "ENSMUST00000188875.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29079"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29079-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049036.1"; havana_transcript "OTTMUST00000125250.1";
mm10-chrY	HAVANA	exon	34751370	34751984	.	+	.	gene_id "ENSMUSG00000100193.1"; transcript_id "ENSMUST00000188875.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29079"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29079-201"; exon_number 1; exon_id "ENSMUSE00001325415.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049036.1"; havana_transcript "OTTMUST00000125250.1";
mm10-chrY	HAVANA	gene	34763132	34764675	.	-	.	gene_id "ENSMUSG00000099651.1"; gene_type "lincRNA"; gene_name "Gm29078"; level 2; havana_gene "OTTMUSG00000049037.1";
mm10-chrY	HAVANA	transcript	34763132	34764675	.	-	.	gene_id "ENSMUSG00000099651.1"; transcript_id "ENSMUST00000190611.1"; gene_type "lincRNA"; gene_name "Gm29078"; transcript_type "lincRNA"; transcript_name "Gm29078-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049037.1"; havana_transcript "OTTMUST00000125251.1";
mm10-chrY	HAVANA	exon	34764458	34764675	.	-	.	gene_id "ENSMUSG00000099651.1"; transcript_id "ENSMUST00000190611.1"; gene_type "lincRNA"; gene_name "Gm29078"; transcript_type "lincRNA"; transcript_name "Gm29078-201"; exon_number 1; exon_id "ENSMUSE00001321544.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049037.1"; havana_transcript "OTTMUST00000125251.1";
mm10-chrY	HAVANA	exon	34763132	34763269	.	-	.	gene_id "ENSMUSG00000099651.1"; transcript_id "ENSMUST00000190611.1"; gene_type "lincRNA"; gene_name "Gm29078"; transcript_type "lincRNA"; transcript_name "Gm29078-201"; exon_number 2; exon_id "ENSMUSE00001318156.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049037.1"; havana_transcript "OTTMUST00000125251.1";
mm10-chrY	HAVANA	gene	34781126	34781818	.	+	.	gene_id "ENSMUSG00000101787.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20853"; level 2; havana_gene "OTTMUSG00000049038.1";
mm10-chrY	HAVANA	transcript	34781126	34781818	.	+	.	gene_id "ENSMUSG00000101787.1"; transcript_id "ENSMUST00000189591.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20853-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049038.1"; havana_transcript "OTTMUST00000125252.1";
mm10-chrY	HAVANA	exon	34781126	34781818	.	+	.	gene_id "ENSMUSG00000101787.1"; transcript_id "ENSMUST00000189591.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20853"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20853-201"; exon_number 1; exon_id "ENSMUSE00001318421.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049038.1"; havana_transcript "OTTMUST00000125252.1";
mm10-chrY	HAVANA	gene	34855792	34856487	.	+	.	gene_id "ENSMUSG00000101043.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29075"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049039.1";
mm10-chrY	HAVANA	transcript	34855792	34856487	.	+	.	gene_id "ENSMUSG00000101043.1"; transcript_id "ENSMUST00000185717.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29075"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29075-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049039.1"; havana_transcript "OTTMUST00000125253.1";
mm10-chrY	HAVANA	exon	34855792	34856487	.	+	.	gene_id "ENSMUSG00000101043.1"; transcript_id "ENSMUST00000185717.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29075"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29075-201"; exon_number 1; exon_id "ENSMUSE00001333768.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049039.1"; havana_transcript "OTTMUST00000125253.1";
mm10-chrY	HAVANA	gene	34963858	34967095	.	-	.	gene_id "ENSMUSG00000099390.6"; gene_type "lincRNA"; gene_name "Gm29225"; level 2; havana_gene "OTTMUSG00000049040.1";
mm10-chrY	HAVANA	transcript	34963858	34967095	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000188647.6"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125254.1";
mm10-chrY	HAVANA	exon	34966457	34967095	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000188647.6"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-202"; exon_number 1; exon_id "ENSMUSE00001325155.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125254.1";
mm10-chrY	HAVANA	exon	34965786	34965971	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000188647.6"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-202"; exon_number 2; exon_id "ENSMUSE00001328756.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125254.1";
mm10-chrY	HAVANA	exon	34964873	34965056	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000188647.6"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-202"; exon_number 3; exon_id "ENSMUSE00001325756.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125254.1";
mm10-chrY	HAVANA	exon	34963858	34964346	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000188647.6"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-202"; exon_number 4; exon_id "ENSMUSE00001334989.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125254.1";
mm10-chrY	HAVANA	transcript	34964278	34966642	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000188510.6"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125255.1";
mm10-chrY	HAVANA	exon	34966457	34966642	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000188510.6"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-201"; exon_number 1; exon_id "ENSMUSE00001332865.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125255.1";
mm10-chrY	HAVANA	exon	34965786	34965967	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000188510.6"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-201"; exon_number 2; exon_id "ENSMUSE00001330783.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125255.1";
mm10-chrY	HAVANA	exon	34964873	34965056	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000188510.6"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-201"; exon_number 3; exon_id "ENSMUSE00001325756.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125255.1";
mm10-chrY	HAVANA	exon	34964278	34964346	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000188510.6"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-201"; exon_number 4; exon_id "ENSMUSE00001324696.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125255.1";
mm10-chrY	HAVANA	transcript	34964278	34966642	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000191180.1"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125256.1";
mm10-chrY	HAVANA	exon	34966457	34966642	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000191180.1"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-203"; exon_number 1; exon_id "ENSMUSE00001332865.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125256.1";
mm10-chrY	HAVANA	exon	34965786	34965967	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000191180.1"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-203"; exon_number 2; exon_id "ENSMUSE00001330783.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125256.1";
mm10-chrY	HAVANA	exon	34964278	34964346	.	-	.	gene_id "ENSMUSG00000099390.6"; transcript_id "ENSMUST00000191180.1"; gene_type "lincRNA"; gene_name "Gm29225"; transcript_type "lincRNA"; transcript_name "Gm29225-203"; exon_number 3; exon_id "ENSMUSE00001324696.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049040.1"; havana_transcript "OTTMUST00000125256.1";
mm10-chrY	HAVANA	gene	34999098	35002441	.	+	.	gene_id "ENSMUSG00000100422.1"; gene_type "lincRNA"; gene_name "Gm29226"; level 2; havana_gene "OTTMUSG00000049041.1";
mm10-chrY	HAVANA	transcript	34999098	35002441	.	+	.	gene_id "ENSMUSG00000100422.1"; transcript_id "ENSMUST00000186871.1"; gene_type "lincRNA"; gene_name "Gm29226"; transcript_type "lincRNA"; transcript_name "Gm29226-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049041.1"; havana_transcript "OTTMUST00000125257.1";
mm10-chrY	HAVANA	exon	34999098	34999320	.	+	.	gene_id "ENSMUSG00000100422.1"; transcript_id "ENSMUST00000186871.1"; gene_type "lincRNA"; gene_name "Gm29226"; transcript_type "lincRNA"; transcript_name "Gm29226-201"; exon_number 1; exon_id "ENSMUSE00001324122.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049041.1"; havana_transcript "OTTMUST00000125257.1";
mm10-chrY	HAVANA	exon	35000498	35002441	.	+	.	gene_id "ENSMUSG00000100422.1"; transcript_id "ENSMUST00000186871.1"; gene_type "lincRNA"; gene_name "Gm29226"; transcript_type "lincRNA"; transcript_name "Gm29226-201"; exon_number 2; exon_id "ENSMUSE00001335773.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049041.1"; havana_transcript "OTTMUST00000125257.1";
mm10-chrY	HAVANA	gene	35003853	35004167	.	+	.	gene_id "ENSMUSG00000100385.1"; gene_type "processed_pseudogene"; gene_name "Gm29227"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000049042.1";
mm10-chrY	HAVANA	transcript	35003853	35004167	.	+	.	gene_id "ENSMUSG00000100385.1"; transcript_id "ENSMUST00000187139.1"; gene_type "processed_pseudogene"; gene_name "Gm29227"; transcript_type "processed_pseudogene"; transcript_name "Gm29227-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049042.1"; havana_transcript "OTTMUST00000125258.1";
mm10-chrY	HAVANA	exon	35003853	35004167	.	+	.	gene_id "ENSMUSG00000100385.1"; transcript_id "ENSMUST00000187139.1"; gene_type "processed_pseudogene"; gene_name "Gm29227"; transcript_type "processed_pseudogene"; transcript_name "Gm29227-201"; exon_number 1; exon_id "ENSMUSE00001333231.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000049042.1"; havana_transcript "OTTMUST00000125258.1";
mm10-chrY	HAVANA	gene	35040387	35041082	.	+	.	gene_id "ENSMUSG00000100064.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28339"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048897.1";
mm10-chrY	HAVANA	transcript	35040387	35041082	.	+	.	gene_id "ENSMUSG00000100064.1"; transcript_id "ENSMUST00000185845.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28339"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28339-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048897.1"; havana_transcript "OTTMUST00000125005.1";
mm10-chrY	HAVANA	exon	35040387	35041082	.	+	.	gene_id "ENSMUSG00000100064.1"; transcript_id "ENSMUST00000185845.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28339"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28339-201"; exon_number 1; exon_id "ENSMUSE00001333787.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048897.1"; havana_transcript "OTTMUST00000125005.1";
mm10-chrY	HAVANA	gene	35105684	35131833	.	-	.	gene_id "ENSMUSG00000095793.7"; gene_type "protein_coding"; gene_name "Gm20855"; level 2; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	HAVANA	transcript	35105684	35131833	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	exon	35131790	35131833	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 1; exon_id "ENSMUSE00001325870.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	exon	35130296	35130427	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 2; exon_id "ENSMUSE00001321645.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	CDS	35130296	35130413	.	-	0	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 2; exon_id "ENSMUSE00001321645.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	start_codon	35130411	35130413	.	-	0	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 2; exon_id "ENSMUSE00001321645.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	exon	35124894	35124960	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 3; exon_id "ENSMUSE00001090651.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	CDS	35124894	35124960	.	-	2	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 3; exon_id "ENSMUSE00001090651.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	exon	35124226	35124260	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 4; exon_id "ENSMUSE00000975802.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	CDS	35124226	35124260	.	-	1	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 4; exon_id "ENSMUSE00000975802.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	exon	35117136	35117202	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 5; exon_id "ENSMUSE00001080871.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	CDS	35117136	35117202	.	-	2	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 5; exon_id "ENSMUSE00001080871.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	exon	35116524	35116558	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 6; exon_id "ENSMUSE00000980423.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	CDS	35116524	35116558	.	-	1	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 6; exon_id "ENSMUSE00000980423.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	exon	35109258	35109375	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 7; exon_id "ENSMUSE00001019831.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	CDS	35109258	35109375	.	-	2	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 7; exon_id "ENSMUSE00001019831.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	exon	35108408	35108507	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 8; exon_id "ENSMUSE00001327072.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	CDS	35108408	35108507	.	-	1	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 8; exon_id "ENSMUSE00001327072.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	exon	35106270	35106368	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 9; exon_id "ENSMUSE00001319091.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	CDS	35106270	35106368	.	-	0	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 9; exon_id "ENSMUSE00001319091.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	exon	35105684	35105910	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 10; exon_id "ENSMUSE00001323784.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	CDS	35105884	35105910	.	-	0	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 10; exon_id "ENSMUSE00001323784.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	stop_codon	35105881	35105883	.	-	0	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 10; exon_id "ENSMUSE00001323784.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	UTR	35131790	35131833	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 1; exon_id "ENSMUSE00001325870.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	UTR	35130414	35130427	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 2; exon_id "ENSMUSE00001321645.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	HAVANA	UTR	35105684	35105883	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000186996.6"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-202"; exon_number 10; exon_id "ENSMUSE00001323784.1"; level 2; protein_id "ENSMUSP00000140500.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048976.1"; havana_transcript "OTTMUST00000125124.1";
mm10-chrY	ENSEMBL	transcript	35108441	35130404	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	exon	35130296	35130404	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 1; exon_id "ENSMUSE00001075211.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	CDS	35130296	35130404	.	-	0	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 1; exon_id "ENSMUSE00001075211.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	start_codon	35130402	35130404	.	-	0	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 1; exon_id "ENSMUSE00001075211.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	exon	35124894	35124960	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 2; exon_id "ENSMUSE00001090651.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	CDS	35124894	35124960	.	-	2	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 2; exon_id "ENSMUSE00001090651.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	exon	35124226	35124260	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 3; exon_id "ENSMUSE00000975802.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	CDS	35124226	35124260	.	-	1	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 3; exon_id "ENSMUSE00000975802.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	exon	35117136	35117202	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 4; exon_id "ENSMUSE00001080871.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	CDS	35117136	35117202	.	-	2	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 4; exon_id "ENSMUSE00001080871.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	exon	35116524	35116558	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 5; exon_id "ENSMUSE00000980423.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	CDS	35116524	35116558	.	-	1	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 5; exon_id "ENSMUSE00000980423.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	exon	35109258	35109375	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 6; exon_id "ENSMUSE00001019831.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	CDS	35109258	35109375	.	-	2	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 6; exon_id "ENSMUSE00001019831.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	exon	35108441	35108507	.	-	.	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 7; exon_id "ENSMUSE00001065913.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	ENSEMBL	CDS	35108441	35108507	.	-	1	gene_id "ENSMUSG00000095793.7"; transcript_id "ENSMUST00000180170.1"; gene_type "protein_coding"; gene_name "Gm20855"; transcript_type "protein_coding"; transcript_name "Gm20855-201"; exon_number 7; exon_id "ENSMUSE00001065913.1"; level 3; protein_id "ENSMUSP00000137350.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048976.1";
mm10-chrY	HAVANA	gene	35190746	35193986	.	-	.	gene_id "ENSMUSG00000101626.6"; gene_type "lincRNA"; gene_name "Gm29386"; level 2; havana_gene "OTTMUSG00000048977.1";
mm10-chrY	HAVANA	transcript	35190746	35193986	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000191185.6"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125125.1";
mm10-chrY	HAVANA	exon	35193346	35193986	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000191185.6"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-203"; exon_number 1; exon_id "ENSMUSE00001334120.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125125.1";
mm10-chrY	HAVANA	exon	35192675	35192860	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000191185.6"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-203"; exon_number 2; exon_id "ENSMUSE00001327495.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125125.1";
mm10-chrY	HAVANA	exon	35191762	35191945	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000191185.6"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-203"; exon_number 3; exon_id "ENSMUSE00001320156.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125125.1";
mm10-chrY	HAVANA	exon	35190746	35191234	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000191185.6"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-203"; exon_number 4; exon_id "ENSMUSE00001335233.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125125.1";
mm10-chrY	HAVANA	transcript	35191166	35193532	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000188128.6"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125126.1";
mm10-chrY	HAVANA	exon	35193346	35193532	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000188128.6"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-202"; exon_number 1; exon_id "ENSMUSE00001333570.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125126.1";
mm10-chrY	HAVANA	exon	35192675	35192856	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000188128.6"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-202"; exon_number 2; exon_id "ENSMUSE00001332631.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125126.1";
mm10-chrY	HAVANA	exon	35191166	35191234	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000188128.6"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-202"; exon_number 3; exon_id "ENSMUSE00001320222.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125126.1";
mm10-chrY	HAVANA	transcript	35191166	35193532	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000186775.1"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125127.1";
mm10-chrY	HAVANA	exon	35193346	35193532	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000186775.1"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-201"; exon_number 1; exon_id "ENSMUSE00001333570.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125127.1";
mm10-chrY	HAVANA	exon	35192675	35192856	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000186775.1"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-201"; exon_number 2; exon_id "ENSMUSE00001332631.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125127.1";
mm10-chrY	HAVANA	exon	35191762	35191945	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000186775.1"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-201"; exon_number 3; exon_id "ENSMUSE00001320156.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125127.1";
mm10-chrY	HAVANA	exon	35191166	35191234	.	-	.	gene_id "ENSMUSG00000101626.6"; transcript_id "ENSMUST00000186775.1"; gene_type "lincRNA"; gene_name "Gm29386"; transcript_type "lincRNA"; transcript_name "Gm29386-201"; exon_number 4; exon_id "ENSMUSE00001320222.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048977.1"; havana_transcript "OTTMUST00000125127.1";
mm10-chrY	HAVANA	gene	35225889	35229236	.	+	.	gene_id "ENSMUSG00000101091.1"; gene_type "lincRNA"; gene_name "Gm29384"; level 2; havana_gene "OTTMUSG00000048978.1";
mm10-chrY	HAVANA	transcript	35225889	35229236	.	+	.	gene_id "ENSMUSG00000101091.1"; transcript_id "ENSMUST00000190852.1"; gene_type "lincRNA"; gene_name "Gm29384"; transcript_type "lincRNA"; transcript_name "Gm29384-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048978.1"; havana_transcript "OTTMUST00000125128.1";
mm10-chrY	HAVANA	exon	35225889	35226111	.	+	.	gene_id "ENSMUSG00000101091.1"; transcript_id "ENSMUST00000190852.1"; gene_type "lincRNA"; gene_name "Gm29384"; transcript_type "lincRNA"; transcript_name "Gm29384-201"; exon_number 1; exon_id "ENSMUSE00001332223.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048978.1"; havana_transcript "OTTMUST00000125128.1";
mm10-chrY	HAVANA	exon	35227292	35229236	.	+	.	gene_id "ENSMUSG00000101091.1"; transcript_id "ENSMUST00000190852.1"; gene_type "lincRNA"; gene_name "Gm29384"; transcript_type "lincRNA"; transcript_name "Gm29384-201"; exon_number 2; exon_id "ENSMUSE00001323757.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048978.1"; havana_transcript "OTTMUST00000125128.1";
mm10-chrY	HAVANA	gene	35235339	35236034	.	+	.	gene_id "ENSMUSG00000100229.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21896"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048979.1";
mm10-chrY	HAVANA	transcript	35235339	35236034	.	+	.	gene_id "ENSMUSG00000100229.1"; transcript_id "ENSMUST00000186520.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21896"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21896-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048979.1"; havana_transcript "OTTMUST00000125129.1";
mm10-chrY	HAVANA	exon	35235339	35236034	.	+	.	gene_id "ENSMUSG00000100229.1"; transcript_id "ENSMUST00000186520.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21896"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21896-201"; exon_number 1; exon_id "ENSMUSE00001326177.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048979.1"; havana_transcript "OTTMUST00000125129.1";
mm10-chrY	HAVANA	gene	35271723	35272337	.	+	.	gene_id "ENSMUSG00000101691.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29280"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048992.1";
mm10-chrY	HAVANA	transcript	35271723	35272337	.	+	.	gene_id "ENSMUSG00000101691.1"; transcript_id "ENSMUST00000188571.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29280"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29280-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048992.1"; havana_transcript "OTTMUST00000125157.1";
mm10-chrY	HAVANA	exon	35271723	35272337	.	+	.	gene_id "ENSMUSG00000101691.1"; transcript_id "ENSMUST00000188571.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29280"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29280-201"; exon_number 1; exon_id "ENSMUSE00001327002.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048992.1"; havana_transcript "OTTMUST00000125157.1";
mm10-chrY	HAVANA	gene	35301254	35301949	.	+	.	gene_id "ENSMUSG00000100540.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20799"; level 2; havana_gene "OTTMUSG00000048993.1";
mm10-chrY	HAVANA	transcript	35301254	35301949	.	+	.	gene_id "ENSMUSG00000100540.1"; transcript_id "ENSMUST00000185833.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20799"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20799-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048993.1"; havana_transcript "OTTMUST00000125158.1";
mm10-chrY	HAVANA	exon	35301254	35301949	.	+	.	gene_id "ENSMUSG00000100540.1"; transcript_id "ENSMUST00000185833.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20799"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20799-201"; exon_number 1; exon_id "ENSMUSE00001331662.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048993.1"; havana_transcript "OTTMUST00000125158.1";
mm10-chrY	HAVANA	gene	35350343	35351038	.	+	.	gene_id "ENSMUSG00000100244.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29279"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048994.1";
mm10-chrY	HAVANA	transcript	35350343	35351038	.	+	.	gene_id "ENSMUSG00000100244.1"; transcript_id "ENSMUST00000190324.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29279"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29279-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048994.1"; havana_transcript "OTTMUST00000125159.1";
mm10-chrY	HAVANA	exon	35350343	35351038	.	+	.	gene_id "ENSMUSG00000100244.1"; transcript_id "ENSMUST00000190324.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29279"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29279-201"; exon_number 1; exon_id "ENSMUSE00001332929.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048994.1"; havana_transcript "OTTMUST00000125159.1";
mm10-chrY	HAVANA	gene	35458446	35461685	.	-	.	gene_id "ENSMUSG00000099799.6"; gene_type "lincRNA"; gene_name "Gm28260"; level 2; havana_gene "OTTMUSG00000048995.1";
mm10-chrY	HAVANA	transcript	35458446	35461685	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000187337.6"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125160.1";
mm10-chrY	HAVANA	exon	35461046	35461685	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000187337.6"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-201"; exon_number 1; exon_id "ENSMUSE00001322658.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125160.1";
mm10-chrY	HAVANA	exon	35460375	35460560	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000187337.6"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-201"; exon_number 2; exon_id "ENSMUSE00001323933.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125160.1";
mm10-chrY	HAVANA	exon	35459462	35459645	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000187337.6"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-201"; exon_number 3; exon_id "ENSMUSE00001318511.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125160.1";
mm10-chrY	HAVANA	exon	35458446	35458934	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000187337.6"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-201"; exon_number 4; exon_id "ENSMUSE00001318734.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125160.1";
mm10-chrY	HAVANA	transcript	35458866	35461232	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000188438.6"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125161.1";
mm10-chrY	HAVANA	exon	35461046	35461232	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000188438.6"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-202"; exon_number 1; exon_id "ENSMUSE00001335419.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125161.1";
mm10-chrY	HAVANA	exon	35460375	35460556	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000188438.6"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-202"; exon_number 2; exon_id "ENSMUSE00001330484.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125161.1";
mm10-chrY	HAVANA	exon	35459462	35459645	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000188438.6"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-202"; exon_number 3; exon_id "ENSMUSE00001318511.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125161.1";
mm10-chrY	HAVANA	exon	35458866	35458934	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000188438.6"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-202"; exon_number 4; exon_id "ENSMUSE00001325649.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125161.1";
mm10-chrY	HAVANA	transcript	35458866	35461232	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000190622.1"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125162.1";
mm10-chrY	HAVANA	exon	35461046	35461232	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000190622.1"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-203"; exon_number 1; exon_id "ENSMUSE00001335419.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125162.1";
mm10-chrY	HAVANA	exon	35460375	35460556	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000190622.1"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-203"; exon_number 2; exon_id "ENSMUSE00001330484.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125162.1";
mm10-chrY	HAVANA	exon	35458866	35458934	.	-	.	gene_id "ENSMUSG00000099799.6"; transcript_id "ENSMUST00000190622.1"; gene_type "lincRNA"; gene_name "Gm28260"; transcript_type "lincRNA"; transcript_name "Gm28260-203"; exon_number 3; exon_id "ENSMUSE00001325649.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048995.1"; havana_transcript "OTTMUST00000125162.1";
mm10-chrY	HAVANA	gene	35503065	35503760	.	+	.	gene_id "ENSMUSG00000099999.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21795"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048996.1";
mm10-chrY	HAVANA	transcript	35503065	35503760	.	+	.	gene_id "ENSMUSG00000099999.1"; transcript_id "ENSMUST00000187263.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21795"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21795-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048996.1"; havana_transcript "OTTMUST00000125163.1";
mm10-chrY	HAVANA	exon	35503065	35503760	.	+	.	gene_id "ENSMUSG00000099999.1"; transcript_id "ENSMUST00000187263.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21795"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21795-201"; exon_number 1; exon_id "ENSMUSE00001323122.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048996.1"; havana_transcript "OTTMUST00000125163.1";
mm10-chrY	HAVANA	gene	35539957	35540571	.	+	.	gene_id "ENSMUSG00000101806.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28261"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048997.1";
mm10-chrY	HAVANA	transcript	35539957	35540571	.	+	.	gene_id "ENSMUSG00000101806.1"; transcript_id "ENSMUST00000186417.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28261"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28261-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048997.1"; havana_transcript "OTTMUST00000125164.1";
mm10-chrY	HAVANA	exon	35539957	35540571	.	+	.	gene_id "ENSMUSG00000101806.1"; transcript_id "ENSMUST00000186417.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28261"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28261-201"; exon_number 1; exon_id "ENSMUSE00001331764.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048997.1"; havana_transcript "OTTMUST00000125164.1";
mm10-chrY	HAVANA	gene	35551683	35553266	.	-	.	gene_id "ENSMUSG00000101632.1"; gene_type "lincRNA"; gene_name "Gm28264"; level 2; havana_gene "OTTMUSG00000048998.1";
mm10-chrY	HAVANA	transcript	35551683	35553266	.	-	.	gene_id "ENSMUSG00000101632.1"; transcript_id "ENSMUST00000190657.1"; gene_type "lincRNA"; gene_name "Gm28264"; transcript_type "lincRNA"; transcript_name "Gm28264-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048998.1"; havana_transcript "OTTMUST00000125165.1";
mm10-chrY	HAVANA	exon	35553031	35553266	.	-	.	gene_id "ENSMUSG00000101632.1"; transcript_id "ENSMUST00000190657.1"; gene_type "lincRNA"; gene_name "Gm28264"; transcript_type "lincRNA"; transcript_name "Gm28264-201"; exon_number 1; exon_id "ENSMUSE00001326749.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048998.1"; havana_transcript "OTTMUST00000125165.1";
mm10-chrY	HAVANA	exon	35551683	35551844	.	-	.	gene_id "ENSMUSG00000101632.1"; transcript_id "ENSMUST00000190657.1"; gene_type "lincRNA"; gene_name "Gm28264"; transcript_type "lincRNA"; transcript_name "Gm28264-201"; exon_number 2; exon_id "ENSMUSE00001319151.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048998.1"; havana_transcript "OTTMUST00000125165.1";
mm10-chrY	HAVANA	gene	35569482	35570159	.	+	.	gene_id "ENSMUSG00000099525.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21872"; level 2; havana_gene "OTTMUSG00000048999.1";
mm10-chrY	HAVANA	transcript	35569482	35570159	.	+	.	gene_id "ENSMUSG00000099525.1"; transcript_id "ENSMUST00000191488.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21872"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21872-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048999.1"; havana_transcript "OTTMUST00000125166.1";
mm10-chrY	HAVANA	exon	35569482	35570159	.	+	.	gene_id "ENSMUSG00000099525.1"; transcript_id "ENSMUST00000191488.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21872"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21872-201"; exon_number 1; exon_id "ENSMUSE00001319301.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048999.1"; havana_transcript "OTTMUST00000125166.1";
mm10-chrY	HAVANA	gene	35644173	35644868	.	+	.	gene_id "ENSMUSG00000100749.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20798"; level 2; havana_gene "OTTMUSG00000049000.1";
mm10-chrY	HAVANA	transcript	35644173	35644868	.	+	.	gene_id "ENSMUSG00000100749.1"; transcript_id "ENSMUST00000191050.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20798-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049000.1"; havana_transcript "OTTMUST00000125167.1";
mm10-chrY	HAVANA	exon	35644173	35644868	.	+	.	gene_id "ENSMUSG00000100749.1"; transcript_id "ENSMUST00000191050.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20798"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20798-201"; exon_number 1; exon_id "ENSMUSE00001333788.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000049000.1"; havana_transcript "OTTMUST00000125167.1";
mm10-chrY	HAVANA	gene	35761786	35765015	.	-	.	gene_id "ENSMUSG00000099963.6"; gene_type "lincRNA"; gene_name "Gm28463"; level 2; havana_gene "OTTMUSG00000049001.1";
mm10-chrY	HAVANA	transcript	35761786	35765015	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000191085.6"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125168.1";
mm10-chrY	HAVANA	exon	35764377	35765015	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000191085.6"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-203"; exon_number 1; exon_id "ENSMUSE00001321579.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125168.1";
mm10-chrY	HAVANA	exon	35763713	35763898	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000191085.6"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-203"; exon_number 2; exon_id "ENSMUSE00001320144.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125168.1";
mm10-chrY	HAVANA	exon	35762801	35762984	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000191085.6"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-203"; exon_number 3; exon_id "ENSMUSE00001318745.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125168.1";
mm10-chrY	HAVANA	exon	35761786	35762274	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000191085.6"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-203"; exon_number 4; exon_id "ENSMUSE00001333199.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125168.1";
mm10-chrY	HAVANA	transcript	35762206	35764562	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000185506.6"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125169.1";
mm10-chrY	HAVANA	exon	35764377	35764562	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000185506.6"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-202"; exon_number 1; exon_id "ENSMUSE00001330885.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125169.1";
mm10-chrY	HAVANA	exon	35763713	35763894	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000185506.6"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-202"; exon_number 2; exon_id "ENSMUSE00001318840.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125169.1";
mm10-chrY	HAVANA	exon	35762801	35762984	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000185506.6"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-202"; exon_number 3; exon_id "ENSMUSE00001318745.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125169.1";
mm10-chrY	HAVANA	exon	35762206	35762274	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000185506.6"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-202"; exon_number 4; exon_id "ENSMUSE00001323920.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125169.1";
mm10-chrY	HAVANA	transcript	35762206	35764562	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000185420.1"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125170.1";
mm10-chrY	HAVANA	exon	35764377	35764562	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000185420.1"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-201"; exon_number 1; exon_id "ENSMUSE00001330885.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125170.1";
mm10-chrY	HAVANA	exon	35763713	35763894	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000185420.1"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-201"; exon_number 2; exon_id "ENSMUSE00001318840.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125170.1";
mm10-chrY	HAVANA	exon	35762206	35762274	.	-	.	gene_id "ENSMUSG00000099963.6"; transcript_id "ENSMUST00000185420.1"; gene_type "lincRNA"; gene_name "Gm28463"; transcript_type "lincRNA"; transcript_name "Gm28463-201"; exon_number 3; exon_id "ENSMUSE00001323920.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000049001.1"; havana_transcript "OTTMUST00000125170.1";
mm10-chrY	HAVANA	gene	35834412	35835107	.	+	.	gene_id "ENSMUSG00000100299.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28584"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048762.1";
mm10-chrY	HAVANA	transcript	35834412	35835107	.	+	.	gene_id "ENSMUSG00000100299.1"; transcript_id "ENSMUST00000191489.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28584"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28584-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048762.1"; havana_transcript "OTTMUST00000124778.1";
mm10-chrY	HAVANA	exon	35834412	35835107	.	+	.	gene_id "ENSMUSG00000100299.1"; transcript_id "ENSMUST00000191489.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28584"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28584-201"; exon_number 1; exon_id "ENSMUSE00001326647.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048762.1"; havana_transcript "OTTMUST00000124778.1";
mm10-chrY	HAVANA	gene	35863133	35864155	.	+	.	gene_id "ENSMUSG00000101127.1"; gene_type "lincRNA"; gene_name "Gm28585"; level 2; havana_gene "OTTMUSG00000048763.1";
mm10-chrY	HAVANA	transcript	35863133	35864155	.	+	.	gene_id "ENSMUSG00000101127.1"; transcript_id "ENSMUST00000187587.1"; gene_type "lincRNA"; gene_name "Gm28585"; transcript_type "lincRNA"; transcript_name "Gm28585-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048763.1"; havana_transcript "OTTMUST00000124779.1";
mm10-chrY	HAVANA	exon	35863133	35863403	.	+	.	gene_id "ENSMUSG00000101127.1"; transcript_id "ENSMUST00000187587.1"; gene_type "lincRNA"; gene_name "Gm28585"; transcript_type "lincRNA"; transcript_name "Gm28585-201"; exon_number 1; exon_id "ENSMUSE00001319989.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048763.1"; havana_transcript "OTTMUST00000124779.1";
mm10-chrY	HAVANA	exon	35863985	35864155	.	+	.	gene_id "ENSMUSG00000101127.1"; transcript_id "ENSMUST00000187587.1"; gene_type "lincRNA"; gene_name "Gm28585"; transcript_type "lincRNA"; transcript_name "Gm28585-201"; exon_number 2; exon_id "ENSMUSE00001321473.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048763.1"; havana_transcript "OTTMUST00000124779.1";
mm10-chrY	HAVANA	gene	35895328	35921526	.	-	.	gene_id "ENSMUSG00000096650.7"; gene_type "protein_coding"; gene_name "Gm20896"; level 2; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	HAVANA	transcript	35895328	35921526	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	exon	35921486	35921526	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 1; exon_id "ENSMUSE00001324680.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	exon	35919989	35920120	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 2; exon_id "ENSMUSE00001320590.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	CDS	35919989	35920106	.	-	0	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 2; exon_id "ENSMUSE00001320590.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	start_codon	35920104	35920106	.	-	0	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 2; exon_id "ENSMUSE00001320590.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	exon	35914584	35914650	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 3; exon_id "ENSMUSE00000973168.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	CDS	35914584	35914650	.	-	2	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 3; exon_id "ENSMUSE00000973168.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	exon	35913918	35913952	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 4; exon_id "ENSMUSE00001003954.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	CDS	35913918	35913952	.	-	1	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 4; exon_id "ENSMUSE00001003954.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	exon	35906832	35906898	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 5; exon_id "ENSMUSE00001050482.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	CDS	35906832	35906898	.	-	2	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 5; exon_id "ENSMUSE00001050482.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	exon	35906222	35906256	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 6; exon_id "ENSMUSE00001072882.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	CDS	35906222	35906256	.	-	1	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 6; exon_id "ENSMUSE00001072882.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	exon	35898923	35899040	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 7; exon_id "ENSMUSE00000989218.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	CDS	35898923	35899040	.	-	2	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 7; exon_id "ENSMUSE00000989218.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	exon	35898060	35898159	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 8; exon_id "ENSMUSE00001318092.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	CDS	35898060	35898159	.	-	1	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 8; exon_id "ENSMUSE00001318092.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	exon	35895914	35896012	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 9; exon_id "ENSMUSE00001328761.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	CDS	35895914	35896012	.	-	0	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 9; exon_id "ENSMUSE00001328761.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	exon	35895328	35895554	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 10; exon_id "ENSMUSE00001333170.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	CDS	35895528	35895554	.	-	0	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 10; exon_id "ENSMUSE00001333170.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	stop_codon	35895525	35895527	.	-	0	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 10; exon_id "ENSMUSE00001333170.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	UTR	35921486	35921526	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 1; exon_id "ENSMUSE00001324680.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	UTR	35920107	35920120	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 2; exon_id "ENSMUSE00001320590.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	HAVANA	UTR	35895328	35895527	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000188585.6"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-202"; exon_number 10; exon_id "ENSMUSE00001333170.1"; level 2; protein_id "ENSMUSP00000139596.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048839.1"; havana_transcript "OTTMUST00000124933.1";
mm10-chrY	ENSEMBL	transcript	35898093	35920097	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	exon	35919989	35920097	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 1; exon_id "ENSMUSE00001014718.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	CDS	35919989	35920097	.	-	0	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 1; exon_id "ENSMUSE00001014718.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	start_codon	35920095	35920097	.	-	0	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 1; exon_id "ENSMUSE00001014718.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	exon	35914584	35914650	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 2; exon_id "ENSMUSE00000973168.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	CDS	35914584	35914650	.	-	2	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 2; exon_id "ENSMUSE00000973168.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	exon	35913918	35913952	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 3; exon_id "ENSMUSE00001003954.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	CDS	35913918	35913952	.	-	1	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 3; exon_id "ENSMUSE00001003954.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	exon	35906832	35906898	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 4; exon_id "ENSMUSE00001050482.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	CDS	35906832	35906898	.	-	2	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 4; exon_id "ENSMUSE00001050482.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	exon	35906222	35906256	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 5; exon_id "ENSMUSE00001072882.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	CDS	35906222	35906256	.	-	1	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 5; exon_id "ENSMUSE00001072882.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	exon	35898923	35899040	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 6; exon_id "ENSMUSE00000989218.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	CDS	35898923	35899040	.	-	2	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 6; exon_id "ENSMUSE00000989218.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	exon	35898093	35898159	.	-	.	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 7; exon_id "ENSMUSE00000976219.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	ENSEMBL	CDS	35898093	35898159	.	-	1	gene_id "ENSMUSG00000096650.7"; transcript_id "ENSMUST00000180332.1"; gene_type "protein_coding"; gene_name "Gm20896"; transcript_type "protein_coding"; transcript_name "Gm20896-201"; exon_number 7; exon_id "ENSMUSE00000976219.1"; level 3; protein_id "ENSMUSP00000137594.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048839.1";
mm10-chrY	HAVANA	gene	35980962	35984200	.	-	.	gene_id "ENSMUSG00000102058.6"; gene_type "lincRNA"; gene_name "Gm28470"; level 2; havana_gene "OTTMUSG00000048840.1";
mm10-chrY	HAVANA	transcript	35980962	35984200	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000186912.6"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124934.1";
mm10-chrY	HAVANA	exon	35983561	35984200	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000186912.6"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-201"; exon_number 1; exon_id "ENSMUSE00001318320.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124934.1";
mm10-chrY	HAVANA	exon	35982890	35983075	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000186912.6"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-201"; exon_number 2; exon_id "ENSMUSE00001334004.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124934.1";
mm10-chrY	HAVANA	exon	35981978	35982160	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000186912.6"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-201"; exon_number 3; exon_id "ENSMUSE00001329765.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124934.1";
mm10-chrY	HAVANA	exon	35980962	35981450	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000186912.6"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-201"; exon_number 4; exon_id "ENSMUSE00001335991.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124934.1";
mm10-chrY	HAVANA	transcript	35981382	35983747	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000190482.6"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124935.1";
mm10-chrY	HAVANA	exon	35983561	35983747	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000190482.6"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-203"; exon_number 1; exon_id "ENSMUSE00001326538.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124935.1";
mm10-chrY	HAVANA	exon	35982890	35983071	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000190482.6"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-203"; exon_number 2; exon_id "ENSMUSE00001332163.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124935.1";
mm10-chrY	HAVANA	exon	35981382	35981450	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000190482.6"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-203"; exon_number 3; exon_id "ENSMUSE00001334493.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124935.1";
mm10-chrY	HAVANA	transcript	35981382	35983747	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000190138.1"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124936.1";
mm10-chrY	HAVANA	exon	35983561	35983747	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000190138.1"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-202"; exon_number 1; exon_id "ENSMUSE00001326538.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124936.1";
mm10-chrY	HAVANA	exon	35982890	35983071	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000190138.1"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-202"; exon_number 2; exon_id "ENSMUSE00001332163.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124936.1";
mm10-chrY	HAVANA	exon	35981978	35982160	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000190138.1"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-202"; exon_number 3; exon_id "ENSMUSE00001329765.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124936.1";
mm10-chrY	HAVANA	exon	35981382	35981450	.	-	.	gene_id "ENSMUSG00000102058.6"; transcript_id "ENSMUST00000190138.1"; gene_type "lincRNA"; gene_name "Gm28470"; transcript_type "lincRNA"; transcript_name "Gm28470-202"; exon_number 4; exon_id "ENSMUSE00001334493.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048840.1"; havana_transcript "OTTMUST00000124936.1";
mm10-chrY	HAVANA	gene	36015725	36019070	.	+	.	gene_id "ENSMUSG00000100034.1"; gene_type "lincRNA"; gene_name "Gm28469"; level 2; havana_gene "OTTMUSG00000048841.1";
mm10-chrY	HAVANA	transcript	36015725	36019070	.	+	.	gene_id "ENSMUSG00000100034.1"; transcript_id "ENSMUST00000186374.1"; gene_type "lincRNA"; gene_name "Gm28469"; transcript_type "lincRNA"; transcript_name "Gm28469-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048841.1"; havana_transcript "OTTMUST00000124937.1";
mm10-chrY	HAVANA	exon	36015725	36015947	.	+	.	gene_id "ENSMUSG00000100034.1"; transcript_id "ENSMUST00000186374.1"; gene_type "lincRNA"; gene_name "Gm28469"; transcript_type "lincRNA"; transcript_name "Gm28469-201"; exon_number 1; exon_id "ENSMUSE00001325163.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048841.1"; havana_transcript "OTTMUST00000124937.1";
mm10-chrY	HAVANA	exon	36017128	36019070	.	+	.	gene_id "ENSMUSG00000100034.1"; transcript_id "ENSMUST00000186374.1"; gene_type "lincRNA"; gene_name "Gm28469"; transcript_type "lincRNA"; transcript_name "Gm28469-201"; exon_number 2; exon_id "ENSMUSE00001332563.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048841.1"; havana_transcript "OTTMUST00000124937.1";
mm10-chrY	HAVANA	gene	36025182	36025877	.	+	.	gene_id "ENSMUSG00000099589.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21898"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048842.1";
mm10-chrY	HAVANA	transcript	36025182	36025877	.	+	.	gene_id "ENSMUSG00000099589.1"; transcript_id "ENSMUST00000190727.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21898"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21898-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048842.1"; havana_transcript "OTTMUST00000124938.1";
mm10-chrY	HAVANA	exon	36025182	36025877	.	+	.	gene_id "ENSMUSG00000099589.1"; transcript_id "ENSMUST00000190727.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21898"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21898-201"; exon_number 1; exon_id "ENSMUSE00001329530.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048842.1"; havana_transcript "OTTMUST00000124938.1";
mm10-chrY	HAVANA	gene	36062048	36062662	.	+	.	gene_id "ENSMUSG00000100263.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28468"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048843.1";
mm10-chrY	HAVANA	transcript	36062048	36062662	.	+	.	gene_id "ENSMUSG00000100263.1"; transcript_id "ENSMUST00000188536.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28468"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28468-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048843.1"; havana_transcript "OTTMUST00000124939.1";
mm10-chrY	HAVANA	exon	36062048	36062662	.	+	.	gene_id "ENSMUSG00000100263.1"; transcript_id "ENSMUST00000188536.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28468"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28468-201"; exon_number 1; exon_id "ENSMUSE00001332098.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048843.1"; havana_transcript "OTTMUST00000124939.1";
mm10-chrY	HAVANA	gene	36091591	36092283	.	+	.	gene_id "ENSMUSG00000101575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20898"; level 2; havana_gene "OTTMUSG00000048844.1";
mm10-chrY	HAVANA	transcript	36091591	36092283	.	+	.	gene_id "ENSMUSG00000101575.1"; transcript_id "ENSMUST00000185598.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20898"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20898-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048844.1"; havana_transcript "OTTMUST00000124940.1";
mm10-chrY	HAVANA	exon	36091591	36092283	.	+	.	gene_id "ENSMUSG00000101575.1"; transcript_id "ENSMUST00000185598.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20898"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20898-201"; exon_number 1; exon_id "ENSMUSE00001324275.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048844.1"; havana_transcript "OTTMUST00000124940.1";
mm10-chrY	HAVANA	gene	36165503	36166198	.	+	.	gene_id "ENSMUSG00000100785.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29333"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048889.1";
mm10-chrY	HAVANA	transcript	36165503	36166198	.	+	.	gene_id "ENSMUSG00000100785.1"; transcript_id "ENSMUST00000189258.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29333"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29333-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048889.1"; havana_transcript "OTTMUST00000124991.1";
mm10-chrY	HAVANA	exon	36165503	36166198	.	+	.	gene_id "ENSMUSG00000100785.1"; transcript_id "ENSMUST00000189258.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29333"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29333-201"; exon_number 1; exon_id "ENSMUSE00001327504.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048889.1"; havana_transcript "OTTMUST00000124991.1";
mm10-chrY	HAVANA	gene	36273163	36276400	.	-	.	gene_id "ENSMUSG00000099822.6"; gene_type "lincRNA"; gene_name "Gm28332"; level 2; havana_gene "OTTMUSG00000048890.1";
mm10-chrY	HAVANA	transcript	36273163	36276400	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000191389.6"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-203"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124992.1";
mm10-chrY	HAVANA	exon	36275762	36276400	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000191389.6"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-203"; exon_number 1; exon_id "ENSMUSE00001326046.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124992.1";
mm10-chrY	HAVANA	exon	36275091	36275276	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000191389.6"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-203"; exon_number 2; exon_id "ENSMUSE00001335131.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124992.1";
mm10-chrY	HAVANA	exon	36274178	36274361	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000191389.6"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-203"; exon_number 3; exon_id "ENSMUSE00001332060.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124992.1";
mm10-chrY	HAVANA	exon	36273163	36273651	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000191389.6"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-203"; exon_number 4; exon_id "ENSMUSE00001327604.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124992.1";
mm10-chrY	HAVANA	transcript	36273583	36275947	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000185485.5"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124993.1";
mm10-chrY	HAVANA	exon	36275762	36275947	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000185485.5"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-201"; exon_number 1; exon_id "ENSMUSE00001330417.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124993.1";
mm10-chrY	HAVANA	exon	36275091	36275272	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000185485.5"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-201"; exon_number 2; exon_id "ENSMUSE00001325409.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124993.1";
mm10-chrY	HAVANA	exon	36273583	36273651	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000185485.5"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-201"; exon_number 3; exon_id "ENSMUSE00001333779.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124993.1";
mm10-chrY	HAVANA	transcript	36273583	36275947	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000189521.2"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124994.1";
mm10-chrY	HAVANA	exon	36275762	36275947	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000189521.2"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-202"; exon_number 1; exon_id "ENSMUSE00001330417.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124994.1";
mm10-chrY	HAVANA	exon	36275091	36275272	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000189521.2"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-202"; exon_number 2; exon_id "ENSMUSE00001325409.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124994.1";
mm10-chrY	HAVANA	exon	36274178	36274361	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000189521.2"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-202"; exon_number 3; exon_id "ENSMUSE00001332060.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124994.1";
mm10-chrY	HAVANA	exon	36273583	36273651	.	-	.	gene_id "ENSMUSG00000099822.6"; transcript_id "ENSMUST00000189521.2"; gene_type "lincRNA"; gene_name "Gm28332"; transcript_type "lincRNA"; transcript_name "Gm28332-202"; exon_number 4; exon_id "ENSMUSE00001333779.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048890.1"; havana_transcript "OTTMUST00000124994.1";
mm10-chrY	HAVANA	gene	36308401	36311744	.	+	.	gene_id "ENSMUSG00000101781.1"; gene_type "lincRNA"; gene_name "Gm28333"; level 2; havana_gene "OTTMUSG00000048891.1";
mm10-chrY	HAVANA	transcript	36308401	36311744	.	+	.	gene_id "ENSMUSG00000101781.1"; transcript_id "ENSMUST00000186034.1"; gene_type "lincRNA"; gene_name "Gm28333"; transcript_type "lincRNA"; transcript_name "Gm28333-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048891.1"; havana_transcript "OTTMUST00000124995.1";
mm10-chrY	HAVANA	exon	36308401	36308623	.	+	.	gene_id "ENSMUSG00000101781.1"; transcript_id "ENSMUST00000186034.1"; gene_type "lincRNA"; gene_name "Gm28333"; transcript_type "lincRNA"; transcript_name "Gm28333-201"; exon_number 1; exon_id "ENSMUSE00001324608.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048891.1"; havana_transcript "OTTMUST00000124995.1";
mm10-chrY	HAVANA	exon	36309800	36311744	.	+	.	gene_id "ENSMUSG00000101781.1"; transcript_id "ENSMUST00000186034.1"; gene_type "lincRNA"; gene_name "Gm28333"; transcript_type "lincRNA"; transcript_name "Gm28333-201"; exon_number 2; exon_id "ENSMUSE00001329836.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048891.1"; havana_transcript "OTTMUST00000124995.1";
mm10-chrY	HAVANA	gene	36313154	36313468	.	+	.	gene_id "ENSMUSG00000101271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28334"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048892.1";
mm10-chrY	HAVANA	transcript	36313154	36313468	.	+	.	gene_id "ENSMUSG00000101271.1"; transcript_id "ENSMUST00000186653.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28334"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28334-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048892.1"; havana_transcript "OTTMUST00000124996.1";
mm10-chrY	HAVANA	exon	36313154	36313468	.	+	.	gene_id "ENSMUSG00000101271.1"; transcript_id "ENSMUST00000186653.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28334"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28334-201"; exon_number 1; exon_id "ENSMUSE00001318292.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048892.1"; havana_transcript "OTTMUST00000124996.1";
mm10-chrY	HAVANA	gene	36349735	36350430	.	+	.	gene_id "ENSMUSG00000099504.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28335"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048893.1";
mm10-chrY	HAVANA	transcript	36349735	36350430	.	+	.	gene_id "ENSMUSG00000099504.1"; transcript_id "ENSMUST00000186204.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28335"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28335-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048893.1"; havana_transcript "OTTMUST00000124997.1";
mm10-chrY	HAVANA	exon	36349735	36350430	.	+	.	gene_id "ENSMUSG00000099504.1"; transcript_id "ENSMUST00000186204.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28335"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28335-201"; exon_number 1; exon_id "ENSMUSE00001330346.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048893.1"; havana_transcript "OTTMUST00000124997.1";
mm10-chrY	HAVANA	gene	36391137	36391583	.	-	.	gene_id "ENSMUSG00000101377.1"; gene_type "lincRNA"; gene_name "Gm28336"; level 2; havana_gene "OTTMUSG00000048894.1";
mm10-chrY	HAVANA	transcript	36391137	36391583	.	-	.	gene_id "ENSMUSG00000101377.1"; transcript_id "ENSMUST00000190743.1"; gene_type "lincRNA"; gene_name "Gm28336"; transcript_type "lincRNA"; transcript_name "Gm28336-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048894.1"; havana_transcript "OTTMUST00000124998.1";
mm10-chrY	HAVANA	exon	36391479	36391583	.	-	.	gene_id "ENSMUSG00000101377.1"; transcript_id "ENSMUST00000190743.1"; gene_type "lincRNA"; gene_name "Gm28336"; transcript_type "lincRNA"; transcript_name "Gm28336-201"; exon_number 1; exon_id "ENSMUSE00001323980.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048894.1"; havana_transcript "OTTMUST00000124998.1";
mm10-chrY	HAVANA	exon	36391137	36391197	.	-	.	gene_id "ENSMUSG00000101377.1"; transcript_id "ENSMUST00000190743.1"; gene_type "lincRNA"; gene_name "Gm28336"; transcript_type "lincRNA"; transcript_name "Gm28336-201"; exon_number 2; exon_id "ENSMUSE00001329843.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048894.1"; havana_transcript "OTTMUST00000124998.1";
mm10-chrY	HAVANA	gene	36410763	36435435	.	-	.	gene_id "ENSMUSG00000101709.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28337"; level 2; havana_gene "OTTMUSG00000048895.1";
mm10-chrY	HAVANA	transcript	36410763	36435435	.	-	.	gene_id "ENSMUSG00000101709.1"; transcript_id "ENSMUST00000190425.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28337"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28337-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048895.1"; havana_transcript "OTTMUST00000124999.1";
mm10-chrY	HAVANA	exon	36435318	36435435	.	-	.	gene_id "ENSMUSG00000101709.1"; transcript_id "ENSMUST00000190425.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28337"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28337-201"; exon_number 1; exon_id "ENSMUSE00001331361.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048895.1"; havana_transcript "OTTMUST00000124999.1";
mm10-chrY	HAVANA	exon	36429916	36429982	.	-	.	gene_id "ENSMUSG00000101709.1"; transcript_id "ENSMUST00000190425.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28337"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28337-201"; exon_number 2; exon_id "ENSMUSE00001335800.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048895.1"; havana_transcript "OTTMUST00000124999.1";
mm10-chrY	HAVANA	exon	36429256	36429290	.	-	.	gene_id "ENSMUSG00000101709.1"; transcript_id "ENSMUST00000190425.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28337"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28337-201"; exon_number 3; exon_id "ENSMUSE00001326227.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048895.1"; havana_transcript "OTTMUST00000124999.1";
mm10-chrY	HAVANA	exon	36422179	36422245	.	-	.	gene_id "ENSMUSG00000101709.1"; transcript_id "ENSMUST00000190425.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28337"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28337-201"; exon_number 4; exon_id "ENSMUSE00001319328.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048895.1"; havana_transcript "OTTMUST00000124999.1";
mm10-chrY	HAVANA	exon	36421567	36421601	.	-	.	gene_id "ENSMUSG00000101709.1"; transcript_id "ENSMUST00000190425.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28337"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28337-201"; exon_number 5; exon_id "ENSMUSE00001334882.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048895.1"; havana_transcript "OTTMUST00000124999.1";
mm10-chrY	HAVANA	exon	36414279	36414396	.	-	.	gene_id "ENSMUSG00000101709.1"; transcript_id "ENSMUST00000190425.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28337"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28337-201"; exon_number 6; exon_id "ENSMUSE00001325725.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048895.1"; havana_transcript "OTTMUST00000124999.1";
mm10-chrY	HAVANA	exon	36413285	36413384	.	-	.	gene_id "ENSMUSG00000101709.1"; transcript_id "ENSMUST00000190425.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28337"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28337-201"; exon_number 7; exon_id "ENSMUSE00001335640.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048895.1"; havana_transcript "OTTMUST00000124999.1";
mm10-chrY	HAVANA	exon	36411149	36411247	.	-	.	gene_id "ENSMUSG00000101709.1"; transcript_id "ENSMUST00000190425.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28337"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28337-201"; exon_number 8; exon_id "ENSMUSE00001327967.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048895.1"; havana_transcript "OTTMUST00000124999.1";
mm10-chrY	HAVANA	exon	36410763	36410789	.	-	.	gene_id "ENSMUSG00000101709.1"; transcript_id "ENSMUST00000190425.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28337"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28337-201"; exon_number 9; exon_id "ENSMUSE00001321573.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048895.1"; havana_transcript "OTTMUST00000124999.1";
mm10-chrY	HAVANA	gene	36495711	36498950	.	-	.	gene_id "ENSMUSG00000099814.6"; gene_type "lincRNA"; gene_name "Gm28338"; level 2; havana_gene "OTTMUSG00000048896.1";
mm10-chrY	HAVANA	transcript	36495711	36498950	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000186269.6"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125000.1";
mm10-chrY	HAVANA	exon	36498311	36498950	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000186269.6"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-202"; exon_number 1; exon_id "ENSMUSE00001329577.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125000.1";
mm10-chrY	HAVANA	exon	36497640	36497825	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000186269.6"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-202"; exon_number 2; exon_id "ENSMUSE00001321391.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125000.1";
mm10-chrY	HAVANA	exon	36496727	36496910	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000186269.6"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-202"; exon_number 3; exon_id "ENSMUSE00001327525.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125000.1";
mm10-chrY	HAVANA	exon	36495711	36496199	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000186269.6"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-202"; exon_number 4; exon_id "ENSMUSE00001328356.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125000.1";
mm10-chrY	HAVANA	transcript	36496135	36498497	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000188790.6"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125001.1";
mm10-chrY	HAVANA	exon	36498311	36498497	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000188790.6"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-203"; exon_number 1; exon_id "ENSMUSE00001319994.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125001.1";
mm10-chrY	HAVANA	exon	36497640	36497821	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000188790.6"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-203"; exon_number 2; exon_id "ENSMUSE00001318657.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125001.1";
mm10-chrY	HAVANA	exon	36496135	36496199	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000188790.6"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-203"; exon_number 3; exon_id "ENSMUSE00001324876.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125001.1";
mm10-chrY	HAVANA	transcript	36496135	36498497	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000186161.1"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125002.1";
mm10-chrY	HAVANA	exon	36498311	36498497	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000186161.1"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-201"; exon_number 1; exon_id "ENSMUSE00001319994.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125002.1";
mm10-chrY	HAVANA	exon	36497640	36497821	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000186161.1"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-201"; exon_number 2; exon_id "ENSMUSE00001318657.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125002.1";
mm10-chrY	HAVANA	exon	36496727	36496910	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000186161.1"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-201"; exon_number 3; exon_id "ENSMUSE00001327525.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125002.1";
mm10-chrY	HAVANA	exon	36496135	36496199	.	-	.	gene_id "ENSMUSG00000099814.6"; transcript_id "ENSMUST00000186161.1"; gene_type "lincRNA"; gene_name "Gm28338"; transcript_type "lincRNA"; transcript_name "Gm28338-201"; exon_number 4; exon_id "ENSMUSE00001324876.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048896.1"; havana_transcript "OTTMUST00000125002.1";
mm10-chrY	HAVANA	gene	36648203	36648898	.	+	.	gene_id "ENSMUSG00000100316.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28812"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048736.1";
mm10-chrY	HAVANA	transcript	36648203	36648898	.	+	.	gene_id "ENSMUSG00000100316.1"; transcript_id "ENSMUST00000185963.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28812"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28812-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048736.1"; havana_transcript "OTTMUST00000124743.1";
mm10-chrY	HAVANA	exon	36648203	36648898	.	+	.	gene_id "ENSMUSG00000100316.1"; transcript_id "ENSMUST00000185963.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28812"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28812-201"; exon_number 1; exon_id "ENSMUSE00001323990.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048736.1"; havana_transcript "OTTMUST00000124743.1";
mm10-chrY	HAVANA	gene	36676980	36678002	.	+	.	gene_id "ENSMUSG00000101284.1"; gene_type "lincRNA"; gene_name "Gm28811"; level 2; havana_gene "OTTMUSG00000048737.1";
mm10-chrY	HAVANA	transcript	36676980	36678002	.	+	.	gene_id "ENSMUSG00000101284.1"; transcript_id "ENSMUST00000190650.1"; gene_type "lincRNA"; gene_name "Gm28811"; transcript_type "lincRNA"; transcript_name "Gm28811-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048737.1"; havana_transcript "OTTMUST00000124744.1";
mm10-chrY	HAVANA	exon	36676980	36677250	.	+	.	gene_id "ENSMUSG00000101284.1"; transcript_id "ENSMUST00000190650.1"; gene_type "lincRNA"; gene_name "Gm28811"; transcript_type "lincRNA"; transcript_name "Gm28811-201"; exon_number 1; exon_id "ENSMUSE00001328894.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048737.1"; havana_transcript "OTTMUST00000124744.1";
mm10-chrY	HAVANA	exon	36677832	36678002	.	+	.	gene_id "ENSMUSG00000101284.1"; transcript_id "ENSMUST00000190650.1"; gene_type "lincRNA"; gene_name "Gm28811"; transcript_type "lincRNA"; transcript_name "Gm28811-201"; exon_number 2; exon_id "ENSMUSE00001328583.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048737.1"; havana_transcript "OTTMUST00000124744.1";
mm10-chrY	HAVANA	gene	36689719	36690165	.	-	.	gene_id "ENSMUSG00000100651.1"; gene_type "lincRNA"; gene_name "Gm28810"; level 2; havana_gene "OTTMUSG00000048738.1";
mm10-chrY	HAVANA	transcript	36689719	36690165	.	-	.	gene_id "ENSMUSG00000100651.1"; transcript_id "ENSMUST00000188173.1"; gene_type "lincRNA"; gene_name "Gm28810"; transcript_type "lincRNA"; transcript_name "Gm28810-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048738.1"; havana_transcript "OTTMUST00000124745.1";
mm10-chrY	HAVANA	exon	36690061	36690165	.	-	.	gene_id "ENSMUSG00000100651.1"; transcript_id "ENSMUST00000188173.1"; gene_type "lincRNA"; gene_name "Gm28810"; transcript_type "lincRNA"; transcript_name "Gm28810-201"; exon_number 1; exon_id "ENSMUSE00001318686.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048738.1"; havana_transcript "OTTMUST00000124745.1";
mm10-chrY	HAVANA	exon	36689719	36689779	.	-	.	gene_id "ENSMUSG00000100651.1"; transcript_id "ENSMUST00000188173.1"; gene_type "lincRNA"; gene_name "Gm28810"; transcript_type "lincRNA"; transcript_name "Gm28810-201"; exon_number 2; exon_id "ENSMUSE00001320196.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048738.1"; havana_transcript "OTTMUST00000124745.1";
mm10-chrY	HAVANA	gene	36709098	36735290	.	-	.	gene_id "ENSMUSG00000101933.1"; gene_type "protein_coding"; gene_name "Gm20835"; level 2; havana_gene "OTTMUSG00000048739.1";
mm10-chrY	HAVANA	transcript	36709098	36735290	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	exon	36735247	36735290	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 1; exon_id "ENSMUSE00001318552.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	exon	36733751	36733882	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 2; exon_id "ENSMUSE00001329979.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	CDS	36733751	36733868	.	-	0	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 2; exon_id "ENSMUSE00001329979.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	start_codon	36733866	36733868	.	-	0	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 2; exon_id "ENSMUSE00001329979.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	exon	36728355	36728421	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 3; exon_id "ENSMUSE00001319366.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	CDS	36728355	36728421	.	-	2	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 3; exon_id "ENSMUSE00001319366.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	exon	36727697	36727731	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 4; exon_id "ENSMUSE00001319950.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	CDS	36727697	36727731	.	-	1	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 4; exon_id "ENSMUSE00001319950.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	exon	36720602	36720668	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 5; exon_id "ENSMUSE00001319319.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	CDS	36720602	36720668	.	-	2	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 5; exon_id "ENSMUSE00001319319.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	exon	36719992	36720026	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 6; exon_id "ENSMUSE00001330208.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	CDS	36719992	36720026	.	-	1	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 6; exon_id "ENSMUSE00001330208.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	exon	36712713	36712830	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 7; exon_id "ENSMUSE00001334618.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	CDS	36712713	36712830	.	-	2	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 7; exon_id "ENSMUSE00001334618.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	exon	36711830	36711929	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 8; exon_id "ENSMUSE00001335971.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	CDS	36711830	36711929	.	-	1	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 8; exon_id "ENSMUSE00001335971.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	exon	36709683	36709781	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 9; exon_id "ENSMUSE00001323810.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	CDS	36709683	36709781	.	-	0	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 9; exon_id "ENSMUSE00001323810.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	exon	36709098	36709323	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 10; exon_id "ENSMUSE00001327632.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	CDS	36709297	36709323	.	-	0	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 10; exon_id "ENSMUSE00001327632.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	stop_codon	36709294	36709296	.	-	0	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 10; exon_id "ENSMUSE00001327632.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	UTR	36735247	36735290	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 1; exon_id "ENSMUSE00001318552.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	UTR	36733869	36733882	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 2; exon_id "ENSMUSE00001329979.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	UTR	36709098	36709296	.	-	.	gene_id "ENSMUSG00000101933.1"; transcript_id "ENSMUST00000185565.1"; gene_type "protein_coding"; gene_name "Gm20835"; transcript_type "protein_coding"; transcript_name "Gm20835-201"; exon_number 10; exon_id "ENSMUSE00001327632.1"; level 2; protein_id "ENSMUSP00000140944.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048739.1"; havana_transcript "OTTMUST00000124746.1";
mm10-chrY	HAVANA	gene	36794110	36797345	.	-	.	gene_id "ENSMUSG00000100647.6"; gene_type "lincRNA"; gene_name "Gm29027"; level 2; havana_gene "OTTMUSG00000048740.1";
mm10-chrY	HAVANA	transcript	36794110	36797345	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000187571.6"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124747.1";
mm10-chrY	HAVANA	exon	36796710	36797345	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000187571.6"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-202"; exon_number 1; exon_id "ENSMUSE00001320505.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124747.1";
mm10-chrY	HAVANA	exon	36796039	36796224	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000187571.6"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-202"; exon_number 2; exon_id "ENSMUSE00001330763.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124747.1";
mm10-chrY	HAVANA	exon	36795126	36795309	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000187571.6"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-202"; exon_number 3; exon_id "ENSMUSE00001334543.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124747.1";
mm10-chrY	HAVANA	exon	36794110	36794598	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000187571.6"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-202"; exon_number 4; exon_id "ENSMUSE00001330511.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124747.1";
mm10-chrY	HAVANA	transcript	36794530	36796893	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000190559.6"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124748.1";
mm10-chrY	HAVANA	exon	36796710	36796893	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000190559.6"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-203"; exon_number 1; exon_id "ENSMUSE00001334598.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124748.1";
mm10-chrY	HAVANA	exon	36796039	36796220	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000190559.6"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-203"; exon_number 2; exon_id "ENSMUSE00001335661.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124748.1";
mm10-chrY	HAVANA	exon	36795126	36795309	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000190559.6"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-203"; exon_number 3; exon_id "ENSMUSE00001334543.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124748.1";
mm10-chrY	HAVANA	exon	36794530	36794598	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000190559.6"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-203"; exon_number 4; exon_id "ENSMUSE00001328096.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124748.1";
mm10-chrY	HAVANA	transcript	36794530	36796893	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000185319.1"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124749.1";
mm10-chrY	HAVANA	exon	36796710	36796893	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000185319.1"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-201"; exon_number 1; exon_id "ENSMUSE00001334598.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124749.1";
mm10-chrY	HAVANA	exon	36796039	36796220	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000185319.1"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-201"; exon_number 2; exon_id "ENSMUSE00001335661.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124749.1";
mm10-chrY	HAVANA	exon	36794530	36794598	.	-	.	gene_id "ENSMUSG00000100647.6"; transcript_id "ENSMUST00000185319.1"; gene_type "lincRNA"; gene_name "Gm29027"; transcript_type "lincRNA"; transcript_name "Gm29027-201"; exon_number 3; exon_id "ENSMUSE00001328096.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048740.1"; havana_transcript "OTTMUST00000124749.1";
mm10-chrY	HAVANA	gene	36830541	36833887	.	+	.	gene_id "ENSMUSG00000101815.1"; gene_type "lincRNA"; gene_name "Gm29028"; level 2; havana_gene "OTTMUSG00000048741.1";
mm10-chrY	HAVANA	transcript	36830541	36833887	.	+	.	gene_id "ENSMUSG00000101815.1"; transcript_id "ENSMUST00000186297.1"; gene_type "lincRNA"; gene_name "Gm29028"; transcript_type "lincRNA"; transcript_name "Gm29028-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048741.1"; havana_transcript "OTTMUST00000124750.1";
mm10-chrY	HAVANA	exon	36830541	36830763	.	+	.	gene_id "ENSMUSG00000101815.1"; transcript_id "ENSMUST00000186297.1"; gene_type "lincRNA"; gene_name "Gm29028"; transcript_type "lincRNA"; transcript_name "Gm29028-201"; exon_number 1; exon_id "ENSMUSE00001327168.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048741.1"; havana_transcript "OTTMUST00000124750.1";
mm10-chrY	HAVANA	exon	36831945	36833887	.	+	.	gene_id "ENSMUSG00000101815.1"; transcript_id "ENSMUST00000186297.1"; gene_type "lincRNA"; gene_name "Gm29028"; transcript_type "lincRNA"; transcript_name "Gm29028-201"; exon_number 2; exon_id "ENSMUSE00001324006.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048741.1"; havana_transcript "OTTMUST00000124750.1";
mm10-chrY	HAVANA	gene	36839776	36840471	.	+	.	gene_id "ENSMUSG00000101538.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29029"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048742.1";
mm10-chrY	HAVANA	transcript	36839776	36840471	.	+	.	gene_id "ENSMUSG00000101538.1"; transcript_id "ENSMUST00000190520.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29029"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29029-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048742.1"; havana_transcript "OTTMUST00000124751.1";
mm10-chrY	HAVANA	exon	36839776	36840471	.	+	.	gene_id "ENSMUSG00000101538.1"; transcript_id "ENSMUST00000190520.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29029"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29029-201"; exon_number 1; exon_id "ENSMUSE00001331000.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048742.1"; havana_transcript "OTTMUST00000124751.1";
mm10-chrY	HAVANA	gene	36875792	36876406	.	+	.	gene_id "ENSMUSG00000100983.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29030"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048743.1";
mm10-chrY	HAVANA	transcript	36875792	36876406	.	+	.	gene_id "ENSMUSG00000100983.1"; transcript_id "ENSMUST00000190848.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29030"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29030-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048743.1"; havana_transcript "OTTMUST00000124752.1";
mm10-chrY	HAVANA	exon	36875792	36876406	.	+	.	gene_id "ENSMUSG00000100983.1"; transcript_id "ENSMUST00000190848.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29030"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29030-201"; exon_number 1; exon_id "ENSMUSE00001334318.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048743.1"; havana_transcript "OTTMUST00000124752.1";
mm10-chrY	HAVANA	gene	36884897	36888946	.	-	.	gene_id "ENSMUSG00000101820.1"; gene_type "lincRNA"; gene_name "Gm29023"; level 2; havana_gene "OTTMUSG00000048744.1";
mm10-chrY	HAVANA	transcript	36884897	36888946	.	-	.	gene_id "ENSMUSG00000101820.1"; transcript_id "ENSMUST00000190543.1"; gene_type "lincRNA"; gene_name "Gm29023"; transcript_type "lincRNA"; transcript_name "Gm29023-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048744.1"; havana_transcript "OTTMUST00000124753.1";
mm10-chrY	HAVANA	exon	36888839	36888946	.	-	.	gene_id "ENSMUSG00000101820.1"; transcript_id "ENSMUST00000190543.1"; gene_type "lincRNA"; gene_name "Gm29023"; transcript_type "lincRNA"; transcript_name "Gm29023-201"; exon_number 1; exon_id "ENSMUSE00001324165.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048744.1"; havana_transcript "OTTMUST00000124753.1";
mm10-chrY	HAVANA	exon	36887522	36887653	.	-	.	gene_id "ENSMUSG00000101820.1"; transcript_id "ENSMUST00000190543.1"; gene_type "lincRNA"; gene_name "Gm29023"; transcript_type "lincRNA"; transcript_name "Gm29023-201"; exon_number 2; exon_id "ENSMUSE00001327313.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048744.1"; havana_transcript "OTTMUST00000124753.1";
mm10-chrY	HAVANA	exon	36884897	36884981	.	-	.	gene_id "ENSMUSG00000101820.1"; transcript_id "ENSMUST00000190543.1"; gene_type "lincRNA"; gene_name "Gm29023"; transcript_type "lincRNA"; transcript_name "Gm29023-201"; exon_number 3; exon_id "ENSMUSE00001335709.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048744.1"; havana_transcript "OTTMUST00000124753.1";
mm10-chrY	HAVANA	gene	36905314	36906009	.	+	.	gene_id "ENSMUSG00000100283.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29024"; level 2; havana_gene "OTTMUSG00000048745.1";
mm10-chrY	HAVANA	transcript	36905314	36906009	.	+	.	gene_id "ENSMUSG00000100283.1"; transcript_id "ENSMUST00000189624.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29024"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29024-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048745.1"; havana_transcript "OTTMUST00000124754.1";
mm10-chrY	HAVANA	exon	36905314	36906009	.	+	.	gene_id "ENSMUSG00000100283.1"; transcript_id "ENSMUST00000189624.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29024"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29024-201"; exon_number 1; exon_id "ENSMUSE00001334916.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048745.1"; havana_transcript "OTTMUST00000124754.1";
mm10-chrY	HAVANA	gene	36935944	36939282	.	+	.	gene_id "ENSMUSG00000099832.1"; gene_type "lincRNA"; gene_name "Gm29025"; level 2; havana_gene "OTTMUSG00000048746.1";
mm10-chrY	HAVANA	transcript	36935944	36939282	.	+	.	gene_id "ENSMUSG00000099832.1"; transcript_id "ENSMUST00000186756.1"; gene_type "lincRNA"; gene_name "Gm29025"; transcript_type "lincRNA"; transcript_name "Gm29025-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048746.1"; havana_transcript "OTTMUST00000124755.1";
mm10-chrY	HAVANA	exon	36935944	36936166	.	+	.	gene_id "ENSMUSG00000099832.1"; transcript_id "ENSMUST00000186756.1"; gene_type "lincRNA"; gene_name "Gm29025"; transcript_type "lincRNA"; transcript_name "Gm29025-201"; exon_number 1; exon_id "ENSMUSE00001328804.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048746.1"; havana_transcript "OTTMUST00000124755.1";
mm10-chrY	HAVANA	exon	36937343	36939282	.	+	.	gene_id "ENSMUSG00000099832.1"; transcript_id "ENSMUST00000186756.1"; gene_type "lincRNA"; gene_name "Gm29025"; transcript_type "lincRNA"; transcript_name "Gm29025-201"; exon_number 2; exon_id "ENSMUSE00001329702.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048746.1"; havana_transcript "OTTMUST00000124755.1";
mm10-chrY	HAVANA	gene	36940688	36941002	.	+	.	gene_id "ENSMUSG00000101246.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29026"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048747.1";
mm10-chrY	HAVANA	transcript	36940688	36941002	.	+	.	gene_id "ENSMUSG00000101246.1"; transcript_id "ENSMUST00000187787.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29026"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29026-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048747.1"; havana_transcript "OTTMUST00000124756.1";
mm10-chrY	HAVANA	exon	36940688	36941002	.	+	.	gene_id "ENSMUSG00000101246.1"; transcript_id "ENSMUST00000187787.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29026"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29026-201"; exon_number 1; exon_id "ENSMUSE00001331019.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048747.1"; havana_transcript "OTTMUST00000124756.1";
mm10-chrY	HAVANA	gene	37071087	37071701	.	+	.	gene_id "ENSMUSG00000101382.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28213"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047548.1";
mm10-chrY	HAVANA	transcript	37071087	37071701	.	+	.	gene_id "ENSMUSG00000101382.1"; transcript_id "ENSMUST00000189183.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28213"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28213-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047548.1"; havana_transcript "OTTMUST00000122656.1";
mm10-chrY	HAVANA	exon	37071087	37071701	.	+	.	gene_id "ENSMUSG00000101382.1"; transcript_id "ENSMUST00000189183.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28213"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28213-201"; exon_number 1; exon_id "ENSMUSE00001321819.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047548.1"; havana_transcript "OTTMUST00000122656.1";
mm10-chrY	HAVANA	gene	37082811	37084351	.	-	.	gene_id "ENSMUSG00000099967.1"; gene_type "lincRNA"; gene_name "Gm28212"; level 2; havana_gene "OTTMUSG00000047549.1";
mm10-chrY	HAVANA	transcript	37082811	37084351	.	-	.	gene_id "ENSMUSG00000099967.1"; transcript_id "ENSMUST00000187114.1"; gene_type "lincRNA"; gene_name "Gm28212"; transcript_type "lincRNA"; transcript_name "Gm28212-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047549.1"; havana_transcript "OTTMUST00000122657.1";
mm10-chrY	HAVANA	exon	37084134	37084351	.	-	.	gene_id "ENSMUSG00000099967.1"; transcript_id "ENSMUST00000187114.1"; gene_type "lincRNA"; gene_name "Gm28212"; transcript_type "lincRNA"; transcript_name "Gm28212-201"; exon_number 1; exon_id "ENSMUSE00001326627.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047549.1"; havana_transcript "OTTMUST00000122657.1";
mm10-chrY	HAVANA	exon	37082811	37082948	.	-	.	gene_id "ENSMUSG00000099967.1"; transcript_id "ENSMUST00000187114.1"; gene_type "lincRNA"; gene_name "Gm28212"; transcript_type "lincRNA"; transcript_name "Gm28212-201"; exon_number 2; exon_id "ENSMUSE00001321368.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047549.1"; havana_transcript "OTTMUST00000122657.1";
mm10-chrY	HAVANA	gene	37100609	37101304	.	+	.	gene_id "ENSMUSG00000101161.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21799"; level 2; havana_gene "OTTMUSG00000047550.1";
mm10-chrY	HAVANA	transcript	37100609	37101304	.	+	.	gene_id "ENSMUSG00000101161.1"; transcript_id "ENSMUST00000190662.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21799"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21799-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047550.1"; havana_transcript "OTTMUST00000122658.1";
mm10-chrY	HAVANA	exon	37100609	37101304	.	+	.	gene_id "ENSMUSG00000101161.1"; transcript_id "ENSMUST00000190662.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21799"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21799-201"; exon_number 1; exon_id "ENSMUSE00001323842.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047550.1"; havana_transcript "OTTMUST00000122658.1";
mm10-chrY	HAVANA	gene	37172530	37173225	.	+	.	gene_id "ENSMUSG00000100705.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28227"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047551.1";
mm10-chrY	HAVANA	transcript	37172530	37173225	.	+	.	gene_id "ENSMUSG00000100705.1"; transcript_id "ENSMUST00000186862.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28227"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28227-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047551.1"; havana_transcript "OTTMUST00000122659.1";
mm10-chrY	HAVANA	exon	37172530	37173225	.	+	.	gene_id "ENSMUSG00000100705.1"; transcript_id "ENSMUST00000186862.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28227"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28227-201"; exon_number 1; exon_id "ENSMUSE00001332239.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047551.1"; havana_transcript "OTTMUST00000122659.1";
mm10-chrY	HAVANA	gene	37233420	37259603	.	-	.	gene_id "ENSMUSG00000101157.1"; gene_type "protein_coding"; gene_name "Gm20905"; level 2; havana_gene "OTTMUSG00000047552.1";
mm10-chrY	HAVANA	transcript	37233420	37259603	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	exon	37259560	37259603	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 1; exon_id "ENSMUSE00001328159.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	exon	37258064	37258195	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 2; exon_id "ENSMUSE00001327116.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	CDS	37258064	37258181	.	-	0	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 2; exon_id "ENSMUSE00001327116.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	start_codon	37258179	37258181	.	-	0	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 2; exon_id "ENSMUSE00001327116.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	exon	37252668	37252734	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 3; exon_id "ENSMUSE00001321000.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	CDS	37252668	37252734	.	-	2	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 3; exon_id "ENSMUSE00001321000.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	exon	37252010	37252044	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 4; exon_id "ENSMUSE00001331757.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	CDS	37252010	37252044	.	-	1	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 4; exon_id "ENSMUSE00001331757.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	exon	37244920	37244986	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 5; exon_id "ENSMUSE00001327905.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	CDS	37244920	37244986	.	-	2	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 5; exon_id "ENSMUSE00001327905.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	exon	37244310	37244344	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 6; exon_id "ENSMUSE00001323446.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	CDS	37244310	37244344	.	-	1	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 6; exon_id "ENSMUSE00001323446.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	exon	37237033	37237150	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 7; exon_id "ENSMUSE00001326029.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	CDS	37237033	37237150	.	-	2	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 7; exon_id "ENSMUSE00001326029.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	exon	37236152	37236251	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 8; exon_id "ENSMUSE00001322298.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	CDS	37236152	37236251	.	-	1	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 8; exon_id "ENSMUSE00001322298.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	exon	37234005	37234103	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 9; exon_id "ENSMUSE00001321493.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	CDS	37234005	37234103	.	-	0	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 9; exon_id "ENSMUSE00001321493.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	exon	37233420	37233645	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 10; exon_id "ENSMUSE00001324191.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	CDS	37233619	37233645	.	-	0	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 10; exon_id "ENSMUSE00001324191.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	stop_codon	37233616	37233618	.	-	0	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 10; exon_id "ENSMUSE00001324191.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	UTR	37259560	37259603	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 1; exon_id "ENSMUSE00001328159.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	UTR	37258182	37258195	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 2; exon_id "ENSMUSE00001327116.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	UTR	37233420	37233618	.	-	.	gene_id "ENSMUSG00000101157.1"; transcript_id "ENSMUST00000190782.1"; gene_type "protein_coding"; gene_name "Gm20905"; transcript_type "protein_coding"; transcript_name "Gm20905-201"; exon_number 10; exon_id "ENSMUSE00001324191.1"; level 2; protein_id "ENSMUSP00000140730.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047552.1"; havana_transcript "OTTMUST00000122660.1";
mm10-chrY	HAVANA	gene	37364052	37364747	.	+	.	gene_id "ENSMUSG00000099712.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29411"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047553.1";
mm10-chrY	HAVANA	transcript	37364052	37364747	.	+	.	gene_id "ENSMUSG00000099712.1"; transcript_id "ENSMUST00000189889.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29411"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29411-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047553.1"; havana_transcript "OTTMUST00000122661.1";
mm10-chrY	HAVANA	exon	37364052	37364747	.	+	.	gene_id "ENSMUSG00000099712.1"; transcript_id "ENSMUST00000189889.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29411"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29411-201"; exon_number 1; exon_id "ENSMUSE00001335007.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047553.1"; havana_transcript "OTTMUST00000122661.1";
mm10-chrY	HAVANA	gene	37400946	37401560	.	+	.	gene_id "ENSMUSG00000099586.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28222"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047554.1";
mm10-chrY	HAVANA	transcript	37400946	37401560	.	+	.	gene_id "ENSMUSG00000099586.1"; transcript_id "ENSMUST00000191210.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28222"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28222-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047554.1"; havana_transcript "OTTMUST00000122662.1";
mm10-chrY	HAVANA	exon	37400946	37401560	.	+	.	gene_id "ENSMUSG00000099586.1"; transcript_id "ENSMUST00000191210.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28222"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28222-201"; exon_number 1; exon_id "ENSMUSE00001320364.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047554.1"; havana_transcript "OTTMUST00000122662.1";
mm10-chrY	HAVANA	gene	37430480	37431175	.	+	.	gene_id "ENSMUSG00000100066.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21835"; level 2; havana_gene "OTTMUSG00000047555.1";
mm10-chrY	HAVANA	transcript	37430480	37431175	.	+	.	gene_id "ENSMUSG00000100066.1"; transcript_id "ENSMUST00000190671.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21835"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21835-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047555.1"; havana_transcript "OTTMUST00000122663.1";
mm10-chrY	HAVANA	exon	37430480	37431175	.	+	.	gene_id "ENSMUSG00000100066.1"; transcript_id "ENSMUST00000190671.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21835"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21835-201"; exon_number 1; exon_id "ENSMUSE00001321045.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047555.1"; havana_transcript "OTTMUST00000122663.1";
mm10-chrY	HAVANA	gene	37547328	37550565	.	-	.	gene_id "ENSMUSG00000101879.1"; gene_type "lincRNA"; gene_name "Gm28820"; level 2; havana_gene "OTTMUSG00000047556.1";
mm10-chrY	HAVANA	transcript	37547328	37550565	.	-	.	gene_id "ENSMUSG00000101879.1"; transcript_id "ENSMUST00000188530.1"; gene_type "lincRNA"; gene_name "Gm28820"; transcript_type "lincRNA"; transcript_name "Gm28820-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047556.1"; havana_transcript "OTTMUST00000122664.1";
mm10-chrY	HAVANA	exon	37549927	37550565	.	-	.	gene_id "ENSMUSG00000101879.1"; transcript_id "ENSMUST00000188530.1"; gene_type "lincRNA"; gene_name "Gm28820"; transcript_type "lincRNA"; transcript_name "Gm28820-201"; exon_number 1; exon_id "ENSMUSE00001333639.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047556.1"; havana_transcript "OTTMUST00000122664.1";
mm10-chrY	HAVANA	exon	37549256	37549441	.	-	.	gene_id "ENSMUSG00000101879.1"; transcript_id "ENSMUST00000188530.1"; gene_type "lincRNA"; gene_name "Gm28820"; transcript_type "lincRNA"; transcript_name "Gm28820-201"; exon_number 2; exon_id "ENSMUSE00001330419.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047556.1"; havana_transcript "OTTMUST00000122664.1";
mm10-chrY	HAVANA	exon	37548343	37548526	.	-	.	gene_id "ENSMUSG00000101879.1"; transcript_id "ENSMUST00000188530.1"; gene_type "lincRNA"; gene_name "Gm28820"; transcript_type "lincRNA"; transcript_name "Gm28820-201"; exon_number 3; exon_id "ENSMUSE00001324129.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047556.1"; havana_transcript "OTTMUST00000122664.1";
mm10-chrY	HAVANA	exon	37547328	37547816	.	-	.	gene_id "ENSMUSG00000101879.1"; transcript_id "ENSMUST00000188530.1"; gene_type "lincRNA"; gene_name "Gm28820"; transcript_type "lincRNA"; transcript_name "Gm28820-201"; exon_number 4; exon_id "ENSMUSE00001325473.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047556.1"; havana_transcript "OTTMUST00000122664.1";
mm10-chrY	HAVANA	transcript	37547748	37550112	.	-	.	gene_id "ENSMUSG00000101879.1"; transcript_id "ENSMUST00000190197.1"; gene_type "lincRNA"; gene_name "Gm28820"; transcript_type "lincRNA"; transcript_name "Gm28820-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047556.1"; havana_transcript "OTTMUST00000122665.1";
mm10-chrY	HAVANA	exon	37549927	37550112	.	-	.	gene_id "ENSMUSG00000101879.1"; transcript_id "ENSMUST00000190197.1"; gene_type "lincRNA"; gene_name "Gm28820"; transcript_type "lincRNA"; transcript_name "Gm28820-202"; exon_number 1; exon_id "ENSMUSE00001321925.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047556.1"; havana_transcript "OTTMUST00000122665.1";
mm10-chrY	HAVANA	exon	37549256	37549437	.	-	.	gene_id "ENSMUSG00000101879.1"; transcript_id "ENSMUST00000190197.1"; gene_type "lincRNA"; gene_name "Gm28820"; transcript_type "lincRNA"; transcript_name "Gm28820-202"; exon_number 2; exon_id "ENSMUSE00001324353.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047556.1"; havana_transcript "OTTMUST00000122665.1";
mm10-chrY	HAVANA	exon	37547748	37547816	.	-	.	gene_id "ENSMUSG00000101879.1"; transcript_id "ENSMUST00000190197.1"; gene_type "lincRNA"; gene_name "Gm28820"; transcript_type "lincRNA"; transcript_name "Gm28820-202"; exon_number 3; exon_id "ENSMUSE00001320923.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047556.1"; havana_transcript "OTTMUST00000122665.1";
mm10-chrY	HAVANA	gene	37584337	37584651	.	+	.	gene_id "ENSMUSG00000099412.1"; gene_type "processed_pseudogene"; gene_name "Gm28223"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047557.1";
mm10-chrY	HAVANA	transcript	37584337	37584651	.	+	.	gene_id "ENSMUSG00000099412.1"; transcript_id "ENSMUST00000190469.1"; gene_type "processed_pseudogene"; gene_name "Gm28223"; transcript_type "processed_pseudogene"; transcript_name "Gm28223-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047557.1"; havana_transcript "OTTMUST00000122666.1";
mm10-chrY	HAVANA	exon	37584337	37584651	.	+	.	gene_id "ENSMUSG00000099412.1"; transcript_id "ENSMUST00000190469.1"; gene_type "processed_pseudogene"; gene_name "Gm28223"; transcript_type "processed_pseudogene"; transcript_name "Gm28223-201"; exon_number 1; exon_id "ENSMUSE00001323668.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047557.1"; havana_transcript "OTTMUST00000122666.1";
mm10-chrY	HAVANA	gene	37620892	37621587	.	+	.	gene_id "ENSMUSG00000101831.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29412"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047558.1";
mm10-chrY	HAVANA	transcript	37620892	37621587	.	+	.	gene_id "ENSMUSG00000101831.1"; transcript_id "ENSMUST00000185869.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29412"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29412-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047558.1"; havana_transcript "OTTMUST00000122667.1";
mm10-chrY	HAVANA	exon	37620892	37621587	.	+	.	gene_id "ENSMUSG00000101831.1"; transcript_id "ENSMUST00000185869.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29412"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29412-201"; exon_number 1; exon_id "ENSMUSE00001320997.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047558.1"; havana_transcript "OTTMUST00000122667.1";
mm10-chrY	HAVANA	gene	37681820	37706635	.	-	.	gene_id "ENSMUSG00000100428.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29413"; level 2; havana_gene "OTTMUSG00000047559.1";
mm10-chrY	HAVANA	transcript	37681820	37706635	.	-	.	gene_id "ENSMUSG00000100428.1"; transcript_id "ENSMUST00000186019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29413"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29413-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047559.1"; havana_transcript "OTTMUST00000122668.1";
mm10-chrY	HAVANA	exon	37706504	37706635	.	-	.	gene_id "ENSMUSG00000100428.1"; transcript_id "ENSMUST00000186019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29413"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29413-201"; exon_number 1; exon_id "ENSMUSE00001335882.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047559.1"; havana_transcript "OTTMUST00000122668.1";
mm10-chrY	HAVANA	exon	37701109	37701175	.	-	.	gene_id "ENSMUSG00000100428.1"; transcript_id "ENSMUST00000186019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29413"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29413-201"; exon_number 2; exon_id "ENSMUSE00001332256.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047559.1"; havana_transcript "OTTMUST00000122668.1";
mm10-chrY	HAVANA	exon	37700406	37700440	.	-	.	gene_id "ENSMUSG00000100428.1"; transcript_id "ENSMUST00000186019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29413"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29413-201"; exon_number 3; exon_id "ENSMUSE00001332019.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047559.1"; havana_transcript "OTTMUST00000122668.1";
mm10-chrY	HAVANA	exon	37693335	37693401	.	-	.	gene_id "ENSMUSG00000100428.1"; transcript_id "ENSMUST00000186019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29413"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29413-201"; exon_number 4; exon_id "ENSMUSE00001335273.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047559.1"; havana_transcript "OTTMUST00000122668.1";
mm10-chrY	HAVANA	exon	37692717	37692751	.	-	.	gene_id "ENSMUSG00000100428.1"; transcript_id "ENSMUST00000186019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29413"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29413-201"; exon_number 5; exon_id "ENSMUSE00001326360.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047559.1"; havana_transcript "OTTMUST00000122668.1";
mm10-chrY	HAVANA	exon	37685430	37685547	.	-	.	gene_id "ENSMUSG00000100428.1"; transcript_id "ENSMUST00000186019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29413"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29413-201"; exon_number 6; exon_id "ENSMUSE00001319407.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047559.1"; havana_transcript "OTTMUST00000122668.1";
mm10-chrY	HAVANA	exon	37684561	37684660	.	-	.	gene_id "ENSMUSG00000100428.1"; transcript_id "ENSMUST00000186019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29413"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29413-201"; exon_number 7; exon_id "ENSMUSE00001324836.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047559.1"; havana_transcript "OTTMUST00000122668.1";
mm10-chrY	HAVANA	exon	37682406	37682504	.	-	.	gene_id "ENSMUSG00000100428.1"; transcript_id "ENSMUST00000186019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29413"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29413-201"; exon_number 8; exon_id "ENSMUSE00001321092.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047559.1"; havana_transcript "OTTMUST00000122668.1";
mm10-chrY	HAVANA	exon	37681820	37682046	.	-	.	gene_id "ENSMUSG00000100428.1"; transcript_id "ENSMUST00000186019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29413"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29413-201"; exon_number 9; exon_id "ENSMUSE00001335044.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047559.1"; havana_transcript "OTTMUST00000122668.1";
mm10-chrY	HAVANA	gene	37808837	37812183	.	+	.	gene_id "ENSMUSG00000099601.1"; gene_type "lincRNA"; gene_name "Gm29671"; level 2; havana_gene "OTTMUSG00000047560.1";
mm10-chrY	HAVANA	transcript	37808837	37812183	.	+	.	gene_id "ENSMUSG00000099601.1"; transcript_id "ENSMUST00000189438.1"; gene_type "lincRNA"; gene_name "Gm29671"; transcript_type "lincRNA"; transcript_name "Gm29671-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047560.1"; havana_transcript "OTTMUST00000122669.1";
mm10-chrY	HAVANA	exon	37808837	37809059	.	+	.	gene_id "ENSMUSG00000099601.1"; transcript_id "ENSMUST00000189438.1"; gene_type "lincRNA"; gene_name "Gm29671"; transcript_type "lincRNA"; transcript_name "Gm29671-201"; exon_number 1; exon_id "ENSMUSE00001321787.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047560.1"; havana_transcript "OTTMUST00000122669.1";
mm10-chrY	HAVANA	exon	37810241	37812183	.	+	.	gene_id "ENSMUSG00000099601.1"; transcript_id "ENSMUST00000189438.1"; gene_type "lincRNA"; gene_name "Gm29671"; transcript_type "lincRNA"; transcript_name "Gm29671-201"; exon_number 2; exon_id "ENSMUSE00001333629.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047560.1"; havana_transcript "OTTMUST00000122669.1";
mm10-chrY	HAVANA	gene	37818062	37818757	.	+	.	gene_id "ENSMUSG00000101704.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21878"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047561.1";
mm10-chrY	HAVANA	transcript	37818062	37818757	.	+	.	gene_id "ENSMUSG00000101704.1"; transcript_id "ENSMUST00000191365.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21878"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21878-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047561.1"; havana_transcript "OTTMUST00000122670.1";
mm10-chrY	HAVANA	exon	37818062	37818757	.	+	.	gene_id "ENSMUSG00000101704.1"; transcript_id "ENSMUST00000191365.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21878"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21878-201"; exon_number 1; exon_id "ENSMUSE00001325302.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047561.1"; havana_transcript "OTTMUST00000122670.1";
mm10-chrY	HAVANA	gene	37854963	37855577	.	+	.	gene_id "ENSMUSG00000101349.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28162"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047562.1";
mm10-chrY	HAVANA	transcript	37854963	37855577	.	+	.	gene_id "ENSMUSG00000101349.1"; transcript_id "ENSMUST00000190545.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28162"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28162-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047562.1"; havana_transcript "OTTMUST00000122671.1";
mm10-chrY	HAVANA	exon	37854963	37855577	.	+	.	gene_id "ENSMUSG00000101349.1"; transcript_id "ENSMUST00000190545.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28162"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28162-201"; exon_number 1; exon_id "ENSMUSE00001327463.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047562.1"; havana_transcript "OTTMUST00000122671.1";
mm10-chrY	HAVANA	gene	37884636	37885331	.	+	.	gene_id "ENSMUSG00000101710.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20922"; level 2; havana_gene "OTTMUSG00000047563.1";
mm10-chrY	HAVANA	transcript	37884636	37885331	.	+	.	gene_id "ENSMUSG00000101710.1"; transcript_id "ENSMUST00000186497.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20922"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20922-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047563.1"; havana_transcript "OTTMUST00000122672.1";
mm10-chrY	HAVANA	exon	37884636	37885331	.	+	.	gene_id "ENSMUSG00000101710.1"; transcript_id "ENSMUST00000186497.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20922"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20922-201"; exon_number 1; exon_id "ENSMUSE00001326433.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047563.1"; havana_transcript "OTTMUST00000122672.1";
mm10-chrY	HAVANA	gene	37957811	37960145	.	+	.	gene_id "ENSMUSG00000094575.2"; gene_type "protein_coding"; gene_name "Gm20738"; level 2; havana_gene "OTTMUSG00000047634.2";
mm10-chrY	HAVANA	transcript	37957811	37960145	.	+	.	gene_id "ENSMUSG00000094575.2"; transcript_id "ENSMUST00000177666.2"; gene_type "protein_coding"; gene_name "Gm20738"; transcript_type "protein_coding"; transcript_name "Gm20738-201"; level 2; protein_id "ENSMUSP00000136636.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85877.1"; havana_gene "OTTMUSG00000047634.2"; havana_transcript "OTTMUST00000122800.2";
mm10-chrY	HAVANA	exon	37957811	37957934	.	+	.	gene_id "ENSMUSG00000094575.2"; transcript_id "ENSMUST00000177666.2"; gene_type "protein_coding"; gene_name "Gm20738"; transcript_type "protein_coding"; transcript_name "Gm20738-201"; exon_number 1; exon_id "ENSMUSE00000906669.3"; level 2; protein_id "ENSMUSP00000136636.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85877.1"; havana_gene "OTTMUSG00000047634.2"; havana_transcript "OTTMUST00000122800.2";
mm10-chrY	HAVANA	exon	37959045	37960145	.	+	.	gene_id "ENSMUSG00000094575.2"; transcript_id "ENSMUST00000177666.2"; gene_type "protein_coding"; gene_name "Gm20738"; transcript_type "protein_coding"; transcript_name "Gm20738-201"; exon_number 2; exon_id "ENSMUSE00000985592.2"; level 2; protein_id "ENSMUSP00000136636.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85877.1"; havana_gene "OTTMUSG00000047634.2"; havana_transcript "OTTMUST00000122800.2";
mm10-chrY	HAVANA	CDS	37959327	37960007	.	+	0	gene_id "ENSMUSG00000094575.2"; transcript_id "ENSMUST00000177666.2"; gene_type "protein_coding"; gene_name "Gm20738"; transcript_type "protein_coding"; transcript_name "Gm20738-201"; exon_number 2; exon_id "ENSMUSE00000985592.2"; level 2; protein_id "ENSMUSP00000136636.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85877.1"; havana_gene "OTTMUSG00000047634.2"; havana_transcript "OTTMUST00000122800.2";
mm10-chrY	HAVANA	start_codon	37959327	37959329	.	+	0	gene_id "ENSMUSG00000094575.2"; transcript_id "ENSMUST00000177666.2"; gene_type "protein_coding"; gene_name "Gm20738"; transcript_type "protein_coding"; transcript_name "Gm20738-201"; exon_number 2; exon_id "ENSMUSE00000985592.2"; level 2; protein_id "ENSMUSP00000136636.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85877.1"; havana_gene "OTTMUSG00000047634.2"; havana_transcript "OTTMUST00000122800.2";
mm10-chrY	HAVANA	stop_codon	37960008	37960010	.	+	0	gene_id "ENSMUSG00000094575.2"; transcript_id "ENSMUST00000177666.2"; gene_type "protein_coding"; gene_name "Gm20738"; transcript_type "protein_coding"; transcript_name "Gm20738-201"; exon_number 2; exon_id "ENSMUSE00000985592.2"; level 2; protein_id "ENSMUSP00000136636.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85877.1"; havana_gene "OTTMUSG00000047634.2"; havana_transcript "OTTMUST00000122800.2";
mm10-chrY	HAVANA	UTR	37957811	37957934	.	+	.	gene_id "ENSMUSG00000094575.2"; transcript_id "ENSMUST00000177666.2"; gene_type "protein_coding"; gene_name "Gm20738"; transcript_type "protein_coding"; transcript_name "Gm20738-201"; exon_number 1; exon_id "ENSMUSE00000906669.3"; level 2; protein_id "ENSMUSP00000136636.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85877.1"; havana_gene "OTTMUSG00000047634.2"; havana_transcript "OTTMUST00000122800.2";
mm10-chrY	HAVANA	UTR	37959045	37959326	.	+	.	gene_id "ENSMUSG00000094575.2"; transcript_id "ENSMUST00000177666.2"; gene_type "protein_coding"; gene_name "Gm20738"; transcript_type "protein_coding"; transcript_name "Gm20738-201"; exon_number 2; exon_id "ENSMUSE00000985592.2"; level 2; protein_id "ENSMUSP00000136636.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85877.1"; havana_gene "OTTMUSG00000047634.2"; havana_transcript "OTTMUST00000122800.2";
mm10-chrY	HAVANA	UTR	37960008	37960145	.	+	.	gene_id "ENSMUSG00000094575.2"; transcript_id "ENSMUST00000177666.2"; gene_type "protein_coding"; gene_name "Gm20738"; transcript_type "protein_coding"; transcript_name "Gm20738-201"; exon_number 2; exon_id "ENSMUSE00000985592.2"; level 2; protein_id "ENSMUSP00000136636.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85877.1"; havana_gene "OTTMUSG00000047634.2"; havana_transcript "OTTMUST00000122800.2";
mm10-chrY	HAVANA	gene	38067042	38070280	.	-	.	gene_id "ENSMUSG00000100952.1"; gene_type "lincRNA"; gene_name "Gm28545"; level 2; havana_gene "OTTMUSG00000047635.1";
mm10-chrY	HAVANA	transcript	38067042	38070280	.	-	.	gene_id "ENSMUSG00000100952.1"; transcript_id "ENSMUST00000188667.1"; gene_type "lincRNA"; gene_name "Gm28545"; transcript_type "lincRNA"; transcript_name "Gm28545-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047635.1"; havana_transcript "OTTMUST00000122801.1";
mm10-chrY	HAVANA	exon	38069641	38070280	.	-	.	gene_id "ENSMUSG00000100952.1"; transcript_id "ENSMUST00000188667.1"; gene_type "lincRNA"; gene_name "Gm28545"; transcript_type "lincRNA"; transcript_name "Gm28545-201"; exon_number 1; exon_id "ENSMUSE00001325979.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047635.1"; havana_transcript "OTTMUST00000122801.1";
mm10-chrY	HAVANA	exon	38068970	38069155	.	-	.	gene_id "ENSMUSG00000100952.1"; transcript_id "ENSMUST00000188667.1"; gene_type "lincRNA"; gene_name "Gm28545"; transcript_type "lincRNA"; transcript_name "Gm28545-201"; exon_number 2; exon_id "ENSMUSE00001335774.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047635.1"; havana_transcript "OTTMUST00000122801.1";
mm10-chrY	HAVANA	exon	38068057	38068240	.	-	.	gene_id "ENSMUSG00000100952.1"; transcript_id "ENSMUST00000188667.1"; gene_type "lincRNA"; gene_name "Gm28545"; transcript_type "lincRNA"; transcript_name "Gm28545-201"; exon_number 3; exon_id "ENSMUSE00001328026.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047635.1"; havana_transcript "OTTMUST00000122801.1";
mm10-chrY	HAVANA	exon	38067042	38067530	.	-	.	gene_id "ENSMUSG00000100952.1"; transcript_id "ENSMUST00000188667.1"; gene_type "lincRNA"; gene_name "Gm28545"; transcript_type "lincRNA"; transcript_name "Gm28545-201"; exon_number 4; exon_id "ENSMUSE00001319280.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047635.1"; havana_transcript "OTTMUST00000122801.1";
mm10-chrY	HAVANA	transcript	38067462	38069827	.	-	.	gene_id "ENSMUSG00000100952.1"; transcript_id "ENSMUST00000191476.1"; gene_type "lincRNA"; gene_name "Gm28545"; transcript_type "lincRNA"; transcript_name "Gm28545-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047635.1"; havana_transcript "OTTMUST00000122802.1";
mm10-chrY	HAVANA	exon	38069641	38069827	.	-	.	gene_id "ENSMUSG00000100952.1"; transcript_id "ENSMUST00000191476.1"; gene_type "lincRNA"; gene_name "Gm28545"; transcript_type "lincRNA"; transcript_name "Gm28545-202"; exon_number 1; exon_id "ENSMUSE00001332004.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047635.1"; havana_transcript "OTTMUST00000122802.1";
mm10-chrY	HAVANA	exon	38068970	38069151	.	-	.	gene_id "ENSMUSG00000100952.1"; transcript_id "ENSMUST00000191476.1"; gene_type "lincRNA"; gene_name "Gm28545"; transcript_type "lincRNA"; transcript_name "Gm28545-202"; exon_number 2; exon_id "ENSMUSE00001322274.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047635.1"; havana_transcript "OTTMUST00000122802.1";
mm10-chrY	HAVANA	exon	38067462	38067530	.	-	.	gene_id "ENSMUSG00000100952.1"; transcript_id "ENSMUST00000191476.1"; gene_type "lincRNA"; gene_name "Gm28545"; transcript_type "lincRNA"; transcript_name "Gm28545-202"; exon_number 3; exon_id "ENSMUSE00001321895.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047635.1"; havana_transcript "OTTMUST00000122802.1";
mm10-chrY	HAVANA	gene	38102223	38105565	.	+	.	gene_id "ENSMUSG00000099730.1"; gene_type "lincRNA"; gene_name "Gm28547"; level 2; havana_gene "OTTMUSG00000047636.1";
mm10-chrY	HAVANA	transcript	38102223	38105565	.	+	.	gene_id "ENSMUSG00000099730.1"; transcript_id "ENSMUST00000186357.1"; gene_type "lincRNA"; gene_name "Gm28547"; transcript_type "lincRNA"; transcript_name "Gm28547-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047636.1"; havana_transcript "OTTMUST00000122803.1";
mm10-chrY	HAVANA	exon	38102223	38102445	.	+	.	gene_id "ENSMUSG00000099730.1"; transcript_id "ENSMUST00000186357.1"; gene_type "lincRNA"; gene_name "Gm28547"; transcript_type "lincRNA"; transcript_name "Gm28547-201"; exon_number 1; exon_id "ENSMUSE00001329781.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047636.1"; havana_transcript "OTTMUST00000122803.1";
mm10-chrY	HAVANA	exon	38103622	38105565	.	+	.	gene_id "ENSMUSG00000099730.1"; transcript_id "ENSMUST00000186357.1"; gene_type "lincRNA"; gene_name "Gm28547"; transcript_type "lincRNA"; transcript_name "Gm28547-201"; exon_number 2; exon_id "ENSMUSE00001329499.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047636.1"; havana_transcript "OTTMUST00000122803.1";
mm10-chrY	HAVANA	gene	38143521	38144135	.	+	.	gene_id "ENSMUSG00000101873.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28546"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047637.1";
mm10-chrY	HAVANA	transcript	38143521	38144135	.	+	.	gene_id "ENSMUSG00000101873.1"; transcript_id "ENSMUST00000188221.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28546-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047637.1"; havana_transcript "OTTMUST00000122804.1";
mm10-chrY	HAVANA	exon	38143521	38144135	.	+	.	gene_id "ENSMUSG00000101873.1"; transcript_id "ENSMUST00000188221.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28546-201"; exon_number 1; exon_id "ENSMUSE00001325594.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047637.1"; havana_transcript "OTTMUST00000122804.1";
mm10-chrY	HAVANA	gene	38173015	38173710	.	+	.	gene_id "ENSMUSG00000100203.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21924"; level 2; havana_gene "OTTMUSG00000047638.1";
mm10-chrY	HAVANA	transcript	38173015	38173710	.	+	.	gene_id "ENSMUSG00000100203.1"; transcript_id "ENSMUST00000191308.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21924"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21924-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047638.1"; havana_transcript "OTTMUST00000122805.1";
mm10-chrY	HAVANA	exon	38173015	38173710	.	+	.	gene_id "ENSMUSG00000100203.1"; transcript_id "ENSMUST00000191308.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21924"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21924-201"; exon_number 1; exon_id "ENSMUSE00001326301.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047638.1"; havana_transcript "OTTMUST00000122805.1";
mm10-chrY	HAVANA	gene	38247748	38248443	.	+	.	gene_id "ENSMUSG00000099460.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21735"; level 2; havana_gene "OTTMUSG00000047639.1";
mm10-chrY	HAVANA	transcript	38247748	38248443	.	+	.	gene_id "ENSMUSG00000099460.1"; transcript_id "ENSMUST00000190360.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21735"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21735-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047639.1"; havana_transcript "OTTMUST00000122806.1";
mm10-chrY	HAVANA	exon	38247748	38248443	.	+	.	gene_id "ENSMUSG00000099460.1"; transcript_id "ENSMUST00000190360.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21735"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21735-201"; exon_number 1; exon_id "ENSMUSE00001318819.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047639.1"; havana_transcript "OTTMUST00000122806.1";
mm10-chrY	HAVANA	gene	38340085	38343323	.	-	.	gene_id "ENSMUSG00000099807.1"; gene_type "lincRNA"; gene_name "Gm28771"; level 2; havana_gene "OTTMUSG00000047640.1";
mm10-chrY	HAVANA	transcript	38340085	38343323	.	-	.	gene_id "ENSMUSG00000099807.1"; transcript_id "ENSMUST00000189399.1"; gene_type "lincRNA"; gene_name "Gm28771"; transcript_type "lincRNA"; transcript_name "Gm28771-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047640.1"; havana_transcript "OTTMUST00000122807.1";
mm10-chrY	HAVANA	exon	38342685	38343323	.	-	.	gene_id "ENSMUSG00000099807.1"; transcript_id "ENSMUST00000189399.1"; gene_type "lincRNA"; gene_name "Gm28771"; transcript_type "lincRNA"; transcript_name "Gm28771-202"; exon_number 1; exon_id "ENSMUSE00001318001.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047640.1"; havana_transcript "OTTMUST00000122807.1";
mm10-chrY	HAVANA	exon	38342014	38342199	.	-	.	gene_id "ENSMUSG00000099807.1"; transcript_id "ENSMUST00000189399.1"; gene_type "lincRNA"; gene_name "Gm28771"; transcript_type "lincRNA"; transcript_name "Gm28771-202"; exon_number 2; exon_id "ENSMUSE00001320070.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047640.1"; havana_transcript "OTTMUST00000122807.1";
mm10-chrY	HAVANA	exon	38341101	38341284	.	-	.	gene_id "ENSMUSG00000099807.1"; transcript_id "ENSMUST00000189399.1"; gene_type "lincRNA"; gene_name "Gm28771"; transcript_type "lincRNA"; transcript_name "Gm28771-202"; exon_number 3; exon_id "ENSMUSE00001329235.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047640.1"; havana_transcript "OTTMUST00000122807.1";
mm10-chrY	HAVANA	exon	38340085	38340574	.	-	.	gene_id "ENSMUSG00000099807.1"; transcript_id "ENSMUST00000189399.1"; gene_type "lincRNA"; gene_name "Gm28771"; transcript_type "lincRNA"; transcript_name "Gm28771-202"; exon_number 4; exon_id "ENSMUSE00001322883.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047640.1"; havana_transcript "OTTMUST00000122807.1";
mm10-chrY	HAVANA	transcript	38340506	38342870	.	-	.	gene_id "ENSMUSG00000099807.1"; transcript_id "ENSMUST00000185747.1"; gene_type "lincRNA"; gene_name "Gm28771"; transcript_type "lincRNA"; transcript_name "Gm28771-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047640.1"; havana_transcript "OTTMUST00000122808.1";
mm10-chrY	HAVANA	exon	38342685	38342870	.	-	.	gene_id "ENSMUSG00000099807.1"; transcript_id "ENSMUST00000185747.1"; gene_type "lincRNA"; gene_name "Gm28771"; transcript_type "lincRNA"; transcript_name "Gm28771-201"; exon_number 1; exon_id "ENSMUSE00001323518.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047640.1"; havana_transcript "OTTMUST00000122808.1";
mm10-chrY	HAVANA	exon	38342014	38342195	.	-	.	gene_id "ENSMUSG00000099807.1"; transcript_id "ENSMUST00000185747.1"; gene_type "lincRNA"; gene_name "Gm28771"; transcript_type "lincRNA"; transcript_name "Gm28771-201"; exon_number 2; exon_id "ENSMUSE00001328148.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047640.1"; havana_transcript "OTTMUST00000122808.1";
mm10-chrY	HAVANA	exon	38340506	38340574	.	-	.	gene_id "ENSMUSG00000099807.1"; transcript_id "ENSMUST00000185747.1"; gene_type "lincRNA"; gene_name "Gm28771"; transcript_type "lincRNA"; transcript_name "Gm28771-201"; exon_number 3; exon_id "ENSMUSE00001322696.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047640.1"; havana_transcript "OTTMUST00000122808.1";
mm10-chrY	HAVANA	gene	38376499	38379839	.	+	.	gene_id "ENSMUSG00000101435.1"; gene_type "lincRNA"; gene_name "Gm28772"; level 2; havana_gene "OTTMUSG00000047641.1";
mm10-chrY	HAVANA	transcript	38376499	38379839	.	+	.	gene_id "ENSMUSG00000101435.1"; transcript_id "ENSMUST00000189554.1"; gene_type "lincRNA"; gene_name "Gm28772"; transcript_type "lincRNA"; transcript_name "Gm28772-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047641.1"; havana_transcript "OTTMUST00000122809.1";
mm10-chrY	HAVANA	exon	38376499	38376721	.	+	.	gene_id "ENSMUSG00000101435.1"; transcript_id "ENSMUST00000189554.1"; gene_type "lincRNA"; gene_name "Gm28772"; transcript_type "lincRNA"; transcript_name "Gm28772-201"; exon_number 1; exon_id "ENSMUSE00001333601.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047641.1"; havana_transcript "OTTMUST00000122809.1";
mm10-chrY	HAVANA	exon	38377898	38379839	.	+	.	gene_id "ENSMUSG00000101435.1"; transcript_id "ENSMUST00000189554.1"; gene_type "lincRNA"; gene_name "Gm28772"; transcript_type "lincRNA"; transcript_name "Gm28772-201"; exon_number 2; exon_id "ENSMUSE00001319179.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047641.1"; havana_transcript "OTTMUST00000122809.1";
mm10-chrY	HAVANA	gene	38414638	38415333	.	+	.	gene_id "ENSMUSG00000100883.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28773"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047642.1";
mm10-chrY	HAVANA	transcript	38414638	38415333	.	+	.	gene_id "ENSMUSG00000100883.1"; transcript_id "ENSMUST00000187925.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28773"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28773-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047642.1"; havana_transcript "OTTMUST00000122810.1";
mm10-chrY	HAVANA	exon	38414638	38415333	.	+	.	gene_id "ENSMUSG00000100883.1"; transcript_id "ENSMUST00000187925.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28773"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28773-201"; exon_number 1; exon_id "ENSMUSE00001332856.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047642.1"; havana_transcript "OTTMUST00000122810.1";
mm10-chrY	HAVANA	gene	38476061	38502238	.	-	.	gene_id "ENSMUSG00000100892.1"; gene_type "protein_coding"; gene_name "Gm20897"; level 2; havana_gene "OTTMUSG00000047643.1";
mm10-chrY	HAVANA	transcript	38476061	38502238	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	exon	38502195	38502238	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 1; exon_id "ENSMUSE00001322653.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	exon	38500698	38500829	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 2; exon_id "ENSMUSE00001329860.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	CDS	38500698	38500815	.	-	0	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 2; exon_id "ENSMUSE00001329860.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	start_codon	38500813	38500815	.	-	0	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 2; exon_id "ENSMUSE00001329860.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	exon	38495298	38495364	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 3; exon_id "ENSMUSE00001329241.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	CDS	38495298	38495364	.	-	2	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 3; exon_id "ENSMUSE00001329241.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	exon	38494614	38494648	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 4; exon_id "ENSMUSE00001335175.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	CDS	38494614	38494648	.	-	1	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 4; exon_id "ENSMUSE00001335175.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	exon	38487524	38487590	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 5; exon_id "ENSMUSE00001318309.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	CDS	38487524	38487590	.	-	2	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 5; exon_id "ENSMUSE00001318309.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	exon	38486910	38486944	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 6; exon_id "ENSMUSE00001326010.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	CDS	38486910	38486944	.	-	1	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 6; exon_id "ENSMUSE00001326010.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	exon	38479638	38479755	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 7; exon_id "ENSMUSE00001319379.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	CDS	38479638	38479755	.	-	2	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 7; exon_id "ENSMUSE00001319379.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	exon	38478780	38478879	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 8; exon_id "ENSMUSE00001326776.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	CDS	38478780	38478879	.	-	1	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 8; exon_id "ENSMUSE00001326776.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	exon	38476646	38476744	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 9; exon_id "ENSMUSE00001328862.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	CDS	38476646	38476744	.	-	0	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 9; exon_id "ENSMUSE00001328862.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	exon	38476061	38476286	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 10; exon_id "ENSMUSE00001328029.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	CDS	38476260	38476286	.	-	0	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 10; exon_id "ENSMUSE00001328029.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	stop_codon	38476257	38476259	.	-	0	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 10; exon_id "ENSMUSE00001328029.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	UTR	38502195	38502238	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 1; exon_id "ENSMUSE00001322653.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	UTR	38500816	38500829	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 2; exon_id "ENSMUSE00001329860.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	UTR	38476061	38476259	.	-	.	gene_id "ENSMUSG00000100892.1"; transcript_id "ENSMUST00000185240.1"; gene_type "protein_coding"; gene_name "Gm20897"; transcript_type "protein_coding"; transcript_name "Gm20897-201"; exon_number 10; exon_id "ENSMUSE00001328029.1"; level 2; protein_id "ENSMUSP00000140689.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047643.1"; havana_transcript "OTTMUST00000122811.1";
mm10-chrY	HAVANA	gene	38561063	38564300	.	-	.	gene_id "ENSMUSG00000101050.1"; gene_type "lincRNA"; gene_name "Gm28774"; level 2; havana_gene "OTTMUSG00000047644.1";
mm10-chrY	HAVANA	transcript	38561063	38564300	.	-	.	gene_id "ENSMUSG00000101050.1"; transcript_id "ENSMUST00000187087.1"; gene_type "lincRNA"; gene_name "Gm28774"; transcript_type "lincRNA"; transcript_name "Gm28774-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047644.1"; havana_transcript "OTTMUST00000122812.1";
mm10-chrY	HAVANA	exon	38563662	38564300	.	-	.	gene_id "ENSMUSG00000101050.1"; transcript_id "ENSMUST00000187087.1"; gene_type "lincRNA"; gene_name "Gm28774"; transcript_type "lincRNA"; transcript_name "Gm28774-201"; exon_number 1; exon_id "ENSMUSE00001333982.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047644.1"; havana_transcript "OTTMUST00000122812.1";
mm10-chrY	HAVANA	exon	38562991	38563176	.	-	.	gene_id "ENSMUSG00000101050.1"; transcript_id "ENSMUST00000187087.1"; gene_type "lincRNA"; gene_name "Gm28774"; transcript_type "lincRNA"; transcript_name "Gm28774-201"; exon_number 2; exon_id "ENSMUSE00001325737.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047644.1"; havana_transcript "OTTMUST00000122812.1";
mm10-chrY	HAVANA	exon	38562078	38562261	.	-	.	gene_id "ENSMUSG00000101050.1"; transcript_id "ENSMUST00000187087.1"; gene_type "lincRNA"; gene_name "Gm28774"; transcript_type "lincRNA"; transcript_name "Gm28774-201"; exon_number 3; exon_id "ENSMUSE00001328812.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047644.1"; havana_transcript "OTTMUST00000122812.1";
mm10-chrY	HAVANA	exon	38561063	38561551	.	-	.	gene_id "ENSMUSG00000101050.1"; transcript_id "ENSMUST00000187087.1"; gene_type "lincRNA"; gene_name "Gm28774"; transcript_type "lincRNA"; transcript_name "Gm28774-201"; exon_number 4; exon_id "ENSMUSE00001334134.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047644.1"; havana_transcript "OTTMUST00000122812.1";
mm10-chrY	HAVANA	transcript	38561483	38563847	.	-	.	gene_id "ENSMUSG00000101050.1"; transcript_id "ENSMUST00000188107.1"; gene_type "lincRNA"; gene_name "Gm28774"; transcript_type "lincRNA"; transcript_name "Gm28774-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047644.1"; havana_transcript "OTTMUST00000122813.1";
mm10-chrY	HAVANA	exon	38563662	38563847	.	-	.	gene_id "ENSMUSG00000101050.1"; transcript_id "ENSMUST00000188107.1"; gene_type "lincRNA"; gene_name "Gm28774"; transcript_type "lincRNA"; transcript_name "Gm28774-202"; exon_number 1; exon_id "ENSMUSE00001327809.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047644.1"; havana_transcript "OTTMUST00000122813.1";
mm10-chrY	HAVANA	exon	38562991	38563172	.	-	.	gene_id "ENSMUSG00000101050.1"; transcript_id "ENSMUST00000188107.1"; gene_type "lincRNA"; gene_name "Gm28774"; transcript_type "lincRNA"; transcript_name "Gm28774-202"; exon_number 2; exon_id "ENSMUSE00001321403.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047644.1"; havana_transcript "OTTMUST00000122813.1";
mm10-chrY	HAVANA	exon	38561483	38561551	.	-	.	gene_id "ENSMUSG00000101050.1"; transcript_id "ENSMUST00000188107.1"; gene_type "lincRNA"; gene_name "Gm28774"; transcript_type "lincRNA"; transcript_name "Gm28774-202"; exon_number 3; exon_id "ENSMUSE00001333384.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047644.1"; havana_transcript "OTTMUST00000122813.1";
mm10-chrY	ENSEMBL	gene	38574609	38575691	.	-	.	gene_id "ENSMUSG00000096379.1"; gene_type "protein_coding"; gene_name "Gm21732"; level 3;
mm10-chrY	ENSEMBL	transcript	38574609	38575691	.	-	.	gene_id "ENSMUSG00000096379.1"; transcript_id "ENSMUST00000179309.1"; gene_type "protein_coding"; gene_name "Gm21732"; transcript_type "protein_coding"; transcript_name "Gm21732-201"; level 3; protein_id "ENSMUSP00000136161.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	38574609	38575691	.	-	.	gene_id "ENSMUSG00000096379.1"; transcript_id "ENSMUST00000179309.1"; gene_type "protein_coding"; gene_name "Gm21732"; transcript_type "protein_coding"; transcript_name "Gm21732-201"; exon_number 1; exon_id "ENSMUSE00001028730.1"; level 3; protein_id "ENSMUSP00000136161.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	38574609	38575691	.	-	0	gene_id "ENSMUSG00000096379.1"; transcript_id "ENSMUST00000179309.1"; gene_type "protein_coding"; gene_name "Gm21732"; transcript_type "protein_coding"; transcript_name "Gm21732-201"; exon_number 1; exon_id "ENSMUSE00001028730.1"; level 3; protein_id "ENSMUSP00000136161.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	38575689	38575691	.	-	0	gene_id "ENSMUSG00000096379.1"; transcript_id "ENSMUST00000179309.1"; gene_type "protein_coding"; gene_name "Gm21732"; transcript_type "protein_coding"; transcript_name "Gm21732-201"; exon_number 1; exon_id "ENSMUSE00001028730.1"; level 3; protein_id "ENSMUSP00000136161.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	38596217	38599560	.	+	.	gene_id "ENSMUSG00000099793.1"; gene_type "lincRNA"; gene_name "Gm28775"; level 2; havana_gene "OTTMUSG00000047645.1";
mm10-chrY	HAVANA	transcript	38596217	38599560	.	+	.	gene_id "ENSMUSG00000099793.1"; transcript_id "ENSMUST00000186918.1"; gene_type "lincRNA"; gene_name "Gm28775"; transcript_type "lincRNA"; transcript_name "Gm28775-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000047645.1"; havana_transcript "OTTMUST00000122814.1";
mm10-chrY	HAVANA	exon	38596217	38596439	.	+	.	gene_id "ENSMUSG00000099793.1"; transcript_id "ENSMUST00000186918.1"; gene_type "lincRNA"; gene_name "Gm28775"; transcript_type "lincRNA"; transcript_name "Gm28775-201"; exon_number 1; exon_id "ENSMUSE00001324381.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000047645.1"; havana_transcript "OTTMUST00000122814.1";
mm10-chrY	HAVANA	exon	38597617	38599560	.	+	.	gene_id "ENSMUSG00000099793.1"; transcript_id "ENSMUST00000186918.1"; gene_type "lincRNA"; gene_name "Gm28775"; transcript_type "lincRNA"; transcript_name "Gm28775-201"; exon_number 2; exon_id "ENSMUSE00001322043.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000047645.1"; havana_transcript "OTTMUST00000122814.1";
mm10-chrY	HAVANA	gene	38605682	38606377	.	+	.	gene_id "ENSMUSG00000100699.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21765"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047646.1";
mm10-chrY	HAVANA	transcript	38605682	38606377	.	+	.	gene_id "ENSMUSG00000100699.1"; transcript_id "ENSMUST00000189913.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21765"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21765-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047646.1"; havana_transcript "OTTMUST00000122815.1";
mm10-chrY	HAVANA	exon	38605682	38606377	.	+	.	gene_id "ENSMUSG00000100699.1"; transcript_id "ENSMUST00000189913.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21765"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21765-201"; exon_number 1; exon_id "ENSMUSE00001325049.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047646.1"; havana_transcript "OTTMUST00000122815.1";
mm10-chrY	HAVANA	gene	38619783	38620784	.	+	.	gene_id "ENSMUSG00000096438.3"; gene_type "processed_pseudogene"; gene_name "Gapdh-ps15"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000042573.1";
mm10-chrY	HAVANA	transcript	38619783	38620784	.	+	.	gene_id "ENSMUSG00000096438.3"; transcript_id "ENSMUST00000180966.1"; gene_type "processed_pseudogene"; gene_name "Gapdh-ps15"; transcript_type "processed_pseudogene"; transcript_name "Gapdh-ps15-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000042573.1"; havana_transcript "OTTMUST00000112220.1";
mm10-chrY	HAVANA	exon	38619783	38620784	.	+	.	gene_id "ENSMUSG00000096438.3"; transcript_id "ENSMUST00000180966.1"; gene_type "processed_pseudogene"; gene_name "Gapdh-ps15"; transcript_type "processed_pseudogene"; transcript_name "Gapdh-ps15-201"; exon_number 1; exon_id "ENSMUSE00001140753.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000042573.1"; havana_transcript "OTTMUST00000112220.1";
mm10-chrY	HAVANA	gene	38643836	38644450	.	+	.	gene_id "ENSMUSG00000099351.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28776"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047647.1";
mm10-chrY	HAVANA	transcript	38643836	38644450	.	+	.	gene_id "ENSMUSG00000099351.1"; transcript_id "ENSMUST00000191282.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28776"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28776-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047647.1"; havana_transcript "OTTMUST00000122816.1";
mm10-chrY	HAVANA	exon	38643836	38644450	.	+	.	gene_id "ENSMUSG00000099351.1"; transcript_id "ENSMUST00000191282.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28776"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28776-201"; exon_number 1; exon_id "ENSMUSE00001327533.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047647.1"; havana_transcript "OTTMUST00000122816.1";
mm10-chrY	HAVANA	gene	38673331	38674023	.	+	.	gene_id "ENSMUSG00000099489.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21787"; level 2; havana_gene "OTTMUSG00000047648.1";
mm10-chrY	HAVANA	transcript	38673331	38674023	.	+	.	gene_id "ENSMUSG00000099489.1"; transcript_id "ENSMUST00000189993.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21787"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21787-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047648.1"; havana_transcript "OTTMUST00000122817.1";
mm10-chrY	HAVANA	exon	38673331	38674023	.	+	.	gene_id "ENSMUSG00000099489.1"; transcript_id "ENSMUST00000189993.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21787"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21787-201"; exon_number 1; exon_id "ENSMUSE00001333997.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047648.1"; havana_transcript "OTTMUST00000122817.1";
mm10-chrY	HAVANA	gene	38747648	38748340	.	+	.	gene_id "ENSMUSG00000100845.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28770"; level 2; havana_gene "OTTMUSG00000047649.1";
mm10-chrY	HAVANA	transcript	38747648	38748340	.	+	.	gene_id "ENSMUSG00000100845.1"; transcript_id "ENSMUST00000187354.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28770"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28770-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047649.1"; havana_transcript "OTTMUST00000122818.1";
mm10-chrY	HAVANA	exon	38747648	38748340	.	+	.	gene_id "ENSMUSG00000100845.1"; transcript_id "ENSMUST00000187354.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28770"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28770-201"; exon_number 1; exon_id "ENSMUSE00001319802.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047649.1"; havana_transcript "OTTMUST00000122818.1";
mm10-chrY	HAVANA	gene	38774934	38799361	.	-	.	gene_id "ENSMUSG00000096275.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20901"; level 2; havana_gene "OTTMUSG00000047650.1";
mm10-chrY	HAVANA	transcript	38774934	38799361	.	-	.	gene_id "ENSMUSG00000096275.2"; transcript_id "ENSMUST00000180177.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20901-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047650.1"; havana_transcript "OTTMUST00000122819.1";
mm10-chrY	HAVANA	exon	38799244	38799361	.	-	.	gene_id "ENSMUSG00000096275.2"; transcript_id "ENSMUST00000180177.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20901-201"; exon_number 1; exon_id "ENSMUSE00001063363.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047650.1"; havana_transcript "OTTMUST00000122819.1";
mm10-chrY	HAVANA	exon	38793872	38793938	.	-	.	gene_id "ENSMUSG00000096275.2"; transcript_id "ENSMUST00000180177.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20901-201"; exon_number 2; exon_id "ENSMUSE00001086254.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047650.1"; havana_transcript "OTTMUST00000122819.1";
mm10-chrY	HAVANA	exon	38793238	38793272	.	-	.	gene_id "ENSMUSG00000096275.2"; transcript_id "ENSMUST00000180177.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20901-201"; exon_number 3; exon_id "ENSMUSE00001080880.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047650.1"; havana_transcript "OTTMUST00000122819.1";
mm10-chrY	HAVANA	exon	38786172	38786238	.	-	.	gene_id "ENSMUSG00000096275.2"; transcript_id "ENSMUST00000180177.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20901-201"; exon_number 4; exon_id "ENSMUSE00001325096.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047650.1"; havana_transcript "OTTMUST00000122819.1";
mm10-chrY	HAVANA	exon	38785576	38785610	.	-	.	gene_id "ENSMUSG00000096275.2"; transcript_id "ENSMUST00000180177.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20901-201"; exon_number 5; exon_id "ENSMUSE00001325416.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047650.1"; havana_transcript "OTTMUST00000122819.1";
mm10-chrY	HAVANA	exon	38778304	38778421	.	-	.	gene_id "ENSMUSG00000096275.2"; transcript_id "ENSMUST00000180177.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20901-201"; exon_number 6; exon_id "ENSMUSE00000980339.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047650.1"; havana_transcript "OTTMUST00000122819.1";
mm10-chrY	HAVANA	exon	38777448	38777547	.	-	.	gene_id "ENSMUSG00000096275.2"; transcript_id "ENSMUST00000180177.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20901-201"; exon_number 7; exon_id "ENSMUSE00001091016.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047650.1"; havana_transcript "OTTMUST00000122819.1";
mm10-chrY	HAVANA	exon	38775320	38775416	.	-	.	gene_id "ENSMUSG00000096275.2"; transcript_id "ENSMUST00000180177.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20901-201"; exon_number 8; exon_id "ENSMUSE00000985281.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047650.1"; havana_transcript "OTTMUST00000122819.1";
mm10-chrY	HAVANA	exon	38774934	38774960	.	-	.	gene_id "ENSMUSG00000096275.2"; transcript_id "ENSMUST00000180177.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20901-201"; exon_number 9; exon_id "ENSMUSE00001320466.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047650.1"; havana_transcript "OTTMUST00000122819.1";
mm10-chrY	HAVANA	gene	38872635	38874998	.	-	.	gene_id "ENSMUSG00000101771.6"; gene_type "lincRNA"; gene_name "Gm28176"; level 2; havana_gene "OTTMUSG00000047651.1";
mm10-chrY	HAVANA	transcript	38872635	38874998	.	-	.	gene_id "ENSMUSG00000101771.6"; transcript_id "ENSMUST00000185322.6"; gene_type "lincRNA"; gene_name "Gm28176"; transcript_type "lincRNA"; transcript_name "Gm28176-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047651.1"; havana_transcript "OTTMUST00000122820.1";
mm10-chrY	HAVANA	exon	38874813	38874998	.	-	.	gene_id "ENSMUSG00000101771.6"; transcript_id "ENSMUST00000185322.6"; gene_type "lincRNA"; gene_name "Gm28176"; transcript_type "lincRNA"; transcript_name "Gm28176-201"; exon_number 1; exon_id "ENSMUSE00001335086.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047651.1"; havana_transcript "OTTMUST00000122820.1";
mm10-chrY	HAVANA	exon	38874144	38874325	.	-	.	gene_id "ENSMUSG00000101771.6"; transcript_id "ENSMUST00000185322.6"; gene_type "lincRNA"; gene_name "Gm28176"; transcript_type "lincRNA"; transcript_name "Gm28176-201"; exon_number 2; exon_id "ENSMUSE00001327963.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047651.1"; havana_transcript "OTTMUST00000122820.1";
mm10-chrY	HAVANA	exon	38873232	38873416	.	-	.	gene_id "ENSMUSG00000101771.6"; transcript_id "ENSMUST00000185322.6"; gene_type "lincRNA"; gene_name "Gm28176"; transcript_type "lincRNA"; transcript_name "Gm28176-201"; exon_number 3; exon_id "ENSMUSE00001321752.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047651.1"; havana_transcript "OTTMUST00000122820.1";
mm10-chrY	HAVANA	exon	38872635	38872703	.	-	.	gene_id "ENSMUSG00000101771.6"; transcript_id "ENSMUST00000185322.6"; gene_type "lincRNA"; gene_name "Gm28176"; transcript_type "lincRNA"; transcript_name "Gm28176-201"; exon_number 4; exon_id "ENSMUSE00001333873.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047651.1"; havana_transcript "OTTMUST00000122820.1";
mm10-chrY	HAVANA	transcript	38872635	38874998	.	-	.	gene_id "ENSMUSG00000101771.6"; transcript_id "ENSMUST00000185740.1"; gene_type "lincRNA"; gene_name "Gm28176"; transcript_type "lincRNA"; transcript_name "Gm28176-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047651.1"; havana_transcript "OTTMUST00000122821.1";
mm10-chrY	HAVANA	exon	38874813	38874998	.	-	.	gene_id "ENSMUSG00000101771.6"; transcript_id "ENSMUST00000185740.1"; gene_type "lincRNA"; gene_name "Gm28176"; transcript_type "lincRNA"; transcript_name "Gm28176-202"; exon_number 1; exon_id "ENSMUSE00001335086.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047651.1"; havana_transcript "OTTMUST00000122821.1";
mm10-chrY	HAVANA	exon	38874144	38874325	.	-	.	gene_id "ENSMUSG00000101771.6"; transcript_id "ENSMUST00000185740.1"; gene_type "lincRNA"; gene_name "Gm28176"; transcript_type "lincRNA"; transcript_name "Gm28176-202"; exon_number 2; exon_id "ENSMUSE00001327963.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047651.1"; havana_transcript "OTTMUST00000122821.1";
mm10-chrY	HAVANA	exon	38872635	38872703	.	-	.	gene_id "ENSMUSG00000101771.6"; transcript_id "ENSMUST00000185740.1"; gene_type "lincRNA"; gene_name "Gm28176"; transcript_type "lincRNA"; transcript_name "Gm28176-202"; exon_number 3; exon_id "ENSMUSE00001333873.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047651.1"; havana_transcript "OTTMUST00000122821.1";
mm10-chrY	HAVANA	gene	38897393	38897918	.	-	.	gene_id "ENSMUSG00000100719.1"; gene_type "lincRNA"; gene_name "Gm28786"; level 2; havana_gene "OTTMUSG00000047652.1";
mm10-chrY	HAVANA	transcript	38897393	38897918	.	-	.	gene_id "ENSMUSG00000100719.1"; transcript_id "ENSMUST00000187228.1"; gene_type "lincRNA"; gene_name "Gm28786"; transcript_type "lincRNA"; transcript_name "Gm28786-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047652.1"; havana_transcript "OTTMUST00000122822.1";
mm10-chrY	HAVANA	exon	38897816	38897918	.	-	.	gene_id "ENSMUSG00000100719.1"; transcript_id "ENSMUST00000187228.1"; gene_type "lincRNA"; gene_name "Gm28786"; transcript_type "lincRNA"; transcript_name "Gm28786-201"; exon_number 1; exon_id "ENSMUSE00001329549.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047652.1"; havana_transcript "OTTMUST00000122822.1";
mm10-chrY	HAVANA	exon	38897393	38897461	.	-	.	gene_id "ENSMUSG00000100719.1"; transcript_id "ENSMUST00000187228.1"; gene_type "lincRNA"; gene_name "Gm28786"; transcript_type "lincRNA"; transcript_name "Gm28786-201"; exon_number 2; exon_id "ENSMUSE00001333668.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047652.1"; havana_transcript "OTTMUST00000122822.1";
mm10-chrY	HAVANA	gene	38935104	38937383	.	-	.	gene_id "ENSMUSG00000101740.6"; gene_type "lincRNA"; gene_name "Gm29360"; level 2; havana_gene "OTTMUSG00000047679.1";
mm10-chrY	HAVANA	transcript	38935104	38937383	.	-	.	gene_id "ENSMUSG00000101740.6"; transcript_id "ENSMUST00000185625.6"; gene_type "lincRNA"; gene_name "Gm29360"; transcript_type "lincRNA"; transcript_name "Gm29360-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047679.1"; havana_transcript "OTTMUST00000122870.1";
mm10-chrY	HAVANA	exon	38937283	38937383	.	-	.	gene_id "ENSMUSG00000101740.6"; transcript_id "ENSMUST00000185625.6"; gene_type "lincRNA"; gene_name "Gm29360"; transcript_type "lincRNA"; transcript_name "Gm29360-201"; exon_number 1; exon_id "ENSMUSE00001318410.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047679.1"; havana_transcript "OTTMUST00000122870.1";
mm10-chrY	HAVANA	exon	38936614	38936795	.	-	.	gene_id "ENSMUSG00000101740.6"; transcript_id "ENSMUST00000185625.6"; gene_type "lincRNA"; gene_name "Gm29360"; transcript_type "lincRNA"; transcript_name "Gm29360-201"; exon_number 2; exon_id "ENSMUSE00001323208.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047679.1"; havana_transcript "OTTMUST00000122870.1";
mm10-chrY	HAVANA	exon	38935701	38935885	.	-	.	gene_id "ENSMUSG00000101740.6"; transcript_id "ENSMUST00000185625.6"; gene_type "lincRNA"; gene_name "Gm29360"; transcript_type "lincRNA"; transcript_name "Gm29360-201"; exon_number 3; exon_id "ENSMUSE00001332067.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047679.1"; havana_transcript "OTTMUST00000122870.1";
mm10-chrY	HAVANA	exon	38935104	38935172	.	-	.	gene_id "ENSMUSG00000101740.6"; transcript_id "ENSMUST00000185625.6"; gene_type "lincRNA"; gene_name "Gm29360"; transcript_type "lincRNA"; transcript_name "Gm29360-201"; exon_number 4; exon_id "ENSMUSE00001333726.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047679.1"; havana_transcript "OTTMUST00000122870.1";
mm10-chrY	HAVANA	transcript	38935104	38937383	.	-	.	gene_id "ENSMUSG00000101740.6"; transcript_id "ENSMUST00000191555.1"; gene_type "lincRNA"; gene_name "Gm29360"; transcript_type "lincRNA"; transcript_name "Gm29360-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047679.1"; havana_transcript "OTTMUST00000122871.1";
mm10-chrY	HAVANA	exon	38937283	38937383	.	-	.	gene_id "ENSMUSG00000101740.6"; transcript_id "ENSMUST00000191555.1"; gene_type "lincRNA"; gene_name "Gm29360"; transcript_type "lincRNA"; transcript_name "Gm29360-202"; exon_number 1; exon_id "ENSMUSE00001318410.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047679.1"; havana_transcript "OTTMUST00000122871.1";
mm10-chrY	HAVANA	exon	38936614	38936795	.	-	.	gene_id "ENSMUSG00000101740.6"; transcript_id "ENSMUST00000191555.1"; gene_type "lincRNA"; gene_name "Gm29360"; transcript_type "lincRNA"; transcript_name "Gm29360-202"; exon_number 2; exon_id "ENSMUSE00001323208.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047679.1"; havana_transcript "OTTMUST00000122871.1";
mm10-chrY	HAVANA	exon	38935104	38935172	.	-	.	gene_id "ENSMUSG00000101740.6"; transcript_id "ENSMUST00000191555.1"; gene_type "lincRNA"; gene_name "Gm29360"; transcript_type "lincRNA"; transcript_name "Gm29360-202"; exon_number 3; exon_id "ENSMUSE00001333726.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047679.1"; havana_transcript "OTTMUST00000122871.1";
mm10-chrY	HAVANA	gene	39078390	39079082	.	+	.	gene_id "ENSMUSG00000101292.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29496"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047680.1";
mm10-chrY	HAVANA	transcript	39078390	39079082	.	+	.	gene_id "ENSMUSG00000101292.1"; transcript_id "ENSMUST00000189854.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29496"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29496-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047680.1"; havana_transcript "OTTMUST00000122872.1";
mm10-chrY	HAVANA	exon	39078390	39079082	.	+	.	gene_id "ENSMUSG00000101292.1"; transcript_id "ENSMUST00000189854.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29496"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29496-201"; exon_number 1; exon_id "ENSMUSE00001329474.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047680.1"; havana_transcript "OTTMUST00000122872.1";
mm10-chrY	HAVANA	gene	39158848	39162080	.	-	.	gene_id "ENSMUSG00000100588.1"; gene_type "lincRNA"; gene_name "Gm29497"; level 2; havana_gene "OTTMUSG00000047681.1";
mm10-chrY	HAVANA	transcript	39158848	39162080	.	-	.	gene_id "ENSMUSG00000100588.1"; transcript_id "ENSMUST00000186801.1"; gene_type "lincRNA"; gene_name "Gm29497"; transcript_type "lincRNA"; transcript_name "Gm29497-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047681.1"; havana_transcript "OTTMUST00000122873.1";
mm10-chrY	HAVANA	exon	39161442	39162080	.	-	.	gene_id "ENSMUSG00000100588.1"; transcript_id "ENSMUST00000186801.1"; gene_type "lincRNA"; gene_name "Gm29497"; transcript_type "lincRNA"; transcript_name "Gm29497-201"; exon_number 1; exon_id "ENSMUSE00001318610.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047681.1"; havana_transcript "OTTMUST00000122873.1";
mm10-chrY	HAVANA	exon	39160773	39160958	.	-	.	gene_id "ENSMUSG00000100588.1"; transcript_id "ENSMUST00000186801.1"; gene_type "lincRNA"; gene_name "Gm29497"; transcript_type "lincRNA"; transcript_name "Gm29497-201"; exon_number 2; exon_id "ENSMUSE00001332499.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047681.1"; havana_transcript "OTTMUST00000122873.1";
mm10-chrY	HAVANA	exon	39159864	39160047	.	-	.	gene_id "ENSMUSG00000100588.1"; transcript_id "ENSMUST00000186801.1"; gene_type "lincRNA"; gene_name "Gm29497"; transcript_type "lincRNA"; transcript_name "Gm29497-201"; exon_number 3; exon_id "ENSMUSE00001335838.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047681.1"; havana_transcript "OTTMUST00000122873.1";
mm10-chrY	HAVANA	exon	39158848	39159336	.	-	.	gene_id "ENSMUSG00000100588.1"; transcript_id "ENSMUST00000186801.1"; gene_type "lincRNA"; gene_name "Gm29497"; transcript_type "lincRNA"; transcript_name "Gm29497-201"; exon_number 4; exon_id "ENSMUSE00001322156.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047681.1"; havana_transcript "OTTMUST00000122873.1";
mm10-chrY	HAVANA	transcript	39159268	39161627	.	-	.	gene_id "ENSMUSG00000100588.1"; transcript_id "ENSMUST00000189149.1"; gene_type "lincRNA"; gene_name "Gm29497"; transcript_type "lincRNA"; transcript_name "Gm29497-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047681.1"; havana_transcript "OTTMUST00000122874.1";
mm10-chrY	HAVANA	exon	39161442	39161627	.	-	.	gene_id "ENSMUSG00000100588.1"; transcript_id "ENSMUST00000189149.1"; gene_type "lincRNA"; gene_name "Gm29497"; transcript_type "lincRNA"; transcript_name "Gm29497-202"; exon_number 1; exon_id "ENSMUSE00001331917.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047681.1"; havana_transcript "OTTMUST00000122874.1";
mm10-chrY	HAVANA	exon	39160773	39160954	.	-	.	gene_id "ENSMUSG00000100588.1"; transcript_id "ENSMUST00000189149.1"; gene_type "lincRNA"; gene_name "Gm29497"; transcript_type "lincRNA"; transcript_name "Gm29497-202"; exon_number 2; exon_id "ENSMUSE00001325965.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047681.1"; havana_transcript "OTTMUST00000122874.1";
mm10-chrY	HAVANA	exon	39159268	39159336	.	-	.	gene_id "ENSMUSG00000100588.1"; transcript_id "ENSMUST00000189149.1"; gene_type "lincRNA"; gene_name "Gm29497"; transcript_type "lincRNA"; transcript_name "Gm29497-202"; exon_number 3; exon_id "ENSMUSE00001335812.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047681.1"; havana_transcript "OTTMUST00000122874.1";
mm10-chrY	HAVANA	gene	39344545	39345030	.	-	.	gene_id "ENSMUSG00000102050.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29499"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047688.1";
mm10-chrY	HAVANA	transcript	39344545	39345030	.	-	.	gene_id "ENSMUSG00000102050.1"; transcript_id "ENSMUST00000189151.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29499"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29499-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047688.1"; havana_transcript "OTTMUST00000122887.1";
mm10-chrY	HAVANA	exon	39344545	39345030	.	-	.	gene_id "ENSMUSG00000102050.1"; transcript_id "ENSMUST00000189151.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29499"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29499-201"; exon_number 1; exon_id "ENSMUSE00001333776.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047688.1"; havana_transcript "OTTMUST00000122887.1";
mm10-chrY	HAVANA	gene	39411821	39414100	.	+	.	gene_id "ENSMUSG00000101040.6"; gene_type "lincRNA"; gene_name "Gm29498"; level 2; havana_gene "OTTMUSG00000047682.1";
mm10-chrY	HAVANA	transcript	39411821	39414100	.	+	.	gene_id "ENSMUSG00000101040.6"; transcript_id "ENSMUST00000186449.6"; gene_type "lincRNA"; gene_name "Gm29498"; transcript_type "lincRNA"; transcript_name "Gm29498-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047682.1"; havana_transcript "OTTMUST00000122875.1";
mm10-chrY	HAVANA	exon	39411821	39411921	.	+	.	gene_id "ENSMUSG00000101040.6"; transcript_id "ENSMUST00000186449.6"; gene_type "lincRNA"; gene_name "Gm29498"; transcript_type "lincRNA"; transcript_name "Gm29498-201"; exon_number 1; exon_id "ENSMUSE00001333603.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047682.1"; havana_transcript "OTTMUST00000122875.1";
mm10-chrY	HAVANA	exon	39412409	39412590	.	+	.	gene_id "ENSMUSG00000101040.6"; transcript_id "ENSMUST00000186449.6"; gene_type "lincRNA"; gene_name "Gm29498"; transcript_type "lincRNA"; transcript_name "Gm29498-201"; exon_number 2; exon_id "ENSMUSE00001319180.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047682.1"; havana_transcript "OTTMUST00000122875.1";
mm10-chrY	HAVANA	exon	39413319	39413503	.	+	.	gene_id "ENSMUSG00000101040.6"; transcript_id "ENSMUST00000186449.6"; gene_type "lincRNA"; gene_name "Gm29498"; transcript_type "lincRNA"; transcript_name "Gm29498-201"; exon_number 3; exon_id "ENSMUSE00001326089.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047682.1"; havana_transcript "OTTMUST00000122875.1";
mm10-chrY	HAVANA	exon	39414032	39414100	.	+	.	gene_id "ENSMUSG00000101040.6"; transcript_id "ENSMUST00000186449.6"; gene_type "lincRNA"; gene_name "Gm29498"; transcript_type "lincRNA"; transcript_name "Gm29498-201"; exon_number 4; exon_id "ENSMUSE00001331486.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047682.1"; havana_transcript "OTTMUST00000122875.1";
mm10-chrY	HAVANA	transcript	39411821	39414100	.	+	.	gene_id "ENSMUSG00000101040.6"; transcript_id "ENSMUST00000188911.1"; gene_type "lincRNA"; gene_name "Gm29498"; transcript_type "lincRNA"; transcript_name "Gm29498-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047682.1"; havana_transcript "OTTMUST00000122876.1";
mm10-chrY	HAVANA	exon	39411821	39411921	.	+	.	gene_id "ENSMUSG00000101040.6"; transcript_id "ENSMUST00000188911.1"; gene_type "lincRNA"; gene_name "Gm29498"; transcript_type "lincRNA"; transcript_name "Gm29498-202"; exon_number 1; exon_id "ENSMUSE00001333603.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047682.1"; havana_transcript "OTTMUST00000122876.1";
mm10-chrY	HAVANA	exon	39412409	39412590	.	+	.	gene_id "ENSMUSG00000101040.6"; transcript_id "ENSMUST00000188911.1"; gene_type "lincRNA"; gene_name "Gm29498"; transcript_type "lincRNA"; transcript_name "Gm29498-202"; exon_number 2; exon_id "ENSMUSE00001319180.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047682.1"; havana_transcript "OTTMUST00000122876.1";
mm10-chrY	HAVANA	exon	39414032	39414100	.	+	.	gene_id "ENSMUSG00000101040.6"; transcript_id "ENSMUST00000188911.1"; gene_type "lincRNA"; gene_name "Gm29498"; transcript_type "lincRNA"; transcript_name "Gm29498-202"; exon_number 3; exon_id "ENSMUSE00001331486.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047682.1"; havana_transcript "OTTMUST00000122876.1";
mm10-chrY	HAVANA	gene	39451243	39451740	.	+	.	gene_id "ENSMUSG00000101272.1"; gene_type "lincRNA"; gene_name "Gm36782"; level 2; havana_gene "OTTMUSG00000047684.1";
mm10-chrY	HAVANA	transcript	39451243	39451740	.	+	.	gene_id "ENSMUSG00000101272.1"; transcript_id "ENSMUST00000189459.1"; gene_type "lincRNA"; gene_name "Gm36782"; transcript_type "lincRNA"; transcript_name "Gm36782-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047684.1"; havana_transcript "OTTMUST00000122879.1";
mm10-chrY	HAVANA	exon	39451243	39451347	.	+	.	gene_id "ENSMUSG00000101272.1"; transcript_id "ENSMUST00000189459.1"; gene_type "lincRNA"; gene_name "Gm36782"; transcript_type "lincRNA"; transcript_name "Gm36782-201"; exon_number 1; exon_id "ENSMUSE00001334573.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047684.1"; havana_transcript "OTTMUST00000122879.1";
mm10-chrY	HAVANA	exon	39451672	39451740	.	+	.	gene_id "ENSMUSG00000101272.1"; transcript_id "ENSMUST00000189459.1"; gene_type "lincRNA"; gene_name "Gm36782"; transcript_type "lincRNA"; transcript_name "Gm36782-201"; exon_number 2; exon_id "ENSMUSE00001328220.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047684.1"; havana_transcript "OTTMUST00000122879.1";
mm10-chrY	HAVANA	gene	39504127	39504624	.	+	.	gene_id "ENSMUSG00000101633.1"; gene_type "lincRNA"; gene_name "Gm29839"; level 2; havana_gene "OTTMUSG00000047685.1";
mm10-chrY	HAVANA	transcript	39504127	39504624	.	+	.	gene_id "ENSMUSG00000101633.1"; transcript_id "ENSMUST00000187045.1"; gene_type "lincRNA"; gene_name "Gm29839"; transcript_type "lincRNA"; transcript_name "Gm29839-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047685.1"; havana_transcript "OTTMUST00000122880.1";
mm10-chrY	HAVANA	exon	39504127	39504231	.	+	.	gene_id "ENSMUSG00000101633.1"; transcript_id "ENSMUST00000187045.1"; gene_type "lincRNA"; gene_name "Gm29839"; transcript_type "lincRNA"; transcript_name "Gm29839-201"; exon_number 1; exon_id "ENSMUSE00001329707.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047685.1"; havana_transcript "OTTMUST00000122880.1";
mm10-chrY	HAVANA	exon	39504556	39504624	.	+	.	gene_id "ENSMUSG00000101633.1"; transcript_id "ENSMUST00000187045.1"; gene_type "lincRNA"; gene_name "Gm29839"; transcript_type "lincRNA"; transcript_name "Gm29839-201"; exon_number 2; exon_id "ENSMUSE00001332972.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047685.1"; havana_transcript "OTTMUST00000122880.1";
mm10-chrY	HAVANA	gene	39589769	39614199	.	+	.	gene_id "ENSMUSG00000101727.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29495"; level 2; havana_gene "OTTMUSG00000047686.1";
mm10-chrY	HAVANA	transcript	39589769	39614199	.	+	.	gene_id "ENSMUSG00000101727.1"; transcript_id "ENSMUST00000189319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29495"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29495-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047686.1"; havana_transcript "OTTMUST00000122881.1";
mm10-chrY	HAVANA	exon	39589769	39589886	.	+	.	gene_id "ENSMUSG00000101727.1"; transcript_id "ENSMUST00000189319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29495"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29495-201"; exon_number 1; exon_id "ENSMUSE00001323311.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047686.1"; havana_transcript "OTTMUST00000122881.1";
mm10-chrY	HAVANA	exon	39595200	39595266	.	+	.	gene_id "ENSMUSG00000101727.1"; transcript_id "ENSMUST00000189319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29495"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29495-201"; exon_number 2; exon_id "ENSMUSE00001322592.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047686.1"; havana_transcript "OTTMUST00000122881.1";
mm10-chrY	HAVANA	exon	39595826	39595860	.	+	.	gene_id "ENSMUSG00000101727.1"; transcript_id "ENSMUST00000189319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29495"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29495-201"; exon_number 3; exon_id "ENSMUSE00001329783.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047686.1"; havana_transcript "OTTMUST00000122881.1";
mm10-chrY	HAVANA	exon	39602890	39602956	.	+	.	gene_id "ENSMUSG00000101727.1"; transcript_id "ENSMUST00000189319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29495"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29495-201"; exon_number 4; exon_id "ENSMUSE00001328860.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047686.1"; havana_transcript "OTTMUST00000122881.1";
mm10-chrY	HAVANA	exon	39603516	39603550	.	+	.	gene_id "ENSMUSG00000101727.1"; transcript_id "ENSMUST00000189319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29495"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29495-201"; exon_number 5; exon_id "ENSMUSE00001331429.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047686.1"; havana_transcript "OTTMUST00000122881.1";
mm10-chrY	HAVANA	exon	39610709	39610826	.	+	.	gene_id "ENSMUSG00000101727.1"; transcript_id "ENSMUST00000189319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29495"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29495-201"; exon_number 6; exon_id "ENSMUSE00001319185.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047686.1"; havana_transcript "OTTMUST00000122881.1";
mm10-chrY	HAVANA	exon	39611583	39611682	.	+	.	gene_id "ENSMUSG00000101727.1"; transcript_id "ENSMUST00000189319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29495"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29495-201"; exon_number 7; exon_id "ENSMUSE00001324002.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047686.1"; havana_transcript "OTTMUST00000122881.1";
mm10-chrY	HAVANA	exon	39613717	39613813	.	+	.	gene_id "ENSMUSG00000101727.1"; transcript_id "ENSMUST00000189319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29495"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29495-201"; exon_number 8; exon_id "ENSMUSE00001331615.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047686.1"; havana_transcript "OTTMUST00000122881.1";
mm10-chrY	HAVANA	exon	39614173	39614199	.	+	.	gene_id "ENSMUSG00000101727.1"; transcript_id "ENSMUST00000189319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29495"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29495-201"; exon_number 9; exon_id "ENSMUSE00001318368.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047686.1"; havana_transcript "OTTMUST00000122881.1";
mm10-chrY	HAVANA	gene	39988287	39988981	.	-	.	gene_id "ENSMUSG00000101124.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28371"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047736.1";
mm10-chrY	HAVANA	transcript	39988287	39988981	.	-	.	gene_id "ENSMUSG00000101124.1"; transcript_id "ENSMUST00000186936.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28371"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28371-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047736.1"; havana_transcript "OTTMUST00000122951.1";
mm10-chrY	HAVANA	exon	39988287	39988981	.	-	.	gene_id "ENSMUSG00000101124.1"; transcript_id "ENSMUST00000186936.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28371"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28371-201"; exon_number 1; exon_id "ENSMUSE00001335834.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047736.1"; havana_transcript "OTTMUST00000122951.1";
mm10-chrY	HAVANA	gene	40104656	40112547	.	+	.	gene_id "ENSMUSG00000099723.1"; gene_type "lincRNA"; gene_name "Gm28595"; level 2; havana_gene "OTTMUSG00000047737.1";
mm10-chrY	HAVANA	transcript	40104656	40112547	.	+	.	gene_id "ENSMUSG00000099723.1"; transcript_id "ENSMUST00000186223.1"; gene_type "lincRNA"; gene_name "Gm28595"; transcript_type "lincRNA"; transcript_name "Gm28595-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047737.1"; havana_transcript "OTTMUST00000122952.1";
mm10-chrY	HAVANA	exon	40104656	40104841	.	+	.	gene_id "ENSMUSG00000099723.1"; transcript_id "ENSMUST00000186223.1"; gene_type "lincRNA"; gene_name "Gm28595"; transcript_type "lincRNA"; transcript_name "Gm28595-201"; exon_number 1; exon_id "ENSMUSE00001318747.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047737.1"; havana_transcript "OTTMUST00000122952.1";
mm10-chrY	HAVANA	exon	40105329	40105510	.	+	.	gene_id "ENSMUSG00000099723.1"; transcript_id "ENSMUST00000186223.1"; gene_type "lincRNA"; gene_name "Gm28595"; transcript_type "lincRNA"; transcript_name "Gm28595-201"; exon_number 2; exon_id "ENSMUSE00001330770.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047737.1"; havana_transcript "OTTMUST00000122952.1";
mm10-chrY	HAVANA	exon	40112479	40112547	.	+	.	gene_id "ENSMUSG00000099723.1"; transcript_id "ENSMUST00000186223.1"; gene_type "lincRNA"; gene_name "Gm28595"; transcript_type "lincRNA"; transcript_name "Gm28595-201"; exon_number 3; exon_id "ENSMUSE00001327487.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047737.1"; havana_transcript "OTTMUST00000122952.1";
mm10-chrY	HAVANA	gene	40188895	40191869	.	+	.	gene_id "ENSMUSG00000104381.1"; gene_type "TEC"; gene_name "Gm37032"; level 2; havana_gene "OTTMUSG00000046800.1";
mm10-chrY	HAVANA	transcript	40188895	40191869	.	+	.	gene_id "ENSMUSG00000104381.1"; transcript_id "ENSMUST00000194882.1"; gene_type "TEC"; gene_name "Gm37032"; transcript_type "TEC"; transcript_name "Gm37032-201"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046800.1"; havana_transcript "OTTMUST00000121433.1";
mm10-chrY	HAVANA	exon	40188895	40191869	.	+	.	gene_id "ENSMUSG00000104381.1"; transcript_id "ENSMUST00000194882.1"; gene_type "TEC"; gene_name "Gm37032"; transcript_type "TEC"; transcript_name "Gm37032-201"; exon_number 1; exon_id "ENSMUSE00001342478.1"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046800.1"; havana_transcript "OTTMUST00000121433.1";
mm10-chrY	HAVANA	gene	40290790	40316903	.	-	.	gene_id "ENSMUSG00000093895.7"; gene_type "protein_coding"; gene_name "Gm21865"; level 2; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	HAVANA	transcript	40290790	40316903	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	exon	40316860	40316903	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 1; exon_id "ENSMUSE00001326585.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	exon	40315343	40315474	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 2; exon_id "ENSMUSE00001328993.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	CDS	40315343	40315460	.	-	0	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 2; exon_id "ENSMUSE00001328993.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	start_codon	40315458	40315460	.	-	0	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 2; exon_id "ENSMUSE00001328993.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	exon	40309961	40310027	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 3; exon_id "ENSMUSE00001010026.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	CDS	40309961	40310027	.	-	2	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 3; exon_id "ENSMUSE00001010026.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	exon	40309372	40309406	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 4; exon_id "ENSMUSE00001070098.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	CDS	40309372	40309406	.	-	1	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 4; exon_id "ENSMUSE00001070098.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	exon	40302249	40302315	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 5; exon_id "ENSMUSE00000983126.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	CDS	40302249	40302315	.	-	2	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 5; exon_id "ENSMUSE00000983126.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	exon	40301651	40301685	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 6; exon_id "ENSMUSE00001039334.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	CDS	40301651	40301685	.	-	1	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 6; exon_id "ENSMUSE00001039334.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	exon	40294368	40294485	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 7; exon_id "ENSMUSE00000980533.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	CDS	40294368	40294485	.	-	2	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 7; exon_id "ENSMUSE00000980533.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	exon	40293505	40293604	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 8; exon_id "ENSMUSE00001332622.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	CDS	40293505	40293604	.	-	1	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 8; exon_id "ENSMUSE00001332622.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	exon	40291375	40291473	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 9; exon_id "ENSMUSE00001332859.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	CDS	40291375	40291473	.	-	0	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 9; exon_id "ENSMUSE00001332859.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	exon	40290790	40291015	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 10; exon_id "ENSMUSE00001323096.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	CDS	40290989	40291015	.	-	0	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 10; exon_id "ENSMUSE00001323096.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	stop_codon	40290986	40290988	.	-	0	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 10; exon_id "ENSMUSE00001323096.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	UTR	40316860	40316903	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 1; exon_id "ENSMUSE00001326585.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	UTR	40315461	40315474	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 2; exon_id "ENSMUSE00001328993.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	HAVANA	UTR	40290790	40290988	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000191443.6"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-202"; exon_number 10; exon_id "ENSMUSE00001323096.1"; level 2; protein_id "ENSMUSP00000140679.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047738.1"; havana_transcript "OTTMUST00000122953.1";
mm10-chrY	ENSEMBL	transcript	40293538	40315451	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	exon	40315343	40315451	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 1; exon_id "ENSMUSE00001092157.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	CDS	40315343	40315451	.	-	0	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 1; exon_id "ENSMUSE00001092157.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	start_codon	40315449	40315451	.	-	0	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 1; exon_id "ENSMUSE00001092157.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	exon	40309961	40310027	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 2; exon_id "ENSMUSE00001010026.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	CDS	40309961	40310027	.	-	2	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 2; exon_id "ENSMUSE00001010026.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	exon	40309372	40309406	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 3; exon_id "ENSMUSE00001070098.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	CDS	40309372	40309406	.	-	1	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 3; exon_id "ENSMUSE00001070098.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	exon	40302249	40302315	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 4; exon_id "ENSMUSE00000983126.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	CDS	40302249	40302315	.	-	2	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 4; exon_id "ENSMUSE00000983126.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	exon	40301651	40301685	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 5; exon_id "ENSMUSE00001039334.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	CDS	40301651	40301685	.	-	1	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 5; exon_id "ENSMUSE00001039334.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	exon	40294368	40294485	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 6; exon_id "ENSMUSE00000980533.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	CDS	40294368	40294485	.	-	2	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 6; exon_id "ENSMUSE00000980533.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	exon	40293538	40293604	.	-	.	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 7; exon_id "ENSMUSE00000969619.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	ENSEMBL	CDS	40293538	40293604	.	-	1	gene_id "ENSMUSG00000093895.7"; transcript_id "ENSMUST00000177713.1"; gene_type "protein_coding"; gene_name "Gm21865"; transcript_type "protein_coding"; transcript_name "Gm21865-201"; exon_number 7; exon_id "ENSMUSE00000969619.1"; level 3; protein_id "ENSMUSP00000136800.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047738.1";
mm10-chrY	HAVANA	gene	40367506	40372751	.	+	.	gene_id "ENSMUSG00000100043.1"; gene_type "lincRNA"; gene_name "Gm29433"; level 2; havana_gene "OTTMUSG00000047739.1";
mm10-chrY	HAVANA	transcript	40367506	40372751	.	+	.	gene_id "ENSMUSG00000100043.1"; transcript_id "ENSMUST00000191241.1"; gene_type "lincRNA"; gene_name "Gm29433"; transcript_type "lincRNA"; transcript_name "Gm29433-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047739.1"; havana_transcript "OTTMUST00000122954.1";
mm10-chrY	HAVANA	exon	40367506	40367666	.	+	.	gene_id "ENSMUSG00000100043.1"; transcript_id "ENSMUST00000191241.1"; gene_type "lincRNA"; gene_name "Gm29433"; transcript_type "lincRNA"; transcript_name "Gm29433-201"; exon_number 1; exon_id "ENSMUSE00001325136.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047739.1"; havana_transcript "OTTMUST00000122954.1";
mm10-chrY	HAVANA	exon	40372660	40372751	.	+	.	gene_id "ENSMUSG00000100043.1"; transcript_id "ENSMUST00000191241.1"; gene_type "lincRNA"; gene_name "Gm29433"; transcript_type "lincRNA"; transcript_name "Gm29433-201"; exon_number 2; exon_id "ENSMUSE00001321480.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047739.1"; havana_transcript "OTTMUST00000122954.1";
mm10-chrY	HAVANA	gene	40367717	40370075	.	-	.	gene_id "ENSMUSG00000099786.6"; gene_type "lincRNA"; gene_name "Gm29215"; level 2; havana_gene "OTTMUSG00000047740.1";
mm10-chrY	HAVANA	transcript	40367717	40370075	.	-	.	gene_id "ENSMUSG00000099786.6"; transcript_id "ENSMUST00000188659.6"; gene_type "lincRNA"; gene_name "Gm29215"; transcript_type "lincRNA"; transcript_name "Gm29215-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047740.1"; havana_transcript "OTTMUST00000122955.1";
mm10-chrY	HAVANA	exon	40369891	40370075	.	-	.	gene_id "ENSMUSG00000099786.6"; transcript_id "ENSMUST00000188659.6"; gene_type "lincRNA"; gene_name "Gm29215"; transcript_type "lincRNA"; transcript_name "Gm29215-202"; exon_number 1; exon_id "ENSMUSE00001322256.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047740.1"; havana_transcript "OTTMUST00000122955.1";
mm10-chrY	HAVANA	exon	40369228	40369409	.	-	.	gene_id "ENSMUSG00000099786.6"; transcript_id "ENSMUST00000188659.6"; gene_type "lincRNA"; gene_name "Gm29215"; transcript_type "lincRNA"; transcript_name "Gm29215-202"; exon_number 2; exon_id "ENSMUSE00001335115.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047740.1"; havana_transcript "OTTMUST00000122955.1";
mm10-chrY	HAVANA	exon	40368314	40368498	.	-	.	gene_id "ENSMUSG00000099786.6"; transcript_id "ENSMUST00000188659.6"; gene_type "lincRNA"; gene_name "Gm29215"; transcript_type "lincRNA"; transcript_name "Gm29215-202"; exon_number 3; exon_id "ENSMUSE00001324499.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047740.1"; havana_transcript "OTTMUST00000122955.1";
mm10-chrY	HAVANA	exon	40367717	40367785	.	-	.	gene_id "ENSMUSG00000099786.6"; transcript_id "ENSMUST00000188659.6"; gene_type "lincRNA"; gene_name "Gm29215"; transcript_type "lincRNA"; transcript_name "Gm29215-202"; exon_number 4; exon_id "ENSMUSE00001331626.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047740.1"; havana_transcript "OTTMUST00000122955.1";
mm10-chrY	HAVANA	transcript	40367717	40370075	.	-	.	gene_id "ENSMUSG00000099786.6"; transcript_id "ENSMUST00000186607.1"; gene_type "lincRNA"; gene_name "Gm29215"; transcript_type "lincRNA"; transcript_name "Gm29215-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047740.1"; havana_transcript "OTTMUST00000122956.1";
mm10-chrY	HAVANA	exon	40369891	40370075	.	-	.	gene_id "ENSMUSG00000099786.6"; transcript_id "ENSMUST00000186607.1"; gene_type "lincRNA"; gene_name "Gm29215"; transcript_type "lincRNA"; transcript_name "Gm29215-201"; exon_number 1; exon_id "ENSMUSE00001322256.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047740.1"; havana_transcript "OTTMUST00000122956.1";
mm10-chrY	HAVANA	exon	40369228	40369409	.	-	.	gene_id "ENSMUSG00000099786.6"; transcript_id "ENSMUST00000186607.1"; gene_type "lincRNA"; gene_name "Gm29215"; transcript_type "lincRNA"; transcript_name "Gm29215-201"; exon_number 2; exon_id "ENSMUSE00001335115.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047740.1"; havana_transcript "OTTMUST00000122956.1";
mm10-chrY	HAVANA	exon	40367717	40367785	.	-	.	gene_id "ENSMUSG00000099786.6"; transcript_id "ENSMUST00000186607.1"; gene_type "lincRNA"; gene_name "Gm29215"; transcript_type "lincRNA"; transcript_name "Gm29215-201"; exon_number 3; exon_id "ENSMUSE00001331626.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047740.1"; havana_transcript "OTTMUST00000122956.1";
mm10-chrY	ENSEMBL	gene	40380441	40381523	.	-	.	gene_id "ENSMUSG00000094354.1"; gene_type "protein_coding"; gene_name "Gm21882"; level 3;
mm10-chrY	ENSEMBL	transcript	40380441	40381523	.	-	.	gene_id "ENSMUSG00000094354.1"; transcript_id "ENSMUST00000178332.1"; gene_type "protein_coding"; gene_name "Gm21882"; transcript_type "protein_coding"; transcript_name "Gm21882-201"; level 3; protein_id "ENSMUSP00000136641.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	40380441	40381523	.	-	.	gene_id "ENSMUSG00000094354.1"; transcript_id "ENSMUST00000178332.1"; gene_type "protein_coding"; gene_name "Gm21882"; transcript_type "protein_coding"; transcript_name "Gm21882-201"; exon_number 1; exon_id "ENSMUSE00000968307.1"; level 3; protein_id "ENSMUSP00000136641.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	40380441	40381523	.	-	0	gene_id "ENSMUSG00000094354.1"; transcript_id "ENSMUST00000178332.1"; gene_type "protein_coding"; gene_name "Gm21882"; transcript_type "protein_coding"; transcript_name "Gm21882-201"; exon_number 1; exon_id "ENSMUSE00000968307.1"; level 3; protein_id "ENSMUSP00000136641.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	40381521	40381523	.	-	0	gene_id "ENSMUSG00000094354.1"; transcript_id "ENSMUST00000178332.1"; gene_type "protein_coding"; gene_name "Gm21882"; transcript_type "protein_coding"; transcript_name "Gm21882-201"; exon_number 1; exon_id "ENSMUSE00000968307.1"; level 3; protein_id "ENSMUSP00000136641.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	40390922	40391449	.	-	.	gene_id "ENSMUSG00000095725.2"; gene_type "lincRNA"; gene_name "Gm21801"; level 2; havana_gene "OTTMUSG00000047741.1";
mm10-chrY	HAVANA	transcript	40390922	40391449	.	-	.	gene_id "ENSMUSG00000095725.2"; transcript_id "ENSMUST00000185537.1"; gene_type "lincRNA"; gene_name "Gm21801"; transcript_type "lincRNA"; transcript_name "Gm21801-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047741.1"; havana_transcript "OTTMUST00000122957.1";
mm10-chrY	HAVANA	exon	40391345	40391449	.	-	.	gene_id "ENSMUSG00000095725.2"; transcript_id "ENSMUST00000185537.1"; gene_type "lincRNA"; gene_name "Gm21801"; transcript_type "lincRNA"; transcript_name "Gm21801-202"; exon_number 1; exon_id "ENSMUSE00001326183.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047741.1"; havana_transcript "OTTMUST00000122957.1";
mm10-chrY	HAVANA	exon	40390922	40390990	.	-	.	gene_id "ENSMUSG00000095725.2"; transcript_id "ENSMUST00000185537.1"; gene_type "lincRNA"; gene_name "Gm21801"; transcript_type "lincRNA"; transcript_name "Gm21801-202"; exon_number 2; exon_id "ENSMUSE00001333130.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047741.1"; havana_transcript "OTTMUST00000122957.1";
mm10-chrY	ENSEMBL	transcript	40390946	40391443	.	-	.	gene_id "ENSMUSG00000095725.2"; transcript_id "ENSMUST00000178865.1"; gene_type "lincRNA"; gene_name "Gm21801"; transcript_type "lincRNA"; transcript_name "Gm21801-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000047741.1";
mm10-chrY	ENSEMBL	exon	40390946	40391443	.	-	.	gene_id "ENSMUSG00000095725.2"; transcript_id "ENSMUST00000178865.1"; gene_type "lincRNA"; gene_name "Gm21801"; transcript_type "lincRNA"; transcript_name "Gm21801-201"; exon_number 1; exon_id "ENSMUSE00000983626.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000047741.1";
mm10-chrY	HAVANA	gene	40431918	40434282	.	-	.	gene_id "ENSMUSG00000100900.6"; gene_type "lincRNA"; gene_name "Gm28850"; level 2; havana_gene "OTTMUSG00000047742.1";
mm10-chrY	HAVANA	transcript	40431918	40434282	.	-	.	gene_id "ENSMUSG00000100900.6"; transcript_id "ENSMUST00000189058.6"; gene_type "lincRNA"; gene_name "Gm28850"; transcript_type "lincRNA"; transcript_name "Gm28850-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047742.1"; havana_transcript "OTTMUST00000122958.1";
mm10-chrY	HAVANA	exon	40434097	40434282	.	-	.	gene_id "ENSMUSG00000100900.6"; transcript_id "ENSMUST00000189058.6"; gene_type "lincRNA"; gene_name "Gm28850"; transcript_type "lincRNA"; transcript_name "Gm28850-201"; exon_number 1; exon_id "ENSMUSE00001318861.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047742.1"; havana_transcript "OTTMUST00000122958.1";
mm10-chrY	HAVANA	exon	40433428	40433609	.	-	.	gene_id "ENSMUSG00000100900.6"; transcript_id "ENSMUST00000189058.6"; gene_type "lincRNA"; gene_name "Gm28850"; transcript_type "lincRNA"; transcript_name "Gm28850-201"; exon_number 2; exon_id "ENSMUSE00001325151.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047742.1"; havana_transcript "OTTMUST00000122958.1";
mm10-chrY	HAVANA	exon	40432515	40432699	.	-	.	gene_id "ENSMUSG00000100900.6"; transcript_id "ENSMUST00000189058.6"; gene_type "lincRNA"; gene_name "Gm28850"; transcript_type "lincRNA"; transcript_name "Gm28850-201"; exon_number 3; exon_id "ENSMUSE00001320392.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047742.1"; havana_transcript "OTTMUST00000122958.1";
mm10-chrY	HAVANA	exon	40431918	40431986	.	-	.	gene_id "ENSMUSG00000100900.6"; transcript_id "ENSMUST00000189058.6"; gene_type "lincRNA"; gene_name "Gm28850"; transcript_type "lincRNA"; transcript_name "Gm28850-201"; exon_number 4; exon_id "ENSMUSE00001328021.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047742.1"; havana_transcript "OTTMUST00000122958.1";
mm10-chrY	HAVANA	transcript	40431918	40434282	.	-	.	gene_id "ENSMUSG00000100900.6"; transcript_id "ENSMUST00000189274.1"; gene_type "lincRNA"; gene_name "Gm28850"; transcript_type "lincRNA"; transcript_name "Gm28850-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047742.1"; havana_transcript "OTTMUST00000122959.1";
mm10-chrY	HAVANA	exon	40434097	40434282	.	-	.	gene_id "ENSMUSG00000100900.6"; transcript_id "ENSMUST00000189274.1"; gene_type "lincRNA"; gene_name "Gm28850"; transcript_type "lincRNA"; transcript_name "Gm28850-202"; exon_number 1; exon_id "ENSMUSE00001318861.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047742.1"; havana_transcript "OTTMUST00000122959.1";
mm10-chrY	HAVANA	exon	40433428	40433609	.	-	.	gene_id "ENSMUSG00000100900.6"; transcript_id "ENSMUST00000189274.1"; gene_type "lincRNA"; gene_name "Gm28850"; transcript_type "lincRNA"; transcript_name "Gm28850-202"; exon_number 2; exon_id "ENSMUSE00001325151.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047742.1"; havana_transcript "OTTMUST00000122959.1";
mm10-chrY	HAVANA	exon	40431918	40431986	.	-	.	gene_id "ENSMUSG00000100900.6"; transcript_id "ENSMUST00000189274.1"; gene_type "lincRNA"; gene_name "Gm28850"; transcript_type "lincRNA"; transcript_name "Gm28850-202"; exon_number 3; exon_id "ENSMUSE00001328021.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047742.1"; havana_transcript "OTTMUST00000122959.1";
mm10-chrY	HAVANA	gene	40456743	40457270	.	-	.	gene_id "ENSMUSG00000095433.2"; gene_type "lincRNA"; gene_name "Gm21914"; level 2; havana_gene "OTTMUSG00000047769.1";
mm10-chrY	HAVANA	transcript	40456743	40457270	.	-	.	gene_id "ENSMUSG00000095433.2"; transcript_id "ENSMUST00000190577.1"; gene_type "lincRNA"; gene_name "Gm21914"; transcript_type "lincRNA"; transcript_name "Gm21914-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047769.1"; havana_transcript "OTTMUST00000122998.1";
mm10-chrY	HAVANA	exon	40457166	40457270	.	-	.	gene_id "ENSMUSG00000095433.2"; transcript_id "ENSMUST00000190577.1"; gene_type "lincRNA"; gene_name "Gm21914"; transcript_type "lincRNA"; transcript_name "Gm21914-202"; exon_number 1; exon_id "ENSMUSE00001321084.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047769.1"; havana_transcript "OTTMUST00000122998.1";
mm10-chrY	HAVANA	exon	40456743	40456811	.	-	.	gene_id "ENSMUSG00000095433.2"; transcript_id "ENSMUST00000190577.1"; gene_type "lincRNA"; gene_name "Gm21914"; transcript_type "lincRNA"; transcript_name "Gm21914-202"; exon_number 2; exon_id "ENSMUSE00001335708.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047769.1"; havana_transcript "OTTMUST00000122998.1";
mm10-chrY	ENSEMBL	transcript	40456767	40457264	.	-	.	gene_id "ENSMUSG00000095433.2"; transcript_id "ENSMUST00000178452.1"; gene_type "lincRNA"; gene_name "Gm21914"; transcript_type "lincRNA"; transcript_name "Gm21914-201"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000047769.1";
mm10-chrY	ENSEMBL	exon	40456767	40457264	.	-	.	gene_id "ENSMUSG00000095433.2"; transcript_id "ENSMUST00000178452.1"; gene_type "lincRNA"; gene_name "Gm21914"; transcript_type "lincRNA"; transcript_name "Gm21914-201"; exon_number 1; exon_id "ENSMUSE00001036686.1"; level 3; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000047769.1";
mm10-chrY	HAVANA	gene	40494488	40496767	.	-	.	gene_id "ENSMUSG00000100508.6"; gene_type "lincRNA"; gene_name "Gm28617"; level 2; havana_gene "OTTMUSG00000047770.1";
mm10-chrY	HAVANA	transcript	40494488	40496767	.	-	.	gene_id "ENSMUSG00000100508.6"; transcript_id "ENSMUST00000187191.6"; gene_type "lincRNA"; gene_name "Gm28617"; transcript_type "lincRNA"; transcript_name "Gm28617-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047770.1"; havana_transcript "OTTMUST00000122999.1";
mm10-chrY	HAVANA	exon	40496667	40496767	.	-	.	gene_id "ENSMUSG00000100508.6"; transcript_id "ENSMUST00000187191.6"; gene_type "lincRNA"; gene_name "Gm28617"; transcript_type "lincRNA"; transcript_name "Gm28617-201"; exon_number 1; exon_id "ENSMUSE00001325197.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047770.1"; havana_transcript "OTTMUST00000122999.1";
mm10-chrY	HAVANA	exon	40495998	40496179	.	-	.	gene_id "ENSMUSG00000100508.6"; transcript_id "ENSMUST00000187191.6"; gene_type "lincRNA"; gene_name "Gm28617"; transcript_type "lincRNA"; transcript_name "Gm28617-201"; exon_number 2; exon_id "ENSMUSE00001332169.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047770.1"; havana_transcript "OTTMUST00000122999.1";
mm10-chrY	HAVANA	exon	40494488	40494556	.	-	.	gene_id "ENSMUSG00000100508.6"; transcript_id "ENSMUST00000187191.6"; gene_type "lincRNA"; gene_name "Gm28617"; transcript_type "lincRNA"; transcript_name "Gm28617-201"; exon_number 3; exon_id "ENSMUSE00001335853.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047770.1"; havana_transcript "OTTMUST00000122999.1";
mm10-chrY	HAVANA	transcript	40494488	40496767	.	-	.	gene_id "ENSMUSG00000100508.6"; transcript_id "ENSMUST00000190129.1"; gene_type "lincRNA"; gene_name "Gm28617"; transcript_type "lincRNA"; transcript_name "Gm28617-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047770.1"; havana_transcript "OTTMUST00000123000.1";
mm10-chrY	HAVANA	exon	40496667	40496767	.	-	.	gene_id "ENSMUSG00000100508.6"; transcript_id "ENSMUST00000190129.1"; gene_type "lincRNA"; gene_name "Gm28617"; transcript_type "lincRNA"; transcript_name "Gm28617-202"; exon_number 1; exon_id "ENSMUSE00001325197.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047770.1"; havana_transcript "OTTMUST00000123000.1";
mm10-chrY	HAVANA	exon	40495998	40496179	.	-	.	gene_id "ENSMUSG00000100508.6"; transcript_id "ENSMUST00000190129.1"; gene_type "lincRNA"; gene_name "Gm28617"; transcript_type "lincRNA"; transcript_name "Gm28617-202"; exon_number 2; exon_id "ENSMUSE00001332169.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047770.1"; havana_transcript "OTTMUST00000123000.1";
mm10-chrY	HAVANA	exon	40495086	40495270	.	-	.	gene_id "ENSMUSG00000100508.6"; transcript_id "ENSMUST00000190129.1"; gene_type "lincRNA"; gene_name "Gm28617"; transcript_type "lincRNA"; transcript_name "Gm28617-202"; exon_number 3; exon_id "ENSMUSE00001327520.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047770.1"; havana_transcript "OTTMUST00000123000.1";
mm10-chrY	HAVANA	exon	40494488	40494556	.	-	.	gene_id "ENSMUSG00000100508.6"; transcript_id "ENSMUST00000190129.1"; gene_type "lincRNA"; gene_name "Gm28617"; transcript_type "lincRNA"; transcript_name "Gm28617-202"; exon_number 4; exon_id "ENSMUSE00001335853.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047770.1"; havana_transcript "OTTMUST00000123000.1";
mm10-chrY	HAVANA	gene	40566172	40566738	.	+	.	gene_id "ENSMUSG00000100771.1"; gene_type "processed_pseudogene"; gene_name "Gm28618"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047771.1";
mm10-chrY	HAVANA	transcript	40566172	40566738	.	+	.	gene_id "ENSMUSG00000100771.1"; transcript_id "ENSMUST00000189283.1"; gene_type "processed_pseudogene"; gene_name "Gm28618"; transcript_type "processed_pseudogene"; transcript_name "Gm28618-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047771.1"; havana_transcript "OTTMUST00000123001.1";
mm10-chrY	HAVANA	exon	40566172	40566738	.	+	.	gene_id "ENSMUSG00000100771.1"; transcript_id "ENSMUST00000189283.1"; gene_type "processed_pseudogene"; gene_name "Gm28618"; transcript_type "processed_pseudogene"; transcript_name "Gm28618-201"; exon_number 1; exon_id "ENSMUSE00001321759.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047771.1"; havana_transcript "OTTMUST00000123001.1";
mm10-chrY	HAVANA	gene	40638693	40641058	.	-	.	gene_id "ENSMUSG00000101090.6"; gene_type "lincRNA"; gene_name "Gm28619"; level 2; havana_gene "OTTMUSG00000047772.1";
mm10-chrY	HAVANA	transcript	40638693	40641058	.	-	.	gene_id "ENSMUSG00000101090.6"; transcript_id "ENSMUST00000185889.6"; gene_type "lincRNA"; gene_name "Gm28619"; transcript_type "lincRNA"; transcript_name "Gm28619-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047772.1"; havana_transcript "OTTMUST00000123002.1";
mm10-chrY	HAVANA	exon	40640872	40641058	.	-	.	gene_id "ENSMUSG00000101090.6"; transcript_id "ENSMUST00000185889.6"; gene_type "lincRNA"; gene_name "Gm28619"; transcript_type "lincRNA"; transcript_name "Gm28619-201"; exon_number 1; exon_id "ENSMUSE00001329376.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047772.1"; havana_transcript "OTTMUST00000123002.1";
mm10-chrY	HAVANA	exon	40640201	40640382	.	-	.	gene_id "ENSMUSG00000101090.6"; transcript_id "ENSMUST00000185889.6"; gene_type "lincRNA"; gene_name "Gm28619"; transcript_type "lincRNA"; transcript_name "Gm28619-201"; exon_number 2; exon_id "ENSMUSE00001321364.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047772.1"; havana_transcript "OTTMUST00000123002.1";
mm10-chrY	HAVANA	exon	40639288	40639472	.	-	.	gene_id "ENSMUSG00000101090.6"; transcript_id "ENSMUST00000185889.6"; gene_type "lincRNA"; gene_name "Gm28619"; transcript_type "lincRNA"; transcript_name "Gm28619-201"; exon_number 3; exon_id "ENSMUSE00001330727.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047772.1"; havana_transcript "OTTMUST00000123002.1";
mm10-chrY	HAVANA	exon	40638693	40638760	.	-	.	gene_id "ENSMUSG00000101090.6"; transcript_id "ENSMUST00000185889.6"; gene_type "lincRNA"; gene_name "Gm28619"; transcript_type "lincRNA"; transcript_name "Gm28619-201"; exon_number 4; exon_id "ENSMUSE00001335572.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047772.1"; havana_transcript "OTTMUST00000123002.1";
mm10-chrY	HAVANA	transcript	40638693	40641058	.	-	.	gene_id "ENSMUSG00000101090.6"; transcript_id "ENSMUST00000189278.1"; gene_type "lincRNA"; gene_name "Gm28619"; transcript_type "lincRNA"; transcript_name "Gm28619-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047772.1"; havana_transcript "OTTMUST00000123003.1";
mm10-chrY	HAVANA	exon	40640872	40641058	.	-	.	gene_id "ENSMUSG00000101090.6"; transcript_id "ENSMUST00000189278.1"; gene_type "lincRNA"; gene_name "Gm28619"; transcript_type "lincRNA"; transcript_name "Gm28619-202"; exon_number 1; exon_id "ENSMUSE00001329376.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047772.1"; havana_transcript "OTTMUST00000123003.1";
mm10-chrY	HAVANA	exon	40640201	40640382	.	-	.	gene_id "ENSMUSG00000101090.6"; transcript_id "ENSMUST00000189278.1"; gene_type "lincRNA"; gene_name "Gm28619"; transcript_type "lincRNA"; transcript_name "Gm28619-202"; exon_number 2; exon_id "ENSMUSE00001321364.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047772.1"; havana_transcript "OTTMUST00000123003.1";
mm10-chrY	HAVANA	exon	40638693	40638760	.	-	.	gene_id "ENSMUSG00000101090.6"; transcript_id "ENSMUST00000189278.1"; gene_type "lincRNA"; gene_name "Gm28619"; transcript_type "lincRNA"; transcript_name "Gm28619-202"; exon_number 3; exon_id "ENSMUSE00001335572.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047772.1"; havana_transcript "OTTMUST00000123003.1";
mm10-chrY	ENSEMBL	gene	40651454	40651996	.	-	.	gene_id "ENSMUSG00000096533.1"; gene_type "protein_coding"; gene_name "Gm21852"; level 3;
mm10-chrY	ENSEMBL	transcript	40651454	40651996	.	-	.	gene_id "ENSMUSG00000096533.1"; transcript_id "ENSMUST00000179125.1"; gene_type "protein_coding"; gene_name "Gm21852"; transcript_type "protein_coding"; transcript_name "Gm21852-201"; level 3; protein_id "ENSMUSP00000137379.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	40651454	40651996	.	-	.	gene_id "ENSMUSG00000096533.1"; transcript_id "ENSMUST00000179125.1"; gene_type "protein_coding"; gene_name "Gm21852"; transcript_type "protein_coding"; transcript_name "Gm21852-201"; exon_number 1; exon_id "ENSMUSE00000980707.1"; level 3; protein_id "ENSMUSP00000137379.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	40651457	40651996	.	-	0	gene_id "ENSMUSG00000096533.1"; transcript_id "ENSMUST00000179125.1"; gene_type "protein_coding"; gene_name "Gm21852"; transcript_type "protein_coding"; transcript_name "Gm21852-201"; exon_number 1; exon_id "ENSMUSE00000980707.1"; level 3; protein_id "ENSMUSP00000137379.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	40651994	40651996	.	-	0	gene_id "ENSMUSG00000096533.1"; transcript_id "ENSMUST00000179125.1"; gene_type "protein_coding"; gene_name "Gm21852"; transcript_type "protein_coding"; transcript_name "Gm21852-201"; exon_number 1; exon_id "ENSMUSE00000980707.1"; level 3; protein_id "ENSMUSP00000137379.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	40651454	40651456	.	-	0	gene_id "ENSMUSG00000096533.1"; transcript_id "ENSMUST00000179125.1"; gene_type "protein_coding"; gene_name "Gm21852"; transcript_type "protein_coding"; transcript_name "Gm21852-201"; exon_number 1; exon_id "ENSMUSE00000980707.1"; level 3; protein_id "ENSMUSP00000137379.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	40651454	40651456	.	-	.	gene_id "ENSMUSG00000096533.1"; transcript_id "ENSMUST00000179125.1"; gene_type "protein_coding"; gene_name "Gm21852"; transcript_type "protein_coding"; transcript_name "Gm21852-201"; exon_number 1; exon_id "ENSMUSE00000980707.1"; level 3; protein_id "ENSMUSP00000137379.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	40682046	40682741	.	+	.	gene_id "ENSMUSG00000100644.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20793"; level 2; havana_gene "OTTMUSG00000047773.1";
mm10-chrY	HAVANA	transcript	40682046	40682741	.	+	.	gene_id "ENSMUSG00000100644.1"; transcript_id "ENSMUST00000190779.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20793"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20793-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047773.1"; havana_transcript "OTTMUST00000123004.1";
mm10-chrY	HAVANA	exon	40682046	40682741	.	+	.	gene_id "ENSMUSG00000100644.1"; transcript_id "ENSMUST00000190779.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20793"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20793-201"; exon_number 1; exon_id "ENSMUSE00001335978.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047773.1"; havana_transcript "OTTMUST00000123004.1";
mm10-chrY	ENSEMBL	gene	40684181	40684290	.	+	.	gene_id "ENSMUSG00000098868.1"; gene_type "miRNA"; gene_name "Gm27466"; level 3;
mm10-chrY	ENSEMBL	transcript	40684181	40684290	.	+	.	gene_id "ENSMUSG00000098868.1"; transcript_id "ENSMUST00000184396.1"; gene_type "miRNA"; gene_name "Gm27466"; transcript_type "miRNA"; transcript_name "Gm27466-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	40684181	40684290	.	+	.	gene_id "ENSMUSG00000098868.1"; transcript_id "ENSMUST00000184396.1"; gene_type "miRNA"; gene_name "Gm27466"; transcript_type "miRNA"; transcript_name "Gm27466-201"; exon_number 1; exon_id "ENSMUSE00001313773.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	gene	40688738	40688847	.	+	.	gene_id "ENSMUSG00000099228.1"; gene_type "miRNA"; gene_name "Gm28018"; level 3;
mm10-chrY	ENSEMBL	transcript	40688738	40688847	.	+	.	gene_id "ENSMUSG00000099228.1"; transcript_id "ENSMUST00000103869.3"; gene_type "miRNA"; gene_name "Gm28018"; transcript_type "miRNA"; transcript_name "Gm28018-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	40688738	40688847	.	+	.	gene_id "ENSMUSG00000099228.1"; transcript_id "ENSMUST00000103869.3"; gene_type "miRNA"; gene_name "Gm28018"; transcript_type "miRNA"; transcript_name "Gm28018-201"; exon_number 1; exon_id "ENSMUSE00001008977.2"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	40733742	40736976	.	-	.	gene_id "ENSMUSG00000099379.1"; gene_type "lincRNA"; gene_name "Gm28993"; level 2; havana_gene "OTTMUSG00000047798.1";
mm10-chrY	HAVANA	transcript	40733742	40736976	.	-	.	gene_id "ENSMUSG00000099379.1"; transcript_id "ENSMUST00000186236.1"; gene_type "lincRNA"; gene_name "Gm28993"; transcript_type "lincRNA"; transcript_name "Gm28993-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047798.1"; havana_transcript "OTTMUST00000123046.1";
mm10-chrY	HAVANA	exon	40736338	40736976	.	-	.	gene_id "ENSMUSG00000099379.1"; transcript_id "ENSMUST00000186236.1"; gene_type "lincRNA"; gene_name "Gm28993"; transcript_type "lincRNA"; transcript_name "Gm28993-201"; exon_number 1; exon_id "ENSMUSE00001325351.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047798.1"; havana_transcript "OTTMUST00000123046.1";
mm10-chrY	HAVANA	exon	40735669	40735854	.	-	.	gene_id "ENSMUSG00000099379.1"; transcript_id "ENSMUST00000186236.1"; gene_type "lincRNA"; gene_name "Gm28993"; transcript_type "lincRNA"; transcript_name "Gm28993-201"; exon_number 2; exon_id "ENSMUSE00001335536.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047798.1"; havana_transcript "OTTMUST00000123046.1";
mm10-chrY	HAVANA	exon	40734758	40734941	.	-	.	gene_id "ENSMUSG00000099379.1"; transcript_id "ENSMUST00000186236.1"; gene_type "lincRNA"; gene_name "Gm28993"; transcript_type "lincRNA"; transcript_name "Gm28993-201"; exon_number 3; exon_id "ENSMUSE00001326037.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047798.1"; havana_transcript "OTTMUST00000123046.1";
mm10-chrY	HAVANA	exon	40733742	40734231	.	-	.	gene_id "ENSMUSG00000099379.1"; transcript_id "ENSMUST00000186236.1"; gene_type "lincRNA"; gene_name "Gm28993"; transcript_type "lincRNA"; transcript_name "Gm28993-201"; exon_number 4; exon_id "ENSMUSE00001327710.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047798.1"; havana_transcript "OTTMUST00000123046.1";
mm10-chrY	HAVANA	transcript	40734163	40736523	.	-	.	gene_id "ENSMUSG00000099379.1"; transcript_id "ENSMUST00000188645.1"; gene_type "lincRNA"; gene_name "Gm28993"; transcript_type "lincRNA"; transcript_name "Gm28993-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047798.1"; havana_transcript "OTTMUST00000123047.1";
mm10-chrY	HAVANA	exon	40736338	40736523	.	-	.	gene_id "ENSMUSG00000099379.1"; transcript_id "ENSMUST00000188645.1"; gene_type "lincRNA"; gene_name "Gm28993"; transcript_type "lincRNA"; transcript_name "Gm28993-202"; exon_number 1; exon_id "ENSMUSE00001332923.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047798.1"; havana_transcript "OTTMUST00000123047.1";
mm10-chrY	HAVANA	exon	40735669	40735850	.	-	.	gene_id "ENSMUSG00000099379.1"; transcript_id "ENSMUST00000188645.1"; gene_type "lincRNA"; gene_name "Gm28993"; transcript_type "lincRNA"; transcript_name "Gm28993-202"; exon_number 2; exon_id "ENSMUSE00001322493.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047798.1"; havana_transcript "OTTMUST00000123047.1";
mm10-chrY	HAVANA	exon	40734163	40734231	.	-	.	gene_id "ENSMUSG00000099379.1"; transcript_id "ENSMUST00000188645.1"; gene_type "lincRNA"; gene_name "Gm28993"; transcript_type "lincRNA"; transcript_name "Gm28993-202"; exon_number 3; exon_id "ENSMUSE00001325543.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047798.1"; havana_transcript "OTTMUST00000123047.1";
mm10-chrY	HAVANA	gene	40762505	40764868	.	-	.	gene_id "ENSMUSG00000100070.6"; gene_type "lincRNA"; gene_name "Gm28994"; level 2; havana_gene "OTTMUSG00000047799.1";
mm10-chrY	HAVANA	transcript	40762505	40764868	.	-	.	gene_id "ENSMUSG00000100070.6"; transcript_id "ENSMUST00000188556.6"; gene_type "lincRNA"; gene_name "Gm28994"; transcript_type "lincRNA"; transcript_name "Gm28994-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047799.1"; havana_transcript "OTTMUST00000123048.1";
mm10-chrY	HAVANA	exon	40764682	40764868	.	-	.	gene_id "ENSMUSG00000100070.6"; transcript_id "ENSMUST00000188556.6"; gene_type "lincRNA"; gene_name "Gm28994"; transcript_type "lincRNA"; transcript_name "Gm28994-201"; exon_number 1; exon_id "ENSMUSE00001328387.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047799.1"; havana_transcript "OTTMUST00000123048.1";
mm10-chrY	HAVANA	exon	40764011	40764192	.	-	.	gene_id "ENSMUSG00000100070.6"; transcript_id "ENSMUST00000188556.6"; gene_type "lincRNA"; gene_name "Gm28994"; transcript_type "lincRNA"; transcript_name "Gm28994-201"; exon_number 2; exon_id "ENSMUSE00001318029.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047799.1"; havana_transcript "OTTMUST00000123048.1";
mm10-chrY	HAVANA	exon	40763100	40763283	.	-	.	gene_id "ENSMUSG00000100070.6"; transcript_id "ENSMUST00000188556.6"; gene_type "lincRNA"; gene_name "Gm28994"; transcript_type "lincRNA"; transcript_name "Gm28994-201"; exon_number 3; exon_id "ENSMUSE00001330089.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047799.1"; havana_transcript "OTTMUST00000123048.1";
mm10-chrY	HAVANA	exon	40762505	40762572	.	-	.	gene_id "ENSMUSG00000100070.6"; transcript_id "ENSMUST00000188556.6"; gene_type "lincRNA"; gene_name "Gm28994"; transcript_type "lincRNA"; transcript_name "Gm28994-201"; exon_number 4; exon_id "ENSMUSE00001320293.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047799.1"; havana_transcript "OTTMUST00000123048.1";
mm10-chrY	HAVANA	transcript	40762505	40764868	.	-	.	gene_id "ENSMUSG00000100070.6"; transcript_id "ENSMUST00000190328.1"; gene_type "lincRNA"; gene_name "Gm28994"; transcript_type "lincRNA"; transcript_name "Gm28994-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047799.1"; havana_transcript "OTTMUST00000123049.1";
mm10-chrY	HAVANA	exon	40764682	40764868	.	-	.	gene_id "ENSMUSG00000100070.6"; transcript_id "ENSMUST00000190328.1"; gene_type "lincRNA"; gene_name "Gm28994"; transcript_type "lincRNA"; transcript_name "Gm28994-202"; exon_number 1; exon_id "ENSMUSE00001328387.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047799.1"; havana_transcript "OTTMUST00000123049.1";
mm10-chrY	HAVANA	exon	40764011	40764192	.	-	.	gene_id "ENSMUSG00000100070.6"; transcript_id "ENSMUST00000190328.1"; gene_type "lincRNA"; gene_name "Gm28994"; transcript_type "lincRNA"; transcript_name "Gm28994-202"; exon_number 2; exon_id "ENSMUSE00001318029.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047799.1"; havana_transcript "OTTMUST00000123049.1";
mm10-chrY	HAVANA	exon	40762505	40762572	.	-	.	gene_id "ENSMUSG00000100070.6"; transcript_id "ENSMUST00000190328.1"; gene_type "lincRNA"; gene_name "Gm28994"; transcript_type "lincRNA"; transcript_name "Gm28994-202"; exon_number 3; exon_id "ENSMUSE00001320293.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047799.1"; havana_transcript "OTTMUST00000123049.1";
mm10-chrY	ENSEMBL	gene	40775223	40775765	.	-	.	gene_id "ENSMUSG00000096885.1"; gene_type "protein_coding"; gene_name "Gm21797"; level 3;
mm10-chrY	ENSEMBL	transcript	40775223	40775765	.	-	.	gene_id "ENSMUSG00000096885.1"; transcript_id "ENSMUST00000177579.1"; gene_type "protein_coding"; gene_name "Gm21797"; transcript_type "protein_coding"; transcript_name "Gm21797-201"; level 3; protein_id "ENSMUSP00000136989.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	40775223	40775765	.	-	.	gene_id "ENSMUSG00000096885.1"; transcript_id "ENSMUST00000177579.1"; gene_type "protein_coding"; gene_name "Gm21797"; transcript_type "protein_coding"; transcript_name "Gm21797-201"; exon_number 1; exon_id "ENSMUSE00000986561.1"; level 3; protein_id "ENSMUSP00000136989.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	40775226	40775765	.	-	0	gene_id "ENSMUSG00000096885.1"; transcript_id "ENSMUST00000177579.1"; gene_type "protein_coding"; gene_name "Gm21797"; transcript_type "protein_coding"; transcript_name "Gm21797-201"; exon_number 1; exon_id "ENSMUSE00000986561.1"; level 3; protein_id "ENSMUSP00000136989.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	40775763	40775765	.	-	0	gene_id "ENSMUSG00000096885.1"; transcript_id "ENSMUST00000177579.1"; gene_type "protein_coding"; gene_name "Gm21797"; transcript_type "protein_coding"; transcript_name "Gm21797-201"; exon_number 1; exon_id "ENSMUSE00000986561.1"; level 3; protein_id "ENSMUSP00000136989.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	40775223	40775225	.	-	0	gene_id "ENSMUSG00000096885.1"; transcript_id "ENSMUST00000177579.1"; gene_type "protein_coding"; gene_name "Gm21797"; transcript_type "protein_coding"; transcript_name "Gm21797-201"; exon_number 1; exon_id "ENSMUSE00000986561.1"; level 3; protein_id "ENSMUSP00000136989.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	40775223	40775225	.	-	.	gene_id "ENSMUSG00000096885.1"; transcript_id "ENSMUST00000177579.1"; gene_type "protein_coding"; gene_name "Gm21797"; transcript_type "protein_coding"; transcript_name "Gm21797-201"; exon_number 1; exon_id "ENSMUSE00000986561.1"; level 3; protein_id "ENSMUSP00000136989.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	40804914	40807356	.	+	.	gene_id "ENSMUSG00000095452.2"; gene_type "protein_coding"; gene_name "Gm20795"; level 2; havana_gene "OTTMUSG00000047800.1";
mm10-chrY	HAVANA	transcript	40804914	40807356	.	+	.	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000190909.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-202"; level 2; protein_id "ENSMUSP00000139666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1"; havana_transcript "OTTMUST00000123050.1";
mm10-chrY	HAVANA	exon	40804914	40805104	.	+	.	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000190909.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-202"; exon_number 1; exon_id "ENSMUSE00001331488.1"; level 2; protein_id "ENSMUSP00000139666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1"; havana_transcript "OTTMUST00000123050.1";
mm10-chrY	HAVANA	exon	40805329	40805515	.	+	.	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000190909.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-202"; exon_number 2; exon_id "ENSMUSE00001335142.1"; level 2; protein_id "ENSMUSP00000139666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1"; havana_transcript "OTTMUST00000123050.1";
mm10-chrY	HAVANA	exon	40806391	40807356	.	+	.	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000190909.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-202"; exon_number 3; exon_id "ENSMUSE00001325807.1"; level 2; protein_id "ENSMUSP00000139666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1"; havana_transcript "OTTMUST00000123050.1";
mm10-chrY	HAVANA	CDS	40806531	40807226	.	+	0	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000190909.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-202"; exon_number 3; exon_id "ENSMUSE00001325807.1"; level 2; protein_id "ENSMUSP00000139666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1"; havana_transcript "OTTMUST00000123050.1";
mm10-chrY	HAVANA	start_codon	40806531	40806533	.	+	0	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000190909.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-202"; exon_number 3; exon_id "ENSMUSE00001325807.1"; level 2; protein_id "ENSMUSP00000139666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1"; havana_transcript "OTTMUST00000123050.1";
mm10-chrY	HAVANA	stop_codon	40807227	40807229	.	+	0	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000190909.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-202"; exon_number 3; exon_id "ENSMUSE00001325807.1"; level 2; protein_id "ENSMUSP00000139666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1"; havana_transcript "OTTMUST00000123050.1";
mm10-chrY	HAVANA	UTR	40804914	40805104	.	+	.	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000190909.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-202"; exon_number 1; exon_id "ENSMUSE00001331488.1"; level 2; protein_id "ENSMUSP00000139666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1"; havana_transcript "OTTMUST00000123050.1";
mm10-chrY	HAVANA	UTR	40805329	40805515	.	+	.	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000190909.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-202"; exon_number 2; exon_id "ENSMUSE00001335142.1"; level 2; protein_id "ENSMUSP00000139666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1"; havana_transcript "OTTMUST00000123050.1";
mm10-chrY	HAVANA	UTR	40806391	40806530	.	+	.	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000190909.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-202"; exon_number 3; exon_id "ENSMUSE00001325807.1"; level 2; protein_id "ENSMUSP00000139666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1"; havana_transcript "OTTMUST00000123050.1";
mm10-chrY	HAVANA	UTR	40807227	40807356	.	+	.	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000190909.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-202"; exon_number 3; exon_id "ENSMUSE00001325807.1"; level 2; protein_id "ENSMUSP00000139666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1"; havana_transcript "OTTMUST00000123050.1";
mm10-chrY	ENSEMBL	transcript	40806531	40807229	.	+	.	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000178528.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-201"; level 3; protein_id "ENSMUSP00000136073.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1";
mm10-chrY	ENSEMBL	exon	40806531	40807229	.	+	.	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000178528.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-201"; exon_number 1; exon_id "ENSMUSE00000990257.1"; level 3; protein_id "ENSMUSP00000136073.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1";
mm10-chrY	ENSEMBL	CDS	40806531	40807226	.	+	0	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000178528.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-201"; exon_number 1; exon_id "ENSMUSE00000990257.1"; level 3; protein_id "ENSMUSP00000136073.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1";
mm10-chrY	ENSEMBL	start_codon	40806531	40806533	.	+	0	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000178528.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-201"; exon_number 1; exon_id "ENSMUSE00000990257.1"; level 3; protein_id "ENSMUSP00000136073.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1";
mm10-chrY	ENSEMBL	stop_codon	40807227	40807229	.	+	0	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000178528.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-201"; exon_number 1; exon_id "ENSMUSE00000990257.1"; level 3; protein_id "ENSMUSP00000136073.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1";
mm10-chrY	ENSEMBL	UTR	40807227	40807229	.	+	.	gene_id "ENSMUSG00000095452.2"; transcript_id "ENSMUST00000178528.1"; gene_type "protein_coding"; gene_name "Gm20795"; transcript_type "protein_coding"; transcript_name "Gm20795-201"; exon_number 1; exon_id "ENSMUSE00000990257.1"; level 3; protein_id "ENSMUSP00000136073.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047800.1";
mm10-chrY	HAVANA	gene	40843557	40844252	.	+	.	gene_id "ENSMUSG00000100797.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28596"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047801.1";
mm10-chrY	HAVANA	transcript	40843557	40844252	.	+	.	gene_id "ENSMUSG00000100797.1"; transcript_id "ENSMUST00000185870.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28596"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28596-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047801.1"; havana_transcript "OTTMUST00000123051.1";
mm10-chrY	HAVANA	exon	40843557	40844252	.	+	.	gene_id "ENSMUSG00000100797.1"; transcript_id "ENSMUST00000185870.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28596"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28596-201"; exon_number 1; exon_id "ENSMUSE00001319469.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047801.1"; havana_transcript "OTTMUST00000123051.1";
mm10-chrY	HAVANA	gene	40905273	40935589	.	-	.	gene_id "ENSMUSG00000099645.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20832"; level 2; havana_gene "OTTMUSG00000047808.1";
mm10-chrY	HAVANA	transcript	40905273	40935589	.	-	.	gene_id "ENSMUSG00000099645.1"; transcript_id "ENSMUST00000189076.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20832-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047808.1"; havana_transcript "OTTMUST00000123063.1";
mm10-chrY	HAVANA	exon	40935472	40935589	.	-	.	gene_id "ENSMUSG00000099645.1"; transcript_id "ENSMUST00000189076.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20832-201"; exon_number 1; exon_id "ENSMUSE00001321590.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047808.1"; havana_transcript "OTTMUST00000123063.1";
mm10-chrY	HAVANA	exon	40924165	40924231	.	-	.	gene_id "ENSMUSG00000099645.1"; transcript_id "ENSMUST00000189076.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20832-201"; exon_number 2; exon_id "ENSMUSE00001330134.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047808.1"; havana_transcript "OTTMUST00000123063.1";
mm10-chrY	HAVANA	exon	40923553	40923587	.	-	.	gene_id "ENSMUSG00000099645.1"; transcript_id "ENSMUST00000189076.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20832-201"; exon_number 3; exon_id "ENSMUSE00001324296.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047808.1"; havana_transcript "OTTMUST00000123063.1";
mm10-chrY	HAVANA	exon	40916481	40916547	.	-	.	gene_id "ENSMUSG00000099645.1"; transcript_id "ENSMUST00000189076.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20832-201"; exon_number 4; exon_id "ENSMUSE00001322778.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047808.1"; havana_transcript "OTTMUST00000123063.1";
mm10-chrY	HAVANA	exon	40915872	40915906	.	-	.	gene_id "ENSMUSG00000099645.1"; transcript_id "ENSMUST00000189076.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20832-201"; exon_number 5; exon_id "ENSMUSE00001320563.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047808.1"; havana_transcript "OTTMUST00000123063.1";
mm10-chrY	HAVANA	exon	40908615	40908732	.	-	.	gene_id "ENSMUSG00000099645.1"; transcript_id "ENSMUST00000189076.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20832-201"; exon_number 6; exon_id "ENSMUSE00001333205.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047808.1"; havana_transcript "OTTMUST00000123063.1";
mm10-chrY	HAVANA	exon	40907781	40907879	.	-	.	gene_id "ENSMUSG00000099645.1"; transcript_id "ENSMUST00000189076.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20832-201"; exon_number 7; exon_id "ENSMUSE00001331552.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047808.1"; havana_transcript "OTTMUST00000123063.1";
mm10-chrY	HAVANA	exon	40905658	40905756	.	-	.	gene_id "ENSMUSG00000099645.1"; transcript_id "ENSMUST00000189076.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20832-201"; exon_number 8; exon_id "ENSMUSE00001332933.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047808.1"; havana_transcript "OTTMUST00000123063.1";
mm10-chrY	HAVANA	exon	40905273	40905299	.	-	.	gene_id "ENSMUSG00000099645.1"; transcript_id "ENSMUST00000189076.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20832-201"; exon_number 9; exon_id "ENSMUSE00001321826.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047808.1"; havana_transcript "OTTMUST00000123063.1";
mm10-chrY	HAVANA	gene	41243623	41274433	.	+	.	gene_id "ENSMUSG00000100091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28597"; level 2; havana_gene "OTTMUSG00000047809.2";
mm10-chrY	HAVANA	transcript	41243623	41274433	.	+	.	gene_id "ENSMUSG00000100091.1"; transcript_id "ENSMUST00000187664.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28597"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28597-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047809.2"; havana_transcript "OTTMUST00000123064.2";
mm10-chrY	HAVANA	exon	41243623	41243740	.	+	.	gene_id "ENSMUSG00000100091.1"; transcript_id "ENSMUST00000187664.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28597"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28597-201"; exon_number 1; exon_id "ENSMUSE00001328985.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047809.2"; havana_transcript "OTTMUST00000123064.2";
mm10-chrY	HAVANA	exon	41255454	41255520	.	+	.	gene_id "ENSMUSG00000100091.1"; transcript_id "ENSMUST00000187664.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28597"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28597-201"; exon_number 2; exon_id "ENSMUSE00001329297.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047809.2"; havana_transcript "OTTMUST00000123064.2";
mm10-chrY	HAVANA	exon	41256061	41256095	.	+	.	gene_id "ENSMUSG00000100091.1"; transcript_id "ENSMUST00000187664.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28597"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28597-201"; exon_number 3; exon_id "ENSMUSE00001324592.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047809.2"; havana_transcript "OTTMUST00000123064.2";
mm10-chrY	HAVANA	exon	41263130	41263196	.	+	.	gene_id "ENSMUSG00000100091.1"; transcript_id "ENSMUST00000187664.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28597"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28597-201"; exon_number 4; exon_id "ENSMUSE00001326544.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047809.2"; havana_transcript "OTTMUST00000123064.2";
mm10-chrY	HAVANA	exon	41263784	41263818	.	+	.	gene_id "ENSMUSG00000100091.1"; transcript_id "ENSMUST00000187664.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28597"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28597-201"; exon_number 5; exon_id "ENSMUSE00001320720.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047809.2"; havana_transcript "OTTMUST00000123064.2";
mm10-chrY	HAVANA	exon	41270933	41271050	.	+	.	gene_id "ENSMUSG00000100091.1"; transcript_id "ENSMUST00000187664.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28597"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28597-201"; exon_number 6; exon_id "ENSMUSE00001323950.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047809.2"; havana_transcript "OTTMUST00000123064.2";
mm10-chrY	HAVANA	exon	41271824	41271923	.	+	.	gene_id "ENSMUSG00000100091.1"; transcript_id "ENSMUST00000187664.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28597"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28597-201"; exon_number 7; exon_id "ENSMUSE00001323431.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047809.2"; havana_transcript "OTTMUST00000123064.2";
mm10-chrY	HAVANA	exon	41273949	41274047	.	+	.	gene_id "ENSMUSG00000100091.1"; transcript_id "ENSMUST00000187664.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28597"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28597-201"; exon_number 8; exon_id "ENSMUSE00001327221.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047809.2"; havana_transcript "OTTMUST00000123064.2";
mm10-chrY	HAVANA	exon	41274407	41274433	.	+	.	gene_id "ENSMUSG00000100091.1"; transcript_id "ENSMUST00000187664.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28597"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28597-201"; exon_number 9; exon_id "ENSMUSE00001326514.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047809.2"; havana_transcript "OTTMUST00000123064.2";
mm10-chrY	HAVANA	gene	41338828	41339524	.	-	.	gene_id "ENSMUSG00000100649.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28428"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047835.1";
mm10-chrY	HAVANA	transcript	41338828	41339524	.	-	.	gene_id "ENSMUSG00000100649.1"; transcript_id "ENSMUST00000188886.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28428"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28428-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047835.1"; havana_transcript "OTTMUST00000123091.1";
mm10-chrY	HAVANA	exon	41338828	41339524	.	-	.	gene_id "ENSMUSG00000100649.1"; transcript_id "ENSMUST00000188886.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28428"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28428-201"; exon_number 1; exon_id "ENSMUSE00001331407.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047835.1"; havana_transcript "OTTMUST00000123091.1";
mm10-chrY	HAVANA	gene	41375734	41376429	.	-	.	gene_id "ENSMUSG00000100196.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20827"; level 2; havana_gene "OTTMUSG00000047836.1";
mm10-chrY	HAVANA	transcript	41375734	41376429	.	-	.	gene_id "ENSMUSG00000100196.1"; transcript_id "ENSMUST00000187928.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20827"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20827-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047836.1"; havana_transcript "OTTMUST00000123092.1";
mm10-chrY	HAVANA	exon	41375734	41376429	.	-	.	gene_id "ENSMUSG00000100196.1"; transcript_id "ENSMUST00000187928.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20827"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20827-201"; exon_number 1; exon_id "ENSMUSE00001321284.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047836.1"; havana_transcript "OTTMUST00000123092.1";
mm10-chrY	HAVANA	gene	41382437	41385771	.	-	.	gene_id "ENSMUSG00000099628.1"; gene_type "lincRNA"; gene_name "Gm28427"; level 2; havana_gene "OTTMUSG00000047837.1";
mm10-chrY	HAVANA	transcript	41382437	41385771	.	-	.	gene_id "ENSMUSG00000099628.1"; transcript_id "ENSMUST00000190144.1"; gene_type "lincRNA"; gene_name "Gm28427"; transcript_type "lincRNA"; transcript_name "Gm28427-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047837.1"; havana_transcript "OTTMUST00000123093.1";
mm10-chrY	HAVANA	exon	41385556	41385771	.	-	.	gene_id "ENSMUSG00000099628.1"; transcript_id "ENSMUST00000190144.1"; gene_type "lincRNA"; gene_name "Gm28427"; transcript_type "lincRNA"; transcript_name "Gm28427-201"; exon_number 1; exon_id "ENSMUSE00001332307.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047837.1"; havana_transcript "OTTMUST00000123093.1";
mm10-chrY	HAVANA	exon	41382437	41384382	.	-	.	gene_id "ENSMUSG00000099628.1"; transcript_id "ENSMUST00000190144.1"; gene_type "lincRNA"; gene_name "Gm28427"; transcript_type "lincRNA"; transcript_name "Gm28427-201"; exon_number 2; exon_id "ENSMUSE00001321846.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047837.1"; havana_transcript "OTTMUST00000123093.1";
mm10-chrY	ENSEMBL	gene	41406498	41407040	.	+	.	gene_id "ENSMUSG00000096120.1"; gene_type "protein_coding"; gene_name "Gm21800"; level 3;
mm10-chrY	ENSEMBL	transcript	41406498	41407040	.	+	.	gene_id "ENSMUSG00000096120.1"; transcript_id "ENSMUST00000178559.1"; gene_type "protein_coding"; gene_name "Gm21800"; transcript_type "protein_coding"; transcript_name "Gm21800-201"; level 3; protein_id "ENSMUSP00000136321.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	41406498	41407040	.	+	.	gene_id "ENSMUSG00000096120.1"; transcript_id "ENSMUST00000178559.1"; gene_type "protein_coding"; gene_name "Gm21800"; transcript_type "protein_coding"; transcript_name "Gm21800-201"; exon_number 1; exon_id "ENSMUSE00001018298.1"; level 3; protein_id "ENSMUSP00000136321.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	41406498	41407037	.	+	0	gene_id "ENSMUSG00000096120.1"; transcript_id "ENSMUST00000178559.1"; gene_type "protein_coding"; gene_name "Gm21800"; transcript_type "protein_coding"; transcript_name "Gm21800-201"; exon_number 1; exon_id "ENSMUSE00001018298.1"; level 3; protein_id "ENSMUSP00000136321.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	41406498	41406500	.	+	0	gene_id "ENSMUSG00000096120.1"; transcript_id "ENSMUST00000178559.1"; gene_type "protein_coding"; gene_name "Gm21800"; transcript_type "protein_coding"; transcript_name "Gm21800-201"; exon_number 1; exon_id "ENSMUSE00001018298.1"; level 3; protein_id "ENSMUSP00000136321.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	41407038	41407040	.	+	0	gene_id "ENSMUSG00000096120.1"; transcript_id "ENSMUST00000178559.1"; gene_type "protein_coding"; gene_name "Gm21800"; transcript_type "protein_coding"; transcript_name "Gm21800-201"; exon_number 1; exon_id "ENSMUSE00001018298.1"; level 3; protein_id "ENSMUSP00000136321.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	41407038	41407040	.	+	.	gene_id "ENSMUSG00000096120.1"; transcript_id "ENSMUST00000178559.1"; gene_type "protein_coding"; gene_name "Gm21800"; transcript_type "protein_coding"; transcript_name "Gm21800-201"; exon_number 1; exon_id "ENSMUSE00001018298.1"; level 3; protein_id "ENSMUSP00000136321.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	41417432	41419796	.	+	.	gene_id "ENSMUSG00000099897.6"; gene_type "lincRNA"; gene_name "Gm28426"; level 2; havana_gene "OTTMUSG00000047838.1";
mm10-chrY	HAVANA	transcript	41417432	41419794	.	+	.	gene_id "ENSMUSG00000099897.6"; transcript_id "ENSMUST00000189840.6"; gene_type "lincRNA"; gene_name "Gm28426"; transcript_type "lincRNA"; transcript_name "Gm28426-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047838.1"; havana_transcript "OTTMUST00000123094.1";
mm10-chrY	HAVANA	exon	41417432	41417618	.	+	.	gene_id "ENSMUSG00000099897.6"; transcript_id "ENSMUST00000189840.6"; gene_type "lincRNA"; gene_name "Gm28426"; transcript_type "lincRNA"; transcript_name "Gm28426-202"; exon_number 1; exon_id "ENSMUSE00001318763.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047838.1"; havana_transcript "OTTMUST00000123094.1";
mm10-chrY	HAVANA	exon	41418108	41418289	.	+	.	gene_id "ENSMUSG00000099897.6"; transcript_id "ENSMUST00000189840.6"; gene_type "lincRNA"; gene_name "Gm28426"; transcript_type "lincRNA"; transcript_name "Gm28426-202"; exon_number 2; exon_id "ENSMUSE00001333889.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047838.1"; havana_transcript "OTTMUST00000123094.1";
mm10-chrY	HAVANA	exon	41419729	41419794	.	+	.	gene_id "ENSMUSG00000099897.6"; transcript_id "ENSMUST00000189840.6"; gene_type "lincRNA"; gene_name "Gm28426"; transcript_type "lincRNA"; transcript_name "Gm28426-202"; exon_number 3; exon_id "ENSMUSE00001328867.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047838.1"; havana_transcript "OTTMUST00000123094.1";
mm10-chrY	HAVANA	transcript	41417432	41419796	.	+	.	gene_id "ENSMUSG00000099897.6"; transcript_id "ENSMUST00000187385.1"; gene_type "lincRNA"; gene_name "Gm28426"; transcript_type "lincRNA"; transcript_name "Gm28426-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047838.1"; havana_transcript "OTTMUST00000123095.1";
mm10-chrY	HAVANA	exon	41417432	41417618	.	+	.	gene_id "ENSMUSG00000099897.6"; transcript_id "ENSMUST00000187385.1"; gene_type "lincRNA"; gene_name "Gm28426"; transcript_type "lincRNA"; transcript_name "Gm28426-201"; exon_number 1; exon_id "ENSMUSE00001318763.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047838.1"; havana_transcript "OTTMUST00000123095.1";
mm10-chrY	HAVANA	exon	41418108	41418289	.	+	.	gene_id "ENSMUSG00000099897.6"; transcript_id "ENSMUST00000187385.1"; gene_type "lincRNA"; gene_name "Gm28426"; transcript_type "lincRNA"; transcript_name "Gm28426-201"; exon_number 2; exon_id "ENSMUSE00001333889.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047838.1"; havana_transcript "OTTMUST00000123095.1";
mm10-chrY	HAVANA	exon	41419019	41419201	.	+	.	gene_id "ENSMUSG00000099897.6"; transcript_id "ENSMUST00000187385.1"; gene_type "lincRNA"; gene_name "Gm28426"; transcript_type "lincRNA"; transcript_name "Gm28426-201"; exon_number 3; exon_id "ENSMUSE00001321836.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047838.1"; havana_transcript "OTTMUST00000123095.1";
mm10-chrY	HAVANA	exon	41419729	41419796	.	+	.	gene_id "ENSMUSG00000099897.6"; transcript_id "ENSMUST00000187385.1"; gene_type "lincRNA"; gene_name "Gm28426"; transcript_type "lincRNA"; transcript_name "Gm28426-201"; exon_number 4; exon_id "ENSMUSE00001320918.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047838.1"; havana_transcript "OTTMUST00000123095.1";
mm10-chrY	HAVANA	gene	41445822	41448182	.	+	.	gene_id "ENSMUSG00000099785.6"; gene_type "lincRNA"; gene_name "Gm28425"; level 2; havana_gene "OTTMUSG00000047839.1";
mm10-chrY	HAVANA	transcript	41445822	41448182	.	+	.	gene_id "ENSMUSG00000099785.6"; transcript_id "ENSMUST00000191542.6"; gene_type "lincRNA"; gene_name "Gm28425"; transcript_type "lincRNA"; transcript_name "Gm28425-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047839.1"; havana_transcript "OTTMUST00000123096.1";
mm10-chrY	HAVANA	exon	41445822	41446007	.	+	.	gene_id "ENSMUSG00000099785.6"; transcript_id "ENSMUST00000191542.6"; gene_type "lincRNA"; gene_name "Gm28425"; transcript_type "lincRNA"; transcript_name "Gm28425-202"; exon_number 1; exon_id "ENSMUSE00001334279.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047839.1"; havana_transcript "OTTMUST00000123096.1";
mm10-chrY	HAVANA	exon	41446495	41446676	.	+	.	gene_id "ENSMUSG00000099785.6"; transcript_id "ENSMUST00000191542.6"; gene_type "lincRNA"; gene_name "Gm28425"; transcript_type "lincRNA"; transcript_name "Gm28425-202"; exon_number 2; exon_id "ENSMUSE00001322830.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047839.1"; havana_transcript "OTTMUST00000123096.1";
mm10-chrY	HAVANA	exon	41447404	41447587	.	+	.	gene_id "ENSMUSG00000099785.6"; transcript_id "ENSMUST00000191542.6"; gene_type "lincRNA"; gene_name "Gm28425"; transcript_type "lincRNA"; transcript_name "Gm28425-202"; exon_number 3; exon_id "ENSMUSE00001332990.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047839.1"; havana_transcript "OTTMUST00000123096.1";
mm10-chrY	HAVANA	exon	41448114	41448182	.	+	.	gene_id "ENSMUSG00000099785.6"; transcript_id "ENSMUST00000191542.6"; gene_type "lincRNA"; gene_name "Gm28425"; transcript_type "lincRNA"; transcript_name "Gm28425-202"; exon_number 4; exon_id "ENSMUSE00001323574.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047839.1"; havana_transcript "OTTMUST00000123096.1";
mm10-chrY	HAVANA	transcript	41445822	41448182	.	+	.	gene_id "ENSMUSG00000099785.6"; transcript_id "ENSMUST00000190439.1"; gene_type "lincRNA"; gene_name "Gm28425"; transcript_type "lincRNA"; transcript_name "Gm28425-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047839.1"; havana_transcript "OTTMUST00000123097.1";
mm10-chrY	HAVANA	exon	41445822	41446007	.	+	.	gene_id "ENSMUSG00000099785.6"; transcript_id "ENSMUST00000190439.1"; gene_type "lincRNA"; gene_name "Gm28425"; transcript_type "lincRNA"; transcript_name "Gm28425-201"; exon_number 1; exon_id "ENSMUSE00001334279.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047839.1"; havana_transcript "OTTMUST00000123097.1";
mm10-chrY	HAVANA	exon	41446495	41446676	.	+	.	gene_id "ENSMUSG00000099785.6"; transcript_id "ENSMUST00000190439.1"; gene_type "lincRNA"; gene_name "Gm28425"; transcript_type "lincRNA"; transcript_name "Gm28425-201"; exon_number 2; exon_id "ENSMUSE00001322830.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047839.1"; havana_transcript "OTTMUST00000123097.1";
mm10-chrY	HAVANA	exon	41448114	41448182	.	+	.	gene_id "ENSMUSG00000099785.6"; transcript_id "ENSMUST00000190439.1"; gene_type "lincRNA"; gene_name "Gm28425"; transcript_type "lincRNA"; transcript_name "Gm28425-201"; exon_number 3; exon_id "ENSMUSE00001323574.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047839.1"; havana_transcript "OTTMUST00000123097.1";
mm10-chrY	HAVANA	gene	41619626	41644054	.	-	.	gene_id "ENSMUSG00000094071.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21729"; level 2; havana_gene "OTTMUSG00000047853.1";
mm10-chrY	HAVANA	transcript	41619626	41644054	.	-	.	gene_id "ENSMUSG00000094071.2"; transcript_id "ENSMUST00000180058.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21729"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21729-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047853.1"; havana_transcript "OTTMUST00000123115.1";
mm10-chrY	HAVANA	exon	41643937	41644054	.	-	.	gene_id "ENSMUSG00000094071.2"; transcript_id "ENSMUST00000180058.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21729"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21729-201"; exon_number 1; exon_id "ENSMUSE00001022097.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047853.1"; havana_transcript "OTTMUST00000123115.1";
mm10-chrY	HAVANA	exon	41638567	41638633	.	-	.	gene_id "ENSMUSG00000094071.2"; transcript_id "ENSMUST00000180058.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21729"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21729-201"; exon_number 2; exon_id "ENSMUSE00000982695.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047853.1"; havana_transcript "OTTMUST00000123115.1";
mm10-chrY	HAVANA	exon	41637983	41638017	.	-	.	gene_id "ENSMUSG00000094071.2"; transcript_id "ENSMUST00000180058.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21729"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21729-201"; exon_number 3; exon_id "ENSMUSE00001048082.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047853.1"; havana_transcript "OTTMUST00000123115.1";
mm10-chrY	HAVANA	exon	41630912	41630978	.	-	.	gene_id "ENSMUSG00000094071.2"; transcript_id "ENSMUST00000180058.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21729"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21729-201"; exon_number 4; exon_id "ENSMUSE00001034353.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047853.1"; havana_transcript "OTTMUST00000123115.1";
mm10-chrY	HAVANA	exon	41630316	41630350	.	-	.	gene_id "ENSMUSG00000094071.2"; transcript_id "ENSMUST00000180058.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21729"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21729-201"; exon_number 5; exon_id "ENSMUSE00000987677.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047853.1"; havana_transcript "OTTMUST00000123115.1";
mm10-chrY	HAVANA	exon	41623016	41623133	.	-	.	gene_id "ENSMUSG00000094071.2"; transcript_id "ENSMUST00000180058.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21729"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21729-201"; exon_number 6; exon_id "ENSMUSE00000963835.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047853.1"; havana_transcript "OTTMUST00000123115.1";
mm10-chrY	HAVANA	exon	41622143	41622242	.	-	.	gene_id "ENSMUSG00000094071.2"; transcript_id "ENSMUST00000180058.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21729"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21729-201"; exon_number 7; exon_id "ENSMUSE00000970260.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047853.1"; havana_transcript "OTTMUST00000123115.1";
mm10-chrY	HAVANA	exon	41620012	41620108	.	-	.	gene_id "ENSMUSG00000094071.2"; transcript_id "ENSMUST00000180058.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21729"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21729-201"; exon_number 8; exon_id "ENSMUSE00001332260.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047853.1"; havana_transcript "OTTMUST00000123115.1";
mm10-chrY	HAVANA	exon	41619626	41619652	.	-	.	gene_id "ENSMUSG00000094071.2"; transcript_id "ENSMUST00000180058.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21729"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21729-201"; exon_number 9; exon_id "ENSMUSE00001319182.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047853.1"; havana_transcript "OTTMUST00000123115.1";
mm10-chrY	HAVANA	gene	41766834	41769112	.	-	.	gene_id "ENSMUSG00000101536.6"; gene_type "lincRNA"; gene_name "Gm28834"; level 2; havana_gene "OTTMUSG00000047854.1";
mm10-chrY	HAVANA	transcript	41766834	41769112	.	-	.	gene_id "ENSMUSG00000101536.6"; transcript_id "ENSMUST00000190714.5"; gene_type "lincRNA"; gene_name "Gm28834"; transcript_type "lincRNA"; transcript_name "Gm28834-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047854.1"; havana_transcript "OTTMUST00000123116.1";
mm10-chrY	HAVANA	exon	41769012	41769112	.	-	.	gene_id "ENSMUSG00000101536.6"; transcript_id "ENSMUST00000190714.5"; gene_type "lincRNA"; gene_name "Gm28834"; transcript_type "lincRNA"; transcript_name "Gm28834-202"; exon_number 1; exon_id "ENSMUSE00001333524.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047854.1"; havana_transcript "OTTMUST00000123116.1";
mm10-chrY	HAVANA	exon	41768343	41768524	.	-	.	gene_id "ENSMUSG00000101536.6"; transcript_id "ENSMUST00000190714.5"; gene_type "lincRNA"; gene_name "Gm28834"; transcript_type "lincRNA"; transcript_name "Gm28834-202"; exon_number 2; exon_id "ENSMUSE00001334612.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047854.1"; havana_transcript "OTTMUST00000123116.1";
mm10-chrY	HAVANA	exon	41767431	41767615	.	-	.	gene_id "ENSMUSG00000101536.6"; transcript_id "ENSMUST00000190714.5"; gene_type "lincRNA"; gene_name "Gm28834"; transcript_type "lincRNA"; transcript_name "Gm28834-202"; exon_number 3; exon_id "ENSMUSE00001334718.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047854.1"; havana_transcript "OTTMUST00000123116.1";
mm10-chrY	HAVANA	exon	41766834	41766902	.	-	.	gene_id "ENSMUSG00000101536.6"; transcript_id "ENSMUST00000190714.5"; gene_type "lincRNA"; gene_name "Gm28834"; transcript_type "lincRNA"; transcript_name "Gm28834-202"; exon_number 4; exon_id "ENSMUSE00001328614.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047854.1"; havana_transcript "OTTMUST00000123116.1";
mm10-chrY	HAVANA	transcript	41766834	41769112	.	-	.	gene_id "ENSMUSG00000101536.6"; transcript_id "ENSMUST00000187847.2"; gene_type "lincRNA"; gene_name "Gm28834"; transcript_type "lincRNA"; transcript_name "Gm28834-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047854.1"; havana_transcript "OTTMUST00000123117.1";
mm10-chrY	HAVANA	exon	41769012	41769112	.	-	.	gene_id "ENSMUSG00000101536.6"; transcript_id "ENSMUST00000187847.2"; gene_type "lincRNA"; gene_name "Gm28834"; transcript_type "lincRNA"; transcript_name "Gm28834-201"; exon_number 1; exon_id "ENSMUSE00001333524.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047854.1"; havana_transcript "OTTMUST00000123117.1";
mm10-chrY	HAVANA	exon	41768343	41768524	.	-	.	gene_id "ENSMUSG00000101536.6"; transcript_id "ENSMUST00000187847.2"; gene_type "lincRNA"; gene_name "Gm28834"; transcript_type "lincRNA"; transcript_name "Gm28834-201"; exon_number 2; exon_id "ENSMUSE00001334612.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047854.1"; havana_transcript "OTTMUST00000123117.1";
mm10-chrY	HAVANA	exon	41766834	41766902	.	-	.	gene_id "ENSMUSG00000101536.6"; transcript_id "ENSMUST00000187847.2"; gene_type "lincRNA"; gene_name "Gm28834"; transcript_type "lincRNA"; transcript_name "Gm28834-201"; exon_number 3; exon_id "ENSMUSE00001328614.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047854.1"; havana_transcript "OTTMUST00000123117.1";
mm10-chrY	HAVANA	gene	41835327	41835885	.	+	.	gene_id "ENSMUSG00000099652.1"; gene_type "processed_pseudogene"; gene_name "Gm28833"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047855.1";
mm10-chrY	HAVANA	transcript	41835327	41835885	.	+	.	gene_id "ENSMUSG00000099652.1"; transcript_id "ENSMUST00000189671.1"; gene_type "processed_pseudogene"; gene_name "Gm28833"; transcript_type "processed_pseudogene"; transcript_name "Gm28833-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047855.1"; havana_transcript "OTTMUST00000123118.1";
mm10-chrY	HAVANA	exon	41835327	41835885	.	+	.	gene_id "ENSMUSG00000099652.1"; transcript_id "ENSMUST00000189671.1"; gene_type "processed_pseudogene"; gene_name "Gm28833"; transcript_type "processed_pseudogene"; transcript_name "Gm28833-201"; exon_number 1; exon_id "ENSMUSE00001319730.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047855.1"; havana_transcript "OTTMUST00000123118.1";
mm10-chrY	HAVANA	gene	42079731	42080426	.	-	.	gene_id "ENSMUSG00000100737.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21774"; level 2; havana_gene "OTTMUSG00000047856.1";
mm10-chrY	HAVANA	transcript	42079731	42080426	.	-	.	gene_id "ENSMUSG00000100737.1"; transcript_id "ENSMUST00000191592.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21774"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21774-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047856.1"; havana_transcript "OTTMUST00000123119.1";
mm10-chrY	HAVANA	exon	42079731	42080426	.	-	.	gene_id "ENSMUSG00000100737.1"; transcript_id "ENSMUST00000191592.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21774"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21774-201"; exon_number 1; exon_id "ENSMUSE00001321202.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047856.1"; havana_transcript "OTTMUST00000123119.1";
mm10-chrY	HAVANA	gene	42141555	42144786	.	+	.	gene_id "ENSMUSG00000099780.1"; gene_type "lincRNA"; gene_name "Gm29537"; level 2; havana_gene "OTTMUSG00000047857.1";
mm10-chrY	HAVANA	transcript	42141555	42144786	.	+	.	gene_id "ENSMUSG00000099780.1"; transcript_id "ENSMUST00000186153.1"; gene_type "lincRNA"; gene_name "Gm29537"; transcript_type "lincRNA"; transcript_name "Gm29537-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047857.1"; havana_transcript "OTTMUST00000123120.1";
mm10-chrY	HAVANA	exon	42141555	42142193	.	+	.	gene_id "ENSMUSG00000099780.1"; transcript_id "ENSMUST00000186153.1"; gene_type "lincRNA"; gene_name "Gm29537"; transcript_type "lincRNA"; transcript_name "Gm29537-202"; exon_number 1; exon_id "ENSMUSE00001320409.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047857.1"; havana_transcript "OTTMUST00000123120.1";
mm10-chrY	HAVANA	exon	42142677	42142862	.	+	.	gene_id "ENSMUSG00000099780.1"; transcript_id "ENSMUST00000186153.1"; gene_type "lincRNA"; gene_name "Gm29537"; transcript_type "lincRNA"; transcript_name "Gm29537-202"; exon_number 2; exon_id "ENSMUSE00001321078.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047857.1"; havana_transcript "OTTMUST00000123120.1";
mm10-chrY	HAVANA	exon	42143587	42143770	.	+	.	gene_id "ENSMUSG00000099780.1"; transcript_id "ENSMUST00000186153.1"; gene_type "lincRNA"; gene_name "Gm29537"; transcript_type "lincRNA"; transcript_name "Gm29537-202"; exon_number 3; exon_id "ENSMUSE00001333198.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047857.1"; havana_transcript "OTTMUST00000123120.1";
mm10-chrY	HAVANA	exon	42144298	42144786	.	+	.	gene_id "ENSMUSG00000099780.1"; transcript_id "ENSMUST00000186153.1"; gene_type "lincRNA"; gene_name "Gm29537"; transcript_type "lincRNA"; transcript_name "Gm29537-202"; exon_number 4; exon_id "ENSMUSE00001327309.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047857.1"; havana_transcript "OTTMUST00000123120.1";
mm10-chrY	HAVANA	transcript	42142008	42144366	.	+	.	gene_id "ENSMUSG00000099780.1"; transcript_id "ENSMUST00000185274.1"; gene_type "lincRNA"; gene_name "Gm29537"; transcript_type "lincRNA"; transcript_name "Gm29537-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000047857.1"; havana_transcript "OTTMUST00000123121.1";
mm10-chrY	HAVANA	exon	42142008	42142193	.	+	.	gene_id "ENSMUSG00000099780.1"; transcript_id "ENSMUST00000185274.1"; gene_type "lincRNA"; gene_name "Gm29537"; transcript_type "lincRNA"; transcript_name "Gm29537-201"; exon_number 1; exon_id "ENSMUSE00001333132.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000047857.1"; havana_transcript "OTTMUST00000123121.1";
mm10-chrY	HAVANA	exon	42142681	42142862	.	+	.	gene_id "ENSMUSG00000099780.1"; transcript_id "ENSMUST00000185274.1"; gene_type "lincRNA"; gene_name "Gm29537"; transcript_type "lincRNA"; transcript_name "Gm29537-201"; exon_number 2; exon_id "ENSMUSE00001334890.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000047857.1"; havana_transcript "OTTMUST00000123121.1";
mm10-chrY	HAVANA	exon	42144298	42144366	.	+	.	gene_id "ENSMUSG00000099780.1"; transcript_id "ENSMUST00000185274.1"; gene_type "lincRNA"; gene_name "Gm29537"; transcript_type "lincRNA"; transcript_name "Gm29537-201"; exon_number 3; exon_id "ENSMUSE00001323365.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000047857.1"; havana_transcript "OTTMUST00000123121.1";
mm10-chrY	HAVANA	gene	42459558	42462795	.	-	.	gene_id "ENSMUSG00000099849.1"; gene_type "lincRNA"; gene_name "Gm29274"; level 2; havana_gene "OTTMUSG00000047937.1";
mm10-chrY	HAVANA	transcript	42459558	42462795	.	-	.	gene_id "ENSMUSG00000099849.1"; transcript_id "ENSMUST00000188814.1"; gene_type "lincRNA"; gene_name "Gm29274"; transcript_type "lincRNA"; transcript_name "Gm29274-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047937.1"; havana_transcript "OTTMUST00000123269.1";
mm10-chrY	HAVANA	exon	42462157	42462795	.	-	.	gene_id "ENSMUSG00000099849.1"; transcript_id "ENSMUST00000188814.1"; gene_type "lincRNA"; gene_name "Gm29274"; transcript_type "lincRNA"; transcript_name "Gm29274-202"; exon_number 1; exon_id "ENSMUSE00001331090.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047937.1"; havana_transcript "OTTMUST00000123269.1";
mm10-chrY	HAVANA	exon	42461488	42461673	.	-	.	gene_id "ENSMUSG00000099849.1"; transcript_id "ENSMUST00000188814.1"; gene_type "lincRNA"; gene_name "Gm29274"; transcript_type "lincRNA"; transcript_name "Gm29274-202"; exon_number 2; exon_id "ENSMUSE00001325338.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047937.1"; havana_transcript "OTTMUST00000123269.1";
mm10-chrY	HAVANA	exon	42460575	42460758	.	-	.	gene_id "ENSMUSG00000099849.1"; transcript_id "ENSMUST00000188814.1"; gene_type "lincRNA"; gene_name "Gm29274"; transcript_type "lincRNA"; transcript_name "Gm29274-202"; exon_number 3; exon_id "ENSMUSE00001333712.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047937.1"; havana_transcript "OTTMUST00000123269.1";
mm10-chrY	HAVANA	exon	42459558	42460046	.	-	.	gene_id "ENSMUSG00000099849.1"; transcript_id "ENSMUST00000188814.1"; gene_type "lincRNA"; gene_name "Gm29274"; transcript_type "lincRNA"; transcript_name "Gm29274-202"; exon_number 4; exon_id "ENSMUSE00001333971.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047937.1"; havana_transcript "OTTMUST00000123269.1";
mm10-chrY	HAVANA	transcript	42459978	42462342	.	-	.	gene_id "ENSMUSG00000099849.1"; transcript_id "ENSMUST00000188644.1"; gene_type "lincRNA"; gene_name "Gm29274"; transcript_type "lincRNA"; transcript_name "Gm29274-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047937.1"; havana_transcript "OTTMUST00000123270.1";
mm10-chrY	HAVANA	exon	42462157	42462342	.	-	.	gene_id "ENSMUSG00000099849.1"; transcript_id "ENSMUST00000188644.1"; gene_type "lincRNA"; gene_name "Gm29274"; transcript_type "lincRNA"; transcript_name "Gm29274-201"; exon_number 1; exon_id "ENSMUSE00001326495.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047937.1"; havana_transcript "OTTMUST00000123270.1";
mm10-chrY	HAVANA	exon	42461488	42461669	.	-	.	gene_id "ENSMUSG00000099849.1"; transcript_id "ENSMUST00000188644.1"; gene_type "lincRNA"; gene_name "Gm29274"; transcript_type "lincRNA"; transcript_name "Gm29274-201"; exon_number 2; exon_id "ENSMUSE00001327499.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047937.1"; havana_transcript "OTTMUST00000123270.1";
mm10-chrY	HAVANA	exon	42459978	42460046	.	-	.	gene_id "ENSMUSG00000099849.1"; transcript_id "ENSMUST00000188644.1"; gene_type "lincRNA"; gene_name "Gm29274"; transcript_type "lincRNA"; transcript_name "Gm29274-201"; exon_number 3; exon_id "ENSMUSE00001323545.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047937.1"; havana_transcript "OTTMUST00000123270.1";
mm10-chrY	HAVANA	gene	42487644	42490878	.	-	.	gene_id "ENSMUSG00000100822.1"; gene_type "lincRNA"; gene_name "Gm29275"; level 2; havana_gene "OTTMUSG00000047938.1";
mm10-chrY	HAVANA	transcript	42487644	42490878	.	-	.	gene_id "ENSMUSG00000100822.1"; transcript_id "ENSMUST00000189475.1"; gene_type "lincRNA"; gene_name "Gm29275"; transcript_type "lincRNA"; transcript_name "Gm29275-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047938.1"; havana_transcript "OTTMUST00000123271.1";
mm10-chrY	HAVANA	exon	42490242	42490878	.	-	.	gene_id "ENSMUSG00000100822.1"; transcript_id "ENSMUST00000189475.1"; gene_type "lincRNA"; gene_name "Gm29275"; transcript_type "lincRNA"; transcript_name "Gm29275-202"; exon_number 1; exon_id "ENSMUSE00001322322.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047938.1"; havana_transcript "OTTMUST00000123271.1";
mm10-chrY	HAVANA	exon	42489575	42489757	.	-	.	gene_id "ENSMUSG00000100822.1"; transcript_id "ENSMUST00000189475.1"; gene_type "lincRNA"; gene_name "Gm29275"; transcript_type "lincRNA"; transcript_name "Gm29275-202"; exon_number 2; exon_id "ENSMUSE00001319352.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047938.1"; havana_transcript "OTTMUST00000123271.1";
mm10-chrY	HAVANA	exon	42488661	42488844	.	-	.	gene_id "ENSMUSG00000100822.1"; transcript_id "ENSMUST00000189475.1"; gene_type "lincRNA"; gene_name "Gm29275"; transcript_type "lincRNA"; transcript_name "Gm29275-202"; exon_number 3; exon_id "ENSMUSE00001332147.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047938.1"; havana_transcript "OTTMUST00000123271.1";
mm10-chrY	HAVANA	exon	42487644	42488133	.	-	.	gene_id "ENSMUSG00000100822.1"; transcript_id "ENSMUST00000189475.1"; gene_type "lincRNA"; gene_name "Gm29275"; transcript_type "lincRNA"; transcript_name "Gm29275-202"; exon_number 4; exon_id "ENSMUSE00001329552.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047938.1"; havana_transcript "OTTMUST00000123271.1";
mm10-chrY	HAVANA	transcript	42488068	42490427	.	-	.	gene_id "ENSMUSG00000100822.1"; transcript_id "ENSMUST00000188940.1"; gene_type "lincRNA"; gene_name "Gm29275"; transcript_type "lincRNA"; transcript_name "Gm29275-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047938.1"; havana_transcript "OTTMUST00000123272.1";
mm10-chrY	HAVANA	exon	42490242	42490427	.	-	.	gene_id "ENSMUSG00000100822.1"; transcript_id "ENSMUST00000188940.1"; gene_type "lincRNA"; gene_name "Gm29275"; transcript_type "lincRNA"; transcript_name "Gm29275-201"; exon_number 1; exon_id "ENSMUSE00001330787.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047938.1"; havana_transcript "OTTMUST00000123272.1";
mm10-chrY	HAVANA	exon	42489575	42489753	.	-	.	gene_id "ENSMUSG00000100822.1"; transcript_id "ENSMUST00000188940.1"; gene_type "lincRNA"; gene_name "Gm29275"; transcript_type "lincRNA"; transcript_name "Gm29275-201"; exon_number 2; exon_id "ENSMUSE00001321618.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047938.1"; havana_transcript "OTTMUST00000123272.1";
mm10-chrY	HAVANA	exon	42488068	42488133	.	-	.	gene_id "ENSMUSG00000100822.1"; transcript_id "ENSMUST00000188940.1"; gene_type "lincRNA"; gene_name "Gm29275"; transcript_type "lincRNA"; transcript_name "Gm29275-201"; exon_number 3; exon_id "ENSMUSE00001326256.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047938.1"; havana_transcript "OTTMUST00000123272.1";
mm10-chrY	HAVANA	gene	42550083	42582250	.	-	.	gene_id "ENSMUSG00000101471.1"; gene_type "protein_coding"; gene_name "Gm29276"; level 2; havana_gene "OTTMUSG00000047939.1";
mm10-chrY	HAVANA	transcript	42550083	42582250	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	exon	42582207	42582250	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 1; exon_id "ENSMUSE00001332819.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	exon	42580718	42580849	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 2; exon_id "ENSMUSE00001334432.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	CDS	42580718	42580835	.	-	0	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 2; exon_id "ENSMUSE00001334432.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	start_codon	42580833	42580835	.	-	0	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 2; exon_id "ENSMUSE00001334432.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	exon	42569158	42569224	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 3; exon_id "ENSMUSE00001323520.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	CDS	42569158	42569224	.	-	2	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 3; exon_id "ENSMUSE00001323520.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	exon	42568581	42568615	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 4; exon_id "ENSMUSE00001321741.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	CDS	42568581	42568615	.	-	1	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 4; exon_id "ENSMUSE00001321741.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	exon	42561480	42561546	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 5; exon_id "ENSMUSE00001324010.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	CDS	42561480	42561546	.	-	2	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 5; exon_id "ENSMUSE00001324010.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	exon	42560878	42560912	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 6; exon_id "ENSMUSE00001324932.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	CDS	42560878	42560912	.	-	1	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 6; exon_id "ENSMUSE00001324932.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	exon	42553633	42553750	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 7; exon_id "ENSMUSE00001325419.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	CDS	42553633	42553750	.	-	2	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 7; exon_id "ENSMUSE00001325419.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	exon	42552792	42552891	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 8; exon_id "ENSMUSE00001332348.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	CDS	42552792	42552891	.	-	1	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 8; exon_id "ENSMUSE00001332348.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	exon	42550676	42550774	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 9; exon_id "ENSMUSE00001323755.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	CDS	42550676	42550774	.	-	0	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 9; exon_id "ENSMUSE00001323755.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	exon	42550083	42550317	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 10; exon_id "ENSMUSE00001325148.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	CDS	42550291	42550317	.	-	0	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 10; exon_id "ENSMUSE00001325148.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	stop_codon	42550288	42550290	.	-	0	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 10; exon_id "ENSMUSE00001325148.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	UTR	42582207	42582250	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 1; exon_id "ENSMUSE00001332819.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	UTR	42580836	42580849	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 2; exon_id "ENSMUSE00001334432.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	UTR	42550083	42550290	.	-	.	gene_id "ENSMUSG00000101471.1"; transcript_id "ENSMUST00000190453.1"; gene_type "protein_coding"; gene_name "Gm29276"; transcript_type "protein_coding"; transcript_name "Gm29276-201"; exon_number 10; exon_id "ENSMUSE00001325148.1"; level 2; protein_id "ENSMUSP00000139523.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047939.1"; havana_transcript "OTTMUST00000123273.1";
mm10-chrY	HAVANA	gene	42735352	42736047	.	-	.	gene_id "ENSMUSG00000101455.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21805"; level 2; havana_gene "OTTMUSG00000047940.1";
mm10-chrY	HAVANA	transcript	42735352	42736047	.	-	.	gene_id "ENSMUSG00000101455.1"; transcript_id "ENSMUST00000190371.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21805"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21805-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047940.1"; havana_transcript "OTTMUST00000123274.1";
mm10-chrY	HAVANA	exon	42735352	42736047	.	-	.	gene_id "ENSMUSG00000101455.1"; transcript_id "ENSMUST00000190371.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21805"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21805-201"; exon_number 1; exon_id "ENSMUSE00001324334.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047940.1"; havana_transcript "OTTMUST00000123274.1";
mm10-chrY	HAVANA	gene	42770805	42771332	.	+	.	gene_id "ENSMUSG00000099700.1"; gene_type "lincRNA"; gene_name "Gm29645"; level 2; havana_gene "OTTMUSG00000047941.1";
mm10-chrY	HAVANA	transcript	42770805	42771332	.	+	.	gene_id "ENSMUSG00000099700.1"; transcript_id "ENSMUST00000189117.1"; gene_type "lincRNA"; gene_name "Gm29645"; transcript_type "lincRNA"; transcript_name "Gm29645-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047941.1"; havana_transcript "OTTMUST00000123275.1";
mm10-chrY	HAVANA	exon	42770805	42770909	.	+	.	gene_id "ENSMUSG00000099700.1"; transcript_id "ENSMUST00000189117.1"; gene_type "lincRNA"; gene_name "Gm29645"; transcript_type "lincRNA"; transcript_name "Gm29645-201"; exon_number 1; exon_id "ENSMUSE00001322147.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047941.1"; havana_transcript "OTTMUST00000123275.1";
mm10-chrY	HAVANA	exon	42771264	42771332	.	+	.	gene_id "ENSMUSG00000099700.1"; transcript_id "ENSMUST00000189117.1"; gene_type "lincRNA"; gene_name "Gm29645"; transcript_type "lincRNA"; transcript_name "Gm29645-201"; exon_number 2; exon_id "ENSMUSE00001322749.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047941.1"; havana_transcript "OTTMUST00000123275.1";
mm10-chrY	HAVANA	gene	42833153	42833680	.	+	.	gene_id "ENSMUSG00000101811.1"; gene_type "lincRNA"; gene_name "Gm28312"; level 2; havana_gene "OTTMUSG00000047942.1";
mm10-chrY	HAVANA	transcript	42833153	42833680	.	+	.	gene_id "ENSMUSG00000101811.1"; transcript_id "ENSMUST00000185976.1"; gene_type "lincRNA"; gene_name "Gm28312"; transcript_type "lincRNA"; transcript_name "Gm28312-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047942.1"; havana_transcript "OTTMUST00000123276.1";
mm10-chrY	HAVANA	exon	42833153	42833257	.	+	.	gene_id "ENSMUSG00000101811.1"; transcript_id "ENSMUST00000185976.1"; gene_type "lincRNA"; gene_name "Gm28312"; transcript_type "lincRNA"; transcript_name "Gm28312-201"; exon_number 1; exon_id "ENSMUSE00001324510.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047942.1"; havana_transcript "OTTMUST00000123276.1";
mm10-chrY	HAVANA	exon	42833612	42833680	.	+	.	gene_id "ENSMUSG00000101811.1"; transcript_id "ENSMUST00000185976.1"; gene_type "lincRNA"; gene_name "Gm28312"; transcript_type "lincRNA"; transcript_name "Gm28312-201"; exon_number 2; exon_id "ENSMUSE00001331883.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047942.1"; havana_transcript "OTTMUST00000123276.1";
mm10-chrY	HAVANA	gene	42931751	42956150	.	+	.	gene_id "ENSMUSG00000099833.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29165"; level 2; havana_gene "OTTMUSG00000047983.1";
mm10-chrY	HAVANA	transcript	42931751	42956150	.	+	.	gene_id "ENSMUSG00000099833.1"; transcript_id "ENSMUST00000190655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29165-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047983.1"; havana_transcript "OTTMUST00000123358.1";
mm10-chrY	HAVANA	exon	42931751	42931868	.	+	.	gene_id "ENSMUSG00000099833.1"; transcript_id "ENSMUST00000190655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29165-201"; exon_number 1; exon_id "ENSMUSE00001322584.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047983.1"; havana_transcript "OTTMUST00000123358.1";
mm10-chrY	HAVANA	exon	42937178	42937244	.	+	.	gene_id "ENSMUSG00000099833.1"; transcript_id "ENSMUST00000190655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29165-201"; exon_number 2; exon_id "ENSMUSE00001326233.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047983.1"; havana_transcript "OTTMUST00000123358.1";
mm10-chrY	HAVANA	exon	42937830	42937864	.	+	.	gene_id "ENSMUSG00000099833.1"; transcript_id "ENSMUST00000190655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29165-201"; exon_number 3; exon_id "ENSMUSE00001332388.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047983.1"; havana_transcript "OTTMUST00000123358.1";
mm10-chrY	HAVANA	exon	42944875	42944941	.	+	.	gene_id "ENSMUSG00000099833.1"; transcript_id "ENSMUST00000190655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29165-201"; exon_number 4; exon_id "ENSMUSE00001330051.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047983.1"; havana_transcript "OTTMUST00000123358.1";
mm10-chrY	HAVANA	exon	42945506	42945540	.	+	.	gene_id "ENSMUSG00000099833.1"; transcript_id "ENSMUST00000190655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29165-201"; exon_number 5; exon_id "ENSMUSE00001333326.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047983.1"; havana_transcript "OTTMUST00000123358.1";
mm10-chrY	HAVANA	exon	42952682	42952799	.	+	.	gene_id "ENSMUSG00000099833.1"; transcript_id "ENSMUST00000190655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29165-201"; exon_number 6; exon_id "ENSMUSE00001335423.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047983.1"; havana_transcript "OTTMUST00000123358.1";
mm10-chrY	HAVANA	exon	42953546	42953645	.	+	.	gene_id "ENSMUSG00000099833.1"; transcript_id "ENSMUST00000190655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29165-201"; exon_number 7; exon_id "ENSMUSE00001323476.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047983.1"; havana_transcript "OTTMUST00000123358.1";
mm10-chrY	HAVANA	exon	42955668	42955764	.	+	.	gene_id "ENSMUSG00000099833.1"; transcript_id "ENSMUST00000190655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29165-201"; exon_number 8; exon_id "ENSMUSE00001320267.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047983.1"; havana_transcript "OTTMUST00000123358.1";
mm10-chrY	HAVANA	exon	42956124	42956150	.	+	.	gene_id "ENSMUSG00000099833.1"; transcript_id "ENSMUST00000190655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29165-201"; exon_number 9; exon_id "ENSMUSE00001322729.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047983.1"; havana_transcript "OTTMUST00000123358.1";
mm10-chrY	HAVANA	gene	42975149	42975595	.	+	.	gene_id "ENSMUSG00000101247.1"; gene_type "lincRNA"; gene_name "Gm29042"; level 2; havana_gene "OTTMUSG00000047943.1";
mm10-chrY	HAVANA	transcript	42975149	42975595	.	+	.	gene_id "ENSMUSG00000101247.1"; transcript_id "ENSMUST00000191564.1"; gene_type "lincRNA"; gene_name "Gm29042"; transcript_type "lincRNA"; transcript_name "Gm29042-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047943.1"; havana_transcript "OTTMUST00000123277.1";
mm10-chrY	HAVANA	exon	42975149	42975253	.	+	.	gene_id "ENSMUSG00000101247.1"; transcript_id "ENSMUST00000191564.1"; gene_type "lincRNA"; gene_name "Gm29042"; transcript_type "lincRNA"; transcript_name "Gm29042-201"; exon_number 1; exon_id "ENSMUSE00001335644.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047943.1"; havana_transcript "OTTMUST00000123277.1";
mm10-chrY	HAVANA	exon	42975535	42975595	.	+	.	gene_id "ENSMUSG00000101247.1"; transcript_id "ENSMUST00000191564.1"; gene_type "lincRNA"; gene_name "Gm29042"; transcript_type "lincRNA"; transcript_name "Gm29042-201"; exon_number 2; exon_id "ENSMUSE00001332325.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047943.1"; havana_transcript "OTTMUST00000123277.1";
mm10-chrY	HAVANA	gene	43047510	43050744	.	-	.	gene_id "ENSMUSG00000099408.1"; gene_type "lincRNA"; gene_name "Gm28311"; level 2; havana_gene "OTTMUSG00000047944.1";
mm10-chrY	HAVANA	transcript	43047510	43050744	.	-	.	gene_id "ENSMUSG00000099408.1"; transcript_id "ENSMUST00000185236.1"; gene_type "lincRNA"; gene_name "Gm28311"; transcript_type "lincRNA"; transcript_name "Gm28311-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047944.1"; havana_transcript "OTTMUST00000123278.1";
mm10-chrY	HAVANA	exon	43050107	43050744	.	-	.	gene_id "ENSMUSG00000099408.1"; transcript_id "ENSMUST00000185236.1"; gene_type "lincRNA"; gene_name "Gm28311"; transcript_type "lincRNA"; transcript_name "Gm28311-201"; exon_number 1; exon_id "ENSMUSE00001331566.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047944.1"; havana_transcript "OTTMUST00000123278.1";
mm10-chrY	HAVANA	exon	43049438	43049623	.	-	.	gene_id "ENSMUSG00000099408.1"; transcript_id "ENSMUST00000185236.1"; gene_type "lincRNA"; gene_name "Gm28311"; transcript_type "lincRNA"; transcript_name "Gm28311-201"; exon_number 2; exon_id "ENSMUSE00001321499.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047944.1"; havana_transcript "OTTMUST00000123278.1";
mm10-chrY	HAVANA	exon	43048527	43048710	.	-	.	gene_id "ENSMUSG00000099408.1"; transcript_id "ENSMUST00000185236.1"; gene_type "lincRNA"; gene_name "Gm28311"; transcript_type "lincRNA"; transcript_name "Gm28311-201"; exon_number 3; exon_id "ENSMUSE00001333168.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047944.1"; havana_transcript "OTTMUST00000123278.1";
mm10-chrY	HAVANA	exon	43047510	43047998	.	-	.	gene_id "ENSMUSG00000099408.1"; transcript_id "ENSMUST00000185236.1"; gene_type "lincRNA"; gene_name "Gm28311"; transcript_type "lincRNA"; transcript_name "Gm28311-201"; exon_number 4; exon_id "ENSMUSE00001333761.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047944.1"; havana_transcript "OTTMUST00000123278.1";
mm10-chrY	HAVANA	transcript	43047930	43050291	.	-	.	gene_id "ENSMUSG00000099408.1"; transcript_id "ENSMUST00000189442.1"; gene_type "lincRNA"; gene_name "Gm28311"; transcript_type "lincRNA"; transcript_name "Gm28311-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047944.1"; havana_transcript "OTTMUST00000123279.1";
mm10-chrY	HAVANA	exon	43050107	43050291	.	-	.	gene_id "ENSMUSG00000099408.1"; transcript_id "ENSMUST00000189442.1"; gene_type "lincRNA"; gene_name "Gm28311"; transcript_type "lincRNA"; transcript_name "Gm28311-202"; exon_number 1; exon_id "ENSMUSE00001322176.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047944.1"; havana_transcript "OTTMUST00000123279.1";
mm10-chrY	HAVANA	exon	43049438	43049619	.	-	.	gene_id "ENSMUSG00000099408.1"; transcript_id "ENSMUST00000189442.1"; gene_type "lincRNA"; gene_name "Gm28311"; transcript_type "lincRNA"; transcript_name "Gm28311-202"; exon_number 2; exon_id "ENSMUSE00001325801.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047944.1"; havana_transcript "OTTMUST00000123279.1";
mm10-chrY	HAVANA	exon	43047930	43047998	.	-	.	gene_id "ENSMUSG00000099408.1"; transcript_id "ENSMUST00000189442.1"; gene_type "lincRNA"; gene_name "Gm28311"; transcript_type "lincRNA"; transcript_name "Gm28311-202"; exon_number 3; exon_id "ENSMUSE00001318236.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047944.1"; havana_transcript "OTTMUST00000123279.1";
mm10-chrY	HAVANA	gene	43076399	43079631	.	-	.	gene_id "ENSMUSG00000101207.1"; gene_type "lincRNA"; gene_name "Gm28310"; level 2; havana_gene "OTTMUSG00000047945.2";
mm10-chrY	HAVANA	transcript	43076399	43079631	.	-	.	gene_id "ENSMUSG00000101207.1"; transcript_id "ENSMUST00000191136.1"; gene_type "lincRNA"; gene_name "Gm28310"; transcript_type "lincRNA"; transcript_name "Gm28310-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047945.2"; havana_transcript "OTTMUST00000123280.1";
mm10-chrY	HAVANA	exon	43078993	43079631	.	-	.	gene_id "ENSMUSG00000101207.1"; transcript_id "ENSMUST00000191136.1"; gene_type "lincRNA"; gene_name "Gm28310"; transcript_type "lincRNA"; transcript_name "Gm28310-202"; exon_number 1; exon_id "ENSMUSE00001334570.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047945.2"; havana_transcript "OTTMUST00000123280.1";
mm10-chrY	HAVANA	exon	43078326	43078508	.	-	.	gene_id "ENSMUSG00000101207.1"; transcript_id "ENSMUST00000191136.1"; gene_type "lincRNA"; gene_name "Gm28310"; transcript_type "lincRNA"; transcript_name "Gm28310-202"; exon_number 2; exon_id "ENSMUSE00001332261.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047945.2"; havana_transcript "OTTMUST00000123280.1";
mm10-chrY	HAVANA	exon	43077416	43077596	.	-	.	gene_id "ENSMUSG00000101207.1"; transcript_id "ENSMUST00000191136.1"; gene_type "lincRNA"; gene_name "Gm28310"; transcript_type "lincRNA"; transcript_name "Gm28310-202"; exon_number 3; exon_id "ENSMUSE00001333542.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047945.2"; havana_transcript "OTTMUST00000123280.1";
mm10-chrY	HAVANA	exon	43076399	43076888	.	-	.	gene_id "ENSMUSG00000101207.1"; transcript_id "ENSMUST00000191136.1"; gene_type "lincRNA"; gene_name "Gm28310"; transcript_type "lincRNA"; transcript_name "Gm28310-202"; exon_number 4; exon_id "ENSMUSE00001328970.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047945.2"; havana_transcript "OTTMUST00000123280.1";
mm10-chrY	HAVANA	transcript	43076823	43079178	.	-	.	gene_id "ENSMUSG00000101207.1"; transcript_id "ENSMUST00000189637.1"; gene_type "lincRNA"; gene_name "Gm28310"; transcript_type "lincRNA"; transcript_name "Gm28310-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047945.2"; havana_transcript "OTTMUST00000123343.1";
mm10-chrY	HAVANA	exon	43078993	43079178	.	-	.	gene_id "ENSMUSG00000101207.1"; transcript_id "ENSMUST00000189637.1"; gene_type "lincRNA"; gene_name "Gm28310"; transcript_type "lincRNA"; transcript_name "Gm28310-201"; exon_number 1; exon_id "ENSMUSE00001323858.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047945.2"; havana_transcript "OTTMUST00000123343.1";
mm10-chrY	HAVANA	exon	43078326	43078504	.	-	.	gene_id "ENSMUSG00000101207.1"; transcript_id "ENSMUST00000189637.1"; gene_type "lincRNA"; gene_name "Gm28310"; transcript_type "lincRNA"; transcript_name "Gm28310-201"; exon_number 2; exon_id "ENSMUSE00001329814.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047945.2"; havana_transcript "OTTMUST00000123343.1";
mm10-chrY	HAVANA	exon	43076823	43076888	.	-	.	gene_id "ENSMUSG00000101207.1"; transcript_id "ENSMUST00000189637.1"; gene_type "lincRNA"; gene_name "Gm28310"; transcript_type "lincRNA"; transcript_name "Gm28310-201"; exon_number 3; exon_id "ENSMUSE00001335688.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047945.2"; havana_transcript "OTTMUST00000123343.1";
mm10-chrY	HAVANA	gene	43141302	43171776	.	-	.	gene_id "ENSMUSG00000099542.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28504"; level 2; havana_gene "OTTMUSG00000047975.2";
mm10-chrY	HAVANA	transcript	43141302	43171776	.	-	.	gene_id "ENSMUSG00000099542.1"; transcript_id "ENSMUST00000190977.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28504"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28504-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047975.2"; havana_transcript "OTTMUST00000123344.2";
mm10-chrY	HAVANA	exon	43171659	43171776	.	-	.	gene_id "ENSMUSG00000099542.1"; transcript_id "ENSMUST00000190977.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28504"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28504-201"; exon_number 1; exon_id "ENSMUSE00001330201.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047975.2"; havana_transcript "OTTMUST00000123344.2";
mm10-chrY	HAVANA	exon	43160198	43160264	.	-	.	gene_id "ENSMUSG00000099542.1"; transcript_id "ENSMUST00000190977.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28504"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28504-201"; exon_number 2; exon_id "ENSMUSE00001330535.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047975.2"; havana_transcript "OTTMUST00000123344.2";
mm10-chrY	HAVANA	exon	43159611	43159645	.	-	.	gene_id "ENSMUSG00000099542.1"; transcript_id "ENSMUST00000190977.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28504"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28504-201"; exon_number 3; exon_id "ENSMUSE00001319339.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047975.2"; havana_transcript "OTTMUST00000123344.2";
mm10-chrY	HAVANA	exon	43152479	43152545	.	-	.	gene_id "ENSMUSG00000099542.1"; transcript_id "ENSMUST00000190977.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28504"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28504-201"; exon_number 4; exon_id "ENSMUSE00001325369.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047975.2"; havana_transcript "OTTMUST00000123344.2";
mm10-chrY	HAVANA	exon	43151884	43151918	.	-	.	gene_id "ENSMUSG00000099542.1"; transcript_id "ENSMUST00000190977.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28504"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28504-201"; exon_number 5; exon_id "ENSMUSE00001326416.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047975.2"; havana_transcript "OTTMUST00000123344.2";
mm10-chrY	HAVANA	exon	43144648	43144765	.	-	.	gene_id "ENSMUSG00000099542.1"; transcript_id "ENSMUST00000190977.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28504"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28504-201"; exon_number 6; exon_id "ENSMUSE00001327235.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047975.2"; havana_transcript "OTTMUST00000123344.2";
mm10-chrY	HAVANA	exon	43143799	43143898	.	-	.	gene_id "ENSMUSG00000099542.1"; transcript_id "ENSMUST00000190977.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28504"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28504-201"; exon_number 7; exon_id "ENSMUSE00001334903.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047975.2"; havana_transcript "OTTMUST00000123344.2";
mm10-chrY	HAVANA	exon	43141687	43141785	.	-	.	gene_id "ENSMUSG00000099542.1"; transcript_id "ENSMUST00000190977.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28504"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28504-201"; exon_number 8; exon_id "ENSMUSE00001319202.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047975.2"; havana_transcript "OTTMUST00000123344.2";
mm10-chrY	HAVANA	exon	43141302	43141328	.	-	.	gene_id "ENSMUSG00000099542.1"; transcript_id "ENSMUST00000190977.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28504"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28504-201"; exon_number 9; exon_id "ENSMUSE00001325251.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047975.2"; havana_transcript "OTTMUST00000123344.2";
mm10-chrY	HAVANA	gene	43371322	43372014	.	+	.	gene_id "ENSMUSG00000100107.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28567"; level 2; havana_gene "OTTMUSG00000047990.1";
mm10-chrY	HAVANA	transcript	43371322	43372014	.	+	.	gene_id "ENSMUSG00000100107.1"; transcript_id "ENSMUST00000190270.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28567"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28567-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047990.1"; havana_transcript "OTTMUST00000123368.1";
mm10-chrY	HAVANA	exon	43371322	43372014	.	+	.	gene_id "ENSMUSG00000100107.1"; transcript_id "ENSMUST00000190270.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28567"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28567-201"; exon_number 1; exon_id "ENSMUSE00001318945.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047990.1"; havana_transcript "OTTMUST00000123368.1";
mm10-chrY	HAVANA	gene	43451134	43454367	.	-	.	gene_id "ENSMUSG00000100051.1"; gene_type "lincRNA"; gene_name "Gm28568"; level 2; havana_gene "OTTMUSG00000047991.1";
mm10-chrY	HAVANA	transcript	43451134	43454367	.	-	.	gene_id "ENSMUSG00000100051.1"; transcript_id "ENSMUST00000187762.1"; gene_type "lincRNA"; gene_name "Gm28568"; transcript_type "lincRNA"; transcript_name "Gm28568-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047991.1"; havana_transcript "OTTMUST00000123369.1";
mm10-chrY	HAVANA	exon	43453729	43454367	.	-	.	gene_id "ENSMUSG00000100051.1"; transcript_id "ENSMUST00000187762.1"; gene_type "lincRNA"; gene_name "Gm28568"; transcript_type "lincRNA"; transcript_name "Gm28568-201"; exon_number 1; exon_id "ENSMUSE00001323263.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047991.1"; havana_transcript "OTTMUST00000123369.1";
mm10-chrY	HAVANA	exon	43453060	43453245	.	-	.	gene_id "ENSMUSG00000100051.1"; transcript_id "ENSMUST00000187762.1"; gene_type "lincRNA"; gene_name "Gm28568"; transcript_type "lincRNA"; transcript_name "Gm28568-201"; exon_number 2; exon_id "ENSMUSE00001320193.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047991.1"; havana_transcript "OTTMUST00000123369.1";
mm10-chrY	HAVANA	exon	43452150	43452333	.	-	.	gene_id "ENSMUSG00000100051.1"; transcript_id "ENSMUST00000187762.1"; gene_type "lincRNA"; gene_name "Gm28568"; transcript_type "lincRNA"; transcript_name "Gm28568-201"; exon_number 3; exon_id "ENSMUSE00001320668.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047991.1"; havana_transcript "OTTMUST00000123369.1";
mm10-chrY	HAVANA	exon	43451134	43451622	.	-	.	gene_id "ENSMUSG00000100051.1"; transcript_id "ENSMUST00000187762.1"; gene_type "lincRNA"; gene_name "Gm28568"; transcript_type "lincRNA"; transcript_name "Gm28568-201"; exon_number 4; exon_id "ENSMUSE00001329049.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047991.1"; havana_transcript "OTTMUST00000123369.1";
mm10-chrY	HAVANA	transcript	43451554	43453914	.	-	.	gene_id "ENSMUSG00000100051.1"; transcript_id "ENSMUST00000188639.1"; gene_type "lincRNA"; gene_name "Gm28568"; transcript_type "lincRNA"; transcript_name "Gm28568-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000047991.1"; havana_transcript "OTTMUST00000123370.1";
mm10-chrY	HAVANA	exon	43453729	43453914	.	-	.	gene_id "ENSMUSG00000100051.1"; transcript_id "ENSMUST00000188639.1"; gene_type "lincRNA"; gene_name "Gm28568"; transcript_type "lincRNA"; transcript_name "Gm28568-202"; exon_number 1; exon_id "ENSMUSE00001331199.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000047991.1"; havana_transcript "OTTMUST00000123370.1";
mm10-chrY	HAVANA	exon	43453060	43453241	.	-	.	gene_id "ENSMUSG00000100051.1"; transcript_id "ENSMUST00000188639.1"; gene_type "lincRNA"; gene_name "Gm28568"; transcript_type "lincRNA"; transcript_name "Gm28568-202"; exon_number 2; exon_id "ENSMUSE00001324003.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000047991.1"; havana_transcript "OTTMUST00000123370.1";
mm10-chrY	HAVANA	exon	43451554	43451622	.	-	.	gene_id "ENSMUSG00000100051.1"; transcript_id "ENSMUST00000188639.1"; gene_type "lincRNA"; gene_name "Gm28568"; transcript_type "lincRNA"; transcript_name "Gm28568-202"; exon_number 3; exon_id "ENSMUSE00001335354.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000047991.1"; havana_transcript "OTTMUST00000123370.1";
mm10-chrY	HAVANA	gene	43803100	43805379	.	+	.	gene_id "ENSMUSG00000099977.6"; gene_type "lincRNA"; gene_name "Gm29286"; level 2; havana_gene "OTTMUSG00000048028.1";
mm10-chrY	HAVANA	transcript	43803100	43805379	.	+	.	gene_id "ENSMUSG00000099977.6"; transcript_id "ENSMUST00000187736.6"; gene_type "lincRNA"; gene_name "Gm29286"; transcript_type "lincRNA"; transcript_name "Gm29286-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048028.1"; havana_transcript "OTTMUST00000123453.1";
mm10-chrY	HAVANA	exon	43803100	43803200	.	+	.	gene_id "ENSMUSG00000099977.6"; transcript_id "ENSMUST00000187736.6"; gene_type "lincRNA"; gene_name "Gm29286"; transcript_type "lincRNA"; transcript_name "Gm29286-202"; exon_number 1; exon_id "ENSMUSE00001332779.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048028.1"; havana_transcript "OTTMUST00000123453.1";
mm10-chrY	HAVANA	exon	43803688	43803869	.	+	.	gene_id "ENSMUSG00000099977.6"; transcript_id "ENSMUST00000187736.6"; gene_type "lincRNA"; gene_name "Gm29286"; transcript_type "lincRNA"; transcript_name "Gm29286-202"; exon_number 2; exon_id "ENSMUSE00001318547.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048028.1"; havana_transcript "OTTMUST00000123453.1";
mm10-chrY	HAVANA	exon	43804598	43804782	.	+	.	gene_id "ENSMUSG00000099977.6"; transcript_id "ENSMUST00000187736.6"; gene_type "lincRNA"; gene_name "Gm29286"; transcript_type "lincRNA"; transcript_name "Gm29286-202"; exon_number 3; exon_id "ENSMUSE00001326827.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048028.1"; havana_transcript "OTTMUST00000123453.1";
mm10-chrY	HAVANA	exon	43805311	43805379	.	+	.	gene_id "ENSMUSG00000099977.6"; transcript_id "ENSMUST00000187736.6"; gene_type "lincRNA"; gene_name "Gm29286"; transcript_type "lincRNA"; transcript_name "Gm29286-202"; exon_number 4; exon_id "ENSMUSE00001335237.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048028.1"; havana_transcript "OTTMUST00000123453.1";
mm10-chrY	HAVANA	transcript	43803100	43805379	.	+	.	gene_id "ENSMUSG00000099977.6"; transcript_id "ENSMUST00000186707.1"; gene_type "lincRNA"; gene_name "Gm29286"; transcript_type "lincRNA"; transcript_name "Gm29286-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048028.1"; havana_transcript "OTTMUST00000123454.1";
mm10-chrY	HAVANA	exon	43803100	43803200	.	+	.	gene_id "ENSMUSG00000099977.6"; transcript_id "ENSMUST00000186707.1"; gene_type "lincRNA"; gene_name "Gm29286"; transcript_type "lincRNA"; transcript_name "Gm29286-201"; exon_number 1; exon_id "ENSMUSE00001332779.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048028.1"; havana_transcript "OTTMUST00000123454.1";
mm10-chrY	HAVANA	exon	43803688	43803869	.	+	.	gene_id "ENSMUSG00000099977.6"; transcript_id "ENSMUST00000186707.1"; gene_type "lincRNA"; gene_name "Gm29286"; transcript_type "lincRNA"; transcript_name "Gm29286-201"; exon_number 2; exon_id "ENSMUSE00001318547.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048028.1"; havana_transcript "OTTMUST00000123454.1";
mm10-chrY	HAVANA	exon	43805311	43805379	.	+	.	gene_id "ENSMUSG00000099977.6"; transcript_id "ENSMUST00000186707.1"; gene_type "lincRNA"; gene_name "Gm29286"; transcript_type "lincRNA"; transcript_name "Gm29286-201"; exon_number 3; exon_id "ENSMUSE00001335237.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048028.1"; havana_transcript "OTTMUST00000123454.1";
mm10-chrY	HAVANA	gene	43842631	43843158	.	+	.	gene_id "ENSMUSG00000099415.1"; gene_type "lincRNA"; gene_name "Gm29285"; level 2; havana_gene "OTTMUSG00000048029.1";
mm10-chrY	HAVANA	transcript	43842631	43843158	.	+	.	gene_id "ENSMUSG00000099415.1"; transcript_id "ENSMUST00000185500.1"; gene_type "lincRNA"; gene_name "Gm29285"; transcript_type "lincRNA"; transcript_name "Gm29285-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048029.1"; havana_transcript "OTTMUST00000123455.1";
mm10-chrY	HAVANA	exon	43842631	43842735	.	+	.	gene_id "ENSMUSG00000099415.1"; transcript_id "ENSMUST00000185500.1"; gene_type "lincRNA"; gene_name "Gm29285"; transcript_type "lincRNA"; transcript_name "Gm29285-201"; exon_number 1; exon_id "ENSMUSE00001322109.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048029.1"; havana_transcript "OTTMUST00000123455.1";
mm10-chrY	HAVANA	exon	43843090	43843158	.	+	.	gene_id "ENSMUSG00000099415.1"; transcript_id "ENSMUST00000185500.1"; gene_type "lincRNA"; gene_name "Gm29285"; transcript_type "lincRNA"; transcript_name "Gm29285-201"; exon_number 2; exon_id "ENSMUSE00001332286.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048029.1"; havana_transcript "OTTMUST00000123455.1";
mm10-chrY	HAVANA	gene	43865261	43867624	.	+	.	gene_id "ENSMUSG00000100953.6"; gene_type "lincRNA"; gene_name "Gm28280"; level 2; havana_gene "OTTMUSG00000048030.1";
mm10-chrY	HAVANA	transcript	43865261	43867624	.	+	.	gene_id "ENSMUSG00000100953.6"; transcript_id "ENSMUST00000188196.6"; gene_type "lincRNA"; gene_name "Gm28280"; transcript_type "lincRNA"; transcript_name "Gm28280-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048030.1"; havana_transcript "OTTMUST00000123456.1";
mm10-chrY	HAVANA	exon	43865261	43865446	.	+	.	gene_id "ENSMUSG00000100953.6"; transcript_id "ENSMUST00000188196.6"; gene_type "lincRNA"; gene_name "Gm28280"; transcript_type "lincRNA"; transcript_name "Gm28280-201"; exon_number 1; exon_id "ENSMUSE00001332085.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048030.1"; havana_transcript "OTTMUST00000123456.1";
mm10-chrY	HAVANA	exon	43865934	43866115	.	+	.	gene_id "ENSMUSG00000100953.6"; transcript_id "ENSMUST00000188196.6"; gene_type "lincRNA"; gene_name "Gm28280"; transcript_type "lincRNA"; transcript_name "Gm28280-201"; exon_number 2; exon_id "ENSMUSE00001324885.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048030.1"; havana_transcript "OTTMUST00000123456.1";
mm10-chrY	HAVANA	exon	43866843	43867027	.	+	.	gene_id "ENSMUSG00000100953.6"; transcript_id "ENSMUST00000188196.6"; gene_type "lincRNA"; gene_name "Gm28280"; transcript_type "lincRNA"; transcript_name "Gm28280-201"; exon_number 3; exon_id "ENSMUSE00001330694.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048030.1"; havana_transcript "OTTMUST00000123456.1";
mm10-chrY	HAVANA	exon	43867556	43867624	.	+	.	gene_id "ENSMUSG00000100953.6"; transcript_id "ENSMUST00000188196.6"; gene_type "lincRNA"; gene_name "Gm28280"; transcript_type "lincRNA"; transcript_name "Gm28280-201"; exon_number 4; exon_id "ENSMUSE00001336067.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048030.1"; havana_transcript "OTTMUST00000123456.1";
mm10-chrY	HAVANA	transcript	43865261	43867624	.	+	.	gene_id "ENSMUSG00000100953.6"; transcript_id "ENSMUST00000190649.1"; gene_type "lincRNA"; gene_name "Gm28280"; transcript_type "lincRNA"; transcript_name "Gm28280-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048030.1"; havana_transcript "OTTMUST00000123457.1";
mm10-chrY	HAVANA	exon	43865261	43865446	.	+	.	gene_id "ENSMUSG00000100953.6"; transcript_id "ENSMUST00000190649.1"; gene_type "lincRNA"; gene_name "Gm28280"; transcript_type "lincRNA"; transcript_name "Gm28280-202"; exon_number 1; exon_id "ENSMUSE00001332085.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048030.1"; havana_transcript "OTTMUST00000123457.1";
mm10-chrY	HAVANA	exon	43865934	43866115	.	+	.	gene_id "ENSMUSG00000100953.6"; transcript_id "ENSMUST00000190649.1"; gene_type "lincRNA"; gene_name "Gm28280"; transcript_type "lincRNA"; transcript_name "Gm28280-202"; exon_number 2; exon_id "ENSMUSE00001324885.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048030.1"; havana_transcript "OTTMUST00000123457.1";
mm10-chrY	HAVANA	exon	43867556	43867624	.	+	.	gene_id "ENSMUSG00000100953.6"; transcript_id "ENSMUST00000190649.1"; gene_type "lincRNA"; gene_name "Gm28280"; transcript_type "lincRNA"; transcript_name "Gm28280-202"; exon_number 3; exon_id "ENSMUSE00001336067.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048030.1"; havana_transcript "OTTMUST00000123457.1";
mm10-chrY	HAVANA	gene	43952162	43978249	.	+	.	gene_id "ENSMUSG00000096332.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; level 2; havana_gene "OTTMUSG00000048031.1";
mm10-chrY	HAVANA	transcript	43952162	43978249	.	+	.	gene_id "ENSMUSG00000096332.2"; transcript_id "ENSMUST00000179551.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21241-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048031.1"; havana_transcript "OTTMUST00000123458.1";
mm10-chrY	HAVANA	exon	43952162	43952205	.	+	.	gene_id "ENSMUSG00000096332.2"; transcript_id "ENSMUST00000179551.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21241-201"; exon_number 1; exon_id "ENSMUSE00001319948.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048031.1"; havana_transcript "OTTMUST00000123458.1";
mm10-chrY	HAVANA	exon	43953596	43953727	.	+	.	gene_id "ENSMUSG00000096332.2"; transcript_id "ENSMUST00000179551.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21241-201"; exon_number 2; exon_id "ENSMUSE00000967441.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048031.1"; havana_transcript "OTTMUST00000123458.1";
mm10-chrY	HAVANA	exon	43959033	43959099	.	+	.	gene_id "ENSMUSG00000096332.2"; transcript_id "ENSMUST00000179551.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21241-201"; exon_number 3; exon_id "ENSMUSE00001064629.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048031.1"; havana_transcript "OTTMUST00000123458.1";
mm10-chrY	HAVANA	exon	43959711	43959745	.	+	.	gene_id "ENSMUSG00000096332.2"; transcript_id "ENSMUST00000179551.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21241-201"; exon_number 4; exon_id "ENSMUSE00001094783.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048031.1"; havana_transcript "OTTMUST00000123458.1";
mm10-chrY	HAVANA	exon	43966769	43966835	.	+	.	gene_id "ENSMUSG00000096332.2"; transcript_id "ENSMUST00000179551.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21241-201"; exon_number 5; exon_id "ENSMUSE00000973795.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048031.1"; havana_transcript "OTTMUST00000123458.1";
mm10-chrY	HAVANA	exon	43967399	43967433	.	+	.	gene_id "ENSMUSG00000096332.2"; transcript_id "ENSMUST00000179551.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21241-201"; exon_number 6; exon_id "ENSMUSE00001001666.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048031.1"; havana_transcript "OTTMUST00000123458.1";
mm10-chrY	HAVANA	exon	43974561	43974678	.	+	.	gene_id "ENSMUSG00000096332.2"; transcript_id "ENSMUST00000179551.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21241-201"; exon_number 7; exon_id "ENSMUSE00001028216.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048031.1"; havana_transcript "OTTMUST00000123458.1";
mm10-chrY	HAVANA	exon	43975432	43975531	.	+	.	gene_id "ENSMUSG00000096332.2"; transcript_id "ENSMUST00000179551.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21241-201"; exon_number 8; exon_id "ENSMUSE00001013163.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048031.1"; havana_transcript "OTTMUST00000123458.1";
mm10-chrY	HAVANA	exon	43977555	43977651	.	+	.	gene_id "ENSMUSG00000096332.2"; transcript_id "ENSMUST00000179551.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21241-201"; exon_number 9; exon_id "ENSMUSE00001333843.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048031.1"; havana_transcript "OTTMUST00000123458.1";
mm10-chrY	HAVANA	exon	43978011	43978249	.	+	.	gene_id "ENSMUSG00000096332.2"; transcript_id "ENSMUST00000179551.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21241"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21241-201"; exon_number 10; exon_id "ENSMUSE00001321786.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048031.1"; havana_transcript "OTTMUST00000123458.1";
mm10-chrY	HAVANA	gene	44154607	44157841	.	-	.	gene_id "ENSMUSG00000100693.1"; gene_type "lincRNA"; gene_name "Gm28278"; level 2; havana_gene "OTTMUSG00000048032.1";
mm10-chrY	HAVANA	transcript	44154607	44157841	.	-	.	gene_id "ENSMUSG00000100693.1"; transcript_id "ENSMUST00000185603.1"; gene_type "lincRNA"; gene_name "Gm28278"; transcript_type "lincRNA"; transcript_name "Gm28278-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048032.1"; havana_transcript "OTTMUST00000123459.1";
mm10-chrY	HAVANA	exon	44157203	44157841	.	-	.	gene_id "ENSMUSG00000100693.1"; transcript_id "ENSMUST00000185603.1"; gene_type "lincRNA"; gene_name "Gm28278"; transcript_type "lincRNA"; transcript_name "Gm28278-201"; exon_number 1; exon_id "ENSMUSE00001326705.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048032.1"; havana_transcript "OTTMUST00000123459.1";
mm10-chrY	HAVANA	exon	44156534	44156719	.	-	.	gene_id "ENSMUSG00000100693.1"; transcript_id "ENSMUST00000185603.1"; gene_type "lincRNA"; gene_name "Gm28278"; transcript_type "lincRNA"; transcript_name "Gm28278-201"; exon_number 2; exon_id "ENSMUSE00001329744.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048032.1"; havana_transcript "OTTMUST00000123459.1";
mm10-chrY	HAVANA	exon	44155623	44155806	.	-	.	gene_id "ENSMUSG00000100693.1"; transcript_id "ENSMUST00000185603.1"; gene_type "lincRNA"; gene_name "Gm28278"; transcript_type "lincRNA"; transcript_name "Gm28278-201"; exon_number 3; exon_id "ENSMUSE00001324609.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048032.1"; havana_transcript "OTTMUST00000123459.1";
mm10-chrY	HAVANA	exon	44154607	44155096	.	-	.	gene_id "ENSMUSG00000100693.1"; transcript_id "ENSMUST00000185603.1"; gene_type "lincRNA"; gene_name "Gm28278"; transcript_type "lincRNA"; transcript_name "Gm28278-201"; exon_number 4; exon_id "ENSMUSE00001320648.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048032.1"; havana_transcript "OTTMUST00000123459.1";
mm10-chrY	HAVANA	transcript	44155028	44157388	.	-	.	gene_id "ENSMUSG00000100693.1"; transcript_id "ENSMUST00000188061.1"; gene_type "lincRNA"; gene_name "Gm28278"; transcript_type "lincRNA"; transcript_name "Gm28278-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048032.1"; havana_transcript "OTTMUST00000123460.1";
mm10-chrY	HAVANA	exon	44157203	44157388	.	-	.	gene_id "ENSMUSG00000100693.1"; transcript_id "ENSMUST00000188061.1"; gene_type "lincRNA"; gene_name "Gm28278"; transcript_type "lincRNA"; transcript_name "Gm28278-202"; exon_number 1; exon_id "ENSMUSE00001332466.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048032.1"; havana_transcript "OTTMUST00000123460.1";
mm10-chrY	HAVANA	exon	44156534	44156715	.	-	.	gene_id "ENSMUSG00000100693.1"; transcript_id "ENSMUST00000188061.1"; gene_type "lincRNA"; gene_name "Gm28278"; transcript_type "lincRNA"; transcript_name "Gm28278-202"; exon_number 2; exon_id "ENSMUSE00001321471.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048032.1"; havana_transcript "OTTMUST00000123460.1";
mm10-chrY	HAVANA	exon	44155028	44155096	.	-	.	gene_id "ENSMUSG00000100693.1"; transcript_id "ENSMUST00000188061.1"; gene_type "lincRNA"; gene_name "Gm28278"; transcript_type "lincRNA"; transcript_name "Gm28278-202"; exon_number 3; exon_id "ENSMUSE00001335428.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048032.1"; havana_transcript "OTTMUST00000123460.1";
mm10-chrY	HAVANA	gene	44168124	44171356	.	-	.	gene_id "ENSMUSG00000099638.1"; gene_type "lincRNA"; gene_name "Gm28279"; level 2; havana_gene "OTTMUSG00000048033.1";
mm10-chrY	HAVANA	transcript	44168124	44171356	.	-	.	gene_id "ENSMUSG00000099638.1"; transcript_id "ENSMUST00000186248.1"; gene_type "lincRNA"; gene_name "Gm28279"; transcript_type "lincRNA"; transcript_name "Gm28279-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048033.1"; havana_transcript "OTTMUST00000123461.1";
mm10-chrY	HAVANA	exon	44170718	44171356	.	-	.	gene_id "ENSMUSG00000099638.1"; transcript_id "ENSMUST00000186248.1"; gene_type "lincRNA"; gene_name "Gm28279"; transcript_type "lincRNA"; transcript_name "Gm28279-201"; exon_number 1; exon_id "ENSMUSE00001327793.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048033.1"; havana_transcript "OTTMUST00000123461.1";
mm10-chrY	HAVANA	exon	44170051	44170233	.	-	.	gene_id "ENSMUSG00000099638.1"; transcript_id "ENSMUST00000186248.1"; gene_type "lincRNA"; gene_name "Gm28279"; transcript_type "lincRNA"; transcript_name "Gm28279-201"; exon_number 2; exon_id "ENSMUSE00001318878.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048033.1"; havana_transcript "OTTMUST00000123461.1";
mm10-chrY	HAVANA	exon	44169141	44169321	.	-	.	gene_id "ENSMUSG00000099638.1"; transcript_id "ENSMUST00000186248.1"; gene_type "lincRNA"; gene_name "Gm28279"; transcript_type "lincRNA"; transcript_name "Gm28279-201"; exon_number 3; exon_id "ENSMUSE00001333270.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048033.1"; havana_transcript "OTTMUST00000123461.1";
mm10-chrY	HAVANA	exon	44168124	44168613	.	-	.	gene_id "ENSMUSG00000099638.1"; transcript_id "ENSMUST00000186248.1"; gene_type "lincRNA"; gene_name "Gm28279"; transcript_type "lincRNA"; transcript_name "Gm28279-201"; exon_number 4; exon_id "ENSMUSE00001318579.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048033.1"; havana_transcript "OTTMUST00000123461.1";
mm10-chrY	HAVANA	transcript	44168548	44170903	.	-	.	gene_id "ENSMUSG00000099638.1"; transcript_id "ENSMUST00000188233.1"; gene_type "lincRNA"; gene_name "Gm28279"; transcript_type "lincRNA"; transcript_name "Gm28279-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048033.1"; havana_transcript "OTTMUST00000123462.1";
mm10-chrY	HAVANA	exon	44170718	44170903	.	-	.	gene_id "ENSMUSG00000099638.1"; transcript_id "ENSMUST00000188233.1"; gene_type "lincRNA"; gene_name "Gm28279"; transcript_type "lincRNA"; transcript_name "Gm28279-202"; exon_number 1; exon_id "ENSMUSE00001327772.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048033.1"; havana_transcript "OTTMUST00000123462.1";
mm10-chrY	HAVANA	exon	44170051	44170229	.	-	.	gene_id "ENSMUSG00000099638.1"; transcript_id "ENSMUST00000188233.1"; gene_type "lincRNA"; gene_name "Gm28279"; transcript_type "lincRNA"; transcript_name "Gm28279-202"; exon_number 2; exon_id "ENSMUSE00001319351.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048033.1"; havana_transcript "OTTMUST00000123462.1";
mm10-chrY	HAVANA	exon	44168548	44168613	.	-	.	gene_id "ENSMUSG00000099638.1"; transcript_id "ENSMUST00000188233.1"; gene_type "lincRNA"; gene_name "Gm28279"; transcript_type "lincRNA"; transcript_name "Gm28279-202"; exon_number 3; exon_id "ENSMUSE00001323830.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048033.1"; havana_transcript "OTTMUST00000123462.1";
mm10-chrY	HAVANA	gene	44232123	44264444	.	-	.	gene_id "ENSMUSG00000094181.7"; gene_type "protein_coding"; gene_name "Gm21739"; level 2; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	HAVANA	transcript	44232123	44264444	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	exon	44264401	44264444	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 1; exon_id "ENSMUSE00001324886.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	exon	44262908	44263039	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 2; exon_id "ENSMUSE00001329156.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	CDS	44262908	44263025	.	-	0	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 2; exon_id "ENSMUSE00001329156.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	start_codon	44263023	44263025	.	-	0	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 2; exon_id "ENSMUSE00001329156.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	exon	44251432	44251498	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 3; exon_id "ENSMUSE00000993475.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	CDS	44251432	44251498	.	-	2	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 3; exon_id "ENSMUSE00000993475.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	exon	44250793	44250827	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 4; exon_id "ENSMUSE00001056113.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	CDS	44250793	44250827	.	-	1	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 4; exon_id "ENSMUSE00001056113.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	exon	44243712	44243778	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 5; exon_id "ENSMUSE00001005395.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	CDS	44243712	44243778	.	-	2	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 5; exon_id "ENSMUSE00001005395.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	exon	44243116	44243150	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 6; exon_id "ENSMUSE00001055492.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	CDS	44243116	44243150	.	-	1	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 6; exon_id "ENSMUSE00001055492.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	exon	44235670	44235787	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 7; exon_id "ENSMUSE00001089258.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	CDS	44235670	44235787	.	-	2	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 7; exon_id "ENSMUSE00001089258.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	exon	44234821	44234920	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 8; exon_id "ENSMUSE00001333316.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	CDS	44234821	44234920	.	-	1	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 8; exon_id "ENSMUSE00001333316.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	exon	44232717	44232815	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 9; exon_id "ENSMUSE00001322975.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	CDS	44232717	44232815	.	-	0	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 9; exon_id "ENSMUSE00001322975.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	exon	44232123	44232358	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 10; exon_id "ENSMUSE00001320162.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	CDS	44232332	44232358	.	-	0	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 10; exon_id "ENSMUSE00001320162.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	stop_codon	44232329	44232331	.	-	0	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 10; exon_id "ENSMUSE00001320162.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	UTR	44264401	44264444	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 1; exon_id "ENSMUSE00001324886.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	UTR	44263026	44263039	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 2; exon_id "ENSMUSE00001329156.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	HAVANA	UTR	44232123	44232331	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000188917.6"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-202"; exon_number 10; exon_id "ENSMUSE00001320162.1"; level 2; protein_id "ENSMUSP00000140604.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048034.1"; havana_transcript "OTTMUST00000123463.1";
mm10-chrY	ENSEMBL	transcript	44234854	44263016	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	exon	44262908	44263016	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 1; exon_id "ENSMUSE00000973348.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	CDS	44262908	44263016	.	-	0	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 1; exon_id "ENSMUSE00000973348.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	start_codon	44263014	44263016	.	-	0	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 1; exon_id "ENSMUSE00000973348.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	exon	44251432	44251498	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 2; exon_id "ENSMUSE00000993475.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	CDS	44251432	44251498	.	-	2	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 2; exon_id "ENSMUSE00000993475.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	exon	44250793	44250827	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 3; exon_id "ENSMUSE00001056113.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	CDS	44250793	44250827	.	-	1	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 3; exon_id "ENSMUSE00001056113.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	exon	44243712	44243778	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 4; exon_id "ENSMUSE00001005395.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	CDS	44243712	44243778	.	-	2	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 4; exon_id "ENSMUSE00001005395.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	exon	44243116	44243150	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 5; exon_id "ENSMUSE00001055492.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	CDS	44243116	44243150	.	-	1	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 5; exon_id "ENSMUSE00001055492.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	exon	44235670	44235787	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 6; exon_id "ENSMUSE00001089258.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	CDS	44235670	44235787	.	-	2	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 6; exon_id "ENSMUSE00001089258.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	exon	44234854	44234920	.	-	.	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 7; exon_id "ENSMUSE00001092138.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	ENSEMBL	CDS	44234854	44234920	.	-	1	gene_id "ENSMUSG00000094181.7"; transcript_id "ENSMUST00000178639.1"; gene_type "protein_coding"; gene_name "Gm21739"; transcript_type "protein_coding"; transcript_name "Gm21739-201"; exon_number 7; exon_id "ENSMUSE00001092138.1"; level 3; protein_id "ENSMUSP00000137088.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048034.1";
mm10-chrY	HAVANA	gene	44348302	44348829	.	-	.	gene_id "ENSMUSG00000102081.1"; gene_type "lincRNA"; gene_name "Gm28886"; level 2; havana_gene "OTTMUSG00000048045.1";
mm10-chrY	HAVANA	transcript	44348302	44348829	.	-	.	gene_id "ENSMUSG00000102081.1"; transcript_id "ENSMUST00000187350.1"; gene_type "lincRNA"; gene_name "Gm28886"; transcript_type "lincRNA"; transcript_name "Gm28886-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048045.1"; havana_transcript "OTTMUST00000123479.1";
mm10-chrY	HAVANA	exon	44348725	44348829	.	-	.	gene_id "ENSMUSG00000102081.1"; transcript_id "ENSMUST00000187350.1"; gene_type "lincRNA"; gene_name "Gm28886"; transcript_type "lincRNA"; transcript_name "Gm28886-201"; exon_number 1; exon_id "ENSMUSE00001327114.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048045.1"; havana_transcript "OTTMUST00000123479.1";
mm10-chrY	HAVANA	exon	44348302	44348370	.	-	.	gene_id "ENSMUSG00000102081.1"; transcript_id "ENSMUST00000187350.1"; gene_type "lincRNA"; gene_name "Gm28886"; transcript_type "lincRNA"; transcript_name "Gm28886-201"; exon_number 2; exon_id "ENSMUSE00001320283.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048045.1"; havana_transcript "OTTMUST00000123479.1";
mm10-chrY	HAVANA	transcript	44348346	44348829	.	-	.	gene_id "ENSMUSG00000102081.1"; transcript_id "ENSMUST00000187889.1"; gene_type "lincRNA"; gene_name "Gm28886"; transcript_type "lincRNA"; transcript_name "Gm28886-202"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000048045.1"; havana_transcript "OTTMUST00000123480.1";
mm10-chrY	HAVANA	exon	44348346	44348829	.	-	.	gene_id "ENSMUSG00000102081.1"; transcript_id "ENSMUST00000187889.1"; gene_type "lincRNA"; gene_name "Gm28886"; transcript_type "lincRNA"; transcript_name "Gm28886-202"; exon_number 1; exon_id "ENSMUSE00001327854.1"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000048045.1"; havana_transcript "OTTMUST00000123480.1";
mm10-chrY	HAVANA	gene	44385913	44388191	.	-	.	gene_id "ENSMUSG00000102031.6"; gene_type "lincRNA"; gene_name "Gm29426"; level 2; havana_gene "OTTMUSG00000048046.1";
mm10-chrY	HAVANA	transcript	44385913	44388191	.	-	.	gene_id "ENSMUSG00000102031.6"; transcript_id "ENSMUST00000186564.6"; gene_type "lincRNA"; gene_name "Gm29426"; transcript_type "lincRNA"; transcript_name "Gm29426-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048046.1"; havana_transcript "OTTMUST00000123481.1";
mm10-chrY	HAVANA	exon	44388091	44388191	.	-	.	gene_id "ENSMUSG00000102031.6"; transcript_id "ENSMUST00000186564.6"; gene_type "lincRNA"; gene_name "Gm29426"; transcript_type "lincRNA"; transcript_name "Gm29426-202"; exon_number 1; exon_id "ENSMUSE00001321215.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048046.1"; havana_transcript "OTTMUST00000123481.1";
mm10-chrY	HAVANA	exon	44387422	44387603	.	-	.	gene_id "ENSMUSG00000102031.6"; transcript_id "ENSMUST00000186564.6"; gene_type "lincRNA"; gene_name "Gm29426"; transcript_type "lincRNA"; transcript_name "Gm29426-202"; exon_number 2; exon_id "ENSMUSE00001330651.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048046.1"; havana_transcript "OTTMUST00000123481.1";
mm10-chrY	HAVANA	exon	44386509	44386693	.	-	.	gene_id "ENSMUSG00000102031.6"; transcript_id "ENSMUST00000186564.6"; gene_type "lincRNA"; gene_name "Gm29426"; transcript_type "lincRNA"; transcript_name "Gm29426-202"; exon_number 3; exon_id "ENSMUSE00001323380.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048046.1"; havana_transcript "OTTMUST00000123481.1";
mm10-chrY	HAVANA	exon	44385913	44385980	.	-	.	gene_id "ENSMUSG00000102031.6"; transcript_id "ENSMUST00000186564.6"; gene_type "lincRNA"; gene_name "Gm29426"; transcript_type "lincRNA"; transcript_name "Gm29426-202"; exon_number 4; exon_id "ENSMUSE00001326442.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048046.1"; havana_transcript "OTTMUST00000123481.1";
mm10-chrY	HAVANA	transcript	44385913	44388191	.	-	.	gene_id "ENSMUSG00000102031.6"; transcript_id "ENSMUST00000185613.1"; gene_type "lincRNA"; gene_name "Gm29426"; transcript_type "lincRNA"; transcript_name "Gm29426-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048046.1"; havana_transcript "OTTMUST00000123482.1";
mm10-chrY	HAVANA	exon	44388091	44388191	.	-	.	gene_id "ENSMUSG00000102031.6"; transcript_id "ENSMUST00000185613.1"; gene_type "lincRNA"; gene_name "Gm29426"; transcript_type "lincRNA"; transcript_name "Gm29426-201"; exon_number 1; exon_id "ENSMUSE00001321215.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048046.1"; havana_transcript "OTTMUST00000123482.1";
mm10-chrY	HAVANA	exon	44387422	44387603	.	-	.	gene_id "ENSMUSG00000102031.6"; transcript_id "ENSMUST00000185613.1"; gene_type "lincRNA"; gene_name "Gm29426"; transcript_type "lincRNA"; transcript_name "Gm29426-201"; exon_number 2; exon_id "ENSMUSE00001330651.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048046.1"; havana_transcript "OTTMUST00000123482.1";
mm10-chrY	HAVANA	exon	44385913	44385980	.	-	.	gene_id "ENSMUSG00000102031.6"; transcript_id "ENSMUST00000185613.1"; gene_type "lincRNA"; gene_name "Gm29426"; transcript_type "lincRNA"; transcript_name "Gm29426-201"; exon_number 3; exon_id "ENSMUSE00001326442.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048046.1"; havana_transcript "OTTMUST00000123482.1";
mm10-chrY	HAVANA	gene	44454247	44454809	.	+	.	gene_id "ENSMUSG00000100408.1"; gene_type "processed_pseudogene"; gene_name "Gm28885"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048047.1";
mm10-chrY	HAVANA	transcript	44454247	44454809	.	+	.	gene_id "ENSMUSG00000100408.1"; transcript_id "ENSMUST00000185615.1"; gene_type "processed_pseudogene"; gene_name "Gm28885"; transcript_type "processed_pseudogene"; transcript_name "Gm28885-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048047.1"; havana_transcript "OTTMUST00000123483.1";
mm10-chrY	HAVANA	exon	44454247	44454809	.	+	.	gene_id "ENSMUSG00000100408.1"; transcript_id "ENSMUST00000185615.1"; gene_type "processed_pseudogene"; gene_name "Gm28885"; transcript_type "processed_pseudogene"; transcript_name "Gm28885-201"; exon_number 1; exon_id "ENSMUSE00001318467.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048047.1"; havana_transcript "OTTMUST00000123483.1";
mm10-chrY	HAVANA	gene	44757980	44758675	.	-	.	gene_id "ENSMUSG00000100991.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21856"; level 2; havana_gene "OTTMUSG00000048048.1";
mm10-chrY	HAVANA	transcript	44757980	44758675	.	-	.	gene_id "ENSMUSG00000100991.1"; transcript_id "ENSMUST00000187547.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21856"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21856-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048048.1"; havana_transcript "OTTMUST00000123484.1";
mm10-chrY	HAVANA	exon	44757980	44758675	.	-	.	gene_id "ENSMUSG00000100991.1"; transcript_id "ENSMUST00000187547.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21856"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21856-201"; exon_number 1; exon_id "ENSMUSE00001334549.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048048.1"; havana_transcript "OTTMUST00000123484.1";
mm10-chrY	HAVANA	gene	44818410	44827383	.	-	.	gene_id "ENSMUSG00000102116.1"; gene_type "lincRNA"; gene_name "Gm28887"; level 2; havana_gene "OTTMUSG00000048049.1";
mm10-chrY	HAVANA	transcript	44818410	44827383	.	-	.	gene_id "ENSMUSG00000102116.1"; transcript_id "ENSMUST00000186065.1"; gene_type "lincRNA"; gene_name "Gm28887"; transcript_type "lincRNA"; transcript_name "Gm28887-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048049.1"; havana_transcript "OTTMUST00000123485.1";
mm10-chrY	HAVANA	exon	44827324	44827383	.	-	.	gene_id "ENSMUSG00000102116.1"; transcript_id "ENSMUST00000186065.1"; gene_type "lincRNA"; gene_name "Gm28887"; transcript_type "lincRNA"; transcript_name "Gm28887-201"; exon_number 1; exon_id "ENSMUSE00001333980.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048049.1"; havana_transcript "OTTMUST00000123485.1";
mm10-chrY	HAVANA	exon	44823525	44823666	.	-	.	gene_id "ENSMUSG00000102116.1"; transcript_id "ENSMUST00000186065.1"; gene_type "lincRNA"; gene_name "Gm28887"; transcript_type "lincRNA"; transcript_name "Gm28887-201"; exon_number 2; exon_id "ENSMUSE00001323287.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048049.1"; havana_transcript "OTTMUST00000123485.1";
mm10-chrY	HAVANA	exon	44818410	44818501	.	-	.	gene_id "ENSMUSG00000102116.1"; transcript_id "ENSMUST00000186065.1"; gene_type "lincRNA"; gene_name "Gm28887"; transcript_type "lincRNA"; transcript_name "Gm28887-201"; exon_number 3; exon_id "ENSMUSE00001334128.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048049.1"; havana_transcript "OTTMUST00000123485.1";
mm10-chrY	HAVANA	gene	44821007	44823896	.	+	.	gene_id "ENSMUSG00000101649.1"; gene_type "lincRNA"; gene_name "Gm29444"; level 2; havana_gene "OTTMUSG00000048050.1";
mm10-chrY	HAVANA	transcript	44821007	44823896	.	+	.	gene_id "ENSMUSG00000101649.1"; transcript_id "ENSMUST00000187152.1"; gene_type "lincRNA"; gene_name "Gm29444"; transcript_type "lincRNA"; transcript_name "Gm29444-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048050.1"; havana_transcript "OTTMUST00000123486.1";
mm10-chrY	HAVANA	exon	44821007	44821301	.	+	.	gene_id "ENSMUSG00000101649.1"; transcript_id "ENSMUST00000187152.1"; gene_type "lincRNA"; gene_name "Gm29444"; transcript_type "lincRNA"; transcript_name "Gm29444-201"; exon_number 1; exon_id "ENSMUSE00001318321.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048050.1"; havana_transcript "OTTMUST00000123486.1";
mm10-chrY	HAVANA	exon	44821785	44821970	.	+	.	gene_id "ENSMUSG00000101649.1"; transcript_id "ENSMUST00000187152.1"; gene_type "lincRNA"; gene_name "Gm29444"; transcript_type "lincRNA"; transcript_name "Gm29444-201"; exon_number 2; exon_id "ENSMUSE00001326468.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048050.1"; havana_transcript "OTTMUST00000123486.1";
mm10-chrY	HAVANA	exon	44822695	44822878	.	+	.	gene_id "ENSMUSG00000101649.1"; transcript_id "ENSMUST00000187152.1"; gene_type "lincRNA"; gene_name "Gm29444"; transcript_type "lincRNA"; transcript_name "Gm29444-201"; exon_number 3; exon_id "ENSMUSE00001329024.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048050.1"; havana_transcript "OTTMUST00000123486.1";
mm10-chrY	HAVANA	exon	44823406	44823896	.	+	.	gene_id "ENSMUSG00000101649.1"; transcript_id "ENSMUST00000187152.1"; gene_type "lincRNA"; gene_name "Gm29444"; transcript_type "lincRNA"; transcript_name "Gm29444-201"; exon_number 4; exon_id "ENSMUSE00001320595.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048050.1"; havana_transcript "OTTMUST00000123486.1";
mm10-chrY	HAVANA	transcript	44821116	44823474	.	+	.	gene_id "ENSMUSG00000101649.1"; transcript_id "ENSMUST00000191334.1"; gene_type "lincRNA"; gene_name "Gm29444"; transcript_type "lincRNA"; transcript_name "Gm29444-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048050.1"; havana_transcript "OTTMUST00000123487.1";
mm10-chrY	HAVANA	exon	44821116	44821301	.	+	.	gene_id "ENSMUSG00000101649.1"; transcript_id "ENSMUST00000191334.1"; gene_type "lincRNA"; gene_name "Gm29444"; transcript_type "lincRNA"; transcript_name "Gm29444-202"; exon_number 1; exon_id "ENSMUSE00001326325.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048050.1"; havana_transcript "OTTMUST00000123487.1";
mm10-chrY	HAVANA	exon	44821789	44821970	.	+	.	gene_id "ENSMUSG00000101649.1"; transcript_id "ENSMUST00000191334.1"; gene_type "lincRNA"; gene_name "Gm29444"; transcript_type "lincRNA"; transcript_name "Gm29444-202"; exon_number 2; exon_id "ENSMUSE00001334406.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048050.1"; havana_transcript "OTTMUST00000123487.1";
mm10-chrY	HAVANA	exon	44823406	44823474	.	+	.	gene_id "ENSMUSG00000101649.1"; transcript_id "ENSMUST00000191334.1"; gene_type "lincRNA"; gene_name "Gm29444"; transcript_type "lincRNA"; transcript_name "Gm29444-202"; exon_number 3; exon_id "ENSMUSE00001332129.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048050.1"; havana_transcript "OTTMUST00000123487.1";
mm10-chrY	ENSEMBL	gene	44980580	44981263	.	-	.	gene_id "ENSMUSG00000095353.1"; gene_type "protein_coding"; gene_name "Gm21783"; level 3;
mm10-chrY	ENSEMBL	transcript	44980580	44981263	.	-	.	gene_id "ENSMUSG00000095353.1"; transcript_id "ENSMUST00000179570.1"; gene_type "protein_coding"; gene_name "Gm21783"; transcript_type "protein_coding"; transcript_name "Gm21783-201"; level 3; protein_id "ENSMUSP00000136130.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	44980580	44981263	.	-	.	gene_id "ENSMUSG00000095353.1"; transcript_id "ENSMUST00000179570.1"; gene_type "protein_coding"; gene_name "Gm21783"; transcript_type "protein_coding"; transcript_name "Gm21783-201"; exon_number 1; exon_id "ENSMUSE00001025008.1"; level 3; protein_id "ENSMUSP00000136130.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	44980583	44981263	.	-	0	gene_id "ENSMUSG00000095353.1"; transcript_id "ENSMUST00000179570.1"; gene_type "protein_coding"; gene_name "Gm21783"; transcript_type "protein_coding"; transcript_name "Gm21783-201"; exon_number 1; exon_id "ENSMUSE00001025008.1"; level 3; protein_id "ENSMUSP00000136130.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	44981261	44981263	.	-	0	gene_id "ENSMUSG00000095353.1"; transcript_id "ENSMUST00000179570.1"; gene_type "protein_coding"; gene_name "Gm21783"; transcript_type "protein_coding"; transcript_name "Gm21783-201"; exon_number 1; exon_id "ENSMUSE00001025008.1"; level 3; protein_id "ENSMUSP00000136130.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	44980580	44980582	.	-	0	gene_id "ENSMUSG00000095353.1"; transcript_id "ENSMUST00000179570.1"; gene_type "protein_coding"; gene_name "Gm21783"; transcript_type "protein_coding"; transcript_name "Gm21783-201"; exon_number 1; exon_id "ENSMUSE00001025008.1"; level 3; protein_id "ENSMUSP00000136130.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	44980580	44980582	.	-	.	gene_id "ENSMUSG00000095353.1"; transcript_id "ENSMUST00000179570.1"; gene_type "protein_coding"; gene_name "Gm21783"; transcript_type "protein_coding"; transcript_name "Gm21783-201"; exon_number 1; exon_id "ENSMUSE00001025008.1"; level 3; protein_id "ENSMUSP00000136130.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	45044002	45047234	.	+	.	gene_id "ENSMUSG00000101802.1"; gene_type "lincRNA"; gene_name "Gm29445"; level 2; havana_gene "OTTMUSG00000048051.1";
mm10-chrY	HAVANA	transcript	45044002	45047234	.	+	.	gene_id "ENSMUSG00000101802.1"; transcript_id "ENSMUST00000189947.1"; gene_type "lincRNA"; gene_name "Gm29445"; transcript_type "lincRNA"; transcript_name "Gm29445-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048051.1"; havana_transcript "OTTMUST00000123488.1";
mm10-chrY	HAVANA	exon	45044002	45044640	.	+	.	gene_id "ENSMUSG00000101802.1"; transcript_id "ENSMUST00000189947.1"; gene_type "lincRNA"; gene_name "Gm29445"; transcript_type "lincRNA"; transcript_name "Gm29445-202"; exon_number 1; exon_id "ENSMUSE00001332201.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048051.1"; havana_transcript "OTTMUST00000123488.1";
mm10-chrY	HAVANA	exon	45045124	45045309	.	+	.	gene_id "ENSMUSG00000101802.1"; transcript_id "ENSMUST00000189947.1"; gene_type "lincRNA"; gene_name "Gm29445"; transcript_type "lincRNA"; transcript_name "Gm29445-202"; exon_number 2; exon_id "ENSMUSE00001326138.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048051.1"; havana_transcript "OTTMUST00000123488.1";
mm10-chrY	HAVANA	exon	45046036	45046219	.	+	.	gene_id "ENSMUSG00000101802.1"; transcript_id "ENSMUST00000189947.1"; gene_type "lincRNA"; gene_name "Gm29445"; transcript_type "lincRNA"; transcript_name "Gm29445-202"; exon_number 3; exon_id "ENSMUSE00001331139.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048051.1"; havana_transcript "OTTMUST00000123488.1";
mm10-chrY	HAVANA	exon	45046747	45047234	.	+	.	gene_id "ENSMUSG00000101802.1"; transcript_id "ENSMUST00000189947.1"; gene_type "lincRNA"; gene_name "Gm29445"; transcript_type "lincRNA"; transcript_name "Gm29445-202"; exon_number 4; exon_id "ENSMUSE00001327172.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048051.1"; havana_transcript "OTTMUST00000123488.1";
mm10-chrY	HAVANA	transcript	45044455	45046815	.	+	.	gene_id "ENSMUSG00000101802.1"; transcript_id "ENSMUST00000188849.1"; gene_type "lincRNA"; gene_name "Gm29445"; transcript_type "lincRNA"; transcript_name "Gm29445-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048051.1"; havana_transcript "OTTMUST00000123489.1";
mm10-chrY	HAVANA	exon	45044455	45044640	.	+	.	gene_id "ENSMUSG00000101802.1"; transcript_id "ENSMUST00000188849.1"; gene_type "lincRNA"; gene_name "Gm29445"; transcript_type "lincRNA"; transcript_name "Gm29445-201"; exon_number 1; exon_id "ENSMUSE00001335595.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048051.1"; havana_transcript "OTTMUST00000123489.1";
mm10-chrY	HAVANA	exon	45045128	45045309	.	+	.	gene_id "ENSMUSG00000101802.1"; transcript_id "ENSMUST00000188849.1"; gene_type "lincRNA"; gene_name "Gm29445"; transcript_type "lincRNA"; transcript_name "Gm29445-201"; exon_number 2; exon_id "ENSMUSE00001325906.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048051.1"; havana_transcript "OTTMUST00000123489.1";
mm10-chrY	HAVANA	exon	45046747	45046815	.	+	.	gene_id "ENSMUSG00000101802.1"; transcript_id "ENSMUST00000188849.1"; gene_type "lincRNA"; gene_name "Gm29445"; transcript_type "lincRNA"; transcript_name "Gm29445-201"; exon_number 3; exon_id "ENSMUSE00001323161.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048051.1"; havana_transcript "OTTMUST00000123489.1";
mm10-chrY	HAVANA	gene	45225740	45228971	.	+	.	gene_id "ENSMUSG00000099790.1"; gene_type "lincRNA"; gene_name "Gm28457"; level 2; havana_gene "OTTMUSG00000048060.1";
mm10-chrY	HAVANA	transcript	45225740	45228971	.	+	.	gene_id "ENSMUSG00000099790.1"; transcript_id "ENSMUST00000191277.1"; gene_type "lincRNA"; gene_name "Gm28457"; transcript_type "lincRNA"; transcript_name "Gm28457-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048060.1"; havana_transcript "OTTMUST00000123500.1";
mm10-chrY	HAVANA	exon	45225740	45226378	.	+	.	gene_id "ENSMUSG00000099790.1"; transcript_id "ENSMUST00000191277.1"; gene_type "lincRNA"; gene_name "Gm28457"; transcript_type "lincRNA"; transcript_name "Gm28457-202"; exon_number 1; exon_id "ENSMUSE00001319291.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048060.1"; havana_transcript "OTTMUST00000123500.1";
mm10-chrY	HAVANA	exon	45226862	45227047	.	+	.	gene_id "ENSMUSG00000099790.1"; transcript_id "ENSMUST00000191277.1"; gene_type "lincRNA"; gene_name "Gm28457"; transcript_type "lincRNA"; transcript_name "Gm28457-202"; exon_number 2; exon_id "ENSMUSE00001325353.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048060.1"; havana_transcript "OTTMUST00000123500.1";
mm10-chrY	HAVANA	exon	45227772	45227955	.	+	.	gene_id "ENSMUSG00000099790.1"; transcript_id "ENSMUST00000191277.1"; gene_type "lincRNA"; gene_name "Gm28457"; transcript_type "lincRNA"; transcript_name "Gm28457-202"; exon_number 3; exon_id "ENSMUSE00001325679.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048060.1"; havana_transcript "OTTMUST00000123500.1";
mm10-chrY	HAVANA	exon	45228483	45228971	.	+	.	gene_id "ENSMUSG00000099790.1"; transcript_id "ENSMUST00000191277.1"; gene_type "lincRNA"; gene_name "Gm28457"; transcript_type "lincRNA"; transcript_name "Gm28457-202"; exon_number 4; exon_id "ENSMUSE00001334188.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048060.1"; havana_transcript "OTTMUST00000123500.1";
mm10-chrY	HAVANA	transcript	45226193	45228551	.	+	.	gene_id "ENSMUSG00000099790.1"; transcript_id "ENSMUST00000190411.1"; gene_type "lincRNA"; gene_name "Gm28457"; transcript_type "lincRNA"; transcript_name "Gm28457-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048060.1"; havana_transcript "OTTMUST00000123501.1";
mm10-chrY	HAVANA	exon	45226193	45226378	.	+	.	gene_id "ENSMUSG00000099790.1"; transcript_id "ENSMUST00000190411.1"; gene_type "lincRNA"; gene_name "Gm28457"; transcript_type "lincRNA"; transcript_name "Gm28457-201"; exon_number 1; exon_id "ENSMUSE00001330881.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048060.1"; havana_transcript "OTTMUST00000123501.1";
mm10-chrY	HAVANA	exon	45226866	45227047	.	+	.	gene_id "ENSMUSG00000099790.1"; transcript_id "ENSMUST00000190411.1"; gene_type "lincRNA"; gene_name "Gm28457"; transcript_type "lincRNA"; transcript_name "Gm28457-201"; exon_number 2; exon_id "ENSMUSE00001326872.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048060.1"; havana_transcript "OTTMUST00000123501.1";
mm10-chrY	HAVANA	exon	45228483	45228551	.	+	.	gene_id "ENSMUSG00000099790.1"; transcript_id "ENSMUST00000190411.1"; gene_type "lincRNA"; gene_name "Gm28457"; transcript_type "lincRNA"; transcript_name "Gm28457-201"; exon_number 3; exon_id "ENSMUSE00001333565.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048060.1"; havana_transcript "OTTMUST00000123501.1";
mm10-chrY	HAVANA	gene	45385636	45386331	.	-	.	gene_id "ENSMUSG00000101594.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21779"; level 2; havana_gene "OTTMUSG00000048061.1";
mm10-chrY	HAVANA	transcript	45385636	45386331	.	-	.	gene_id "ENSMUSG00000101594.1"; transcript_id "ENSMUST00000189508.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21779"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21779-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048061.1"; havana_transcript "OTTMUST00000123502.1";
mm10-chrY	HAVANA	exon	45385636	45386331	.	-	.	gene_id "ENSMUSG00000101594.1"; transcript_id "ENSMUST00000189508.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21779"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21779-201"; exon_number 1; exon_id "ENSMUSE00001323758.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048061.1"; havana_transcript "OTTMUST00000123502.1";
mm10-chrY	HAVANA	gene	45448960	45452192	.	+	.	gene_id "ENSMUSG00000100011.1"; gene_type "lincRNA"; gene_name "Gm28458"; level 2; havana_gene "OTTMUSG00000048062.1";
mm10-chrY	HAVANA	transcript	45448960	45452192	.	+	.	gene_id "ENSMUSG00000100011.1"; transcript_id "ENSMUST00000190542.1"; gene_type "lincRNA"; gene_name "Gm28458"; transcript_type "lincRNA"; transcript_name "Gm28458-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048062.1"; havana_transcript "OTTMUST00000123503.1";
mm10-chrY	HAVANA	exon	45448960	45449598	.	+	.	gene_id "ENSMUSG00000100011.1"; transcript_id "ENSMUST00000190542.1"; gene_type "lincRNA"; gene_name "Gm28458"; transcript_type "lincRNA"; transcript_name "Gm28458-202"; exon_number 1; exon_id "ENSMUSE00001332934.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048062.1"; havana_transcript "OTTMUST00000123503.1";
mm10-chrY	HAVANA	exon	45450082	45450267	.	+	.	gene_id "ENSMUSG00000100011.1"; transcript_id "ENSMUST00000190542.1"; gene_type "lincRNA"; gene_name "Gm28458"; transcript_type "lincRNA"; transcript_name "Gm28458-202"; exon_number 2; exon_id "ENSMUSE00001329811.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048062.1"; havana_transcript "OTTMUST00000123503.1";
mm10-chrY	HAVANA	exon	45450994	45451177	.	+	.	gene_id "ENSMUSG00000100011.1"; transcript_id "ENSMUST00000190542.1"; gene_type "lincRNA"; gene_name "Gm28458"; transcript_type "lincRNA"; transcript_name "Gm28458-202"; exon_number 3; exon_id "ENSMUSE00001319595.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048062.1"; havana_transcript "OTTMUST00000123503.1";
mm10-chrY	HAVANA	exon	45451705	45452192	.	+	.	gene_id "ENSMUSG00000100011.1"; transcript_id "ENSMUST00000190542.1"; gene_type "lincRNA"; gene_name "Gm28458"; transcript_type "lincRNA"; transcript_name "Gm28458-202"; exon_number 4; exon_id "ENSMUSE00001323566.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048062.1"; havana_transcript "OTTMUST00000123503.1";
mm10-chrY	HAVANA	transcript	45449413	45451773	.	+	.	gene_id "ENSMUSG00000100011.1"; transcript_id "ENSMUST00000189883.1"; gene_type "lincRNA"; gene_name "Gm28458"; transcript_type "lincRNA"; transcript_name "Gm28458-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048062.1"; havana_transcript "OTTMUST00000123504.1";
mm10-chrY	HAVANA	exon	45449413	45449598	.	+	.	gene_id "ENSMUSG00000100011.1"; transcript_id "ENSMUST00000189883.1"; gene_type "lincRNA"; gene_name "Gm28458"; transcript_type "lincRNA"; transcript_name "Gm28458-201"; exon_number 1; exon_id "ENSMUSE00001324720.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048062.1"; havana_transcript "OTTMUST00000123504.1";
mm10-chrY	HAVANA	exon	45450086	45450267	.	+	.	gene_id "ENSMUSG00000100011.1"; transcript_id "ENSMUST00000189883.1"; gene_type "lincRNA"; gene_name "Gm28458"; transcript_type "lincRNA"; transcript_name "Gm28458-201"; exon_number 2; exon_id "ENSMUSE00001334334.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048062.1"; havana_transcript "OTTMUST00000123504.1";
mm10-chrY	HAVANA	exon	45451705	45451773	.	+	.	gene_id "ENSMUSG00000100011.1"; transcript_id "ENSMUST00000189883.1"; gene_type "lincRNA"; gene_name "Gm28458"; transcript_type "lincRNA"; transcript_name "Gm28458-201"; exon_number 3; exon_id "ENSMUSE00001332567.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048062.1"; havana_transcript "OTTMUST00000123504.1";
mm10-chrY	HAVANA	gene	45753298	45753993	.	-	.	gene_id "ENSMUSG00000100974.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28459"; level 2; havana_gene "OTTMUSG00000048065.1";
mm10-chrY	HAVANA	transcript	45753298	45753993	.	-	.	gene_id "ENSMUSG00000100974.1"; transcript_id "ENSMUST00000191319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28459"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28459-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048065.1"; havana_transcript "OTTMUST00000123507.1";
mm10-chrY	HAVANA	exon	45753298	45753993	.	-	.	gene_id "ENSMUSG00000100974.1"; transcript_id "ENSMUST00000191319.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28459"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28459-201"; exon_number 1; exon_id "ENSMUSE00001319405.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048065.1"; havana_transcript "OTTMUST00000123507.1";
mm10-chrY	HAVANA	gene	45788731	45789258	.	+	.	gene_id "ENSMUSG00000101675.1"; gene_type "lincRNA"; gene_name "Gm28461"; level 2; havana_gene "OTTMUSG00000048066.1";
mm10-chrY	HAVANA	transcript	45788731	45789214	.	+	.	gene_id "ENSMUSG00000101675.1"; transcript_id "ENSMUST00000190023.1"; gene_type "lincRNA"; gene_name "Gm28461"; transcript_type "lincRNA"; transcript_name "Gm28461-201"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000048066.1"; havana_transcript "OTTMUST00000123508.1";
mm10-chrY	HAVANA	exon	45788731	45789214	.	+	.	gene_id "ENSMUSG00000101675.1"; transcript_id "ENSMUST00000190023.1"; gene_type "lincRNA"; gene_name "Gm28461"; transcript_type "lincRNA"; transcript_name "Gm28461-201"; exon_number 1; exon_id "ENSMUSE00001329879.1"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000048066.1"; havana_transcript "OTTMUST00000123508.1";
mm10-chrY	HAVANA	transcript	45788731	45789258	.	+	.	gene_id "ENSMUSG00000101675.1"; transcript_id "ENSMUST00000191406.1"; gene_type "lincRNA"; gene_name "Gm28461"; transcript_type "lincRNA"; transcript_name "Gm28461-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048066.1"; havana_transcript "OTTMUST00000123509.1";
mm10-chrY	HAVANA	exon	45788731	45788835	.	+	.	gene_id "ENSMUSG00000101675.1"; transcript_id "ENSMUST00000191406.1"; gene_type "lincRNA"; gene_name "Gm28461"; transcript_type "lincRNA"; transcript_name "Gm28461-202"; exon_number 1; exon_id "ENSMUSE00001318146.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048066.1"; havana_transcript "OTTMUST00000123509.1";
mm10-chrY	HAVANA	exon	45789190	45789258	.	+	.	gene_id "ENSMUSG00000101675.1"; transcript_id "ENSMUST00000191406.1"; gene_type "lincRNA"; gene_name "Gm28461"; transcript_type "lincRNA"; transcript_name "Gm28461-202"; exon_number 2; exon_id "ENSMUSE00001329023.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048066.1"; havana_transcript "OTTMUST00000123509.1";
mm10-chrY	HAVANA	gene	45811680	45814040	.	+	.	gene_id "ENSMUSG00000100499.6"; gene_type "lincRNA"; gene_name "Gm28460"; level 2; havana_gene "OTTMUSG00000048067.1";
mm10-chrY	HAVANA	transcript	45811680	45814040	.	+	.	gene_id "ENSMUSG00000100499.6"; transcript_id "ENSMUST00000186085.6"; gene_type "lincRNA"; gene_name "Gm28460"; transcript_type "lincRNA"; transcript_name "Gm28460-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048067.1"; havana_transcript "OTTMUST00000123510.1";
mm10-chrY	HAVANA	exon	45811680	45811865	.	+	.	gene_id "ENSMUSG00000100499.6"; transcript_id "ENSMUST00000186085.6"; gene_type "lincRNA"; gene_name "Gm28460"; transcript_type "lincRNA"; transcript_name "Gm28460-201"; exon_number 1; exon_id "ENSMUSE00001329779.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048067.1"; havana_transcript "OTTMUST00000123510.1";
mm10-chrY	HAVANA	exon	45812353	45812534	.	+	.	gene_id "ENSMUSG00000100499.6"; transcript_id "ENSMUST00000186085.6"; gene_type "lincRNA"; gene_name "Gm28460"; transcript_type "lincRNA"; transcript_name "Gm28460-201"; exon_number 2; exon_id "ENSMUSE00001321500.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048067.1"; havana_transcript "OTTMUST00000123510.1";
mm10-chrY	HAVANA	exon	45813976	45814040	.	+	.	gene_id "ENSMUSG00000100499.6"; transcript_id "ENSMUST00000186085.6"; gene_type "lincRNA"; gene_name "Gm28460"; transcript_type "lincRNA"; transcript_name "Gm28460-201"; exon_number 3; exon_id "ENSMUSE00001318849.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048067.1"; havana_transcript "OTTMUST00000123510.1";
mm10-chrY	HAVANA	transcript	45811680	45814040	.	+	.	gene_id "ENSMUSG00000100499.6"; transcript_id "ENSMUST00000190590.1"; gene_type "lincRNA"; gene_name "Gm28460"; transcript_type "lincRNA"; transcript_name "Gm28460-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048067.1"; havana_transcript "OTTMUST00000123511.1";
mm10-chrY	HAVANA	exon	45811680	45811865	.	+	.	gene_id "ENSMUSG00000100499.6"; transcript_id "ENSMUST00000190590.1"; gene_type "lincRNA"; gene_name "Gm28460"; transcript_type "lincRNA"; transcript_name "Gm28460-202"; exon_number 1; exon_id "ENSMUSE00001329779.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048067.1"; havana_transcript "OTTMUST00000123511.1";
mm10-chrY	HAVANA	exon	45812353	45812534	.	+	.	gene_id "ENSMUSG00000100499.6"; transcript_id "ENSMUST00000190590.1"; gene_type "lincRNA"; gene_name "Gm28460"; transcript_type "lincRNA"; transcript_name "Gm28460-202"; exon_number 2; exon_id "ENSMUSE00001321500.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048067.1"; havana_transcript "OTTMUST00000123511.1";
mm10-chrY	HAVANA	exon	45813263	45813447	.	+	.	gene_id "ENSMUSG00000100499.6"; transcript_id "ENSMUST00000190590.1"; gene_type "lincRNA"; gene_name "Gm28460"; transcript_type "lincRNA"; transcript_name "Gm28460-202"; exon_number 3; exon_id "ENSMUSE00001326558.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048067.1"; havana_transcript "OTTMUST00000123511.1";
mm10-chrY	HAVANA	exon	45813976	45814040	.	+	.	gene_id "ENSMUSG00000100499.6"; transcript_id "ENSMUST00000190590.1"; gene_type "lincRNA"; gene_name "Gm28460"; transcript_type "lincRNA"; transcript_name "Gm28460-202"; exon_number 4; exon_id "ENSMUSE00001318849.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048067.1"; havana_transcript "OTTMUST00000123511.1";
mm10-chrY	HAVANA	gene	45851118	45851645	.	+	.	gene_id "ENSMUSG00000100256.1"; gene_type "lincRNA"; gene_name "Gm28851"; level 2; havana_gene "OTTMUSG00000048068.1";
mm10-chrY	HAVANA	transcript	45851118	45851601	.	+	.	gene_id "ENSMUSG00000100256.1"; transcript_id "ENSMUST00000189757.1"; gene_type "lincRNA"; gene_name "Gm28851"; transcript_type "lincRNA"; transcript_name "Gm28851-204"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000048068.1"; havana_transcript "OTTMUST00000123512.1";
mm10-chrY	HAVANA	exon	45851118	45851601	.	+	.	gene_id "ENSMUSG00000100256.1"; transcript_id "ENSMUST00000189757.1"; gene_type "lincRNA"; gene_name "Gm28851"; transcript_type "lincRNA"; transcript_name "Gm28851-204"; exon_number 1; exon_id "ENSMUSE00001319461.1"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000048068.1"; havana_transcript "OTTMUST00000123512.1";
mm10-chrY	HAVANA	transcript	45851118	45851645	.	+	.	gene_id "ENSMUSG00000100256.1"; transcript_id "ENSMUST00000187800.1"; gene_type "lincRNA"; gene_name "Gm28851"; transcript_type "lincRNA"; transcript_name "Gm28851-203"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048068.1"; havana_transcript "OTTMUST00000123513.1";
mm10-chrY	HAVANA	exon	45851118	45851222	.	+	.	gene_id "ENSMUSG00000100256.1"; transcript_id "ENSMUST00000187800.1"; gene_type "lincRNA"; gene_name "Gm28851"; transcript_type "lincRNA"; transcript_name "Gm28851-203"; exon_number 1; exon_id "ENSMUSE00001327163.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048068.1"; havana_transcript "OTTMUST00000123513.1";
mm10-chrY	HAVANA	exon	45851577	45851645	.	+	.	gene_id "ENSMUSG00000100256.1"; transcript_id "ENSMUST00000187800.1"; gene_type "lincRNA"; gene_name "Gm28851"; transcript_type "lincRNA"; transcript_name "Gm28851-203"; exon_number 2; exon_id "ENSMUSE00001332193.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048068.1"; havana_transcript "OTTMUST00000123513.1";
mm10-chrY	HAVANA	gene	45874035	45876398	.	+	.	gene_id "ENSMUSG00000101003.6"; gene_type "lincRNA"; gene_name "Gm28456"; level 2; havana_gene "OTTMUSG00000048069.1";
mm10-chrY	HAVANA	transcript	45874035	45876398	.	+	.	gene_id "ENSMUSG00000101003.6"; transcript_id "ENSMUST00000190521.6"; gene_type "lincRNA"; gene_name "Gm28456"; transcript_type "lincRNA"; transcript_name "Gm28456-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048069.1"; havana_transcript "OTTMUST00000123514.1";
mm10-chrY	HAVANA	exon	45874035	45874220	.	+	.	gene_id "ENSMUSG00000101003.6"; transcript_id "ENSMUST00000190521.6"; gene_type "lincRNA"; gene_name "Gm28456"; transcript_type "lincRNA"; transcript_name "Gm28456-202"; exon_number 1; exon_id "ENSMUSE00001324255.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048069.1"; havana_transcript "OTTMUST00000123514.1";
mm10-chrY	HAVANA	exon	45874708	45874889	.	+	.	gene_id "ENSMUSG00000101003.6"; transcript_id "ENSMUST00000190521.6"; gene_type "lincRNA"; gene_name "Gm28456"; transcript_type "lincRNA"; transcript_name "Gm28456-202"; exon_number 2; exon_id "ENSMUSE00001321920.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048069.1"; havana_transcript "OTTMUST00000123514.1";
mm10-chrY	HAVANA	exon	45875617	45875801	.	+	.	gene_id "ENSMUSG00000101003.6"; transcript_id "ENSMUST00000190521.6"; gene_type "lincRNA"; gene_name "Gm28456"; transcript_type "lincRNA"; transcript_name "Gm28456-202"; exon_number 3; exon_id "ENSMUSE00001324653.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048069.1"; havana_transcript "OTTMUST00000123514.1";
mm10-chrY	HAVANA	exon	45876330	45876398	.	+	.	gene_id "ENSMUSG00000101003.6"; transcript_id "ENSMUST00000190521.6"; gene_type "lincRNA"; gene_name "Gm28456"; transcript_type "lincRNA"; transcript_name "Gm28456-202"; exon_number 4; exon_id "ENSMUSE00001325439.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048069.1"; havana_transcript "OTTMUST00000123514.1";
mm10-chrY	HAVANA	transcript	45874035	45876398	.	+	.	gene_id "ENSMUSG00000101003.6"; transcript_id "ENSMUST00000185638.1"; gene_type "lincRNA"; gene_name "Gm28456"; transcript_type "lincRNA"; transcript_name "Gm28456-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048069.1"; havana_transcript "OTTMUST00000123515.1";
mm10-chrY	HAVANA	exon	45874035	45874220	.	+	.	gene_id "ENSMUSG00000101003.6"; transcript_id "ENSMUST00000185638.1"; gene_type "lincRNA"; gene_name "Gm28456"; transcript_type "lincRNA"; transcript_name "Gm28456-201"; exon_number 1; exon_id "ENSMUSE00001324255.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048069.1"; havana_transcript "OTTMUST00000123515.1";
mm10-chrY	HAVANA	exon	45874708	45874889	.	+	.	gene_id "ENSMUSG00000101003.6"; transcript_id "ENSMUST00000185638.1"; gene_type "lincRNA"; gene_name "Gm28456"; transcript_type "lincRNA"; transcript_name "Gm28456-201"; exon_number 2; exon_id "ENSMUSE00001321920.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048069.1"; havana_transcript "OTTMUST00000123515.1";
mm10-chrY	HAVANA	exon	45876330	45876398	.	+	.	gene_id "ENSMUSG00000101003.6"; transcript_id "ENSMUST00000185638.1"; gene_type "lincRNA"; gene_name "Gm28456"; transcript_type "lincRNA"; transcript_name "Gm28456-201"; exon_number 3; exon_id "ENSMUSE00001325439.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048069.1"; havana_transcript "OTTMUST00000123515.1";
mm10-chrY	HAVANA	gene	45949660	45974063	.	+	.	gene_id "ENSMUSG00000100640.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29073"; level 2; havana_gene "OTTMUSG00000048072.1";
mm10-chrY	HAVANA	transcript	45949660	45974063	.	+	.	gene_id "ENSMUSG00000100640.1"; transcript_id "ENSMUST00000185563.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29073"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29073-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048072.1"; havana_transcript "OTTMUST00000123518.1";
mm10-chrY	HAVANA	exon	45949660	45949777	.	+	.	gene_id "ENSMUSG00000100640.1"; transcript_id "ENSMUST00000185563.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29073"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29073-201"; exon_number 1; exon_id "ENSMUSE00001325658.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048072.1"; havana_transcript "OTTMUST00000123518.1";
mm10-chrY	HAVANA	exon	45955085	45955151	.	+	.	gene_id "ENSMUSG00000100640.1"; transcript_id "ENSMUST00000185563.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29073"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29073-201"; exon_number 2; exon_id "ENSMUSE00001330922.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048072.1"; havana_transcript "OTTMUST00000123518.1";
mm10-chrY	HAVANA	exon	45955739	45955773	.	+	.	gene_id "ENSMUSG00000100640.1"; transcript_id "ENSMUST00000185563.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29073"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29073-201"; exon_number 3; exon_id "ENSMUSE00001321828.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048072.1"; havana_transcript "OTTMUST00000123518.1";
mm10-chrY	HAVANA	exon	45962782	45962848	.	+	.	gene_id "ENSMUSG00000100640.1"; transcript_id "ENSMUST00000185563.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29073"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29073-201"; exon_number 4; exon_id "ENSMUSE00001328411.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048072.1"; havana_transcript "OTTMUST00000123518.1";
mm10-chrY	HAVANA	exon	45963414	45963448	.	+	.	gene_id "ENSMUSG00000100640.1"; transcript_id "ENSMUST00000185563.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29073"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29073-201"; exon_number 5; exon_id "ENSMUSE00001322348.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048072.1"; havana_transcript "OTTMUST00000123518.1";
mm10-chrY	HAVANA	exon	45970593	45970710	.	+	.	gene_id "ENSMUSG00000100640.1"; transcript_id "ENSMUST00000185563.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29073"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29073-201"; exon_number 6; exon_id "ENSMUSE00001328888.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048072.1"; havana_transcript "OTTMUST00000123518.1";
mm10-chrY	HAVANA	exon	45971457	45971556	.	+	.	gene_id "ENSMUSG00000100640.1"; transcript_id "ENSMUST00000185563.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29073"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29073-201"; exon_number 7; exon_id "ENSMUSE00001334240.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048072.1"; havana_transcript "OTTMUST00000123518.1";
mm10-chrY	HAVANA	exon	45973581	45973677	.	+	.	gene_id "ENSMUSG00000100640.1"; transcript_id "ENSMUST00000185563.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29073"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29073-201"; exon_number 8; exon_id "ENSMUSE00001334073.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048072.1"; havana_transcript "OTTMUST00000123518.1";
mm10-chrY	HAVANA	exon	45974037	45974063	.	+	.	gene_id "ENSMUSG00000100640.1"; transcript_id "ENSMUST00000185563.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29073"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29073-201"; exon_number 9; exon_id "ENSMUSE00001328075.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048072.1"; havana_transcript "OTTMUST00000123518.1";
mm10-chrY	HAVANA	gene	46347584	46348681	.	-	.	gene_id "ENSMUSG00000100628.1"; gene_type "lincRNA"; gene_name "Gm29648"; level 2; havana_gene "OTTMUSG00000048083.1";
mm10-chrY	HAVANA	transcript	46347584	46348681	.	-	.	gene_id "ENSMUSG00000100628.1"; transcript_id "ENSMUST00000188651.1"; gene_type "lincRNA"; gene_name "Gm29648"; transcript_type "lincRNA"; transcript_name "Gm29648-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048083.1"; havana_transcript "OTTMUST00000123543.1";
mm10-chrY	HAVANA	exon	46348444	46348681	.	-	.	gene_id "ENSMUSG00000100628.1"; transcript_id "ENSMUST00000188651.1"; gene_type "lincRNA"; gene_name "Gm29648"; transcript_type "lincRNA"; transcript_name "Gm29648-201"; exon_number 1; exon_id "ENSMUSE00001326102.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048083.1"; havana_transcript "OTTMUST00000123543.1";
mm10-chrY	HAVANA	exon	46347584	46347995	.	-	.	gene_id "ENSMUSG00000100628.1"; transcript_id "ENSMUST00000188651.1"; gene_type "lincRNA"; gene_name "Gm29648"; transcript_type "lincRNA"; transcript_name "Gm29648-201"; exon_number 2; exon_id "ENSMUSE00001332522.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048083.1"; havana_transcript "OTTMUST00000123543.1";
mm10-chrY	HAVANA	gene	46482580	46513022	.	+	.	gene_id "ENSMUSG00000100989.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29647"; level 2; havana_gene "OTTMUSG00000048084.1";
mm10-chrY	HAVANA	transcript	46482580	46513022	.	+	.	gene_id "ENSMUSG00000100989.1"; transcript_id "ENSMUST00000188795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29647-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048084.1"; havana_transcript "OTTMUST00000123544.1";
mm10-chrY	HAVANA	exon	46482580	46482697	.	+	.	gene_id "ENSMUSG00000100989.1"; transcript_id "ENSMUST00000188795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29647-201"; exon_number 1; exon_id "ENSMUSE00001327607.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048084.1"; havana_transcript "OTTMUST00000123544.1";
mm10-chrY	HAVANA	exon	46494084	46494150	.	+	.	gene_id "ENSMUSG00000100989.1"; transcript_id "ENSMUST00000188795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29647-201"; exon_number 2; exon_id "ENSMUSE00001329269.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048084.1"; havana_transcript "OTTMUST00000123544.1";
mm10-chrY	HAVANA	exon	46494707	46494741	.	+	.	gene_id "ENSMUSG00000100989.1"; transcript_id "ENSMUST00000188795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29647-201"; exon_number 3; exon_id "ENSMUSE00001324252.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048084.1"; havana_transcript "OTTMUST00000123544.1";
mm10-chrY	HAVANA	exon	46501785	46501851	.	+	.	gene_id "ENSMUSG00000100989.1"; transcript_id "ENSMUST00000188795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29647-201"; exon_number 4; exon_id "ENSMUSE00001334783.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048084.1"; havana_transcript "OTTMUST00000123544.1";
mm10-chrY	HAVANA	exon	46502412	46502446	.	+	.	gene_id "ENSMUSG00000100989.1"; transcript_id "ENSMUST00000188795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29647-201"; exon_number 5; exon_id "ENSMUSE00001334059.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048084.1"; havana_transcript "OTTMUST00000123544.1";
mm10-chrY	HAVANA	exon	46509559	46509676	.	+	.	gene_id "ENSMUSG00000100989.1"; transcript_id "ENSMUST00000188795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29647-201"; exon_number 6; exon_id "ENSMUSE00001330378.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048084.1"; havana_transcript "OTTMUST00000123544.1";
mm10-chrY	HAVANA	exon	46510426	46510525	.	+	.	gene_id "ENSMUSG00000100989.1"; transcript_id "ENSMUST00000188795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29647-201"; exon_number 7; exon_id "ENSMUSE00001333923.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048084.1"; havana_transcript "OTTMUST00000123544.1";
mm10-chrY	HAVANA	exon	46512539	46512637	.	+	.	gene_id "ENSMUSG00000100989.1"; transcript_id "ENSMUST00000188795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29647-201"; exon_number 8; exon_id "ENSMUSE00001322869.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048084.1"; havana_transcript "OTTMUST00000123544.1";
mm10-chrY	HAVANA	exon	46512996	46513022	.	+	.	gene_id "ENSMUSG00000100989.1"; transcript_id "ENSMUST00000188795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29647"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29647-201"; exon_number 9; exon_id "ENSMUSE00001327630.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048084.1"; havana_transcript "OTTMUST00000123544.1";
mm10-chrY	HAVANA	gene	46574765	46577998	.	+	.	gene_id "ENSMUSG00000100003.1"; gene_type "lincRNA"; gene_name "Gm29646"; level 2; havana_gene "OTTMUSG00000048085.2";
mm10-chrY	HAVANA	transcript	46574765	46577998	.	+	.	gene_id "ENSMUSG00000100003.1"; transcript_id "ENSMUST00000191146.1"; gene_type "lincRNA"; gene_name "Gm29646"; transcript_type "lincRNA"; transcript_name "Gm29646-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048085.2"; havana_transcript "OTTMUST00000123545.1";
mm10-chrY	HAVANA	exon	46574765	46575403	.	+	.	gene_id "ENSMUSG00000100003.1"; transcript_id "ENSMUST00000191146.1"; gene_type "lincRNA"; gene_name "Gm29646"; transcript_type "lincRNA"; transcript_name "Gm29646-202"; exon_number 1; exon_id "ENSMUSE00001323727.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048085.2"; havana_transcript "OTTMUST00000123545.1";
mm10-chrY	HAVANA	exon	46575888	46576070	.	+	.	gene_id "ENSMUSG00000100003.1"; transcript_id "ENSMUST00000191146.1"; gene_type "lincRNA"; gene_name "Gm29646"; transcript_type "lincRNA"; transcript_name "Gm29646-202"; exon_number 2; exon_id "ENSMUSE00001319741.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048085.2"; havana_transcript "OTTMUST00000123545.1";
mm10-chrY	HAVANA	exon	46576801	46576981	.	+	.	gene_id "ENSMUSG00000100003.1"; transcript_id "ENSMUST00000191146.1"; gene_type "lincRNA"; gene_name "Gm29646"; transcript_type "lincRNA"; transcript_name "Gm29646-202"; exon_number 3; exon_id "ENSMUSE00001319344.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048085.2"; havana_transcript "OTTMUST00000123545.1";
mm10-chrY	HAVANA	exon	46577509	46577998	.	+	.	gene_id "ENSMUSG00000100003.1"; transcript_id "ENSMUST00000191146.1"; gene_type "lincRNA"; gene_name "Gm29646"; transcript_type "lincRNA"; transcript_name "Gm29646-202"; exon_number 4; exon_id "ENSMUSE00001323976.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048085.2"; havana_transcript "OTTMUST00000123545.1";
mm10-chrY	HAVANA	transcript	46575218	46577574	.	+	.	gene_id "ENSMUSG00000100003.1"; transcript_id "ENSMUST00000190248.1"; gene_type "lincRNA"; gene_name "Gm29646"; transcript_type "lincRNA"; transcript_name "Gm29646-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048085.2"; havana_transcript "OTTMUST00000123583.1";
mm10-chrY	HAVANA	exon	46575218	46575403	.	+	.	gene_id "ENSMUSG00000100003.1"; transcript_id "ENSMUST00000190248.1"; gene_type "lincRNA"; gene_name "Gm29646"; transcript_type "lincRNA"; transcript_name "Gm29646-201"; exon_number 1; exon_id "ENSMUSE00001321339.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048085.2"; havana_transcript "OTTMUST00000123583.1";
mm10-chrY	HAVANA	exon	46575892	46576070	.	+	.	gene_id "ENSMUSG00000100003.1"; transcript_id "ENSMUST00000190248.1"; gene_type "lincRNA"; gene_name "Gm29646"; transcript_type "lincRNA"; transcript_name "Gm29646-201"; exon_number 2; exon_id "ENSMUSE00001327492.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048085.2"; havana_transcript "OTTMUST00000123583.1";
mm10-chrY	HAVANA	exon	46577509	46577574	.	+	.	gene_id "ENSMUSG00000100003.1"; transcript_id "ENSMUST00000190248.1"; gene_type "lincRNA"; gene_name "Gm29646"; transcript_type "lincRNA"; transcript_name "Gm29646-201"; exon_number 3; exon_id "ENSMUSE00001323851.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048085.2"; havana_transcript "OTTMUST00000123583.1";
mm10-chrY	HAVANA	gene	46603660	46606894	.	+	.	gene_id "ENSMUSG00000099462.1"; gene_type "lincRNA"; gene_name "Gm28549"; level 2; havana_gene "OTTMUSG00000048103.1";
mm10-chrY	HAVANA	transcript	46603660	46606894	.	+	.	gene_id "ENSMUSG00000099462.1"; transcript_id "ENSMUST00000191354.1"; gene_type "lincRNA"; gene_name "Gm28549"; transcript_type "lincRNA"; transcript_name "Gm28549-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048103.1"; havana_transcript "OTTMUST00000123584.1";
mm10-chrY	HAVANA	exon	46603660	46604297	.	+	.	gene_id "ENSMUSG00000099462.1"; transcript_id "ENSMUST00000191354.1"; gene_type "lincRNA"; gene_name "Gm28549"; transcript_type "lincRNA"; transcript_name "Gm28549-202"; exon_number 1; exon_id "ENSMUSE00001318374.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048103.1"; havana_transcript "OTTMUST00000123584.1";
mm10-chrY	HAVANA	exon	46604781	46604966	.	+	.	gene_id "ENSMUSG00000099462.1"; transcript_id "ENSMUST00000191354.1"; gene_type "lincRNA"; gene_name "Gm28549"; transcript_type "lincRNA"; transcript_name "Gm28549-202"; exon_number 2; exon_id "ENSMUSE00001323772.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048103.1"; havana_transcript "OTTMUST00000123584.1";
mm10-chrY	HAVANA	exon	46605694	46605877	.	+	.	gene_id "ENSMUSG00000099462.1"; transcript_id "ENSMUST00000191354.1"; gene_type "lincRNA"; gene_name "Gm28549"; transcript_type "lincRNA"; transcript_name "Gm28549-202"; exon_number 3; exon_id "ENSMUSE00001318602.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048103.1"; havana_transcript "OTTMUST00000123584.1";
mm10-chrY	HAVANA	exon	46606406	46606894	.	+	.	gene_id "ENSMUSG00000099462.1"; transcript_id "ENSMUST00000191354.1"; gene_type "lincRNA"; gene_name "Gm28549"; transcript_type "lincRNA"; transcript_name "Gm28549-202"; exon_number 4; exon_id "ENSMUSE00001326275.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048103.1"; havana_transcript "OTTMUST00000123584.1";
mm10-chrY	HAVANA	transcript	46604113	46606474	.	+	.	gene_id "ENSMUSG00000099462.1"; transcript_id "ENSMUST00000187473.1"; gene_type "lincRNA"; gene_name "Gm28549"; transcript_type "lincRNA"; transcript_name "Gm28549-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048103.1"; havana_transcript "OTTMUST00000123585.1";
mm10-chrY	HAVANA	exon	46604113	46604297	.	+	.	gene_id "ENSMUSG00000099462.1"; transcript_id "ENSMUST00000187473.1"; gene_type "lincRNA"; gene_name "Gm28549"; transcript_type "lincRNA"; transcript_name "Gm28549-201"; exon_number 1; exon_id "ENSMUSE00001318164.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048103.1"; havana_transcript "OTTMUST00000123585.1";
mm10-chrY	HAVANA	exon	46604785	46604966	.	+	.	gene_id "ENSMUSG00000099462.1"; transcript_id "ENSMUST00000187473.1"; gene_type "lincRNA"; gene_name "Gm28549"; transcript_type "lincRNA"; transcript_name "Gm28549-201"; exon_number 2; exon_id "ENSMUSE00001318416.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048103.1"; havana_transcript "OTTMUST00000123585.1";
mm10-chrY	HAVANA	exon	46606406	46606474	.	+	.	gene_id "ENSMUSG00000099462.1"; transcript_id "ENSMUST00000187473.1"; gene_type "lincRNA"; gene_name "Gm28549"; transcript_type "lincRNA"; transcript_name "Gm28549-201"; exon_number 3; exon_id "ENSMUSE00001319916.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048103.1"; havana_transcript "OTTMUST00000123585.1";
mm10-chrY	HAVANA	gene	46692893	46717285	.	-	.	gene_id "ENSMUSG00000101434.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29211"; level 2; havana_gene "OTTMUSG00000048104.1";
mm10-chrY	HAVANA	transcript	46692893	46717285	.	-	.	gene_id "ENSMUSG00000101434.1"; transcript_id "ENSMUST00000191470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29211-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048104.1"; havana_transcript "OTTMUST00000123586.1";
mm10-chrY	HAVANA	exon	46717168	46717285	.	-	.	gene_id "ENSMUSG00000101434.1"; transcript_id "ENSMUST00000191470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29211-201"; exon_number 1; exon_id "ENSMUSE00001333242.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048104.1"; havana_transcript "OTTMUST00000123586.1";
mm10-chrY	HAVANA	exon	46711795	46711861	.	-	.	gene_id "ENSMUSG00000101434.1"; transcript_id "ENSMUST00000191470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29211-201"; exon_number 2; exon_id "ENSMUSE00001331363.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048104.1"; havana_transcript "OTTMUST00000123586.1";
mm10-chrY	HAVANA	exon	46711179	46711213	.	-	.	gene_id "ENSMUSG00000101434.1"; transcript_id "ENSMUST00000191470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29211-201"; exon_number 3; exon_id "ENSMUSE00001325634.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048104.1"; havana_transcript "OTTMUST00000123586.1";
mm10-chrY	HAVANA	exon	46704105	46704171	.	-	.	gene_id "ENSMUSG00000101434.1"; transcript_id "ENSMUST00000191470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29211-201"; exon_number 4; exon_id "ENSMUSE00001320211.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048104.1"; havana_transcript "OTTMUST00000123586.1";
mm10-chrY	HAVANA	exon	46703505	46703539	.	-	.	gene_id "ENSMUSG00000101434.1"; transcript_id "ENSMUST00000191470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29211-201"; exon_number 5; exon_id "ENSMUSE00001331503.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048104.1"; havana_transcript "OTTMUST00000123586.1";
mm10-chrY	HAVANA	exon	46696246	46696363	.	-	.	gene_id "ENSMUSG00000101434.1"; transcript_id "ENSMUST00000191470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29211-201"; exon_number 6; exon_id "ENSMUSE00001330463.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048104.1"; havana_transcript "OTTMUST00000123586.1";
mm10-chrY	HAVANA	exon	46695400	46695499	.	-	.	gene_id "ENSMUSG00000101434.1"; transcript_id "ENSMUST00000191470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29211-201"; exon_number 7; exon_id "ENSMUSE00001318311.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048104.1"; havana_transcript "OTTMUST00000123586.1";
mm10-chrY	HAVANA	exon	46693279	46693375	.	-	.	gene_id "ENSMUSG00000101434.1"; transcript_id "ENSMUST00000191470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29211-201"; exon_number 8; exon_id "ENSMUSE00001325932.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048104.1"; havana_transcript "OTTMUST00000123586.1";
mm10-chrY	HAVANA	exon	46692893	46692919	.	-	.	gene_id "ENSMUSG00000101434.1"; transcript_id "ENSMUST00000191470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29211"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29211-201"; exon_number 9; exon_id "ENSMUSE00001334489.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048104.1"; havana_transcript "OTTMUST00000123586.1";
mm10-chrY	HAVANA	gene	46727776	46728390	.	+	.	gene_id "ENSMUSG00000100061.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29212"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048105.1";
mm10-chrY	HAVANA	transcript	46727776	46728390	.	+	.	gene_id "ENSMUSG00000100061.1"; transcript_id "ENSMUST00000190384.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29212"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29212-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048105.1"; havana_transcript "OTTMUST00000123587.1";
mm10-chrY	HAVANA	exon	46727776	46728390	.	+	.	gene_id "ENSMUSG00000100061.1"; transcript_id "ENSMUST00000190384.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29212"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29212-201"; exon_number 1; exon_id "ENSMUSE00001333485.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048105.1"; havana_transcript "OTTMUST00000123587.1";
mm10-chrY	HAVANA	gene	46757399	46758091	.	+	.	gene_id "ENSMUSG00000100611.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21247"; level 2; havana_gene "OTTMUSG00000048106.1";
mm10-chrY	HAVANA	transcript	46757399	46758091	.	+	.	gene_id "ENSMUSG00000100611.1"; transcript_id "ENSMUST00000189954.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21247"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21247-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048106.1"; havana_transcript "OTTMUST00000123588.1";
mm10-chrY	HAVANA	exon	46757399	46758091	.	+	.	gene_id "ENSMUSG00000100611.1"; transcript_id "ENSMUST00000189954.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21247"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21247-201"; exon_number 1; exon_id "ENSMUSE00001321830.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048106.1"; havana_transcript "OTTMUST00000123588.1";
mm10-chrY	HAVANA	gene	46847641	46850004	.	-	.	gene_id "ENSMUSG00000101138.6"; gene_type "lincRNA"; gene_name "Gm29210"; level 2; havana_gene "OTTMUSG00000048107.1";
mm10-chrY	HAVANA	transcript	46847641	46850004	.	-	.	gene_id "ENSMUSG00000101138.6"; transcript_id "ENSMUST00000186332.5"; gene_type "lincRNA"; gene_name "Gm29210"; transcript_type "lincRNA"; transcript_name "Gm29210-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048107.1"; havana_transcript "OTTMUST00000123589.1";
mm10-chrY	HAVANA	exon	46849819	46850004	.	-	.	gene_id "ENSMUSG00000101138.6"; transcript_id "ENSMUST00000186332.5"; gene_type "lincRNA"; gene_name "Gm29210"; transcript_type "lincRNA"; transcript_name "Gm29210-201"; exon_number 1; exon_id "ENSMUSE00001325102.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048107.1"; havana_transcript "OTTMUST00000123589.1";
mm10-chrY	HAVANA	exon	46849150	46849331	.	-	.	gene_id "ENSMUSG00000101138.6"; transcript_id "ENSMUST00000186332.5"; gene_type "lincRNA"; gene_name "Gm29210"; transcript_type "lincRNA"; transcript_name "Gm29210-201"; exon_number 2; exon_id "ENSMUSE00001328143.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048107.1"; havana_transcript "OTTMUST00000123589.1";
mm10-chrY	HAVANA	exon	46848238	46848422	.	-	.	gene_id "ENSMUSG00000101138.6"; transcript_id "ENSMUST00000186332.5"; gene_type "lincRNA"; gene_name "Gm29210"; transcript_type "lincRNA"; transcript_name "Gm29210-201"; exon_number 3; exon_id "ENSMUSE00001318185.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048107.1"; havana_transcript "OTTMUST00000123589.1";
mm10-chrY	HAVANA	exon	46847641	46847709	.	-	.	gene_id "ENSMUSG00000101138.6"; transcript_id "ENSMUST00000186332.5"; gene_type "lincRNA"; gene_name "Gm29210"; transcript_type "lincRNA"; transcript_name "Gm29210-201"; exon_number 4; exon_id "ENSMUSE00001327756.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048107.1"; havana_transcript "OTTMUST00000123589.1";
mm10-chrY	HAVANA	transcript	46847641	46850004	.	-	.	gene_id "ENSMUSG00000101138.6"; transcript_id "ENSMUST00000187495.2"; gene_type "lincRNA"; gene_name "Gm29210"; transcript_type "lincRNA"; transcript_name "Gm29210-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048107.1"; havana_transcript "OTTMUST00000123590.1";
mm10-chrY	HAVANA	exon	46849819	46850004	.	-	.	gene_id "ENSMUSG00000101138.6"; transcript_id "ENSMUST00000187495.2"; gene_type "lincRNA"; gene_name "Gm29210"; transcript_type "lincRNA"; transcript_name "Gm29210-202"; exon_number 1; exon_id "ENSMUSE00001325102.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048107.1"; havana_transcript "OTTMUST00000123590.1";
mm10-chrY	HAVANA	exon	46849150	46849331	.	-	.	gene_id "ENSMUSG00000101138.6"; transcript_id "ENSMUST00000187495.2"; gene_type "lincRNA"; gene_name "Gm29210"; transcript_type "lincRNA"; transcript_name "Gm29210-202"; exon_number 2; exon_id "ENSMUSE00001328143.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048107.1"; havana_transcript "OTTMUST00000123590.1";
mm10-chrY	HAVANA	exon	46847641	46847709	.	-	.	gene_id "ENSMUSG00000101138.6"; transcript_id "ENSMUST00000187495.2"; gene_type "lincRNA"; gene_name "Gm29210"; transcript_type "lincRNA"; transcript_name "Gm29210-202"; exon_number 3; exon_id "ENSMUSE00001327756.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048107.1"; havana_transcript "OTTMUST00000123590.1";
mm10-chrY	HAVANA	gene	46872413	46872940	.	-	.	gene_id "ENSMUSG00000100871.1"; gene_type "lincRNA"; gene_name "Gm29213"; level 2; havana_gene "OTTMUSG00000048108.1";
mm10-chrY	HAVANA	transcript	46872413	46872940	.	-	.	gene_id "ENSMUSG00000100871.1"; transcript_id "ENSMUST00000186199.1"; gene_type "lincRNA"; gene_name "Gm29213"; transcript_type "lincRNA"; transcript_name "Gm29213-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048108.1"; havana_transcript "OTTMUST00000123591.1";
mm10-chrY	HAVANA	exon	46872836	46872940	.	-	.	gene_id "ENSMUSG00000100871.1"; transcript_id "ENSMUST00000186199.1"; gene_type "lincRNA"; gene_name "Gm29213"; transcript_type "lincRNA"; transcript_name "Gm29213-201"; exon_number 1; exon_id "ENSMUSE00001331551.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048108.1"; havana_transcript "OTTMUST00000123591.1";
mm10-chrY	HAVANA	exon	46872413	46872481	.	-	.	gene_id "ENSMUSG00000100871.1"; transcript_id "ENSMUST00000186199.1"; gene_type "lincRNA"; gene_name "Gm29213"; transcript_type "lincRNA"; transcript_name "Gm29213-201"; exon_number 2; exon_id "ENSMUSE00001330878.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048108.1"; havana_transcript "OTTMUST00000123591.1";
mm10-chrY	HAVANA	transcript	46872457	46872940	.	-	.	gene_id "ENSMUSG00000100871.1"; transcript_id "ENSMUST00000189703.1"; gene_type "lincRNA"; gene_name "Gm29213"; transcript_type "lincRNA"; transcript_name "Gm29213-202"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048108.1"; havana_transcript "OTTMUST00000123592.1";
mm10-chrY	HAVANA	exon	46872457	46872940	.	-	.	gene_id "ENSMUSG00000100871.1"; transcript_id "ENSMUST00000189703.1"; gene_type "lincRNA"; gene_name "Gm29213"; transcript_type "lincRNA"; transcript_name "Gm29213-202"; exon_number 1; exon_id "ENSMUSE00001319856.1"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048108.1"; havana_transcript "OTTMUST00000123592.1";
mm10-chrY	HAVANA	gene	46910030	46912390	.	-	.	gene_id "ENSMUSG00000100716.6"; gene_type "lincRNA"; gene_name "Gm28550"; level 2; havana_gene "OTTMUSG00000048109.1";
mm10-chrY	HAVANA	transcript	46910030	46912390	.	-	.	gene_id "ENSMUSG00000100716.6"; transcript_id "ENSMUST00000190596.6"; gene_type "lincRNA"; gene_name "Gm28550"; transcript_type "lincRNA"; transcript_name "Gm28550-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048109.1"; havana_transcript "OTTMUST00000123593.1";
mm10-chrY	HAVANA	exon	46912205	46912390	.	-	.	gene_id "ENSMUSG00000100716.6"; transcript_id "ENSMUST00000190596.6"; gene_type "lincRNA"; gene_name "Gm28550"; transcript_type "lincRNA"; transcript_name "Gm28550-202"; exon_number 1; exon_id "ENSMUSE00001333760.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048109.1"; havana_transcript "OTTMUST00000123593.1";
mm10-chrY	HAVANA	exon	46911536	46911717	.	-	.	gene_id "ENSMUSG00000100716.6"; transcript_id "ENSMUST00000190596.6"; gene_type "lincRNA"; gene_name "Gm28550"; transcript_type "lincRNA"; transcript_name "Gm28550-202"; exon_number 2; exon_id "ENSMUSE00001327488.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048109.1"; havana_transcript "OTTMUST00000123593.1";
mm10-chrY	HAVANA	exon	46910030	46910094	.	-	.	gene_id "ENSMUSG00000100716.6"; transcript_id "ENSMUST00000190596.6"; gene_type "lincRNA"; gene_name "Gm28550"; transcript_type "lincRNA"; transcript_name "Gm28550-202"; exon_number 3; exon_id "ENSMUSE00001325404.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048109.1"; havana_transcript "OTTMUST00000123593.1";
mm10-chrY	HAVANA	transcript	46910030	46912390	.	-	.	gene_id "ENSMUSG00000100716.6"; transcript_id "ENSMUST00000189125.1"; gene_type "lincRNA"; gene_name "Gm28550"; transcript_type "lincRNA"; transcript_name "Gm28550-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048109.1"; havana_transcript "OTTMUST00000123594.1";
mm10-chrY	HAVANA	exon	46912205	46912390	.	-	.	gene_id "ENSMUSG00000100716.6"; transcript_id "ENSMUST00000189125.1"; gene_type "lincRNA"; gene_name "Gm28550"; transcript_type "lincRNA"; transcript_name "Gm28550-201"; exon_number 1; exon_id "ENSMUSE00001333760.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048109.1"; havana_transcript "OTTMUST00000123594.1";
mm10-chrY	HAVANA	exon	46911536	46911717	.	-	.	gene_id "ENSMUSG00000100716.6"; transcript_id "ENSMUST00000189125.1"; gene_type "lincRNA"; gene_name "Gm28550"; transcript_type "lincRNA"; transcript_name "Gm28550-201"; exon_number 2; exon_id "ENSMUSE00001327488.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048109.1"; havana_transcript "OTTMUST00000123594.1";
mm10-chrY	HAVANA	exon	46910623	46910807	.	-	.	gene_id "ENSMUSG00000100716.6"; transcript_id "ENSMUST00000189125.1"; gene_type "lincRNA"; gene_name "Gm28550"; transcript_type "lincRNA"; transcript_name "Gm28550-201"; exon_number 3; exon_id "ENSMUSE00001323579.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048109.1"; havana_transcript "OTTMUST00000123594.1";
mm10-chrY	HAVANA	exon	46910030	46910094	.	-	.	gene_id "ENSMUSG00000100716.6"; transcript_id "ENSMUST00000189125.1"; gene_type "lincRNA"; gene_name "Gm28550"; transcript_type "lincRNA"; transcript_name "Gm28550-201"; exon_number 4; exon_id "ENSMUSE00001325404.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048109.1"; havana_transcript "OTTMUST00000123594.1";
mm10-chrY	HAVANA	gene	46934838	46935365	.	-	.	gene_id "ENSMUSG00000100325.1"; gene_type "lincRNA"; gene_name "Gm28604"; level 2; havana_gene "OTTMUSG00000048110.1";
mm10-chrY	HAVANA	transcript	46934838	46935365	.	-	.	gene_id "ENSMUSG00000100325.1"; transcript_id "ENSMUST00000188638.1"; gene_type "lincRNA"; gene_name "Gm28604"; transcript_type "lincRNA"; transcript_name "Gm28604-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048110.1"; havana_transcript "OTTMUST00000123595.1";
mm10-chrY	HAVANA	exon	46935261	46935365	.	-	.	gene_id "ENSMUSG00000100325.1"; transcript_id "ENSMUST00000188638.1"; gene_type "lincRNA"; gene_name "Gm28604"; transcript_type "lincRNA"; transcript_name "Gm28604-202"; exon_number 1; exon_id "ENSMUSE00001334908.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048110.1"; havana_transcript "OTTMUST00000123595.1";
mm10-chrY	HAVANA	exon	46934838	46934906	.	-	.	gene_id "ENSMUSG00000100325.1"; transcript_id "ENSMUST00000188638.1"; gene_type "lincRNA"; gene_name "Gm28604"; transcript_type "lincRNA"; transcript_name "Gm28604-202"; exon_number 2; exon_id "ENSMUSE00001319096.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048110.1"; havana_transcript "OTTMUST00000123595.1";
mm10-chrY	HAVANA	transcript	46934882	46935365	.	-	.	gene_id "ENSMUSG00000100325.1"; transcript_id "ENSMUST00000186629.1"; gene_type "lincRNA"; gene_name "Gm28604"; transcript_type "lincRNA"; transcript_name "Gm28604-201"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048110.1"; havana_transcript "OTTMUST00000123596.1";
mm10-chrY	HAVANA	exon	46934882	46935365	.	-	.	gene_id "ENSMUSG00000100325.1"; transcript_id "ENSMUST00000186629.1"; gene_type "lincRNA"; gene_name "Gm28604"; transcript_type "lincRNA"; transcript_name "Gm28604-201"; exon_number 1; exon_id "ENSMUSE00001329209.1"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048110.1"; havana_transcript "OTTMUST00000123596.1";
mm10-chrY	HAVANA	gene	46970283	46970978	.	+	.	gene_id "ENSMUSG00000100048.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28603"; level 2; havana_gene "OTTMUSG00000048111.1";
mm10-chrY	HAVANA	transcript	46970283	46970978	.	+	.	gene_id "ENSMUSG00000100048.1"; transcript_id "ENSMUST00000187297.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28603"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28603-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048111.1"; havana_transcript "OTTMUST00000123597.1";
mm10-chrY	HAVANA	exon	46970283	46970978	.	+	.	gene_id "ENSMUSG00000100048.1"; transcript_id "ENSMUST00000187297.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28603"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28603-201"; exon_number 1; exon_id "ENSMUSE00001330951.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048111.1"; havana_transcript "OTTMUST00000123597.1";
mm10-chrY	HAVANA	gene	47252167	47254445	.	+	.	gene_id "ENSMUSG00000099789.6"; gene_type "lincRNA"; gene_name "Gm28565"; level 2; havana_gene "OTTMUSG00000048126.1";
mm10-chrY	HAVANA	transcript	47252167	47254445	.	+	.	gene_id "ENSMUSG00000099789.6"; transcript_id "ENSMUST00000186615.6"; gene_type "lincRNA"; gene_name "Gm28565"; transcript_type "lincRNA"; transcript_name "Gm28565-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048126.1"; havana_transcript "OTTMUST00000123615.1";
mm10-chrY	HAVANA	exon	47252167	47252267	.	+	.	gene_id "ENSMUSG00000099789.6"; transcript_id "ENSMUST00000186615.6"; gene_type "lincRNA"; gene_name "Gm28565"; transcript_type "lincRNA"; transcript_name "Gm28565-202"; exon_number 1; exon_id "ENSMUSE00001328471.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048126.1"; havana_transcript "OTTMUST00000123615.1";
mm10-chrY	HAVANA	exon	47252755	47252936	.	+	.	gene_id "ENSMUSG00000099789.6"; transcript_id "ENSMUST00000186615.6"; gene_type "lincRNA"; gene_name "Gm28565"; transcript_type "lincRNA"; transcript_name "Gm28565-202"; exon_number 2; exon_id "ENSMUSE00001327095.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048126.1"; havana_transcript "OTTMUST00000123615.1";
mm10-chrY	HAVANA	exon	47253665	47253849	.	+	.	gene_id "ENSMUSG00000099789.6"; transcript_id "ENSMUST00000186615.6"; gene_type "lincRNA"; gene_name "Gm28565"; transcript_type "lincRNA"; transcript_name "Gm28565-202"; exon_number 3; exon_id "ENSMUSE00001330807.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048126.1"; havana_transcript "OTTMUST00000123615.1";
mm10-chrY	HAVANA	exon	47254377	47254445	.	+	.	gene_id "ENSMUSG00000099789.6"; transcript_id "ENSMUST00000186615.6"; gene_type "lincRNA"; gene_name "Gm28565"; transcript_type "lincRNA"; transcript_name "Gm28565-202"; exon_number 4; exon_id "ENSMUSE00001318671.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048126.1"; havana_transcript "OTTMUST00000123615.1";
mm10-chrY	HAVANA	transcript	47252167	47254445	.	+	.	gene_id "ENSMUSG00000099789.6"; transcript_id "ENSMUST00000185875.1"; gene_type "lincRNA"; gene_name "Gm28565"; transcript_type "lincRNA"; transcript_name "Gm28565-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048126.1"; havana_transcript "OTTMUST00000123616.1";
mm10-chrY	HAVANA	exon	47252167	47252267	.	+	.	gene_id "ENSMUSG00000099789.6"; transcript_id "ENSMUST00000185875.1"; gene_type "lincRNA"; gene_name "Gm28565"; transcript_type "lincRNA"; transcript_name "Gm28565-201"; exon_number 1; exon_id "ENSMUSE00001328471.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048126.1"; havana_transcript "OTTMUST00000123616.1";
mm10-chrY	HAVANA	exon	47252755	47252936	.	+	.	gene_id "ENSMUSG00000099789.6"; transcript_id "ENSMUST00000185875.1"; gene_type "lincRNA"; gene_name "Gm28565"; transcript_type "lincRNA"; transcript_name "Gm28565-201"; exon_number 2; exon_id "ENSMUSE00001327095.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048126.1"; havana_transcript "OTTMUST00000123616.1";
mm10-chrY	HAVANA	exon	47254377	47254445	.	+	.	gene_id "ENSMUSG00000099789.6"; transcript_id "ENSMUST00000185875.1"; gene_type "lincRNA"; gene_name "Gm28565"; transcript_type "lincRNA"; transcript_name "Gm28565-201"; exon_number 3; exon_id "ENSMUSE00001318671.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048126.1"; havana_transcript "OTTMUST00000123616.1";
mm10-chrY	HAVANA	gene	47291729	47292256	.	+	.	gene_id "ENSMUSG00000099593.1"; gene_type "lincRNA"; gene_name "Gm28566"; level 2; havana_gene "OTTMUSG00000048127.1";
mm10-chrY	HAVANA	transcript	47291729	47292212	.	+	.	gene_id "ENSMUSG00000099593.1"; transcript_id "ENSMUST00000186714.1"; gene_type "lincRNA"; gene_name "Gm28566"; transcript_type "lincRNA"; transcript_name "Gm28566-201"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048127.1"; havana_transcript "OTTMUST00000123617.1";
mm10-chrY	HAVANA	exon	47291729	47292212	.	+	.	gene_id "ENSMUSG00000099593.1"; transcript_id "ENSMUST00000186714.1"; gene_type "lincRNA"; gene_name "Gm28566"; transcript_type "lincRNA"; transcript_name "Gm28566-201"; exon_number 1; exon_id "ENSMUSE00001323369.1"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048127.1"; havana_transcript "OTTMUST00000123617.1";
mm10-chrY	HAVANA	transcript	47291729	47292256	.	+	.	gene_id "ENSMUSG00000099593.1"; transcript_id "ENSMUST00000189532.1"; gene_type "lincRNA"; gene_name "Gm28566"; transcript_type "lincRNA"; transcript_name "Gm28566-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048127.1"; havana_transcript "OTTMUST00000123618.1";
mm10-chrY	HAVANA	exon	47291729	47291833	.	+	.	gene_id "ENSMUSG00000099593.1"; transcript_id "ENSMUST00000189532.1"; gene_type "lincRNA"; gene_name "Gm28566"; transcript_type "lincRNA"; transcript_name "Gm28566-202"; exon_number 1; exon_id "ENSMUSE00001332655.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048127.1"; havana_transcript "OTTMUST00000123618.1";
mm10-chrY	HAVANA	exon	47292188	47292256	.	+	.	gene_id "ENSMUSG00000099593.1"; transcript_id "ENSMUST00000189532.1"; gene_type "lincRNA"; gene_name "Gm28566"; transcript_type "lincRNA"; transcript_name "Gm28566-202"; exon_number 2; exon_id "ENSMUSE00001331854.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048127.1"; havana_transcript "OTTMUST00000123618.1";
mm10-chrY	HAVANA	gene	47314562	47316926	.	+	.	gene_id "ENSMUSG00000101109.6"; gene_type "lincRNA"; gene_name "Gm28697"; level 2; havana_gene "OTTMUSG00000048128.1";
mm10-chrY	HAVANA	transcript	47314562	47316926	.	+	.	gene_id "ENSMUSG00000101109.6"; transcript_id "ENSMUST00000188821.6"; gene_type "lincRNA"; gene_name "Gm28697"; transcript_type "lincRNA"; transcript_name "Gm28697-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048128.1"; havana_transcript "OTTMUST00000123619.1";
mm10-chrY	HAVANA	exon	47314562	47314747	.	+	.	gene_id "ENSMUSG00000101109.6"; transcript_id "ENSMUST00000188821.6"; gene_type "lincRNA"; gene_name "Gm28697"; transcript_type "lincRNA"; transcript_name "Gm28697-202"; exon_number 1; exon_id "ENSMUSE00001331167.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048128.1"; havana_transcript "OTTMUST00000123619.1";
mm10-chrY	HAVANA	exon	47315235	47315416	.	+	.	gene_id "ENSMUSG00000101109.6"; transcript_id "ENSMUST00000188821.6"; gene_type "lincRNA"; gene_name "Gm28697"; transcript_type "lincRNA"; transcript_name "Gm28697-202"; exon_number 2; exon_id "ENSMUSE00001329688.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048128.1"; havana_transcript "OTTMUST00000123619.1";
mm10-chrY	HAVANA	exon	47316145	47316329	.	+	.	gene_id "ENSMUSG00000101109.6"; transcript_id "ENSMUST00000188821.6"; gene_type "lincRNA"; gene_name "Gm28697"; transcript_type "lincRNA"; transcript_name "Gm28697-202"; exon_number 3; exon_id "ENSMUSE00001334114.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048128.1"; havana_transcript "OTTMUST00000123619.1";
mm10-chrY	HAVANA	exon	47316858	47316926	.	+	.	gene_id "ENSMUSG00000101109.6"; transcript_id "ENSMUST00000188821.6"; gene_type "lincRNA"; gene_name "Gm28697"; transcript_type "lincRNA"; transcript_name "Gm28697-202"; exon_number 4; exon_id "ENSMUSE00001320433.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048128.1"; havana_transcript "OTTMUST00000123619.1";
mm10-chrY	HAVANA	transcript	47314562	47316926	.	+	.	gene_id "ENSMUSG00000101109.6"; transcript_id "ENSMUST00000187693.1"; gene_type "lincRNA"; gene_name "Gm28697"; transcript_type "lincRNA"; transcript_name "Gm28697-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048128.1"; havana_transcript "OTTMUST00000123620.1";
mm10-chrY	HAVANA	exon	47314562	47314747	.	+	.	gene_id "ENSMUSG00000101109.6"; transcript_id "ENSMUST00000187693.1"; gene_type "lincRNA"; gene_name "Gm28697"; transcript_type "lincRNA"; transcript_name "Gm28697-201"; exon_number 1; exon_id "ENSMUSE00001331167.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048128.1"; havana_transcript "OTTMUST00000123620.1";
mm10-chrY	HAVANA	exon	47315235	47315416	.	+	.	gene_id "ENSMUSG00000101109.6"; transcript_id "ENSMUST00000187693.1"; gene_type "lincRNA"; gene_name "Gm28697"; transcript_type "lincRNA"; transcript_name "Gm28697-201"; exon_number 2; exon_id "ENSMUSE00001329688.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048128.1"; havana_transcript "OTTMUST00000123620.1";
mm10-chrY	HAVANA	exon	47316858	47316926	.	+	.	gene_id "ENSMUSG00000101109.6"; transcript_id "ENSMUST00000187693.1"; gene_type "lincRNA"; gene_name "Gm28697"; transcript_type "lincRNA"; transcript_name "Gm28697-201"; exon_number 3; exon_id "ENSMUSE00001320433.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048128.1"; havana_transcript "OTTMUST00000123620.1";
mm10-chrY	HAVANA	gene	47357940	47358467	.	+	.	gene_id "ENSMUSG00000101541.1"; gene_type "lincRNA"; gene_name "Gm28554"; level 2; havana_gene "OTTMUSG00000048129.1";
mm10-chrY	HAVANA	transcript	47357940	47358423	.	+	.	gene_id "ENSMUSG00000101541.1"; transcript_id "ENSMUST00000189175.1"; gene_type "lincRNA"; gene_name "Gm28554"; transcript_type "lincRNA"; transcript_name "Gm28554-202"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048129.1"; havana_transcript "OTTMUST00000123621.1";
mm10-chrY	HAVANA	exon	47357940	47358423	.	+	.	gene_id "ENSMUSG00000101541.1"; transcript_id "ENSMUST00000189175.1"; gene_type "lincRNA"; gene_name "Gm28554"; transcript_type "lincRNA"; transcript_name "Gm28554-202"; exon_number 1; exon_id "ENSMUSE00001331109.1"; level 2; transcript_support_level "NA"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048129.1"; havana_transcript "OTTMUST00000123621.1";
mm10-chrY	HAVANA	transcript	47357940	47358467	.	+	.	gene_id "ENSMUSG00000101541.1"; transcript_id "ENSMUST00000187964.1"; gene_type "lincRNA"; gene_name "Gm28554"; transcript_type "lincRNA"; transcript_name "Gm28554-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048129.1"; havana_transcript "OTTMUST00000123622.1";
mm10-chrY	HAVANA	exon	47357940	47358044	.	+	.	gene_id "ENSMUSG00000101541.1"; transcript_id "ENSMUST00000187964.1"; gene_type "lincRNA"; gene_name "Gm28554"; transcript_type "lincRNA"; transcript_name "Gm28554-201"; exon_number 1; exon_id "ENSMUSE00001330818.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048129.1"; havana_transcript "OTTMUST00000123622.1";
mm10-chrY	HAVANA	exon	47358399	47358467	.	+	.	gene_id "ENSMUSG00000101541.1"; transcript_id "ENSMUST00000187964.1"; gene_type "lincRNA"; gene_name "Gm28554"; transcript_type "lincRNA"; transcript_name "Gm28554-201"; exon_number 2; exon_id "ENSMUSE00001329536.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048129.1"; havana_transcript "OTTMUST00000123622.1";
mm10-chrY	HAVANA	gene	47450960	47482990	.	+	.	gene_id "ENSMUSG00000094782.7"; gene_type "protein_coding"; gene_name "Gm21256"; level 2; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	HAVANA	transcript	47450960	47482990	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	exon	47450960	47451003	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 1; exon_id "ENSMUSE00001328745.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	exon	47452371	47452502	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 2; exon_id "ENSMUSE00001325361.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	CDS	47452385	47452502	.	+	0	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 2; exon_id "ENSMUSE00001325361.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	start_codon	47452385	47452387	.	+	0	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 2; exon_id "ENSMUSE00001325361.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	exon	47463825	47463891	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 3; exon_id "ENSMUSE00001018937.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	CDS	47463825	47463891	.	+	2	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 3; exon_id "ENSMUSE00001018937.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	exon	47464442	47464476	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 4; exon_id "ENSMUSE00001061628.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	CDS	47464442	47464476	.	+	1	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 4; exon_id "ENSMUSE00001061628.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	exon	47471511	47471577	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 5; exon_id "ENSMUSE00001001442.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	CDS	47471511	47471577	.	+	2	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 5; exon_id "ENSMUSE00001001442.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	exon	47472139	47472173	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 6; exon_id "ENSMUSE00001085114.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	CDS	47472139	47472173	.	+	1	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 6; exon_id "ENSMUSE00001085114.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	exon	47479317	47479434	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 7; exon_id "ENSMUSE00001034021.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	CDS	47479317	47479434	.	+	2	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 7; exon_id "ENSMUSE00001034021.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	exon	47480186	47480285	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 8; exon_id "ENSMUSE00001324923.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	CDS	47480186	47480285	.	+	1	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 8; exon_id "ENSMUSE00001324923.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	exon	47482299	47482397	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 9; exon_id "ENSMUSE00001323683.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	CDS	47482299	47482397	.	+	0	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 9; exon_id "ENSMUSE00001323683.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	exon	47482756	47482990	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 10; exon_id "ENSMUSE00001330096.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	CDS	47482756	47482782	.	+	0	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 10; exon_id "ENSMUSE00001330096.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	stop_codon	47482783	47482785	.	+	0	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 10; exon_id "ENSMUSE00001330096.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	UTR	47450960	47451003	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 1; exon_id "ENSMUSE00001328745.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	UTR	47452371	47452384	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 2; exon_id "ENSMUSE00001325361.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	HAVANA	UTR	47482783	47482990	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000188881.6"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-202"; exon_number 10; exon_id "ENSMUSE00001330096.1"; level 2; protein_id "ENSMUSP00000140938.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048130.1"; havana_transcript "OTTMUST00000123623.1";
mm10-chrY	ENSEMBL	transcript	47452394	47480252	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	exon	47452394	47452502	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 1; exon_id "ENSMUSE00001009079.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	CDS	47452394	47452502	.	+	0	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 1; exon_id "ENSMUSE00001009079.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	start_codon	47452394	47452396	.	+	0	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 1; exon_id "ENSMUSE00001009079.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	exon	47463825	47463891	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 2; exon_id "ENSMUSE00001018937.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	CDS	47463825	47463891	.	+	2	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 2; exon_id "ENSMUSE00001018937.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	exon	47464442	47464476	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 3; exon_id "ENSMUSE00001061628.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	CDS	47464442	47464476	.	+	1	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 3; exon_id "ENSMUSE00001061628.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	exon	47471511	47471577	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 4; exon_id "ENSMUSE00001001442.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	CDS	47471511	47471577	.	+	2	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 4; exon_id "ENSMUSE00001001442.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	exon	47472139	47472173	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 5; exon_id "ENSMUSE00001085114.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	CDS	47472139	47472173	.	+	1	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 5; exon_id "ENSMUSE00001085114.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	exon	47479317	47479434	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 6; exon_id "ENSMUSE00001034021.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	CDS	47479317	47479434	.	+	2	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 6; exon_id "ENSMUSE00001034021.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	exon	47480186	47480252	.	+	.	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 7; exon_id "ENSMUSE00001029124.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	ENSEMBL	CDS	47480186	47480252	.	+	1	gene_id "ENSMUSG00000094782.7"; transcript_id "ENSMUST00000179672.1"; gene_type "protein_coding"; gene_name "Gm21256"; transcript_type "protein_coding"; transcript_name "Gm21256-201"; exon_number 7; exon_id "ENSMUSE00001029124.1"; level 3; protein_id "ENSMUSP00000135931.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048130.1";
mm10-chrY	HAVANA	gene	47544772	47548004	.	+	.	gene_id "ENSMUSG00000100852.1"; gene_type "lincRNA"; gene_name "Gm29056"; level 2; havana_gene "OTTMUSG00000048131.1";
mm10-chrY	HAVANA	transcript	47544772	47548004	.	+	.	gene_id "ENSMUSG00000100852.1"; transcript_id "ENSMUST00000187933.1"; gene_type "lincRNA"; gene_name "Gm29056"; transcript_type "lincRNA"; transcript_name "Gm29056-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048131.1"; havana_transcript "OTTMUST00000123624.1";
mm10-chrY	HAVANA	exon	47544772	47545410	.	+	.	gene_id "ENSMUSG00000100852.1"; transcript_id "ENSMUST00000187933.1"; gene_type "lincRNA"; gene_name "Gm29056"; transcript_type "lincRNA"; transcript_name "Gm29056-201"; exon_number 1; exon_id "ENSMUSE00001331418.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048131.1"; havana_transcript "OTTMUST00000123624.1";
mm10-chrY	HAVANA	exon	47545895	47546077	.	+	.	gene_id "ENSMUSG00000100852.1"; transcript_id "ENSMUST00000187933.1"; gene_type "lincRNA"; gene_name "Gm29056"; transcript_type "lincRNA"; transcript_name "Gm29056-201"; exon_number 2; exon_id "ENSMUSE00001320389.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048131.1"; havana_transcript "OTTMUST00000123624.1";
mm10-chrY	HAVANA	exon	47546807	47546987	.	+	.	gene_id "ENSMUSG00000100852.1"; transcript_id "ENSMUST00000187933.1"; gene_type "lincRNA"; gene_name "Gm29056"; transcript_type "lincRNA"; transcript_name "Gm29056-201"; exon_number 3; exon_id "ENSMUSE00001330127.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048131.1"; havana_transcript "OTTMUST00000123624.1";
mm10-chrY	HAVANA	exon	47547515	47548004	.	+	.	gene_id "ENSMUSG00000100852.1"; transcript_id "ENSMUST00000187933.1"; gene_type "lincRNA"; gene_name "Gm29056"; transcript_type "lincRNA"; transcript_name "Gm29056-201"; exon_number 4; exon_id "ENSMUSE00001323295.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048131.1"; havana_transcript "OTTMUST00000123624.1";
mm10-chrY	HAVANA	transcript	47545225	47547580	.	+	.	gene_id "ENSMUSG00000100852.1"; transcript_id "ENSMUST00000188889.1"; gene_type "lincRNA"; gene_name "Gm29056"; transcript_type "lincRNA"; transcript_name "Gm29056-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048131.1"; havana_transcript "OTTMUST00000123625.1";
mm10-chrY	HAVANA	exon	47545225	47545410	.	+	.	gene_id "ENSMUSG00000100852.1"; transcript_id "ENSMUST00000188889.1"; gene_type "lincRNA"; gene_name "Gm29056"; transcript_type "lincRNA"; transcript_name "Gm29056-202"; exon_number 1; exon_id "ENSMUSE00001324728.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048131.1"; havana_transcript "OTTMUST00000123625.1";
mm10-chrY	HAVANA	exon	47545899	47546077	.	+	.	gene_id "ENSMUSG00000100852.1"; transcript_id "ENSMUST00000188889.1"; gene_type "lincRNA"; gene_name "Gm29056"; transcript_type "lincRNA"; transcript_name "Gm29056-202"; exon_number 2; exon_id "ENSMUSE00001331723.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048131.1"; havana_transcript "OTTMUST00000123625.1";
mm10-chrY	HAVANA	exon	47547515	47547580	.	+	.	gene_id "ENSMUSG00000100852.1"; transcript_id "ENSMUST00000188889.1"; gene_type "lincRNA"; gene_name "Gm29056"; transcript_type "lincRNA"; transcript_name "Gm29056-202"; exon_number 3; exon_id "ENSMUSE00001331002.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048131.1"; havana_transcript "OTTMUST00000123625.1";
mm10-chrY	HAVANA	gene	47573714	47576949	.	+	.	gene_id "ENSMUSG00000099532.1"; gene_type "lincRNA"; gene_name "Gm29098"; level 2; havana_gene "OTTMUSG00000048132.1";
mm10-chrY	HAVANA	transcript	47573714	47576949	.	+	.	gene_id "ENSMUSG00000099532.1"; transcript_id "ENSMUST00000186104.1"; gene_type "lincRNA"; gene_name "Gm29098"; transcript_type "lincRNA"; transcript_name "Gm29098-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048132.1"; havana_transcript "OTTMUST00000123626.1";
mm10-chrY	HAVANA	exon	47573714	47574351	.	+	.	gene_id "ENSMUSG00000099532.1"; transcript_id "ENSMUST00000186104.1"; gene_type "lincRNA"; gene_name "Gm29098"; transcript_type "lincRNA"; transcript_name "Gm29098-201"; exon_number 1; exon_id "ENSMUSE00001326983.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048132.1"; havana_transcript "OTTMUST00000123626.1";
mm10-chrY	HAVANA	exon	47574835	47575020	.	+	.	gene_id "ENSMUSG00000099532.1"; transcript_id "ENSMUST00000186104.1"; gene_type "lincRNA"; gene_name "Gm29098"; transcript_type "lincRNA"; transcript_name "Gm29098-201"; exon_number 2; exon_id "ENSMUSE00001322704.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048132.1"; havana_transcript "OTTMUST00000123626.1";
mm10-chrY	HAVANA	exon	47575748	47575931	.	+	.	gene_id "ENSMUSG00000099532.1"; transcript_id "ENSMUST00000186104.1"; gene_type "lincRNA"; gene_name "Gm29098"; transcript_type "lincRNA"; transcript_name "Gm29098-201"; exon_number 3; exon_id "ENSMUSE00001319830.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048132.1"; havana_transcript "OTTMUST00000123626.1";
mm10-chrY	HAVANA	exon	47576460	47576949	.	+	.	gene_id "ENSMUSG00000099532.1"; transcript_id "ENSMUST00000186104.1"; gene_type "lincRNA"; gene_name "Gm29098"; transcript_type "lincRNA"; transcript_name "Gm29098-201"; exon_number 4; exon_id "ENSMUSE00001331196.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048132.1"; havana_transcript "OTTMUST00000123626.1";
mm10-chrY	HAVANA	transcript	47574166	47576528	.	+	.	gene_id "ENSMUSG00000099532.1"; transcript_id "ENSMUST00000191313.1"; gene_type "lincRNA"; gene_name "Gm29098"; transcript_type "lincRNA"; transcript_name "Gm29098-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048132.1"; havana_transcript "OTTMUST00000123627.1";
mm10-chrY	HAVANA	exon	47574166	47574351	.	+	.	gene_id "ENSMUSG00000099532.1"; transcript_id "ENSMUST00000191313.1"; gene_type "lincRNA"; gene_name "Gm29098"; transcript_type "lincRNA"; transcript_name "Gm29098-202"; exon_number 1; exon_id "ENSMUSE00001323409.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048132.1"; havana_transcript "OTTMUST00000123627.1";
mm10-chrY	HAVANA	exon	47574839	47575020	.	+	.	gene_id "ENSMUSG00000099532.1"; transcript_id "ENSMUST00000191313.1"; gene_type "lincRNA"; gene_name "Gm29098"; transcript_type "lincRNA"; transcript_name "Gm29098-202"; exon_number 2; exon_id "ENSMUSE00001322567.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048132.1"; havana_transcript "OTTMUST00000123627.1";
mm10-chrY	HAVANA	exon	47576460	47576528	.	+	.	gene_id "ENSMUSG00000099532.1"; transcript_id "ENSMUST00000191313.1"; gene_type "lincRNA"; gene_name "Gm29098"; transcript_type "lincRNA"; transcript_name "Gm29098-202"; exon_number 3; exon_id "ENSMUSE00001333635.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048132.1"; havana_transcript "OTTMUST00000123627.1";
mm10-chrY	ENSEMBL	gene	47669242	47691098	.	-	.	gene_id "ENSMUSG00000094170.1"; gene_type "protein_coding"; gene_name "Gm21170"; level 3;
mm10-chrY	ENSEMBL	transcript	47669242	47691098	.	-	.	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	47690990	47691098	.	-	.	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 1; exon_id "ENSMUSE00001010617.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	47690990	47691098	.	-	0	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 1; exon_id "ENSMUSE00001010617.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	47691096	47691098	.	-	0	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 1; exon_id "ENSMUSE00001010617.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	47685615	47685681	.	-	.	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 2; exon_id "ENSMUSE00000971655.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	47685615	47685681	.	-	2	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 2; exon_id "ENSMUSE00000971655.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	47684999	47685033	.	-	.	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 3; exon_id "ENSMUSE00000974115.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	47684999	47685033	.	-	1	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 3; exon_id "ENSMUSE00000974115.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	47677919	47677985	.	-	.	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 4; exon_id "ENSMUSE00001015755.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	47677919	47677985	.	-	2	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 4; exon_id "ENSMUSE00001015755.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	47677324	47677358	.	-	.	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 5; exon_id "ENSMUSE00001059510.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	47677324	47677358	.	-	1	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 5; exon_id "ENSMUSE00001059510.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	47670054	47670171	.	-	.	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 6; exon_id "ENSMUSE00001029451.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	47670054	47670171	.	-	2	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 6; exon_id "ENSMUSE00001029451.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	47669242	47669308	.	-	.	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 7; exon_id "ENSMUSE00000983730.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	47669242	47669308	.	-	1	gene_id "ENSMUSG00000094170.1"; transcript_id "ENSMUST00000179330.1"; gene_type "protein_coding"; gene_name "Gm21170"; transcript_type "protein_coding"; transcript_name "Gm21170-201"; exon_number 7; exon_id "ENSMUSE00000983730.1"; level 3; protein_id "ENSMUSP00000136783.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	47831932	47835165	.	-	.	gene_id "ENSMUSG00000102054.6"; gene_type "lincRNA"; gene_name "Gm29373"; level 2; havana_gene "OTTMUSG00000048157.1";
mm10-chrY	HAVANA	transcript	47831932	47835165	.	-	.	gene_id "ENSMUSG00000102054.6"; transcript_id "ENSMUST00000190660.6"; gene_type "lincRNA"; gene_name "Gm29373"; transcript_type "lincRNA"; transcript_name "Gm29373-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048157.1"; havana_transcript "OTTMUST00000123672.1";
mm10-chrY	HAVANA	exon	47834527	47835165	.	-	.	gene_id "ENSMUSG00000102054.6"; transcript_id "ENSMUST00000190660.6"; gene_type "lincRNA"; gene_name "Gm29373"; transcript_type "lincRNA"; transcript_name "Gm29373-201"; exon_number 1; exon_id "ENSMUSE00001319173.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048157.1"; havana_transcript "OTTMUST00000123672.1";
mm10-chrY	HAVANA	exon	47833858	47834039	.	-	.	gene_id "ENSMUSG00000102054.6"; transcript_id "ENSMUST00000190660.6"; gene_type "lincRNA"; gene_name "Gm29373"; transcript_type "lincRNA"; transcript_name "Gm29373-201"; exon_number 2; exon_id "ENSMUSE00001322463.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048157.1"; havana_transcript "OTTMUST00000123672.1";
mm10-chrY	HAVANA	exon	47832945	47833129	.	-	.	gene_id "ENSMUSG00000102054.6"; transcript_id "ENSMUST00000190660.6"; gene_type "lincRNA"; gene_name "Gm29373"; transcript_type "lincRNA"; transcript_name "Gm29373-201"; exon_number 3; exon_id "ENSMUSE00001327569.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048157.1"; havana_transcript "OTTMUST00000123672.1";
mm10-chrY	HAVANA	exon	47831932	47832419	.	-	.	gene_id "ENSMUSG00000102054.6"; transcript_id "ENSMUST00000190660.6"; gene_type "lincRNA"; gene_name "Gm29373"; transcript_type "lincRNA"; transcript_name "Gm29373-201"; exon_number 4; exon_id "ENSMUSE00001333456.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048157.1"; havana_transcript "OTTMUST00000123672.1";
mm10-chrY	HAVANA	transcript	47832351	47834712	.	-	.	gene_id "ENSMUSG00000102054.6"; transcript_id "ENSMUST00000191017.1"; gene_type "lincRNA"; gene_name "Gm29373"; transcript_type "lincRNA"; transcript_name "Gm29373-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048157.1"; havana_transcript "OTTMUST00000123673.1";
mm10-chrY	HAVANA	exon	47834527	47834712	.	-	.	gene_id "ENSMUSG00000102054.6"; transcript_id "ENSMUST00000191017.1"; gene_type "lincRNA"; gene_name "Gm29373"; transcript_type "lincRNA"; transcript_name "Gm29373-202"; exon_number 1; exon_id "ENSMUSE00001331246.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048157.1"; havana_transcript "OTTMUST00000123673.1";
mm10-chrY	HAVANA	exon	47833858	47834039	.	-	.	gene_id "ENSMUSG00000102054.6"; transcript_id "ENSMUST00000191017.1"; gene_type "lincRNA"; gene_name "Gm29373"; transcript_type "lincRNA"; transcript_name "Gm29373-202"; exon_number 2; exon_id "ENSMUSE00001322463.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048157.1"; havana_transcript "OTTMUST00000123673.1";
mm10-chrY	HAVANA	exon	47832351	47832419	.	-	.	gene_id "ENSMUSG00000102054.6"; transcript_id "ENSMUST00000191017.1"; gene_type "lincRNA"; gene_name "Gm29373"; transcript_type "lincRNA"; transcript_name "Gm29373-202"; exon_number 3; exon_id "ENSMUSE00001334821.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048157.1"; havana_transcript "OTTMUST00000123673.1";
mm10-chrY	HAVANA	gene	47856812	47857339	.	-	.	gene_id "ENSMUSG00000101131.1"; gene_type "lincRNA"; gene_name "Gm29370"; level 2; havana_gene "OTTMUSG00000048158.1";
mm10-chrY	HAVANA	transcript	47856812	47857339	.	-	.	gene_id "ENSMUSG00000101131.1"; transcript_id "ENSMUST00000186581.1"; gene_type "lincRNA"; gene_name "Gm29370"; transcript_type "lincRNA"; transcript_name "Gm29370-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048158.1"; havana_transcript "OTTMUST00000123674.1";
mm10-chrY	HAVANA	exon	47857235	47857339	.	-	.	gene_id "ENSMUSG00000101131.1"; transcript_id "ENSMUST00000186581.1"; gene_type "lincRNA"; gene_name "Gm29370"; transcript_type "lincRNA"; transcript_name "Gm29370-201"; exon_number 1; exon_id "ENSMUSE00001327077.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048158.1"; havana_transcript "OTTMUST00000123674.1";
mm10-chrY	HAVANA	exon	47856812	47856880	.	-	.	gene_id "ENSMUSG00000101131.1"; transcript_id "ENSMUST00000186581.1"; gene_type "lincRNA"; gene_name "Gm29370"; transcript_type "lincRNA"; transcript_name "Gm29370-201"; exon_number 2; exon_id "ENSMUSE00001323835.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048158.1"; havana_transcript "OTTMUST00000123674.1";
mm10-chrY	HAVANA	transcript	47856835	47857333	.	-	.	gene_id "ENSMUSG00000101131.1"; transcript_id "ENSMUST00000187476.1"; gene_type "lincRNA"; gene_name "Gm29370"; transcript_type "lincRNA"; transcript_name "Gm29370-202"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000048158.1"; havana_transcript "OTTMUST00000123675.1";
mm10-chrY	HAVANA	exon	47856835	47857333	.	-	.	gene_id "ENSMUSG00000101131.1"; transcript_id "ENSMUST00000187476.1"; gene_type "lincRNA"; gene_name "Gm29370"; transcript_type "lincRNA"; transcript_name "Gm29370-202"; exon_number 1; exon_id "ENSMUSE00001327167.1"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000048158.1"; havana_transcript "OTTMUST00000123675.1";
mm10-chrY	HAVANA	gene	47892227	47892922	.	+	.	gene_id "ENSMUSG00000099339.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21751"; level 2; havana_gene "OTTMUSG00000048182.1";
mm10-chrY	HAVANA	transcript	47892227	47892922	.	+	.	gene_id "ENSMUSG00000099339.1"; transcript_id "ENSMUST00000188043.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21751"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21751-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048182.1"; havana_transcript "OTTMUST00000123716.1";
mm10-chrY	HAVANA	exon	47892227	47892922	.	+	.	gene_id "ENSMUSG00000099339.1"; transcript_id "ENSMUST00000188043.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21751"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21751-201"; exon_number 1; exon_id "ENSMUSE00001320580.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048182.1"; havana_transcript "OTTMUST00000123716.1";
mm10-chrY	HAVANA	gene	48185737	48188014	.	+	.	gene_id "ENSMUSG00000099674.6"; gene_type "lincRNA"; gene_name "Gm29166"; level 2; havana_gene "OTTMUSG00000048183.1";
mm10-chrY	HAVANA	transcript	48185737	48188014	.	+	.	gene_id "ENSMUSG00000099674.6"; transcript_id "ENSMUST00000186716.6"; gene_type "lincRNA"; gene_name "Gm29166"; transcript_type "lincRNA"; transcript_name "Gm29166-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048183.1"; havana_transcript "OTTMUST00000123717.1";
mm10-chrY	HAVANA	exon	48185737	48185837	.	+	.	gene_id "ENSMUSG00000099674.6"; transcript_id "ENSMUST00000186716.6"; gene_type "lincRNA"; gene_name "Gm29166"; transcript_type "lincRNA"; transcript_name "Gm29166-201"; exon_number 1; exon_id "ENSMUSE00001320242.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048183.1"; havana_transcript "OTTMUST00000123717.1";
mm10-chrY	HAVANA	exon	48186325	48186506	.	+	.	gene_id "ENSMUSG00000099674.6"; transcript_id "ENSMUST00000186716.6"; gene_type "lincRNA"; gene_name "Gm29166"; transcript_type "lincRNA"; transcript_name "Gm29166-201"; exon_number 2; exon_id "ENSMUSE00001331286.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048183.1"; havana_transcript "OTTMUST00000123717.1";
mm10-chrY	HAVANA	exon	48187946	48188014	.	+	.	gene_id "ENSMUSG00000099674.6"; transcript_id "ENSMUST00000186716.6"; gene_type "lincRNA"; gene_name "Gm29166"; transcript_type "lincRNA"; transcript_name "Gm29166-201"; exon_number 3; exon_id "ENSMUSE00001320145.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048183.1"; havana_transcript "OTTMUST00000123717.1";
mm10-chrY	HAVANA	transcript	48185737	48188014	.	+	.	gene_id "ENSMUSG00000099674.6"; transcript_id "ENSMUST00000189600.1"; gene_type "lincRNA"; gene_name "Gm29166"; transcript_type "lincRNA"; transcript_name "Gm29166-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048183.1"; havana_transcript "OTTMUST00000123718.1";
mm10-chrY	HAVANA	exon	48185737	48185837	.	+	.	gene_id "ENSMUSG00000099674.6"; transcript_id "ENSMUST00000189600.1"; gene_type "lincRNA"; gene_name "Gm29166"; transcript_type "lincRNA"; transcript_name "Gm29166-202"; exon_number 1; exon_id "ENSMUSE00001320242.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048183.1"; havana_transcript "OTTMUST00000123718.1";
mm10-chrY	HAVANA	exon	48186325	48186506	.	+	.	gene_id "ENSMUSG00000099674.6"; transcript_id "ENSMUST00000189600.1"; gene_type "lincRNA"; gene_name "Gm29166"; transcript_type "lincRNA"; transcript_name "Gm29166-202"; exon_number 2; exon_id "ENSMUSE00001331286.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048183.1"; havana_transcript "OTTMUST00000123718.1";
mm10-chrY	HAVANA	exon	48187234	48187418	.	+	.	gene_id "ENSMUSG00000099674.6"; transcript_id "ENSMUST00000189600.1"; gene_type "lincRNA"; gene_name "Gm29166"; transcript_type "lincRNA"; transcript_name "Gm29166-202"; exon_number 3; exon_id "ENSMUSE00001327693.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048183.1"; havana_transcript "OTTMUST00000123718.1";
mm10-chrY	HAVANA	exon	48187946	48188014	.	+	.	gene_id "ENSMUSG00000099674.6"; transcript_id "ENSMUST00000189600.1"; gene_type "lincRNA"; gene_name "Gm29166"; transcript_type "lincRNA"; transcript_name "Gm29166-202"; exon_number 4; exon_id "ENSMUSE00001320145.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048183.1"; havana_transcript "OTTMUST00000123718.1";
mm10-chrY	HAVANA	gene	48220016	48220543	.	+	.	gene_id "ENSMUSG00000101069.1"; gene_type "lincRNA"; gene_name "Gm28194"; level 2; havana_gene "OTTMUSG00000048184.1";
mm10-chrY	HAVANA	transcript	48220016	48220499	.	+	.	gene_id "ENSMUSG00000101069.1"; transcript_id "ENSMUST00000187412.1"; gene_type "lincRNA"; gene_name "Gm28194"; transcript_type "lincRNA"; transcript_name "Gm28194-201"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000048184.1"; havana_transcript "OTTMUST00000123719.1";
mm10-chrY	HAVANA	exon	48220016	48220499	.	+	.	gene_id "ENSMUSG00000101069.1"; transcript_id "ENSMUST00000187412.1"; gene_type "lincRNA"; gene_name "Gm28194"; transcript_type "lincRNA"; transcript_name "Gm28194-201"; exon_number 1; exon_id "ENSMUSE00001327564.1"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000048184.1"; havana_transcript "OTTMUST00000123719.1";
mm10-chrY	HAVANA	transcript	48220016	48220543	.	+	.	gene_id "ENSMUSG00000101069.1"; transcript_id "ENSMUST00000191217.1"; gene_type "lincRNA"; gene_name "Gm28194"; transcript_type "lincRNA"; transcript_name "Gm28194-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048184.1"; havana_transcript "OTTMUST00000123720.1";
mm10-chrY	HAVANA	exon	48220016	48220120	.	+	.	gene_id "ENSMUSG00000101069.1"; transcript_id "ENSMUST00000191217.1"; gene_type "lincRNA"; gene_name "Gm28194"; transcript_type "lincRNA"; transcript_name "Gm28194-202"; exon_number 1; exon_id "ENSMUSE00001328280.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048184.1"; havana_transcript "OTTMUST00000123720.1";
mm10-chrY	HAVANA	exon	48220475	48220543	.	+	.	gene_id "ENSMUSG00000101069.1"; transcript_id "ENSMUST00000191217.1"; gene_type "lincRNA"; gene_name "Gm28194"; transcript_type "lincRNA"; transcript_name "Gm28194-202"; exon_number 2; exon_id "ENSMUSE00001334581.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048184.1"; havana_transcript "OTTMUST00000123720.1";
mm10-chrY	HAVANA	gene	48311855	48343871	.	+	.	gene_id "ENSMUSG00000101653.1"; gene_type "protein_coding"; gene_name "Gm20792"; level 2; havana_gene "OTTMUSG00000048185.1";
mm10-chrY	HAVANA	transcript	48311855	48343871	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	exon	48311855	48311898	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 1; exon_id "ENSMUSE00001330301.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	exon	48313263	48313394	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 2; exon_id "ENSMUSE00001324257.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	CDS	48313277	48313394	.	+	0	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 2; exon_id "ENSMUSE00001324257.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	start_codon	48313277	48313279	.	+	0	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 2; exon_id "ENSMUSE00001324257.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	exon	48324723	48324789	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 3; exon_id "ENSMUSE00001330736.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	CDS	48324723	48324789	.	+	2	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 3; exon_id "ENSMUSE00001330736.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	exon	48325340	48325374	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 4; exon_id "ENSMUSE00001328399.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	CDS	48325340	48325374	.	+	1	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 4; exon_id "ENSMUSE00001328399.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	exon	48332405	48332471	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 5; exon_id "ENSMUSE00001323085.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	CDS	48332405	48332471	.	+	2	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 5; exon_id "ENSMUSE00001323085.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	exon	48333031	48333065	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 6; exon_id "ENSMUSE00001320786.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	CDS	48333031	48333065	.	+	1	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 6; exon_id "ENSMUSE00001320786.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	exon	48340199	48340316	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 7; exon_id "ENSMUSE00001327080.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	CDS	48340199	48340316	.	+	2	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 7; exon_id "ENSMUSE00001327080.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	exon	48341067	48341166	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 8; exon_id "ENSMUSE00001330733.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	CDS	48341067	48341166	.	+	1	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 8; exon_id "ENSMUSE00001330733.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	exon	48343181	48343279	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 9; exon_id "ENSMUSE00001319606.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	CDS	48343181	48343279	.	+	0	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 9; exon_id "ENSMUSE00001319606.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	exon	48343638	48343871	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 10; exon_id "ENSMUSE00001334813.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	CDS	48343638	48343664	.	+	0	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 10; exon_id "ENSMUSE00001334813.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	stop_codon	48343665	48343667	.	+	0	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 10; exon_id "ENSMUSE00001334813.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	UTR	48311855	48311898	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 1; exon_id "ENSMUSE00001330301.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	UTR	48313263	48313276	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 2; exon_id "ENSMUSE00001324257.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	UTR	48343665	48343871	.	+	.	gene_id "ENSMUSG00000101653.1"; transcript_id "ENSMUST00000189765.1"; gene_type "protein_coding"; gene_name "Gm20792"; transcript_type "protein_coding"; transcript_name "Gm20792-201"; exon_number 10; exon_id "ENSMUSE00001334813.1"; level 2; protein_id "ENSMUSP00000140983.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048185.1"; havana_transcript "OTTMUST00000123721.1";
mm10-chrY	HAVANA	gene	48405690	48408921	.	+	.	gene_id "ENSMUSG00000100423.1"; gene_type "lincRNA"; gene_name "Gm28754"; level 2; havana_gene "OTTMUSG00000048215.1";
mm10-chrY	HAVANA	transcript	48405690	48408921	.	+	.	gene_id "ENSMUSG00000100423.1"; transcript_id "ENSMUST00000188778.1"; gene_type "lincRNA"; gene_name "Gm28754"; transcript_type "lincRNA"; transcript_name "Gm28754-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048215.1"; havana_transcript "OTTMUST00000123781.1";
mm10-chrY	HAVANA	exon	48405690	48406328	.	+	.	gene_id "ENSMUSG00000100423.1"; transcript_id "ENSMUST00000188778.1"; gene_type "lincRNA"; gene_name "Gm28754"; transcript_type "lincRNA"; transcript_name "Gm28754-201"; exon_number 1; exon_id "ENSMUSE00001325557.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048215.1"; havana_transcript "OTTMUST00000123781.1";
mm10-chrY	HAVANA	exon	48406813	48406995	.	+	.	gene_id "ENSMUSG00000100423.1"; transcript_id "ENSMUST00000188778.1"; gene_type "lincRNA"; gene_name "Gm28754"; transcript_type "lincRNA"; transcript_name "Gm28754-201"; exon_number 2; exon_id "ENSMUSE00001318243.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048215.1"; havana_transcript "OTTMUST00000123781.1";
mm10-chrY	HAVANA	exon	48407724	48407904	.	+	.	gene_id "ENSMUSG00000100423.1"; transcript_id "ENSMUST00000188778.1"; gene_type "lincRNA"; gene_name "Gm28754"; transcript_type "lincRNA"; transcript_name "Gm28754-201"; exon_number 3; exon_id "ENSMUSE00001321051.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048215.1"; havana_transcript "OTTMUST00000123781.1";
mm10-chrY	HAVANA	exon	48408432	48408921	.	+	.	gene_id "ENSMUSG00000100423.1"; transcript_id "ENSMUST00000188778.1"; gene_type "lincRNA"; gene_name "Gm28754"; transcript_type "lincRNA"; transcript_name "Gm28754-201"; exon_number 4; exon_id "ENSMUSE00001328822.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048215.1"; havana_transcript "OTTMUST00000123781.1";
mm10-chrY	HAVANA	transcript	48406143	48408497	.	+	.	gene_id "ENSMUSG00000100423.1"; transcript_id "ENSMUST00000190629.1"; gene_type "lincRNA"; gene_name "Gm28754"; transcript_type "lincRNA"; transcript_name "Gm28754-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048215.1"; havana_transcript "OTTMUST00000123782.1";
mm10-chrY	HAVANA	exon	48406143	48406328	.	+	.	gene_id "ENSMUSG00000100423.1"; transcript_id "ENSMUST00000190629.1"; gene_type "lincRNA"; gene_name "Gm28754"; transcript_type "lincRNA"; transcript_name "Gm28754-202"; exon_number 1; exon_id "ENSMUSE00001325789.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048215.1"; havana_transcript "OTTMUST00000123782.1";
mm10-chrY	HAVANA	exon	48406817	48406995	.	+	.	gene_id "ENSMUSG00000100423.1"; transcript_id "ENSMUST00000190629.1"; gene_type "lincRNA"; gene_name "Gm28754"; transcript_type "lincRNA"; transcript_name "Gm28754-202"; exon_number 2; exon_id "ENSMUSE00001320007.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048215.1"; havana_transcript "OTTMUST00000123782.1";
mm10-chrY	HAVANA	exon	48408432	48408497	.	+	.	gene_id "ENSMUSG00000100423.1"; transcript_id "ENSMUST00000190629.1"; gene_type "lincRNA"; gene_name "Gm28754"; transcript_type "lincRNA"; transcript_name "Gm28754-202"; exon_number 3; exon_id "ENSMUSE00001323752.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048215.1"; havana_transcript "OTTMUST00000123782.1";
mm10-chrY	HAVANA	gene	48434615	48437850	.	+	.	gene_id "ENSMUSG00000100023.1"; gene_type "lincRNA"; gene_name "Gm28753"; level 2; havana_gene "OTTMUSG00000048216.1";
mm10-chrY	HAVANA	transcript	48434615	48437850	.	+	.	gene_id "ENSMUSG00000100023.1"; transcript_id "ENSMUST00000187804.1"; gene_type "lincRNA"; gene_name "Gm28753"; transcript_type "lincRNA"; transcript_name "Gm28753-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048216.1"; havana_transcript "OTTMUST00000123783.1";
mm10-chrY	HAVANA	exon	48434615	48435252	.	+	.	gene_id "ENSMUSG00000100023.1"; transcript_id "ENSMUST00000187804.1"; gene_type "lincRNA"; gene_name "Gm28753"; transcript_type "lincRNA"; transcript_name "Gm28753-201"; exon_number 1; exon_id "ENSMUSE00001335894.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048216.1"; havana_transcript "OTTMUST00000123783.1";
mm10-chrY	HAVANA	exon	48435736	48435921	.	+	.	gene_id "ENSMUSG00000100023.1"; transcript_id "ENSMUST00000187804.1"; gene_type "lincRNA"; gene_name "Gm28753"; transcript_type "lincRNA"; transcript_name "Gm28753-201"; exon_number 2; exon_id "ENSMUSE00001321976.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048216.1"; havana_transcript "OTTMUST00000123783.1";
mm10-chrY	HAVANA	exon	48436649	48436832	.	+	.	gene_id "ENSMUSG00000100023.1"; transcript_id "ENSMUST00000187804.1"; gene_type "lincRNA"; gene_name "Gm28753"; transcript_type "lincRNA"; transcript_name "Gm28753-201"; exon_number 3; exon_id "ENSMUSE00001334837.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048216.1"; havana_transcript "OTTMUST00000123783.1";
mm10-chrY	HAVANA	exon	48437361	48437850	.	+	.	gene_id "ENSMUSG00000100023.1"; transcript_id "ENSMUST00000187804.1"; gene_type "lincRNA"; gene_name "Gm28753"; transcript_type "lincRNA"; transcript_name "Gm28753-201"; exon_number 4; exon_id "ENSMUSE00001325221.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048216.1"; havana_transcript "OTTMUST00000123783.1";
mm10-chrY	HAVANA	transcript	48435067	48437429	.	+	.	gene_id "ENSMUSG00000100023.1"; transcript_id "ENSMUST00000188129.1"; gene_type "lincRNA"; gene_name "Gm28753"; transcript_type "lincRNA"; transcript_name "Gm28753-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048216.1"; havana_transcript "OTTMUST00000123784.1";
mm10-chrY	HAVANA	exon	48435067	48435252	.	+	.	gene_id "ENSMUSG00000100023.1"; transcript_id "ENSMUST00000188129.1"; gene_type "lincRNA"; gene_name "Gm28753"; transcript_type "lincRNA"; transcript_name "Gm28753-202"; exon_number 1; exon_id "ENSMUSE00001326054.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048216.1"; havana_transcript "OTTMUST00000123784.1";
mm10-chrY	HAVANA	exon	48435740	48435921	.	+	.	gene_id "ENSMUSG00000100023.1"; transcript_id "ENSMUST00000188129.1"; gene_type "lincRNA"; gene_name "Gm28753"; transcript_type "lincRNA"; transcript_name "Gm28753-202"; exon_number 2; exon_id "ENSMUSE00001330018.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048216.1"; havana_transcript "OTTMUST00000123784.1";
mm10-chrY	HAVANA	exon	48437361	48437429	.	+	.	gene_id "ENSMUSG00000100023.1"; transcript_id "ENSMUST00000188129.1"; gene_type "lincRNA"; gene_name "Gm28753"; transcript_type "lincRNA"; transcript_name "Gm28753-202"; exon_number 3; exon_id "ENSMUSE00001326437.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048216.1"; havana_transcript "OTTMUST00000123784.1";
mm10-chrY	HAVANA	gene	48527400	48553437	.	-	.	gene_id "ENSMUSG00000099915.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; level 2; havana_gene "OTTMUSG00000048186.1";
mm10-chrY	HAVANA	transcript	48527400	48553437	.	-	.	gene_id "ENSMUSG00000099915.1"; transcript_id "ENSMUST00000186484.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21191-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048186.1"; havana_transcript "OTTMUST00000123722.1";
mm10-chrY	HAVANA	exon	48553394	48553437	.	-	.	gene_id "ENSMUSG00000099915.1"; transcript_id "ENSMUST00000186484.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21191-201"; exon_number 1; exon_id "ENSMUSE00001328273.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048186.1"; havana_transcript "OTTMUST00000123722.1";
mm10-chrY	HAVANA	exon	48551881	48552012	.	-	.	gene_id "ENSMUSG00000099915.1"; transcript_id "ENSMUST00000186484.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21191-201"; exon_number 2; exon_id "ENSMUSE00001335437.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048186.1"; havana_transcript "OTTMUST00000123722.1";
mm10-chrY	HAVANA	exon	48546502	48546568	.	-	.	gene_id "ENSMUSG00000099915.1"; transcript_id "ENSMUST00000186484.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21191-201"; exon_number 3; exon_id "ENSMUSE00001326631.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048186.1"; havana_transcript "OTTMUST00000123722.1";
mm10-chrY	HAVANA	exon	48545892	48545926	.	-	.	gene_id "ENSMUSG00000099915.1"; transcript_id "ENSMUST00000186484.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21191-201"; exon_number 4; exon_id "ENSMUSE00001322536.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048186.1"; havana_transcript "OTTMUST00000123722.1";
mm10-chrY	HAVANA	exon	48538805	48538871	.	-	.	gene_id "ENSMUSG00000099915.1"; transcript_id "ENSMUST00000186484.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21191-201"; exon_number 5; exon_id "ENSMUSE00001319201.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048186.1"; havana_transcript "OTTMUST00000123722.1";
mm10-chrY	HAVANA	exon	48538206	48538240	.	-	.	gene_id "ENSMUSG00000099915.1"; transcript_id "ENSMUST00000186484.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21191-201"; exon_number 6; exon_id "ENSMUSE00001329571.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048186.1"; havana_transcript "OTTMUST00000123722.1";
mm10-chrY	HAVANA	exon	48530959	48531076	.	-	.	gene_id "ENSMUSG00000099915.1"; transcript_id "ENSMUST00000186484.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21191-201"; exon_number 7; exon_id "ENSMUSE00001323725.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048186.1"; havana_transcript "OTTMUST00000123722.1";
mm10-chrY	HAVANA	exon	48530116	48530215	.	-	.	gene_id "ENSMUSG00000099915.1"; transcript_id "ENSMUST00000186484.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21191-201"; exon_number 8; exon_id "ENSMUSE00001331531.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048186.1"; havana_transcript "OTTMUST00000123722.1";
mm10-chrY	HAVANA	exon	48527994	48528090	.	-	.	gene_id "ENSMUSG00000099915.1"; transcript_id "ENSMUST00000186484.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21191-201"; exon_number 9; exon_id "ENSMUSE00001324154.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048186.1"; havana_transcript "OTTMUST00000123722.1";
mm10-chrY	HAVANA	exon	48527400	48527634	.	-	.	gene_id "ENSMUSG00000099915.1"; transcript_id "ENSMUST00000186484.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21191"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21191-201"; exon_number 10; exon_id "ENSMUSE00001321038.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048186.1"; havana_transcript "OTTMUST00000123722.1";
mm10-chrY	HAVANA	gene	48594784	48595476	.	-	.	gene_id "ENSMUSG00000100086.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21271"; level 2; havana_gene "OTTMUSG00000048187.1";
mm10-chrY	HAVANA	transcript	48594784	48595476	.	-	.	gene_id "ENSMUSG00000100086.1"; transcript_id "ENSMUST00000186689.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21271"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21271-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048187.1"; havana_transcript "OTTMUST00000123723.1";
mm10-chrY	HAVANA	exon	48594784	48595476	.	-	.	gene_id "ENSMUSG00000100086.1"; transcript_id "ENSMUST00000186689.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21271"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21271-201"; exon_number 1; exon_id "ENSMUSE00001322482.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048187.1"; havana_transcript "OTTMUST00000123723.1";
mm10-chrY	HAVANA	gene	48669767	48670459	.	-	.	gene_id "ENSMUSG00000101310.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21281"; level 2; havana_gene "OTTMUSG00000048188.1";
mm10-chrY	HAVANA	transcript	48669767	48670459	.	-	.	gene_id "ENSMUSG00000101310.1"; transcript_id "ENSMUST00000189900.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21281"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21281-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048188.1"; havana_transcript "OTTMUST00000123724.1";
mm10-chrY	HAVANA	exon	48669767	48670459	.	-	.	gene_id "ENSMUSG00000101310.1"; transcript_id "ENSMUST00000189900.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21281"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21281-201"; exon_number 1; exon_id "ENSMUSE00001324256.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048188.1"; havana_transcript "OTTMUST00000123724.1";
mm10-chrY	HAVANA	gene	48699454	48700068	.	-	.	gene_id "ENSMUSG00000100646.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28193"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048189.1";
mm10-chrY	HAVANA	transcript	48699454	48700068	.	-	.	gene_id "ENSMUSG00000100646.1"; transcript_id "ENSMUST00000189863.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28193"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28193-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048189.1"; havana_transcript "OTTMUST00000123725.1";
mm10-chrY	HAVANA	exon	48699454	48700068	.	-	.	gene_id "ENSMUSG00000100646.1"; transcript_id "ENSMUST00000189863.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28193"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28193-201"; exon_number 1; exon_id "ENSMUSE00001319448.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048189.1"; havana_transcript "OTTMUST00000123725.1";
mm10-chrY	HAVANA	gene	48736321	48737018	.	-	.	gene_id "ENSMUSG00000101200.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20802"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048190.1";
mm10-chrY	HAVANA	transcript	48736321	48737018	.	-	.	gene_id "ENSMUSG00000101200.1"; transcript_id "ENSMUST00000190832.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20802"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20802-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048190.1"; havana_transcript "OTTMUST00000123726.1";
mm10-chrY	HAVANA	exon	48736321	48737018	.	-	.	gene_id "ENSMUSG00000101200.1"; transcript_id "ENSMUST00000190832.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20802"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20802-201"; exon_number 1; exon_id "ENSMUSE00001334494.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048190.1"; havana_transcript "OTTMUST00000123726.1";
mm10-chrY	HAVANA	gene	48787046	48790285	.	+	.	gene_id "ENSMUSG00000099903.1"; gene_type "lincRNA"; gene_name "Gm29070"; level 2; havana_gene "OTTMUSG00000048217.1";
mm10-chrY	HAVANA	transcript	48787046	48790285	.	+	.	gene_id "ENSMUSG00000099903.1"; transcript_id "ENSMUST00000188541.1"; gene_type "lincRNA"; gene_name "Gm29070"; transcript_type "lincRNA"; transcript_name "Gm29070-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048217.1"; havana_transcript "OTTMUST00000123785.1";
mm10-chrY	HAVANA	exon	48787046	48787685	.	+	.	gene_id "ENSMUSG00000099903.1"; transcript_id "ENSMUST00000188541.1"; gene_type "lincRNA"; gene_name "Gm29070"; transcript_type "lincRNA"; transcript_name "Gm29070-202"; exon_number 1; exon_id "ENSMUSE00001329686.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048217.1"; havana_transcript "OTTMUST00000123785.1";
mm10-chrY	HAVANA	exon	48788171	48788356	.	+	.	gene_id "ENSMUSG00000099903.1"; transcript_id "ENSMUST00000188541.1"; gene_type "lincRNA"; gene_name "Gm29070"; transcript_type "lincRNA"; transcript_name "Gm29070-202"; exon_number 2; exon_id "ENSMUSE00001321628.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048217.1"; havana_transcript "OTTMUST00000123785.1";
mm10-chrY	HAVANA	exon	48789086	48789269	.	+	.	gene_id "ENSMUSG00000099903.1"; transcript_id "ENSMUST00000188541.1"; gene_type "lincRNA"; gene_name "Gm29070"; transcript_type "lincRNA"; transcript_name "Gm29070-202"; exon_number 3; exon_id "ENSMUSE00001324667.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048217.1"; havana_transcript "OTTMUST00000123785.1";
mm10-chrY	HAVANA	exon	48789797	48790285	.	+	.	gene_id "ENSMUSG00000099903.1"; transcript_id "ENSMUST00000188541.1"; gene_type "lincRNA"; gene_name "Gm29070"; transcript_type "lincRNA"; transcript_name "Gm29070-202"; exon_number 4; exon_id "ENSMUSE00001323672.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048217.1"; havana_transcript "OTTMUST00000123785.1";
mm10-chrY	HAVANA	transcript	48787499	48789865	.	+	.	gene_id "ENSMUSG00000099903.1"; transcript_id "ENSMUST00000187934.1"; gene_type "lincRNA"; gene_name "Gm29070"; transcript_type "lincRNA"; transcript_name "Gm29070-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048217.1"; havana_transcript "OTTMUST00000123786.1";
mm10-chrY	HAVANA	exon	48787499	48787685	.	+	.	gene_id "ENSMUSG00000099903.1"; transcript_id "ENSMUST00000187934.1"; gene_type "lincRNA"; gene_name "Gm29070"; transcript_type "lincRNA"; transcript_name "Gm29070-201"; exon_number 1; exon_id "ENSMUSE00001325538.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048217.1"; havana_transcript "OTTMUST00000123786.1";
mm10-chrY	HAVANA	exon	48788175	48788356	.	+	.	gene_id "ENSMUSG00000099903.1"; transcript_id "ENSMUST00000187934.1"; gene_type "lincRNA"; gene_name "Gm29070"; transcript_type "lincRNA"; transcript_name "Gm29070-201"; exon_number 2; exon_id "ENSMUSE00001320184.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048217.1"; havana_transcript "OTTMUST00000123786.1";
mm10-chrY	HAVANA	exon	48789797	48789865	.	+	.	gene_id "ENSMUSG00000099903.1"; transcript_id "ENSMUST00000187934.1"; gene_type "lincRNA"; gene_name "Gm29070"; transcript_type "lincRNA"; transcript_name "Gm29070-201"; exon_number 3; exon_id "ENSMUSE00001332330.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048217.1"; havana_transcript "OTTMUST00000123786.1";
mm10-chrY	HAVANA	gene	48856497	48882617	.	+	.	gene_id "ENSMUSG00000100972.1"; gene_type "protein_coding"; gene_name "Gm28553"; level 2; havana_gene "OTTMUSG00000048191.1";
mm10-chrY	HAVANA	transcript	48856497	48882617	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	exon	48856497	48856540	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 1; exon_id "ENSMUSE00001335874.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	exon	48857905	48858036	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 2; exon_id "ENSMUSE00001332998.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	CDS	48857919	48858036	.	+	0	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 2; exon_id "ENSMUSE00001332998.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	start_codon	48857919	48857921	.	+	0	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 2; exon_id "ENSMUSE00001332998.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	exon	48863369	48863435	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 3; exon_id "ENSMUSE00001324773.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	CDS	48863369	48863435	.	+	2	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 3; exon_id "ENSMUSE00001324773.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	exon	48864056	48864090	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 4; exon_id "ENSMUSE00001328351.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	CDS	48864056	48864090	.	+	1	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 4; exon_id "ENSMUSE00001328351.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	exon	48871100	48871166	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 5; exon_id "ENSMUSE00001324663.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	CDS	48871100	48871166	.	+	2	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 5; exon_id "ENSMUSE00001324663.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	exon	48871750	48871784	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 6; exon_id "ENSMUSE00001334036.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	CDS	48871750	48871784	.	+	1	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 6; exon_id "ENSMUSE00001334036.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	exon	48878930	48879047	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 7; exon_id "ENSMUSE00001333745.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	CDS	48878930	48879047	.	+	2	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 7; exon_id "ENSMUSE00001333745.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	exon	48879797	48879896	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 8; exon_id "ENSMUSE00001324884.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	CDS	48879797	48879896	.	+	1	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 8; exon_id "ENSMUSE00001324884.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	exon	48881934	48882032	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 9; exon_id "ENSMUSE00001331366.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	CDS	48881934	48882032	.	+	0	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 9; exon_id "ENSMUSE00001331366.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	exon	48882392	48882617	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 10; exon_id "ENSMUSE00001334471.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	CDS	48882392	48882418	.	+	0	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 10; exon_id "ENSMUSE00001334471.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	stop_codon	48882419	48882421	.	+	0	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 10; exon_id "ENSMUSE00001334471.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	UTR	48856497	48856540	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 1; exon_id "ENSMUSE00001335874.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	UTR	48857905	48857918	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 2; exon_id "ENSMUSE00001332998.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	UTR	48882419	48882617	.	+	.	gene_id "ENSMUSG00000100972.1"; transcript_id "ENSMUST00000185924.1"; gene_type "protein_coding"; gene_name "Gm28553"; transcript_type "protein_coding"; transcript_name "Gm28553-201"; exon_number 10; exon_id "ENSMUSE00001334471.1"; level 2; protein_id "ENSMUSP00000139793.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048191.1"; havana_transcript "OTTMUST00000123727.1";
mm10-chrY	HAVANA	gene	48944174	48944869	.	-	.	gene_id "ENSMUSG00000099409.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28751"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048218.1";
mm10-chrY	HAVANA	transcript	48944174	48944869	.	-	.	gene_id "ENSMUSG00000099409.1"; transcript_id "ENSMUST00000189287.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28751"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28751-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048218.1"; havana_transcript "OTTMUST00000123787.1";
mm10-chrY	HAVANA	exon	48944174	48944869	.	-	.	gene_id "ENSMUSG00000099409.1"; transcript_id "ENSMUST00000189287.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28751"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28751-201"; exon_number 1; exon_id "ENSMUSE00001323413.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048218.1"; havana_transcript "OTTMUST00000123787.1";
mm10-chrY	HAVANA	gene	48981168	48981482	.	-	.	gene_id "ENSMUSG00000099522.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28752"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048219.1";
mm10-chrY	HAVANA	transcript	48981168	48981482	.	-	.	gene_id "ENSMUSG00000099522.1"; transcript_id "ENSMUST00000188340.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28752"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28752-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048219.1"; havana_transcript "OTTMUST00000123788.1";
mm10-chrY	HAVANA	exon	48981168	48981482	.	-	.	gene_id "ENSMUSG00000099522.1"; transcript_id "ENSMUST00000188340.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28752"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28752-201"; exon_number 1; exon_id "ENSMUSE00001326934.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048219.1"; havana_transcript "OTTMUST00000123788.1";
mm10-chrY	HAVANA	gene	49018254	49021493	.	+	.	gene_id "ENSMUSG00000100938.1"; gene_type "lincRNA"; gene_name "Gm28726"; level 2; havana_gene "OTTMUSG00000049444.1";
mm10-chrY	HAVANA	transcript	49018254	49021493	.	+	.	gene_id "ENSMUSG00000100938.1"; transcript_id "ENSMUST00000190994.1"; gene_type "lincRNA"; gene_name "Gm28726"; transcript_type "lincRNA"; transcript_name "Gm28726-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049444.1"; havana_transcript "OTTMUST00000126043.1";
mm10-chrY	HAVANA	exon	49018254	49018893	.	+	.	gene_id "ENSMUSG00000100938.1"; transcript_id "ENSMUST00000190994.1"; gene_type "lincRNA"; gene_name "Gm28726"; transcript_type "lincRNA"; transcript_name "Gm28726-201"; exon_number 1; exon_id "ENSMUSE00001333418.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049444.1"; havana_transcript "OTTMUST00000126043.1";
mm10-chrY	HAVANA	exon	49019379	49019564	.	+	.	gene_id "ENSMUSG00000100938.1"; transcript_id "ENSMUST00000190994.1"; gene_type "lincRNA"; gene_name "Gm28726"; transcript_type "lincRNA"; transcript_name "Gm28726-201"; exon_number 2; exon_id "ENSMUSE00001329345.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049444.1"; havana_transcript "OTTMUST00000126043.1";
mm10-chrY	HAVANA	exon	49020294	49020477	.	+	.	gene_id "ENSMUSG00000100938.1"; transcript_id "ENSMUST00000190994.1"; gene_type "lincRNA"; gene_name "Gm28726"; transcript_type "lincRNA"; transcript_name "Gm28726-201"; exon_number 3; exon_id "ENSMUSE00001318586.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049444.1"; havana_transcript "OTTMUST00000126043.1";
mm10-chrY	HAVANA	exon	49021004	49021493	.	+	.	gene_id "ENSMUSG00000100938.1"; transcript_id "ENSMUST00000190994.1"; gene_type "lincRNA"; gene_name "Gm28726"; transcript_type "lincRNA"; transcript_name "Gm28726-201"; exon_number 4; exon_id "ENSMUSE00001321994.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000049444.1"; havana_transcript "OTTMUST00000126043.1";
mm10-chrY	HAVANA	transcript	49018707	49021068	.	+	.	gene_id "ENSMUSG00000100938.1"; transcript_id "ENSMUST00000191027.1"; gene_type "lincRNA"; gene_name "Gm28726"; transcript_type "lincRNA"; transcript_name "Gm28726-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049444.1"; havana_transcript "OTTMUST00000126044.1";
mm10-chrY	HAVANA	exon	49018707	49018893	.	+	.	gene_id "ENSMUSG00000100938.1"; transcript_id "ENSMUST00000191027.1"; gene_type "lincRNA"; gene_name "Gm28726"; transcript_type "lincRNA"; transcript_name "Gm28726-202"; exon_number 1; exon_id "ENSMUSE00001326833.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049444.1"; havana_transcript "OTTMUST00000126044.1";
mm10-chrY	HAVANA	exon	49019383	49019564	.	+	.	gene_id "ENSMUSG00000100938.1"; transcript_id "ENSMUST00000191027.1"; gene_type "lincRNA"; gene_name "Gm28726"; transcript_type "lincRNA"; transcript_name "Gm28726-202"; exon_number 2; exon_id "ENSMUSE00001334143.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049444.1"; havana_transcript "OTTMUST00000126044.1";
mm10-chrY	HAVANA	exon	49021004	49021068	.	+	.	gene_id "ENSMUSG00000100938.1"; transcript_id "ENSMUST00000191027.1"; gene_type "lincRNA"; gene_name "Gm28726"; transcript_type "lincRNA"; transcript_name "Gm28726-202"; exon_number 3; exon_id "ENSMUSE00001321194.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000049444.1"; havana_transcript "OTTMUST00000126044.1";
mm10-chrY	HAVANA	gene	49318058	49318753	.	-	.	gene_id "ENSMUSG00000101821.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21308"; level 2; havana_gene "OTTMUSG00000048221.1";
mm10-chrY	HAVANA	transcript	49318058	49318753	.	-	.	gene_id "ENSMUSG00000101821.1"; transcript_id "ENSMUST00000186571.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21308"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21308-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048221.1"; havana_transcript "OTTMUST00000123791.1";
mm10-chrY	HAVANA	exon	49318058	49318753	.	-	.	gene_id "ENSMUSG00000101821.1"; transcript_id "ENSMUST00000186571.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21308"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21308-201"; exon_number 1; exon_id "ENSMUSE00001320295.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048221.1"; havana_transcript "OTTMUST00000123791.1";
mm10-chrY	HAVANA	gene	49401058	49401435	.	-	.	gene_id "ENSMUSG00000101950.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29267"; level 2; havana_gene "OTTMUSG00000048305.1";
mm10-chrY	HAVANA	transcript	49401058	49401435	.	-	.	gene_id "ENSMUSG00000101950.1"; transcript_id "ENSMUST00000191020.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29267"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29267-202"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048305.1"; havana_transcript "OTTMUST00000123929.1";
mm10-chrY	HAVANA	exon	49401058	49401435	.	-	.	gene_id "ENSMUSG00000101950.1"; transcript_id "ENSMUST00000191020.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29267"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29267-202"; exon_number 1; exon_id "ENSMUSE00001319110.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048305.1"; havana_transcript "OTTMUST00000123929.1";
mm10-chrY	HAVANA	gene	49430387	49431001	.	-	.	gene_id "ENSMUSG00000099441.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29268"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048306.1";
mm10-chrY	HAVANA	transcript	49430387	49431001	.	-	.	gene_id "ENSMUSG00000099441.1"; transcript_id "ENSMUST00000188669.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29268"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29268-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048306.1"; havana_transcript "OTTMUST00000123930.1";
mm10-chrY	HAVANA	exon	49430387	49431001	.	-	.	gene_id "ENSMUSG00000099441.1"; transcript_id "ENSMUST00000188669.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29268"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29268-201"; exon_number 1; exon_id "ENSMUSE00001327252.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048306.1"; havana_transcript "OTTMUST00000123930.1";
mm10-chrY	HAVANA	gene	49467287	49467982	.	-	.	gene_id "ENSMUSG00000100411.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29269"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048307.1";
mm10-chrY	HAVANA	transcript	49467287	49467982	.	-	.	gene_id "ENSMUSG00000100411.1"; transcript_id "ENSMUST00000190087.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29269"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29269-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048307.1"; havana_transcript "OTTMUST00000123931.1";
mm10-chrY	HAVANA	exon	49467287	49467982	.	-	.	gene_id "ENSMUSG00000100411.1"; transcript_id "ENSMUST00000190087.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29269"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29269-201"; exon_number 1; exon_id "ENSMUSE00001331326.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048307.1"; havana_transcript "OTTMUST00000123931.1";
mm10-chrY	HAVANA	gene	49473820	49477161	.	-	.	gene_id "ENSMUSG00000100970.1"; gene_type "lincRNA"; gene_name "Gm29270"; level 2; havana_gene "OTTMUSG00000048308.1";
mm10-chrY	HAVANA	transcript	49473820	49477161	.	-	.	gene_id "ENSMUSG00000100970.1"; transcript_id "ENSMUST00000188071.1"; gene_type "lincRNA"; gene_name "Gm29270"; transcript_type "lincRNA"; transcript_name "Gm29270-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048308.1"; havana_transcript "OTTMUST00000123932.1";
mm10-chrY	HAVANA	exon	49476939	49477161	.	-	.	gene_id "ENSMUSG00000100970.1"; transcript_id "ENSMUST00000188071.1"; gene_type "lincRNA"; gene_name "Gm29270"; transcript_type "lincRNA"; transcript_name "Gm29270-202"; exon_number 1; exon_id "ENSMUSE00001322428.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048308.1"; havana_transcript "OTTMUST00000123932.1";
mm10-chrY	HAVANA	exon	49473820	49475763	.	-	.	gene_id "ENSMUSG00000100970.1"; transcript_id "ENSMUST00000188071.1"; gene_type "lincRNA"; gene_name "Gm29270"; transcript_type "lincRNA"; transcript_name "Gm29270-202"; exon_number 2; exon_id "ENSMUSE00001327704.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048308.1"; havana_transcript "OTTMUST00000123932.1";
mm10-chrY	HAVANA	gene	49509048	49512286	.	+	.	gene_id "ENSMUSG00000101204.6"; gene_type "lincRNA"; gene_name "Gm29271"; level 2; havana_gene "OTTMUSG00000048309.1";
mm10-chrY	HAVANA	transcript	49509048	49512286	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000189943.6"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-203"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123933.1";
mm10-chrY	HAVANA	exon	49509048	49509687	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000189943.6"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-203"; exon_number 1; exon_id "ENSMUSE00001323052.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123933.1";
mm10-chrY	HAVANA	exon	49510173	49510358	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000189943.6"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-203"; exon_number 2; exon_id "ENSMUSE00001333458.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123933.1";
mm10-chrY	HAVANA	exon	49511087	49511270	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000189943.6"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-203"; exon_number 3; exon_id "ENSMUSE00001323585.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123933.1";
mm10-chrY	HAVANA	exon	49511798	49512286	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000189943.6"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-203"; exon_number 4; exon_id "ENSMUSE00001332166.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123933.1";
mm10-chrY	HAVANA	transcript	49509501	49511866	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000185438.6"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123934.1";
mm10-chrY	HAVANA	exon	49509501	49509687	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000185438.6"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-201"; exon_number 1; exon_id "ENSMUSE00001336087.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123934.1";
mm10-chrY	HAVANA	exon	49510177	49510358	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000185438.6"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-201"; exon_number 2; exon_id "ENSMUSE00001325053.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123934.1";
mm10-chrY	HAVANA	exon	49511798	49511866	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000185438.6"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-201"; exon_number 3; exon_id "ENSMUSE00001324406.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123934.1";
mm10-chrY	HAVANA	transcript	49509501	49511866	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000187018.1"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123935.1";
mm10-chrY	HAVANA	exon	49509501	49509687	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000187018.1"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-202"; exon_number 1; exon_id "ENSMUSE00001336087.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123935.1";
mm10-chrY	HAVANA	exon	49510177	49510358	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000187018.1"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-202"; exon_number 2; exon_id "ENSMUSE00001325053.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123935.1";
mm10-chrY	HAVANA	exon	49511087	49511270	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000187018.1"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-202"; exon_number 3; exon_id "ENSMUSE00001323585.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123935.1";
mm10-chrY	HAVANA	exon	49511798	49511866	.	+	.	gene_id "ENSMUSG00000101204.6"; transcript_id "ENSMUST00000187018.1"; gene_type "lincRNA"; gene_name "Gm29271"; transcript_type "lincRNA"; transcript_name "Gm29271-202"; exon_number 4; exon_id "ENSMUSE00001324406.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048309.1"; havana_transcript "OTTMUST00000123935.1";
mm10-chrY	HAVANA	gene	49571156	49597425	.	+	.	gene_id "ENSMUSG00000095979.7"; gene_type "protein_coding"; gene_name "Gm21209"; level 2; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	HAVANA	transcript	49571156	49597425	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	exon	49571156	49571199	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 1; exon_id "ENSMUSE00001331995.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	exon	49572565	49572696	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 2; exon_id "ENSMUSE00001333512.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	CDS	49572579	49572696	.	+	0	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 2; exon_id "ENSMUSE00001333512.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	start_codon	49572579	49572581	.	+	0	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 2; exon_id "ENSMUSE00001333512.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	exon	49578032	49578098	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 3; exon_id "ENSMUSE00001070491.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	CDS	49578032	49578098	.	+	2	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 3; exon_id "ENSMUSE00001070491.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	exon	49578783	49578817	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 4; exon_id "ENSMUSE00000987986.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	CDS	49578783	49578817	.	+	1	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 4; exon_id "ENSMUSE00000987986.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	exon	49585853	49585919	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 5; exon_id "ENSMUSE00001331042.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	CDS	49585853	49585919	.	+	2	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 5; exon_id "ENSMUSE00001331042.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	exon	49586504	49586538	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 6; exon_id "ENSMUSE00001322281.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	CDS	49586504	49586538	.	+	1	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 6; exon_id "ENSMUSE00001322281.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	exon	49593715	49593832	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 7; exon_id "ENSMUSE00001037774.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	CDS	49593715	49593832	.	+	2	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 7; exon_id "ENSMUSE00001037774.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	exon	49594599	49594698	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 8; exon_id "ENSMUSE00000976004.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	CDS	49594599	49594698	.	+	1	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 8; exon_id "ENSMUSE00000976004.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	exon	49596743	49596841	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 9; exon_id "ENSMUSE00000999091.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	CDS	49596743	49596841	.	+	0	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 9; exon_id "ENSMUSE00000999091.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	exon	49597201	49597425	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 10; exon_id "ENSMUSE00001333968.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	CDS	49597201	49597227	.	+	0	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 10; exon_id "ENSMUSE00001333968.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	stop_codon	49597228	49597230	.	+	0	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 10; exon_id "ENSMUSE00001333968.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	UTR	49571156	49571199	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 1; exon_id "ENSMUSE00001331995.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	UTR	49572565	49572578	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 2; exon_id "ENSMUSE00001333512.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	HAVANA	UTR	49597228	49597425	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000189354.6"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-202"; exon_number 10; exon_id "ENSMUSE00001333968.1"; level 2; protein_id "ENSMUSP00000139400.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048310.1"; havana_transcript "OTTMUST00000123936.1";
mm10-chrY	ENSEMBL	transcript	49572579	49597230	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	exon	49572579	49572696	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 1; exon_id "ENSMUSE00000974226.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	CDS	49572579	49572696	.	+	0	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 1; exon_id "ENSMUSE00000974226.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	start_codon	49572579	49572581	.	+	0	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 1; exon_id "ENSMUSE00000974226.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	exon	49578032	49578098	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 2; exon_id "ENSMUSE00001070491.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	CDS	49578032	49578098	.	+	2	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 2; exon_id "ENSMUSE00001070491.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	exon	49578783	49578817	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 3; exon_id "ENSMUSE00000987986.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	CDS	49578783	49578817	.	+	1	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 3; exon_id "ENSMUSE00000987986.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	exon	49593715	49593832	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 4; exon_id "ENSMUSE00001037774.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	CDS	49593715	49593832	.	+	2	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 4; exon_id "ENSMUSE00001037774.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	exon	49594599	49594698	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 5; exon_id "ENSMUSE00000976004.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	CDS	49594599	49594698	.	+	1	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 5; exon_id "ENSMUSE00000976004.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	exon	49596743	49596841	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 6; exon_id "ENSMUSE00000999091.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	CDS	49596743	49596841	.	+	0	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 6; exon_id "ENSMUSE00000999091.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	exon	49597201	49597230	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 7; exon_id "ENSMUSE00000982122.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	CDS	49597201	49597227	.	+	0	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 7; exon_id "ENSMUSE00000982122.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	stop_codon	49597228	49597230	.	+	0	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 7; exon_id "ENSMUSE00000982122.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	ENSEMBL	UTR	49597228	49597230	.	+	.	gene_id "ENSMUSG00000095979.7"; transcript_id "ENSMUST00000178556.1"; gene_type "protein_coding"; gene_name "Gm21209"; transcript_type "protein_coding"; transcript_name "Gm21209-201"; exon_number 7; exon_id "ENSMUSE00000982122.1"; level 3; protein_id "ENSMUSP00000136754.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048310.1";
mm10-chrY	HAVANA	gene	49658538	49659233	.	-	.	gene_id "ENSMUSG00000100564.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28682"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048311.1";
mm10-chrY	HAVANA	transcript	49658538	49659233	.	-	.	gene_id "ENSMUSG00000100564.1"; transcript_id "ENSMUST00000187430.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28682"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28682-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048311.1"; havana_transcript "OTTMUST00000123937.1";
mm10-chrY	HAVANA	exon	49658538	49659233	.	-	.	gene_id "ENSMUSG00000100564.1"; transcript_id "ENSMUST00000187430.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28682"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28682-201"; exon_number 1; exon_id "ENSMUSE00001318020.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048311.1"; havana_transcript "OTTMUST00000123937.1";
mm10-chrY	HAVANA	gene	49695505	49695819	.	-	.	gene_id "ENSMUSG00000101215.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28569"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048312.1";
mm10-chrY	HAVANA	transcript	49695505	49695819	.	-	.	gene_id "ENSMUSG00000101215.1"; transcript_id "ENSMUST00000188748.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28569"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28569-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048312.1"; havana_transcript "OTTMUST00000123938.1";
mm10-chrY	HAVANA	exon	49695505	49695819	.	-	.	gene_id "ENSMUSG00000101215.1"; transcript_id "ENSMUST00000188748.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28569"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28569-201"; exon_number 1; exon_id "ENSMUSE00001324167.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048312.1"; havana_transcript "OTTMUST00000123938.1";
mm10-chrY	HAVANA	gene	49697224	49700566	.	-	.	gene_id "ENSMUSG00000100206.1"; gene_type "lincRNA"; gene_name "Gm28681"; level 2; havana_gene "OTTMUSG00000048313.1";
mm10-chrY	HAVANA	transcript	49697224	49700566	.	-	.	gene_id "ENSMUSG00000100206.1"; transcript_id "ENSMUST00000187387.1"; gene_type "lincRNA"; gene_name "Gm28681"; transcript_type "lincRNA"; transcript_name "Gm28681-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048313.1"; havana_transcript "OTTMUST00000123939.1";
mm10-chrY	HAVANA	exon	49700344	49700566	.	-	.	gene_id "ENSMUSG00000100206.1"; transcript_id "ENSMUST00000187387.1"; gene_type "lincRNA"; gene_name "Gm28681"; transcript_type "lincRNA"; transcript_name "Gm28681-201"; exon_number 1; exon_id "ENSMUSE00001332680.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048313.1"; havana_transcript "OTTMUST00000123939.1";
mm10-chrY	HAVANA	exon	49697224	49699166	.	-	.	gene_id "ENSMUSG00000100206.1"; transcript_id "ENSMUST00000187387.1"; gene_type "lincRNA"; gene_name "Gm28681"; transcript_type "lincRNA"; transcript_name "Gm28681-201"; exon_number 2; exon_id "ENSMUSE00001325257.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048313.1"; havana_transcript "OTTMUST00000123939.1";
mm10-chrY	HAVANA	gene	49732439	49735678	.	+	.	gene_id "ENSMUSG00000100765.1"; gene_type "lincRNA"; gene_name "Gm28684"; level 2; havana_gene "OTTMUSG00000048314.1";
mm10-chrY	HAVANA	transcript	49732439	49735678	.	+	.	gene_id "ENSMUSG00000100765.1"; transcript_id "ENSMUST00000185586.1"; gene_type "lincRNA"; gene_name "Gm28684"; transcript_type "lincRNA"; transcript_name "Gm28684-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048314.1"; havana_transcript "OTTMUST00000123940.1";
mm10-chrY	HAVANA	exon	49732439	49733079	.	+	.	gene_id "ENSMUSG00000100765.1"; transcript_id "ENSMUST00000185586.1"; gene_type "lincRNA"; gene_name "Gm28684"; transcript_type "lincRNA"; transcript_name "Gm28684-201"; exon_number 1; exon_id "ENSMUSE00001330897.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048314.1"; havana_transcript "OTTMUST00000123940.1";
mm10-chrY	HAVANA	exon	49733565	49733750	.	+	.	gene_id "ENSMUSG00000100765.1"; transcript_id "ENSMUST00000185586.1"; gene_type "lincRNA"; gene_name "Gm28684"; transcript_type "lincRNA"; transcript_name "Gm28684-201"; exon_number 2; exon_id "ENSMUSE00001329437.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048314.1"; havana_transcript "OTTMUST00000123940.1";
mm10-chrY	HAVANA	exon	49734480	49734663	.	+	.	gene_id "ENSMUSG00000100765.1"; transcript_id "ENSMUST00000185586.1"; gene_type "lincRNA"; gene_name "Gm28684"; transcript_type "lincRNA"; transcript_name "Gm28684-201"; exon_number 3; exon_id "ENSMUSE00001332534.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048314.1"; havana_transcript "OTTMUST00000123940.1";
mm10-chrY	HAVANA	exon	49735190	49735678	.	+	.	gene_id "ENSMUSG00000100765.1"; transcript_id "ENSMUST00000185586.1"; gene_type "lincRNA"; gene_name "Gm28684"; transcript_type "lincRNA"; transcript_name "Gm28684-201"; exon_number 4; exon_id "ENSMUSE00001321446.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048314.1"; havana_transcript "OTTMUST00000123940.1";
mm10-chrY	HAVANA	transcript	49732893	49735258	.	+	.	gene_id "ENSMUSG00000100765.1"; transcript_id "ENSMUST00000189523.1"; gene_type "lincRNA"; gene_name "Gm28684"; transcript_type "lincRNA"; transcript_name "Gm28684-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048314.1"; havana_transcript "OTTMUST00000123941.1";
mm10-chrY	HAVANA	exon	49732893	49733079	.	+	.	gene_id "ENSMUSG00000100765.1"; transcript_id "ENSMUST00000189523.1"; gene_type "lincRNA"; gene_name "Gm28684"; transcript_type "lincRNA"; transcript_name "Gm28684-202"; exon_number 1; exon_id "ENSMUSE00001335451.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048314.1"; havana_transcript "OTTMUST00000123941.1";
mm10-chrY	HAVANA	exon	49733569	49733750	.	+	.	gene_id "ENSMUSG00000100765.1"; transcript_id "ENSMUST00000189523.1"; gene_type "lincRNA"; gene_name "Gm28684"; transcript_type "lincRNA"; transcript_name "Gm28684-202"; exon_number 2; exon_id "ENSMUSE00001325680.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048314.1"; havana_transcript "OTTMUST00000123941.1";
mm10-chrY	HAVANA	exon	49735190	49735258	.	+	.	gene_id "ENSMUSG00000100765.1"; transcript_id "ENSMUST00000189523.1"; gene_type "lincRNA"; gene_name "Gm28684"; transcript_type "lincRNA"; transcript_name "Gm28684-202"; exon_number 3; exon_id "ENSMUSE00001329988.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048314.1"; havana_transcript "OTTMUST00000123941.1";
mm10-chrY	HAVANA	gene	49842918	49843610	.	-	.	gene_id "ENSMUSG00000101475.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21316"; level 2; havana_gene "OTTMUSG00000048315.1";
mm10-chrY	HAVANA	transcript	49842918	49843610	.	-	.	gene_id "ENSMUSG00000101475.1"; transcript_id "ENSMUST00000191348.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21316"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21316-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048315.1"; havana_transcript "OTTMUST00000123942.1";
mm10-chrY	HAVANA	exon	49842918	49843610	.	-	.	gene_id "ENSMUSG00000101475.1"; transcript_id "ENSMUST00000191348.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21316"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21316-201"; exon_number 1; exon_id "ENSMUSE00001320489.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048315.1"; havana_transcript "OTTMUST00000123942.1";
mm10-chrY	HAVANA	gene	49917514	49918209	.	-	.	gene_id "ENSMUSG00000099713.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21923"; level 2; havana_gene "OTTMUSG00000048316.1";
mm10-chrY	HAVANA	transcript	49917514	49918209	.	-	.	gene_id "ENSMUSG00000099713.1"; transcript_id "ENSMUST00000188455.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21923"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21923-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048316.1"; havana_transcript "OTTMUST00000123943.1";
mm10-chrY	HAVANA	exon	49917514	49918209	.	-	.	gene_id "ENSMUSG00000099713.1"; transcript_id "ENSMUST00000188455.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21923"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21923-201"; exon_number 1; exon_id "ENSMUSE00001331314.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048316.1"; havana_transcript "OTTMUST00000123943.1";
mm10-chrY	HAVANA	gene	49947201	49947815	.	-	.	gene_id "ENSMUSG00000099831.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28683"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048317.1";
mm10-chrY	HAVANA	transcript	49947201	49947815	.	-	.	gene_id "ENSMUSG00000099831.1"; transcript_id "ENSMUST00000187134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28683"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28683-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048317.1"; havana_transcript "OTTMUST00000123944.1";
mm10-chrY	HAVANA	exon	49947201	49947815	.	-	.	gene_id "ENSMUSG00000099831.1"; transcript_id "ENSMUST00000187134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28683"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28683-201"; exon_number 1; exon_id "ENSMUSE00001331612.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048317.1"; havana_transcript "OTTMUST00000123944.1";
mm10-chrY	HAVANA	gene	49984024	49984503	.	-	.	gene_id "ENSMUSG00000101868.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28680"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048318.1";
mm10-chrY	HAVANA	transcript	49984024	49984503	.	-	.	gene_id "ENSMUSG00000101868.1"; transcript_id "ENSMUST00000186743.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28680"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28680-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048318.1"; havana_transcript "OTTMUST00000123945.1";
mm10-chrY	HAVANA	exon	49984024	49984503	.	-	.	gene_id "ENSMUSG00000101868.1"; transcript_id "ENSMUST00000186743.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28680"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28680-201"; exon_number 1; exon_id "ENSMUSE00001334763.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048318.1"; havana_transcript "OTTMUST00000123945.1";
mm10-chrY	HAVANA	gene	50028561	50031800	.	+	.	gene_id "ENSMUSG00000100914.1"; gene_type "lincRNA"; gene_name "Gm28679"; level 2; havana_gene "OTTMUSG00000048319.1";
mm10-chrY	HAVANA	transcript	50028561	50031800	.	+	.	gene_id "ENSMUSG00000100914.1"; transcript_id "ENSMUST00000186013.1"; gene_type "lincRNA"; gene_name "Gm28679"; transcript_type "lincRNA"; transcript_name "Gm28679-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048319.1"; havana_transcript "OTTMUST00000123946.1";
mm10-chrY	HAVANA	exon	50028561	50029200	.	+	.	gene_id "ENSMUSG00000100914.1"; transcript_id "ENSMUST00000186013.1"; gene_type "lincRNA"; gene_name "Gm28679"; transcript_type "lincRNA"; transcript_name "Gm28679-201"; exon_number 1; exon_id "ENSMUSE00001332852.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048319.1"; havana_transcript "OTTMUST00000123946.1";
mm10-chrY	HAVANA	exon	50029686	50029871	.	+	.	gene_id "ENSMUSG00000100914.1"; transcript_id "ENSMUST00000186013.1"; gene_type "lincRNA"; gene_name "Gm28679"; transcript_type "lincRNA"; transcript_name "Gm28679-201"; exon_number 2; exon_id "ENSMUSE00001320834.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048319.1"; havana_transcript "OTTMUST00000123946.1";
mm10-chrY	HAVANA	exon	50030602	50030785	.	+	.	gene_id "ENSMUSG00000100914.1"; transcript_id "ENSMUST00000186013.1"; gene_type "lincRNA"; gene_name "Gm28679"; transcript_type "lincRNA"; transcript_name "Gm28679-201"; exon_number 3; exon_id "ENSMUSE00001321254.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048319.1"; havana_transcript "OTTMUST00000123946.1";
mm10-chrY	HAVANA	exon	50031312	50031800	.	+	.	gene_id "ENSMUSG00000100914.1"; transcript_id "ENSMUST00000186013.1"; gene_type "lincRNA"; gene_name "Gm28679"; transcript_type "lincRNA"; transcript_name "Gm28679-201"; exon_number 4; exon_id "ENSMUSE00001325418.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048319.1"; havana_transcript "OTTMUST00000123946.1";
mm10-chrY	HAVANA	transcript	50029014	50031380	.	+	.	gene_id "ENSMUSG00000100914.1"; transcript_id "ENSMUST00000186968.1"; gene_type "lincRNA"; gene_name "Gm28679"; transcript_type "lincRNA"; transcript_name "Gm28679-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048319.1"; havana_transcript "OTTMUST00000123947.1";
mm10-chrY	HAVANA	exon	50029014	50029200	.	+	.	gene_id "ENSMUSG00000100914.1"; transcript_id "ENSMUST00000186968.1"; gene_type "lincRNA"; gene_name "Gm28679"; transcript_type "lincRNA"; transcript_name "Gm28679-202"; exon_number 1; exon_id "ENSMUSE00001329628.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048319.1"; havana_transcript "OTTMUST00000123947.1";
mm10-chrY	HAVANA	exon	50029690	50029871	.	+	.	gene_id "ENSMUSG00000100914.1"; transcript_id "ENSMUST00000186968.1"; gene_type "lincRNA"; gene_name "Gm28679"; transcript_type "lincRNA"; transcript_name "Gm28679-202"; exon_number 2; exon_id "ENSMUSE00001321177.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048319.1"; havana_transcript "OTTMUST00000123947.1";
mm10-chrY	HAVANA	exon	50031312	50031380	.	+	.	gene_id "ENSMUSG00000100914.1"; transcript_id "ENSMUST00000186968.1"; gene_type "lincRNA"; gene_name "Gm28679"; transcript_type "lincRNA"; transcript_name "Gm28679-202"; exon_number 3; exon_id "ENSMUSE00001318038.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048319.1"; havana_transcript "OTTMUST00000123947.1";
mm10-chrY	HAVANA	gene	50097276	50122131	.	+	.	gene_id "ENSMUSG00000100338.2"; gene_type "protein_coding"; gene_name "Gm28870"; level 2; havana_gene "OTTMUSG00000050769.1";
mm10-chrY	HAVANA	transcript	50097276	50122131	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	exon	50097276	50097407	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 1; exon_id "ENSMUSE00001327917.2"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	CDS	50097290	50097407	.	+	0	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 1; exon_id "ENSMUSE00001327917.2"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	start_codon	50097290	50097292	.	+	0	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 1; exon_id "ENSMUSE00001327917.2"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	exon	50102745	50102811	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 2; exon_id "ENSMUSE00001322902.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	CDS	50102745	50102811	.	+	2	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 2; exon_id "ENSMUSE00001322902.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	exon	50103466	50103500	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 3; exon_id "ENSMUSE00001321086.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	CDS	50103466	50103500	.	+	1	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 3; exon_id "ENSMUSE00001321086.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	exon	50110539	50110605	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 4; exon_id "ENSMUSE00001336005.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	CDS	50110539	50110605	.	+	2	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 4; exon_id "ENSMUSE00001336005.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	exon	50111192	50111226	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 5; exon_id "ENSMUSE00001318268.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	CDS	50111192	50111226	.	+	1	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 5; exon_id "ENSMUSE00001318268.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	exon	50118392	50118509	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 6; exon_id "ENSMUSE00001318605.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	CDS	50118392	50118509	.	+	2	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 6; exon_id "ENSMUSE00001318605.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	exon	50119299	50119398	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 7; exon_id "ENSMUSE00001324530.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	CDS	50119299	50119398	.	+	1	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 7; exon_id "ENSMUSE00001324530.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	exon	50121447	50121545	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 8; exon_id "ENSMUSE00001327162.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	CDS	50121447	50121545	.	+	0	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 8; exon_id "ENSMUSE00001327162.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	exon	50121905	50122131	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 9; exon_id "ENSMUSE00001341608.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	CDS	50121905	50121931	.	+	0	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 9; exon_id "ENSMUSE00001341608.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	stop_codon	50121932	50121934	.	+	0	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 9; exon_id "ENSMUSE00001341608.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	UTR	50097276	50097289	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 1; exon_id "ENSMUSE00001327917.2"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	UTR	50121932	50122131	.	+	.	gene_id "ENSMUSG00000100338.2"; transcript_id "ENSMUST00000187033.2"; gene_type "protein_coding"; gene_name "Gm28870"; transcript_type "protein_coding"; transcript_name "Gm28870-201"; exon_number 9; exon_id "ENSMUSE00001341608.1"; level 2; protein_id "ENSMUSP00000141382.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000050769.1"; havana_transcript "OTTMUST00000128688.1";
mm10-chrY	HAVANA	gene	50182494	50183180	.	-	.	gene_id "ENSMUSG00000100541.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28871"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048321.1";
mm10-chrY	HAVANA	transcript	50182494	50183180	.	-	.	gene_id "ENSMUSG00000100541.1"; transcript_id "ENSMUST00000186191.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28871-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048321.1"; havana_transcript "OTTMUST00000123949.1";
mm10-chrY	HAVANA	exon	50182494	50183180	.	-	.	gene_id "ENSMUSG00000100541.1"; transcript_id "ENSMUST00000186191.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28871-201"; exon_number 1; exon_id "ENSMUSE00001332350.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048321.1"; havana_transcript "OTTMUST00000123949.1";
mm10-chrY	HAVANA	gene	50219469	50219783	.	-	.	gene_id "ENSMUSG00000099367.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29512"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048353.1";
mm10-chrY	HAVANA	transcript	50219469	50219783	.	-	.	gene_id "ENSMUSG00000099367.1"; transcript_id "ENSMUST00000185544.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29512"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29512-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048353.1"; havana_transcript "OTTMUST00000123994.1";
mm10-chrY	HAVANA	exon	50219469	50219783	.	-	.	gene_id "ENSMUSG00000099367.1"; transcript_id "ENSMUST00000185544.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29512"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29512-201"; exon_number 1; exon_id "ENSMUSE00001321422.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048353.1"; havana_transcript "OTTMUST00000123994.1";
mm10-chrY	HAVANA	gene	50258987	50262223	.	+	.	gene_id "ENSMUSG00000099666.6"; gene_type "lincRNA"; gene_name "Gm29511"; level 2; havana_gene "OTTMUSG00000048354.1";
mm10-chrY	HAVANA	transcript	50258987	50262223	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000187580.6"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123995.1";
mm10-chrY	HAVANA	exon	50258987	50259624	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000187580.6"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-201"; exon_number 1; exon_id "ENSMUSE00001334210.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123995.1";
mm10-chrY	HAVANA	exon	50260110	50260295	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000187580.6"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-201"; exon_number 2; exon_id "ENSMUSE00001334793.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123995.1";
mm10-chrY	HAVANA	exon	50261025	50261208	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000187580.6"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-201"; exon_number 3; exon_id "ENSMUSE00001335381.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123995.1";
mm10-chrY	HAVANA	exon	50261735	50262223	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000187580.6"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-201"; exon_number 4; exon_id "ENSMUSE00001325651.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123995.1";
mm10-chrY	HAVANA	transcript	50259439	50261803	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000189473.6"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123996.1";
mm10-chrY	HAVANA	exon	50259439	50259624	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000189473.6"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-202"; exon_number 1; exon_id "ENSMUSE00001326062.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123996.1";
mm10-chrY	HAVANA	exon	50260114	50260295	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000189473.6"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-202"; exon_number 2; exon_id "ENSMUSE00001322259.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123996.1";
mm10-chrY	HAVANA	exon	50261025	50261208	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000189473.6"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-202"; exon_number 3; exon_id "ENSMUSE00001335381.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123996.1";
mm10-chrY	HAVANA	exon	50261735	50261803	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000189473.6"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-202"; exon_number 4; exon_id "ENSMUSE00001330389.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123996.1";
mm10-chrY	HAVANA	transcript	50259439	50261803	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000191309.1"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123997.1";
mm10-chrY	HAVANA	exon	50259439	50259624	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000191309.1"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-203"; exon_number 1; exon_id "ENSMUSE00001326062.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123997.1";
mm10-chrY	HAVANA	exon	50260114	50260295	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000191309.1"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-203"; exon_number 2; exon_id "ENSMUSE00001322259.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123997.1";
mm10-chrY	HAVANA	exon	50261735	50261803	.	+	.	gene_id "ENSMUSG00000099666.6"; transcript_id "ENSMUST00000191309.1"; gene_type "lincRNA"; gene_name "Gm29511"; transcript_type "lincRNA"; transcript_name "Gm29511-203"; exon_number 3; exon_id "ENSMUSE00001330389.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048354.1"; havana_transcript "OTTMUST00000123997.1";
mm10-chrY	HAVANA	gene	50360460	50361155	.	-	.	gene_id "ENSMUSG00000100331.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20880"; level 2; havana_gene "OTTMUSG00000048370.1";
mm10-chrY	HAVANA	transcript	50360460	50361155	.	-	.	gene_id "ENSMUSG00000100331.1"; transcript_id "ENSMUST00000187276.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20880"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20880-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048370.1"; havana_transcript "OTTMUST00000124047.1";
mm10-chrY	HAVANA	exon	50360460	50361155	.	-	.	gene_id "ENSMUSG00000100331.1"; transcript_id "ENSMUST00000187276.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20880"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20880-201"; exon_number 1; exon_id "ENSMUSE00001326236.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048370.1"; havana_transcript "OTTMUST00000124047.1";
mm10-chrY	HAVANA	gene	50435167	50435859	.	-	.	gene_id "ENSMUSG00000100390.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20881"; level 2; havana_gene "OTTMUSG00000048371.1";
mm10-chrY	HAVANA	transcript	50435167	50435859	.	-	.	gene_id "ENSMUSG00000100390.1"; transcript_id "ENSMUST00000186397.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20881"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20881-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048371.1"; havana_transcript "OTTMUST00000124048.1";
mm10-chrY	HAVANA	exon	50435167	50435859	.	-	.	gene_id "ENSMUSG00000100390.1"; transcript_id "ENSMUST00000186397.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20881"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20881-201"; exon_number 1; exon_id "ENSMUSE00001334985.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048371.1"; havana_transcript "OTTMUST00000124048.1";
mm10-chrY	HAVANA	gene	50464806	50465420	.	-	.	gene_id "ENSMUSG00000101263.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29121"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048372.1";
mm10-chrY	HAVANA	transcript	50464806	50465420	.	-	.	gene_id "ENSMUSG00000101263.1"; transcript_id "ENSMUST00000187611.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29121"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29121-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048372.1"; havana_transcript "OTTMUST00000124049.1";
mm10-chrY	HAVANA	exon	50464806	50465420	.	-	.	gene_id "ENSMUSG00000101263.1"; transcript_id "ENSMUST00000187611.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29121"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29121-201"; exon_number 1; exon_id "ENSMUSE00001331015.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048372.1"; havana_transcript "OTTMUST00000124049.1";
mm10-chrY	HAVANA	gene	50501514	50502209	.	-	.	gene_id "ENSMUSG00000099986.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29120"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048373.1";
mm10-chrY	HAVANA	transcript	50501514	50502209	.	-	.	gene_id "ENSMUSG00000099986.1"; transcript_id "ENSMUST00000186111.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29120"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29120-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048373.1"; havana_transcript "OTTMUST00000124050.1";
mm10-chrY	HAVANA	exon	50501514	50502209	.	-	.	gene_id "ENSMUSG00000099986.1"; transcript_id "ENSMUST00000186111.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29120"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29120-201"; exon_number 1; exon_id "ENSMUSE00001328040.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048373.1"; havana_transcript "OTTMUST00000124050.1";
mm10-chrY	HAVANA	gene	50544517	50547755	.	+	.	gene_id "ENSMUSG00000100118.1"; gene_type "lincRNA"; gene_name "Gm29117"; level 2; havana_gene "OTTMUSG00000048374.1";
mm10-chrY	HAVANA	transcript	50544517	50547755	.	+	.	gene_id "ENSMUSG00000100118.1"; transcript_id "ENSMUST00000190374.1"; gene_type "lincRNA"; gene_name "Gm29117"; transcript_type "lincRNA"; transcript_name "Gm29117-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048374.1"; havana_transcript "OTTMUST00000124051.1";
mm10-chrY	HAVANA	exon	50544517	50545155	.	+	.	gene_id "ENSMUSG00000100118.1"; transcript_id "ENSMUST00000190374.1"; gene_type "lincRNA"; gene_name "Gm29117"; transcript_type "lincRNA"; transcript_name "Gm29117-202"; exon_number 1; exon_id "ENSMUSE00001323650.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048374.1"; havana_transcript "OTTMUST00000124051.1";
mm10-chrY	HAVANA	exon	50545641	50545826	.	+	.	gene_id "ENSMUSG00000100118.1"; transcript_id "ENSMUST00000190374.1"; gene_type "lincRNA"; gene_name "Gm29117"; transcript_type "lincRNA"; transcript_name "Gm29117-202"; exon_number 2; exon_id "ENSMUSE00001332685.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048374.1"; havana_transcript "OTTMUST00000124051.1";
mm10-chrY	HAVANA	exon	50546556	50546739	.	+	.	gene_id "ENSMUSG00000100118.1"; transcript_id "ENSMUST00000190374.1"; gene_type "lincRNA"; gene_name "Gm29117"; transcript_type "lincRNA"; transcript_name "Gm29117-202"; exon_number 3; exon_id "ENSMUSE00001325278.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048374.1"; havana_transcript "OTTMUST00000124051.1";
mm10-chrY	HAVANA	exon	50547267	50547755	.	+	.	gene_id "ENSMUSG00000100118.1"; transcript_id "ENSMUST00000190374.1"; gene_type "lincRNA"; gene_name "Gm29117"; transcript_type "lincRNA"; transcript_name "Gm29117-202"; exon_number 4; exon_id "ENSMUSE00001330297.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048374.1"; havana_transcript "OTTMUST00000124051.1";
mm10-chrY	HAVANA	transcript	50544969	50547335	.	+	.	gene_id "ENSMUSG00000100118.1"; transcript_id "ENSMUST00000185246.1"; gene_type "lincRNA"; gene_name "Gm29117"; transcript_type "lincRNA"; transcript_name "Gm29117-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048374.1"; havana_transcript "OTTMUST00000124052.1";
mm10-chrY	HAVANA	exon	50544969	50545155	.	+	.	gene_id "ENSMUSG00000100118.1"; transcript_id "ENSMUST00000185246.1"; gene_type "lincRNA"; gene_name "Gm29117"; transcript_type "lincRNA"; transcript_name "Gm29117-201"; exon_number 1; exon_id "ENSMUSE00001333553.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048374.1"; havana_transcript "OTTMUST00000124052.1";
mm10-chrY	HAVANA	exon	50545645	50545826	.	+	.	gene_id "ENSMUSG00000100118.1"; transcript_id "ENSMUST00000185246.1"; gene_type "lincRNA"; gene_name "Gm29117"; transcript_type "lincRNA"; transcript_name "Gm29117-201"; exon_number 2; exon_id "ENSMUSE00001322277.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048374.1"; havana_transcript "OTTMUST00000124052.1";
mm10-chrY	HAVANA	exon	50547267	50547335	.	+	.	gene_id "ENSMUSG00000100118.1"; transcript_id "ENSMUST00000185246.1"; gene_type "lincRNA"; gene_name "Gm29117"; transcript_type "lincRNA"; transcript_name "Gm29117-201"; exon_number 3; exon_id "ENSMUSE00001330401.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048374.1"; havana_transcript "OTTMUST00000124052.1";
mm10-chrY	HAVANA	gene	50608251	50634461	.	+	.	gene_id "ENSMUSG00000102122.1"; gene_type "protein_coding"; gene_name "Gm20883"; level 2; havana_gene "OTTMUSG00000048375.1";
mm10-chrY	HAVANA	transcript	50608251	50634461	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	exon	50608251	50608294	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 1; exon_id "ENSMUSE00001329304.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	exon	50609661	50609792	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 2; exon_id "ENSMUSE00001330895.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	CDS	50609675	50609792	.	+	0	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 2; exon_id "ENSMUSE00001330895.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	start_codon	50609675	50609677	.	+	0	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 2; exon_id "ENSMUSE00001330895.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	exon	50615127	50615193	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 3; exon_id "ENSMUSE00001334213.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	CDS	50615127	50615193	.	+	2	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 3; exon_id "ENSMUSE00001334213.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	exon	50615868	50615902	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 4; exon_id "ENSMUSE00001319225.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	CDS	50615868	50615902	.	+	1	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 4; exon_id "ENSMUSE00001319225.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	exon	50622913	50622979	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 5; exon_id "ENSMUSE00001319072.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	CDS	50622913	50622979	.	+	2	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 5; exon_id "ENSMUSE00001319072.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	exon	50623555	50623589	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 6; exon_id "ENSMUSE00001329573.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	CDS	50623555	50623589	.	+	1	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 6; exon_id "ENSMUSE00001329573.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	exon	50630753	50630870	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 7; exon_id "ENSMUSE00001320254.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	CDS	50630753	50630870	.	+	2	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 7; exon_id "ENSMUSE00001320254.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	exon	50631649	50631748	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 8; exon_id "ENSMUSE00001323636.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	CDS	50631649	50631748	.	+	1	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 8; exon_id "ENSMUSE00001323636.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	exon	50633779	50633877	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 9; exon_id "ENSMUSE00001329903.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	CDS	50633779	50633877	.	+	0	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 9; exon_id "ENSMUSE00001329903.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	exon	50634237	50634461	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 10; exon_id "ENSMUSE00001324641.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	CDS	50634237	50634263	.	+	0	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 10; exon_id "ENSMUSE00001324641.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	stop_codon	50634264	50634266	.	+	0	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 10; exon_id "ENSMUSE00001324641.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	UTR	50608251	50608294	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 1; exon_id "ENSMUSE00001329304.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	UTR	50609661	50609674	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 2; exon_id "ENSMUSE00001330895.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	UTR	50634264	50634461	.	+	.	gene_id "ENSMUSG00000102122.1"; transcript_id "ENSMUST00000185245.1"; gene_type "protein_coding"; gene_name "Gm20883"; transcript_type "protein_coding"; transcript_name "Gm20883-201"; exon_number 10; exon_id "ENSMUSE00001324641.1"; level 2; protein_id "ENSMUSP00000140542.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048375.1"; havana_transcript "OTTMUST00000124053.1";
mm10-chrY	HAVANA	gene	50696018	50696713	.	-	.	gene_id "ENSMUSG00000099513.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29119"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048376.1";
mm10-chrY	HAVANA	transcript	50696018	50696713	.	-	.	gene_id "ENSMUSG00000099513.1"; transcript_id "ENSMUST00000189973.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29119"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29119-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048376.1"; havana_transcript "OTTMUST00000124054.1";
mm10-chrY	HAVANA	exon	50696018	50696713	.	-	.	gene_id "ENSMUSG00000099513.1"; transcript_id "ENSMUST00000189973.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29119"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29119-201"; exon_number 1; exon_id "ENSMUSE00001330916.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048376.1"; havana_transcript "OTTMUST00000124054.1";
mm10-chrY	HAVANA	gene	50733012	50733326	.	-	.	gene_id "ENSMUSG00000101552.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29118"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048377.1";
mm10-chrY	HAVANA	transcript	50733012	50733326	.	-	.	gene_id "ENSMUSG00000101552.1"; transcript_id "ENSMUST00000186908.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29118"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29118-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048377.1"; havana_transcript "OTTMUST00000124055.1";
mm10-chrY	HAVANA	exon	50733012	50733326	.	-	.	gene_id "ENSMUSG00000101552.1"; transcript_id "ENSMUST00000186908.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29118"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29118-201"; exon_number 1; exon_id "ENSMUSE00001321401.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048377.1"; havana_transcript "OTTMUST00000124055.1";
mm10-chrY	HAVANA	gene	50770044	50773283	.	+	.	gene_id "ENSMUSG00000100388.1"; gene_type "lincRNA"; gene_name "Gm29116"; level 2; havana_gene "OTTMUSG00000048378.1";
mm10-chrY	HAVANA	transcript	50770044	50773283	.	+	.	gene_id "ENSMUSG00000100388.1"; transcript_id "ENSMUST00000189963.1"; gene_type "lincRNA"; gene_name "Gm29116"; transcript_type "lincRNA"; transcript_name "Gm29116-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048378.1"; havana_transcript "OTTMUST00000124056.1";
mm10-chrY	HAVANA	exon	50770044	50770683	.	+	.	gene_id "ENSMUSG00000100388.1"; transcript_id "ENSMUST00000189963.1"; gene_type "lincRNA"; gene_name "Gm29116"; transcript_type "lincRNA"; transcript_name "Gm29116-202"; exon_number 1; exon_id "ENSMUSE00001335116.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048378.1"; havana_transcript "OTTMUST00000124056.1";
mm10-chrY	HAVANA	exon	50771169	50771354	.	+	.	gene_id "ENSMUSG00000100388.1"; transcript_id "ENSMUST00000189963.1"; gene_type "lincRNA"; gene_name "Gm29116"; transcript_type "lincRNA"; transcript_name "Gm29116-202"; exon_number 2; exon_id "ENSMUSE00001330683.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048378.1"; havana_transcript "OTTMUST00000124056.1";
mm10-chrY	HAVANA	exon	50772084	50772267	.	+	.	gene_id "ENSMUSG00000100388.1"; transcript_id "ENSMUST00000189963.1"; gene_type "lincRNA"; gene_name "Gm29116"; transcript_type "lincRNA"; transcript_name "Gm29116-202"; exon_number 3; exon_id "ENSMUSE00001336003.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048378.1"; havana_transcript "OTTMUST00000124056.1";
mm10-chrY	HAVANA	exon	50772794	50773283	.	+	.	gene_id "ENSMUSG00000100388.1"; transcript_id "ENSMUST00000189963.1"; gene_type "lincRNA"; gene_name "Gm29116"; transcript_type "lincRNA"; transcript_name "Gm29116-202"; exon_number 4; exon_id "ENSMUSE00001327821.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048378.1"; havana_transcript "OTTMUST00000124056.1";
mm10-chrY	HAVANA	transcript	50770497	50772858	.	+	.	gene_id "ENSMUSG00000100388.1"; transcript_id "ENSMUST00000185583.1"; gene_type "lincRNA"; gene_name "Gm29116"; transcript_type "lincRNA"; transcript_name "Gm29116-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048378.1"; havana_transcript "OTTMUST00000124057.1";
mm10-chrY	HAVANA	exon	50770497	50770683	.	+	.	gene_id "ENSMUSG00000100388.1"; transcript_id "ENSMUST00000185583.1"; gene_type "lincRNA"; gene_name "Gm29116"; transcript_type "lincRNA"; transcript_name "Gm29116-201"; exon_number 1; exon_id "ENSMUSE00001332152.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048378.1"; havana_transcript "OTTMUST00000124057.1";
mm10-chrY	HAVANA	exon	50771173	50771354	.	+	.	gene_id "ENSMUSG00000100388.1"; transcript_id "ENSMUST00000185583.1"; gene_type "lincRNA"; gene_name "Gm29116"; transcript_type "lincRNA"; transcript_name "Gm29116-201"; exon_number 2; exon_id "ENSMUSE00001335970.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048378.1"; havana_transcript "OTTMUST00000124057.1";
mm10-chrY	HAVANA	exon	50772794	50772858	.	+	.	gene_id "ENSMUSG00000100388.1"; transcript_id "ENSMUST00000185583.1"; gene_type "lincRNA"; gene_name "Gm29116"; transcript_type "lincRNA"; transcript_name "Gm29116-201"; exon_number 3; exon_id "ENSMUSE00001327219.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048378.1"; havana_transcript "OTTMUST00000124057.1";
mm10-chrY	HAVANA	gene	50880164	50880859	.	-	.	gene_id "ENSMUSG00000100802.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20889"; level 2; havana_gene "OTTMUSG00000048379.1";
mm10-chrY	HAVANA	transcript	50880164	50880859	.	-	.	gene_id "ENSMUSG00000100802.1"; transcript_id "ENSMUST00000185749.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20889"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20889-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048379.1"; havana_transcript "OTTMUST00000124058.1";
mm10-chrY	HAVANA	exon	50880164	50880859	.	-	.	gene_id "ENSMUSG00000100802.1"; transcript_id "ENSMUST00000185749.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20889"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20889-201"; exon_number 1; exon_id "ENSMUSE00001320245.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048379.1"; havana_transcript "OTTMUST00000124058.1";
mm10-chrY	HAVANA	gene	50954836	50955531	.	-	.	gene_id "ENSMUSG00000101752.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20887"; level 2; havana_gene "OTTMUSG00000048380.1";
mm10-chrY	HAVANA	transcript	50954836	50955531	.	-	.	gene_id "ENSMUSG00000101752.1"; transcript_id "ENSMUST00000188597.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20887"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20887-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048380.1"; havana_transcript "OTTMUST00000124059.1";
mm10-chrY	HAVANA	exon	50954836	50955531	.	-	.	gene_id "ENSMUSG00000101752.1"; transcript_id "ENSMUST00000188597.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20887"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20887-201"; exon_number 1; exon_id "ENSMUSE00001335810.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048380.1"; havana_transcript "OTTMUST00000124059.1";
mm10-chrY	HAVANA	gene	50984439	50985053	.	-	.	gene_id "ENSMUSG00000099867.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29320"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048381.1";
mm10-chrY	HAVANA	transcript	50984439	50985053	.	-	.	gene_id "ENSMUSG00000099867.1"; transcript_id "ENSMUST00000185235.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29320"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29320-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048381.1"; havana_transcript "OTTMUST00000124060.1";
mm10-chrY	HAVANA	exon	50984439	50985053	.	-	.	gene_id "ENSMUSG00000099867.1"; transcript_id "ENSMUST00000185235.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29320"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29320-201"; exon_number 1; exon_id "ENSMUSE00001334642.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048381.1"; havana_transcript "OTTMUST00000124060.1";
mm10-chrY	HAVANA	gene	51021097	51021792	.	-	.	gene_id "ENSMUSG00000101193.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21849"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048382.1";
mm10-chrY	HAVANA	transcript	51021097	51021792	.	-	.	gene_id "ENSMUSG00000101193.1"; transcript_id "ENSMUST00000191571.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21849"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21849-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048382.1"; havana_transcript "OTTMUST00000124061.1";
mm10-chrY	HAVANA	exon	51021097	51021792	.	-	.	gene_id "ENSMUSG00000101193.1"; transcript_id "ENSMUST00000191571.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21849"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21849-201"; exon_number 1; exon_id "ENSMUSE00001334256.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048382.1"; havana_transcript "OTTMUST00000124061.1";
mm10-chrY	HAVANA	gene	51063067	51066306	.	+	.	gene_id "ENSMUSG00000100915.6"; gene_type "lincRNA"; gene_name "Gm29321"; level 2; havana_gene "OTTMUSG00000048383.1";
mm10-chrY	HAVANA	transcript	51063067	51066306	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000186727.6"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124062.1";
mm10-chrY	HAVANA	exon	51063067	51063706	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000186727.6"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-201"; exon_number 1; exon_id "ENSMUSE00001331116.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124062.1";
mm10-chrY	HAVANA	exon	51064192	51064377	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000186727.6"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-201"; exon_number 2; exon_id "ENSMUSE00001322906.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124062.1";
mm10-chrY	HAVANA	exon	51065107	51065290	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000186727.6"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-201"; exon_number 3; exon_id "ENSMUSE00001330869.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124062.1";
mm10-chrY	HAVANA	exon	51065818	51066306	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000186727.6"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-201"; exon_number 4; exon_id "ENSMUSE00001324336.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124062.1";
mm10-chrY	HAVANA	transcript	51063520	51065886	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000188015.6"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124063.1";
mm10-chrY	HAVANA	exon	51063520	51063706	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000188015.6"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-202"; exon_number 1; exon_id "ENSMUSE00001328167.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124063.1";
mm10-chrY	HAVANA	exon	51064196	51064377	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000188015.6"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-202"; exon_number 2; exon_id "ENSMUSE00001322423.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124063.1";
mm10-chrY	HAVANA	exon	51065818	51065886	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000188015.6"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-202"; exon_number 3; exon_id "ENSMUSE00001324604.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124063.1";
mm10-chrY	HAVANA	transcript	51063520	51065886	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000188832.1"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124064.1";
mm10-chrY	HAVANA	exon	51063520	51063706	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000188832.1"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-203"; exon_number 1; exon_id "ENSMUSE00001328167.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124064.1";
mm10-chrY	HAVANA	exon	51064196	51064377	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000188832.1"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-203"; exon_number 2; exon_id "ENSMUSE00001322423.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124064.1";
mm10-chrY	HAVANA	exon	51065107	51065290	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000188832.1"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-203"; exon_number 3; exon_id "ENSMUSE00001330869.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124064.1";
mm10-chrY	HAVANA	exon	51065818	51065886	.	+	.	gene_id "ENSMUSG00000100915.6"; transcript_id "ENSMUST00000188832.1"; gene_type "lincRNA"; gene_name "Gm29321"; transcript_type "lincRNA"; transcript_name "Gm29321-203"; exon_number 4; exon_id "ENSMUSE00001324604.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048383.1"; havana_transcript "OTTMUST00000124064.1";
mm10-chrY	HAVANA	gene	51125220	51151484	.	+	.	gene_id "ENSMUSG00000096769.7"; gene_type "protein_coding"; gene_name "Gm21117"; level 2; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	HAVANA	transcript	51125220	51151484	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	exon	51125220	51125263	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 1; exon_id "ENSMUSE00001330547.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	exon	51126632	51126763	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 2; exon_id "ENSMUSE00001319600.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	CDS	51126646	51126763	.	+	0	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 2; exon_id "ENSMUSE00001319600.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	start_codon	51126646	51126648	.	+	0	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 2; exon_id "ENSMUSE00001319600.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	exon	51132101	51132167	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 3; exon_id "ENSMUSE00001055233.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	CDS	51132101	51132167	.	+	2	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 3; exon_id "ENSMUSE00001055233.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	exon	51132840	51132874	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 4; exon_id "ENSMUSE00001028532.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	CDS	51132840	51132874	.	+	1	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 4; exon_id "ENSMUSE00001028532.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	exon	51139899	51139965	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 5; exon_id "ENSMUSE00001059660.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	CDS	51139899	51139965	.	+	2	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 5; exon_id "ENSMUSE00001059660.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	exon	51140543	51140577	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 6; exon_id "ENSMUSE00001066125.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	CDS	51140543	51140577	.	+	1	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 6; exon_id "ENSMUSE00001066125.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	exon	51147765	51147882	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 7; exon_id "ENSMUSE00001029189.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	CDS	51147765	51147882	.	+	2	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 7; exon_id "ENSMUSE00001029189.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	exon	51148653	51148752	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 8; exon_id "ENSMUSE00001324483.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	CDS	51148653	51148752	.	+	1	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 8; exon_id "ENSMUSE00001324483.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	exon	51150799	51150897	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 9; exon_id "ENSMUSE00001319446.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	CDS	51150799	51150897	.	+	0	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 9; exon_id "ENSMUSE00001319446.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	exon	51151257	51151484	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 10; exon_id "ENSMUSE00001333374.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	CDS	51151257	51151283	.	+	0	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 10; exon_id "ENSMUSE00001333374.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	stop_codon	51151284	51151286	.	+	0	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 10; exon_id "ENSMUSE00001333374.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	UTR	51125220	51125263	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 1; exon_id "ENSMUSE00001330547.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	UTR	51126632	51126645	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 2; exon_id "ENSMUSE00001319600.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	HAVANA	UTR	51151284	51151484	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000185327.6"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-202"; exon_number 10; exon_id "ENSMUSE00001333374.1"; level 2; protein_id "ENSMUSP00000139807.1"; transcript_support_level "1"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048384.1"; havana_transcript "OTTMUST00000124065.1";
mm10-chrY	ENSEMBL	transcript	51126655	51148719	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	exon	51126655	51126763	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 1; exon_id "ENSMUSE00000980047.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	CDS	51126655	51126763	.	+	0	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 1; exon_id "ENSMUSE00000980047.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	start_codon	51126655	51126657	.	+	0	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 1; exon_id "ENSMUSE00000980047.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	exon	51132101	51132167	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 2; exon_id "ENSMUSE00001055233.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	CDS	51132101	51132167	.	+	2	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 2; exon_id "ENSMUSE00001055233.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	exon	51132840	51132874	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 3; exon_id "ENSMUSE00001028532.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	CDS	51132840	51132874	.	+	1	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 3; exon_id "ENSMUSE00001028532.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	exon	51139899	51139965	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 4; exon_id "ENSMUSE00001059660.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	CDS	51139899	51139965	.	+	2	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 4; exon_id "ENSMUSE00001059660.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	exon	51140543	51140577	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 5; exon_id "ENSMUSE00001066125.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	CDS	51140543	51140577	.	+	1	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 5; exon_id "ENSMUSE00001066125.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	exon	51147765	51147882	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 6; exon_id "ENSMUSE00001029189.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	CDS	51147765	51147882	.	+	2	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 6; exon_id "ENSMUSE00001029189.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	exon	51148653	51148719	.	+	.	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 7; exon_id "ENSMUSE00001050535.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	ENSEMBL	CDS	51148653	51148719	.	+	1	gene_id "ENSMUSG00000096769.7"; transcript_id "ENSMUST00000180133.1"; gene_type "protein_coding"; gene_name "Gm21117"; transcript_type "protein_coding"; transcript_name "Gm21117-201"; exon_number 7; exon_id "ENSMUSE00001050535.1"; level 3; protein_id "ENSMUSP00000136710.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048384.1";
mm10-chrY	HAVANA	gene	51212636	51213331	.	-	.	gene_id "ENSMUSG00000100365.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29319"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048385.1";
mm10-chrY	HAVANA	transcript	51212636	51213331	.	-	.	gene_id "ENSMUSG00000100365.1"; transcript_id "ENSMUST00000188060.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29319"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29319-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048385.1"; havana_transcript "OTTMUST00000124066.1";
mm10-chrY	HAVANA	exon	51212636	51213331	.	-	.	gene_id "ENSMUSG00000100365.1"; transcript_id "ENSMUST00000188060.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29319"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29319-201"; exon_number 1; exon_id "ENSMUSE00001318073.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048385.1"; havana_transcript "OTTMUST00000124066.1";
mm10-chrY	HAVANA	gene	51251272	51254613	.	-	.	gene_id "ENSMUSG00000099985.1"; gene_type "lincRNA"; gene_name "Gm28317"; level 2; havana_gene "OTTMUSG00000048411.1";
mm10-chrY	HAVANA	transcript	51251272	51254613	.	-	.	gene_id "ENSMUSG00000099985.1"; transcript_id "ENSMUST00000187200.1"; gene_type "lincRNA"; gene_name "Gm28317"; transcript_type "lincRNA"; transcript_name "Gm28317-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048411.1"; havana_transcript "OTTMUST00000124114.1";
mm10-chrY	HAVANA	exon	51254391	51254613	.	-	.	gene_id "ENSMUSG00000099985.1"; transcript_id "ENSMUST00000187200.1"; gene_type "lincRNA"; gene_name "Gm28317"; transcript_type "lincRNA"; transcript_name "Gm28317-201"; exon_number 1; exon_id "ENSMUSE00001320346.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048411.1"; havana_transcript "OTTMUST00000124114.1";
mm10-chrY	HAVANA	exon	51251272	51253214	.	-	.	gene_id "ENSMUSG00000099985.1"; transcript_id "ENSMUST00000187200.1"; gene_type "lincRNA"; gene_name "Gm28317"; transcript_type "lincRNA"; transcript_name "Gm28317-201"; exon_number 2; exon_id "ENSMUSE00001328170.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048411.1"; havana_transcript "OTTMUST00000124114.1";
mm10-chrY	HAVANA	gene	51280595	51283833	.	+	.	gene_id "ENSMUSG00000099916.6"; gene_type "lincRNA"; gene_name "Gm28318"; level 2; havana_gene "OTTMUSG00000048412.1";
mm10-chrY	HAVANA	transcript	51280595	51283833	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000190347.6"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124115.1";
mm10-chrY	HAVANA	exon	51280595	51281234	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000190347.6"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-203"; exon_number 1; exon_id "ENSMUSE00001318921.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124115.1";
mm10-chrY	HAVANA	exon	51281720	51281905	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000190347.6"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-203"; exon_number 2; exon_id "ENSMUSE00001324342.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124115.1";
mm10-chrY	HAVANA	exon	51282635	51282818	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000190347.6"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-203"; exon_number 3; exon_id "ENSMUSE00001331773.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124115.1";
mm10-chrY	HAVANA	exon	51283345	51283833	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000190347.6"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-203"; exon_number 4; exon_id "ENSMUSE00001334619.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124115.1";
mm10-chrY	HAVANA	transcript	51281048	51283413	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000189558.6"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124116.1";
mm10-chrY	HAVANA	exon	51281048	51281234	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000189558.6"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-202"; exon_number 1; exon_id "ENSMUSE00001330919.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124116.1";
mm10-chrY	HAVANA	exon	51281724	51281905	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000189558.6"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-202"; exon_number 2; exon_id "ENSMUSE00001324679.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124116.1";
mm10-chrY	HAVANA	exon	51282635	51282818	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000189558.6"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-202"; exon_number 3; exon_id "ENSMUSE00001331773.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124116.1";
mm10-chrY	HAVANA	exon	51283345	51283413	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000189558.6"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-202"; exon_number 4; exon_id "ENSMUSE00001330017.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124116.1";
mm10-chrY	HAVANA	transcript	51281048	51283413	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000187988.1"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124117.1";
mm10-chrY	HAVANA	exon	51281048	51281234	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000187988.1"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-201"; exon_number 1; exon_id "ENSMUSE00001330919.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124117.1";
mm10-chrY	HAVANA	exon	51281724	51281905	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000187988.1"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-201"; exon_number 2; exon_id "ENSMUSE00001324679.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124117.1";
mm10-chrY	HAVANA	exon	51283345	51283413	.	+	.	gene_id "ENSMUSG00000099916.6"; transcript_id "ENSMUST00000187988.1"; gene_type "lincRNA"; gene_name "Gm28318"; transcript_type "lincRNA"; transcript_name "Gm28318-201"; exon_number 3; exon_id "ENSMUSE00001330017.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048412.1"; havana_transcript "OTTMUST00000124117.1";
mm10-chrY	HAVANA	gene	51391153	51391845	.	-	.	gene_id "ENSMUSG00000101631.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20884"; level 2; havana_gene "OTTMUSG00000048413.1";
mm10-chrY	HAVANA	transcript	51391153	51391845	.	-	.	gene_id "ENSMUSG00000101631.1"; transcript_id "ENSMUST00000186946.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20884"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20884-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048413.1"; havana_transcript "OTTMUST00000124118.1";
mm10-chrY	HAVANA	exon	51391153	51391845	.	-	.	gene_id "ENSMUSG00000101631.1"; transcript_id "ENSMUST00000186946.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20884"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20884-201"; exon_number 1; exon_id "ENSMUSE00001330069.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048413.1"; havana_transcript "OTTMUST00000124118.1";
mm10-chrY	HAVANA	gene	51408969	51410551	.	+	.	gene_id "ENSMUSG00000099613.1"; gene_type "lincRNA"; gene_name "Gm28313"; level 2; havana_gene "OTTMUSG00000048414.1";
mm10-chrY	HAVANA	transcript	51408969	51410551	.	+	.	gene_id "ENSMUSG00000099613.1"; transcript_id "ENSMUST00000191411.1"; gene_type "lincRNA"; gene_name "Gm28313"; transcript_type "lincRNA"; transcript_name "Gm28313-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048414.1"; havana_transcript "OTTMUST00000124119.1";
mm10-chrY	HAVANA	exon	51408969	51409204	.	+	.	gene_id "ENSMUSG00000099613.1"; transcript_id "ENSMUST00000191411.1"; gene_type "lincRNA"; gene_name "Gm28313"; transcript_type "lincRNA"; transcript_name "Gm28313-201"; exon_number 1; exon_id "ENSMUSE00001323046.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048414.1"; havana_transcript "OTTMUST00000124119.1";
mm10-chrY	HAVANA	exon	51410391	51410551	.	+	.	gene_id "ENSMUSG00000099613.1"; transcript_id "ENSMUST00000191411.1"; gene_type "lincRNA"; gene_name "Gm28313"; transcript_type "lincRNA"; transcript_name "Gm28313-201"; exon_number 2; exon_id "ENSMUSE00001331290.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048414.1"; havana_transcript "OTTMUST00000124119.1";
mm10-chrY	HAVANA	gene	51421644	51421988	.	-	.	gene_id "ENSMUSG00000101557.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28314"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048415.1";
mm10-chrY	HAVANA	transcript	51421644	51421988	.	-	.	gene_id "ENSMUSG00000101557.1"; transcript_id "ENSMUST00000191276.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28314"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28314-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048415.1"; havana_transcript "OTTMUST00000124120.1";
mm10-chrY	HAVANA	exon	51421644	51421988	.	-	.	gene_id "ENSMUSG00000101557.1"; transcript_id "ENSMUST00000191276.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28314"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28314-201"; exon_number 1; exon_id "ENSMUSE00001330092.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048415.1"; havana_transcript "OTTMUST00000124120.1";
mm10-chrY	HAVANA	gene	51460090	51463433	.	-	.	gene_id "ENSMUSG00000101222.1"; gene_type "lincRNA"; gene_name "Gm28315"; level 2; havana_gene "OTTMUSG00000048416.1";
mm10-chrY	HAVANA	transcript	51460090	51463433	.	-	.	gene_id "ENSMUSG00000101222.1"; transcript_id "ENSMUST00000189948.1"; gene_type "lincRNA"; gene_name "Gm28315"; transcript_type "lincRNA"; transcript_name "Gm28315-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048416.1"; havana_transcript "OTTMUST00000124121.1";
mm10-chrY	HAVANA	exon	51463211	51463433	.	-	.	gene_id "ENSMUSG00000101222.1"; transcript_id "ENSMUST00000189948.1"; gene_type "lincRNA"; gene_name "Gm28315"; transcript_type "lincRNA"; transcript_name "Gm28315-201"; exon_number 1; exon_id "ENSMUSE00001334419.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048416.1"; havana_transcript "OTTMUST00000124121.1";
mm10-chrY	HAVANA	exon	51460090	51462034	.	-	.	gene_id "ENSMUSG00000101222.1"; transcript_id "ENSMUST00000189948.1"; gene_type "lincRNA"; gene_name "Gm28315"; transcript_type "lincRNA"; transcript_name "Gm28315-201"; exon_number 2; exon_id "ENSMUSE00001325905.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048416.1"; havana_transcript "OTTMUST00000124121.1";
mm10-chrY	HAVANA	gene	51495432	51498671	.	+	.	gene_id "ENSMUSG00000100787.6"; gene_type "lincRNA"; gene_name "Gm28316"; level 2; havana_gene "OTTMUSG00000048417.1";
mm10-chrY	HAVANA	transcript	51495432	51498671	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000187576.6"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124122.1";
mm10-chrY	HAVANA	exon	51495432	51496072	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000187576.6"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-201"; exon_number 1; exon_id "ENSMUSE00001319314.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124122.1";
mm10-chrY	HAVANA	exon	51496558	51496743	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000187576.6"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-201"; exon_number 2; exon_id "ENSMUSE00001327647.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124122.1";
mm10-chrY	HAVANA	exon	51497473	51497656	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000187576.6"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-201"; exon_number 3; exon_id "ENSMUSE00001323708.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124122.1";
mm10-chrY	HAVANA	exon	51498183	51498671	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000187576.6"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-201"; exon_number 4; exon_id "ENSMUSE00001322227.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124122.1";
mm10-chrY	HAVANA	transcript	51495887	51498247	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000188379.6"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124123.1";
mm10-chrY	HAVANA	exon	51495887	51496072	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000188379.6"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-202"; exon_number 1; exon_id "ENSMUSE00001329884.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124123.1";
mm10-chrY	HAVANA	exon	51496562	51496743	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000188379.6"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-202"; exon_number 2; exon_id "ENSMUSE00001334043.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124123.1";
mm10-chrY	HAVANA	exon	51497473	51497656	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000188379.6"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-202"; exon_number 3; exon_id "ENSMUSE00001323708.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124123.1";
mm10-chrY	HAVANA	exon	51498183	51498247	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000188379.6"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-202"; exon_number 4; exon_id "ENSMUSE00001325811.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124123.1";
mm10-chrY	HAVANA	transcript	51495887	51498247	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000188841.1"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124124.1";
mm10-chrY	HAVANA	exon	51495887	51496072	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000188841.1"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-203"; exon_number 1; exon_id "ENSMUSE00001329884.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124124.1";
mm10-chrY	HAVANA	exon	51496562	51496743	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000188841.1"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-203"; exon_number 2; exon_id "ENSMUSE00001334043.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124124.1";
mm10-chrY	HAVANA	exon	51498183	51498247	.	+	.	gene_id "ENSMUSG00000100787.6"; transcript_id "ENSMUST00000188841.1"; gene_type "lincRNA"; gene_name "Gm28316"; transcript_type "lincRNA"; transcript_name "Gm28316-203"; exon_number 3; exon_id "ENSMUSE00001325811.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048417.1"; havana_transcript "OTTMUST00000124124.1";
mm10-chrY	HAVANA	gene	51605796	51606491	.	-	.	gene_id "ENSMUSG00000100098.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21387"; level 2; havana_gene "OTTMUSG00000048418.1";
mm10-chrY	HAVANA	transcript	51605796	51606491	.	-	.	gene_id "ENSMUSG00000100098.1"; transcript_id "ENSMUST00000189705.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21387"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21387-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048418.1"; havana_transcript "OTTMUST00000124125.1";
mm10-chrY	HAVANA	exon	51605796	51606491	.	-	.	gene_id "ENSMUSG00000100098.1"; transcript_id "ENSMUST00000189705.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21387"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21387-201"; exon_number 1; exon_id "ENSMUSE00001328799.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048418.1"; havana_transcript "OTTMUST00000124125.1";
mm10-chrY	HAVANA	gene	51680531	51681223	.	-	.	gene_id "ENSMUSG00000099709.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21396"; level 2; havana_gene "OTTMUSG00000048419.1";
mm10-chrY	HAVANA	transcript	51680531	51681223	.	-	.	gene_id "ENSMUSG00000099709.1"; transcript_id "ENSMUST00000188391.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21396"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21396-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048419.1"; havana_transcript "OTTMUST00000124126.1";
mm10-chrY	HAVANA	exon	51680531	51681223	.	-	.	gene_id "ENSMUSG00000099709.1"; transcript_id "ENSMUST00000188391.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21396"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21396-201"; exon_number 1; exon_id "ENSMUSE00001332483.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048419.1"; havana_transcript "OTTMUST00000124126.1";
mm10-chrY	HAVANA	gene	51697441	51698982	.	+	.	gene_id "ENSMUSG00000101002.1"; gene_type "lincRNA"; gene_name "Gm28944"; level 2; havana_gene "OTTMUSG00000048420.1";
mm10-chrY	HAVANA	transcript	51697441	51698982	.	+	.	gene_id "ENSMUSG00000101002.1"; transcript_id "ENSMUST00000188946.1"; gene_type "lincRNA"; gene_name "Gm28944"; transcript_type "lincRNA"; transcript_name "Gm28944-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048420.1"; havana_transcript "OTTMUST00000124127.1";
mm10-chrY	HAVANA	exon	51697441	51697658	.	+	.	gene_id "ENSMUSG00000101002.1"; transcript_id "ENSMUST00000188946.1"; gene_type "lincRNA"; gene_name "Gm28944"; transcript_type "lincRNA"; transcript_name "Gm28944-201"; exon_number 1; exon_id "ENSMUSE00001332941.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048420.1"; havana_transcript "OTTMUST00000124127.1";
mm10-chrY	HAVANA	exon	51698845	51698982	.	+	.	gene_id "ENSMUSG00000101002.1"; transcript_id "ENSMUST00000188946.1"; gene_type "lincRNA"; gene_name "Gm28944"; transcript_type "lincRNA"; transcript_name "Gm28944-201"; exon_number 2; exon_id "ENSMUSE00001320152.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048420.1"; havana_transcript "OTTMUST00000124127.1";
mm10-chrY	HAVANA	gene	51710098	51710712	.	-	.	gene_id "ENSMUSG00000101019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28943"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048421.1";
mm10-chrY	HAVANA	transcript	51710098	51710712	.	-	.	gene_id "ENSMUSG00000101019.1"; transcript_id "ENSMUST00000186187.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28943"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28943-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048421.1"; havana_transcript "OTTMUST00000124128.1";
mm10-chrY	HAVANA	exon	51710098	51710712	.	-	.	gene_id "ENSMUSG00000101019.1"; transcript_id "ENSMUST00000186187.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28943"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28943-201"; exon_number 1; exon_id "ENSMUSE00001325069.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048421.1"; havana_transcript "OTTMUST00000124128.1";
mm10-chrY	HAVANA	gene	51747028	51747723	.	-	.	gene_id "ENSMUSG00000101684.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28946"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048422.1";
mm10-chrY	HAVANA	transcript	51747028	51747723	.	-	.	gene_id "ENSMUSG00000101684.1"; transcript_id "ENSMUST00000191176.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28946"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28946-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048422.1"; havana_transcript "OTTMUST00000124129.1";
mm10-chrY	HAVANA	exon	51747028	51747723	.	-	.	gene_id "ENSMUSG00000101684.1"; transcript_id "ENSMUST00000191176.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28946"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28946-201"; exon_number 1; exon_id "ENSMUSE00001332958.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048422.1"; havana_transcript "OTTMUST00000124129.1";
mm10-chrY	HAVANA	gene	51753580	51756918	.	-	.	gene_id "ENSMUSG00000100820.1"; gene_type "lincRNA"; gene_name "Gm28945"; level 2; havana_gene "OTTMUSG00000048423.1";
mm10-chrY	HAVANA	transcript	51753580	51756918	.	-	.	gene_id "ENSMUSG00000100820.1"; transcript_id "ENSMUST00000187780.1"; gene_type "lincRNA"; gene_name "Gm28945"; transcript_type "lincRNA"; transcript_name "Gm28945-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048423.1"; havana_transcript "OTTMUST00000124130.1";
mm10-chrY	HAVANA	exon	51756696	51756918	.	-	.	gene_id "ENSMUSG00000100820.1"; transcript_id "ENSMUST00000187780.1"; gene_type "lincRNA"; gene_name "Gm28945"; transcript_type "lincRNA"; transcript_name "Gm28945-201"; exon_number 1; exon_id "ENSMUSE00001329671.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048423.1"; havana_transcript "OTTMUST00000124130.1";
mm10-chrY	HAVANA	exon	51753580	51755521	.	-	.	gene_id "ENSMUSG00000100820.1"; transcript_id "ENSMUST00000187780.1"; gene_type "lincRNA"; gene_name "Gm28945"; transcript_type "lincRNA"; transcript_name "Gm28945-201"; exon_number 2; exon_id "ENSMUSE00001329987.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048423.1"; havana_transcript "OTTMUST00000124130.1";
mm10-chrY	HAVANA	gene	51790006	51793245	.	+	.	gene_id "ENSMUSG00000100232.6"; gene_type "lincRNA"; gene_name "Gm28947"; level 2; havana_gene "OTTMUSG00000048424.1";
mm10-chrY	HAVANA	transcript	51790006	51793245	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188701.6"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124131.1";
mm10-chrY	HAVANA	exon	51790006	51790645	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188701.6"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-203"; exon_number 1; exon_id "ENSMUSE00001324202.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124131.1";
mm10-chrY	HAVANA	exon	51791131	51791316	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188701.6"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-203"; exon_number 2; exon_id "ENSMUSE00001326595.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124131.1";
mm10-chrY	HAVANA	exon	51792046	51792229	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188701.6"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-203"; exon_number 3; exon_id "ENSMUSE00001319557.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124131.1";
mm10-chrY	HAVANA	exon	51792757	51793245	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188701.6"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-203"; exon_number 4; exon_id "ENSMUSE00001321468.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124131.1";
mm10-chrY	HAVANA	transcript	51790459	51792825	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188627.6"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124132.1";
mm10-chrY	HAVANA	exon	51790459	51790645	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188627.6"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-202"; exon_number 1; exon_id "ENSMUSE00001333443.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124132.1";
mm10-chrY	HAVANA	exon	51791135	51791316	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188627.6"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-202"; exon_number 2; exon_id "ENSMUSE00001332976.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124132.1";
mm10-chrY	HAVANA	exon	51792046	51792229	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188627.6"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-202"; exon_number 3; exon_id "ENSMUSE00001319557.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124132.1";
mm10-chrY	HAVANA	exon	51792757	51792825	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188627.6"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-202"; exon_number 4; exon_id "ENSMUSE00001318496.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124132.1";
mm10-chrY	HAVANA	transcript	51790459	51792825	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188506.1"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124133.1";
mm10-chrY	HAVANA	exon	51790459	51790645	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188506.1"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-201"; exon_number 1; exon_id "ENSMUSE00001333443.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124133.1";
mm10-chrY	HAVANA	exon	51791135	51791316	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188506.1"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-201"; exon_number 2; exon_id "ENSMUSE00001332976.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124133.1";
mm10-chrY	HAVANA	exon	51792757	51792825	.	+	.	gene_id "ENSMUSG00000100232.6"; transcript_id "ENSMUST00000188506.1"; gene_type "lincRNA"; gene_name "Gm28947"; transcript_type "lincRNA"; transcript_name "Gm28947-201"; exon_number 3; exon_id "ENSMUSE00001318496.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048424.1"; havana_transcript "OTTMUST00000124133.1";
mm10-chrY	HAVANA	gene	51852120	51878300	.	+	.	gene_id "ENSMUSG00000100485.1"; gene_type "protein_coding"; gene_name "Gm20920"; level 2; havana_gene "OTTMUSG00000048425.1";
mm10-chrY	HAVANA	transcript	51852120	51878300	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	exon	51852120	51852163	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 1; exon_id "ENSMUSE00001325719.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	exon	51853530	51853661	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 2; exon_id "ENSMUSE00001323651.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	CDS	51853544	51853661	.	+	0	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 2; exon_id "ENSMUSE00001323651.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	start_codon	51853544	51853546	.	+	0	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 2; exon_id "ENSMUSE00001323651.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	exon	51859001	51859067	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 3; exon_id "ENSMUSE00001329557.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	CDS	51859001	51859067	.	+	2	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 3; exon_id "ENSMUSE00001329557.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	exon	51859712	51859746	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 4; exon_id "ENSMUSE00001331553.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	CDS	51859712	51859746	.	+	1	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 4; exon_id "ENSMUSE00001331553.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	exon	51866746	51866812	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 5; exon_id "ENSMUSE00001331846.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	CDS	51866746	51866812	.	+	2	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 5; exon_id "ENSMUSE00001331846.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	exon	51867386	51867420	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 6; exon_id "ENSMUSE00001330024.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	CDS	51867386	51867420	.	+	1	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 6; exon_id "ENSMUSE00001330024.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	exon	51874572	51874689	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 7; exon_id "ENSMUSE00001335307.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	CDS	51874572	51874689	.	+	2	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 7; exon_id "ENSMUSE00001335307.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	exon	51875482	51875581	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 8; exon_id "ENSMUSE00001333531.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	CDS	51875482	51875581	.	+	1	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 8; exon_id "ENSMUSE00001333531.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	exon	51877618	51877716	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 9; exon_id "ENSMUSE00001330778.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	CDS	51877618	51877716	.	+	0	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 9; exon_id "ENSMUSE00001330778.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	exon	51878076	51878300	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 10; exon_id "ENSMUSE00001326504.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	CDS	51878076	51878102	.	+	0	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 10; exon_id "ENSMUSE00001326504.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	stop_codon	51878103	51878105	.	+	0	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 10; exon_id "ENSMUSE00001326504.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	UTR	51852120	51852163	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 1; exon_id "ENSMUSE00001325719.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	UTR	51853530	51853543	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 2; exon_id "ENSMUSE00001323651.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	UTR	51878103	51878300	.	+	.	gene_id "ENSMUSG00000100485.1"; transcript_id "ENSMUST00000187477.1"; gene_type "protein_coding"; gene_name "Gm20920"; transcript_type "protein_coding"; transcript_name "Gm20920-201"; exon_number 10; exon_id "ENSMUSE00001326504.1"; level 2; protein_id "ENSMUSP00000140677.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048425.1"; havana_transcript "OTTMUST00000124134.1";
mm10-chrY	HAVANA	gene	51939678	51940373	.	-	.	gene_id "ENSMUSG00000100947.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28949"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048426.1";
mm10-chrY	HAVANA	transcript	51939678	51940373	.	-	.	gene_id "ENSMUSG00000100947.1"; transcript_id "ENSMUST00000187805.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28949"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28949-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048426.1"; havana_transcript "OTTMUST00000124135.1";
mm10-chrY	HAVANA	exon	51939678	51940373	.	-	.	gene_id "ENSMUSG00000100947.1"; transcript_id "ENSMUST00000187805.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28949"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28949-201"; exon_number 1; exon_id "ENSMUSE00001326875.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048426.1"; havana_transcript "OTTMUST00000124135.1";
mm10-chrY	HAVANA	gene	51978428	51981771	.	-	.	gene_id "ENSMUSG00000100461.1"; gene_type "lincRNA"; gene_name "Gm28948"; level 2; havana_gene "OTTMUSG00000048427.1";
mm10-chrY	HAVANA	transcript	51978428	51981771	.	-	.	gene_id "ENSMUSG00000100461.1"; transcript_id "ENSMUST00000188447.1"; gene_type "lincRNA"; gene_name "Gm28948"; transcript_type "lincRNA"; transcript_name "Gm28948-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048427.1"; havana_transcript "OTTMUST00000124136.1";
mm10-chrY	HAVANA	exon	51981549	51981771	.	-	.	gene_id "ENSMUSG00000100461.1"; transcript_id "ENSMUST00000188447.1"; gene_type "lincRNA"; gene_name "Gm28948"; transcript_type "lincRNA"; transcript_name "Gm28948-201"; exon_number 1; exon_id "ENSMUSE00001322819.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048427.1"; havana_transcript "OTTMUST00000124136.1";
mm10-chrY	HAVANA	exon	51978428	51980371	.	-	.	gene_id "ENSMUSG00000100461.1"; transcript_id "ENSMUST00000188447.1"; gene_type "lincRNA"; gene_name "Gm28948"; transcript_type "lincRNA"; transcript_name "Gm28948-201"; exon_number 2; exon_id "ENSMUSE00001318564.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048427.1"; havana_transcript "OTTMUST00000124136.1";
mm10-chrY	HAVANA	gene	52013770	52017009	.	+	.	gene_id "ENSMUSG00000100248.6"; gene_type "lincRNA"; gene_name "Gm28950"; level 2; havana_gene "OTTMUSG00000048428.1";
mm10-chrY	HAVANA	transcript	52013770	52017009	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000188826.6"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124137.1";
mm10-chrY	HAVANA	exon	52013770	52014409	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000188826.6"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-203"; exon_number 1; exon_id "ENSMUSE00001325461.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124137.1";
mm10-chrY	HAVANA	exon	52014895	52015080	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000188826.6"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-203"; exon_number 2; exon_id "ENSMUSE00001330063.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124137.1";
mm10-chrY	HAVANA	exon	52015810	52015993	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000188826.6"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-203"; exon_number 3; exon_id "ENSMUSE00001320185.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124137.1";
mm10-chrY	HAVANA	exon	52016520	52017009	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000188826.6"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-203"; exon_number 4; exon_id "ENSMUSE00001333481.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124137.1";
mm10-chrY	HAVANA	transcript	52014223	52016584	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000185250.6"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124138.1";
mm10-chrY	HAVANA	exon	52014223	52014409	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000185250.6"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-201"; exon_number 1; exon_id "ENSMUSE00001326851.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124138.1";
mm10-chrY	HAVANA	exon	52014899	52015080	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000185250.6"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-201"; exon_number 2; exon_id "ENSMUSE00001326139.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124138.1";
mm10-chrY	HAVANA	exon	52016520	52016584	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000185250.6"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-201"; exon_number 3; exon_id "ENSMUSE00001321986.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124138.1";
mm10-chrY	HAVANA	transcript	52014223	52016584	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000185765.1"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-202"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124139.1";
mm10-chrY	HAVANA	exon	52014223	52014409	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000185765.1"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-202"; exon_number 1; exon_id "ENSMUSE00001326851.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124139.1";
mm10-chrY	HAVANA	exon	52014899	52015080	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000185765.1"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-202"; exon_number 2; exon_id "ENSMUSE00001326139.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124139.1";
mm10-chrY	HAVANA	exon	52015810	52015993	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000185765.1"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-202"; exon_number 3; exon_id "ENSMUSE00001320185.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124139.1";
mm10-chrY	HAVANA	exon	52016520	52016584	.	+	.	gene_id "ENSMUSG00000100248.6"; transcript_id "ENSMUST00000185765.1"; gene_type "lincRNA"; gene_name "Gm28950"; transcript_type "lincRNA"; transcript_name "Gm28950-202"; exon_number 4; exon_id "ENSMUSE00001321986.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000048428.1"; havana_transcript "OTTMUST00000124139.1";
mm10-chrY	HAVANA	gene	52261931	52262626	.	-	.	gene_id "ENSMUSG00000101623.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21245"; level 2; havana_gene "OTTMUSG00000048452.1";
mm10-chrY	HAVANA	transcript	52261931	52262626	.	-	.	gene_id "ENSMUSG00000101623.1"; transcript_id "ENSMUST00000190467.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21245"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21245-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048452.1"; havana_transcript "OTTMUST00000124199.1";
mm10-chrY	HAVANA	exon	52261931	52262626	.	-	.	gene_id "ENSMUSG00000101623.1"; transcript_id "ENSMUST00000190467.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21245"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21245-201"; exon_number 1; exon_id "ENSMUSE00001324437.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048452.1"; havana_transcript "OTTMUST00000124199.1";
mm10-chrY	HAVANA	gene	52291526	52292140	.	-	.	gene_id "ENSMUSG00000100996.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29169"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048453.1";
mm10-chrY	HAVANA	transcript	52291526	52292140	.	-	.	gene_id "ENSMUSG00000100996.1"; transcript_id "ENSMUST00000189835.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29169"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29169-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048453.1"; havana_transcript "OTTMUST00000124200.1";
mm10-chrY	HAVANA	exon	52291526	52292140	.	-	.	gene_id "ENSMUSG00000100996.1"; transcript_id "ENSMUST00000189835.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29169"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29169-201"; exon_number 1; exon_id "ENSMUSE00001323488.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048453.1"; havana_transcript "OTTMUST00000124200.1";
mm10-chrY	HAVANA	gene	52328335	52329030	.	-	.	gene_id "ENSMUSG00000101515.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21899"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048454.1";
mm10-chrY	HAVANA	transcript	52328335	52329030	.	-	.	gene_id "ENSMUSG00000101515.1"; transcript_id "ENSMUST00000190745.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21899"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21899-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048454.1"; havana_transcript "OTTMUST00000124201.1";
mm10-chrY	HAVANA	exon	52328335	52329030	.	-	.	gene_id "ENSMUSG00000101515.1"; transcript_id "ENSMUST00000190745.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21899"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21899-201"; exon_number 1; exon_id "ENSMUSE00001321191.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048454.1"; havana_transcript "OTTMUST00000124201.1";
mm10-chrY	HAVANA	gene	52342720	52346062	.	+	.	gene_id "ENSMUSG00000099559.1"; gene_type "lincRNA"; gene_name "Gm29063"; level 2; havana_gene "OTTMUSG00000048469.1";
mm10-chrY	HAVANA	transcript	52342720	52346062	.	+	.	gene_id "ENSMUSG00000099559.1"; transcript_id "ENSMUST00000190236.1"; gene_type "lincRNA"; gene_name "Gm29063"; transcript_type "lincRNA"; transcript_name "Gm29063-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048469.1"; havana_transcript "OTTMUST00000124229.1";
mm10-chrY	HAVANA	exon	52342720	52342942	.	+	.	gene_id "ENSMUSG00000099559.1"; transcript_id "ENSMUST00000190236.1"; gene_type "lincRNA"; gene_name "Gm29063"; transcript_type "lincRNA"; transcript_name "Gm29063-201"; exon_number 1; exon_id "ENSMUSE00001318636.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048469.1"; havana_transcript "OTTMUST00000124229.1";
mm10-chrY	HAVANA	exon	52344120	52346062	.	+	.	gene_id "ENSMUSG00000099559.1"; transcript_id "ENSMUST00000190236.1"; gene_type "lincRNA"; gene_name "Gm29063"; transcript_type "lincRNA"; transcript_name "Gm29063-201"; exon_number 2; exon_id "ENSMUSE00001335345.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048469.1"; havana_transcript "OTTMUST00000124229.1";
mm10-chrY	HAVANA	gene	52347472	52347786	.	+	.	gene_id "ENSMUSG00000099637.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28737"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048470.1";
mm10-chrY	HAVANA	transcript	52347472	52347786	.	+	.	gene_id "ENSMUSG00000099637.1"; transcript_id "ENSMUST00000186808.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28737-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048470.1"; havana_transcript "OTTMUST00000124230.1";
mm10-chrY	HAVANA	exon	52347472	52347786	.	+	.	gene_id "ENSMUSG00000099637.1"; transcript_id "ENSMUST00000186808.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28737"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28737-201"; exon_number 1; exon_id "ENSMUSE00001321610.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048470.1"; havana_transcript "OTTMUST00000124230.1";
mm10-chrY	HAVANA	gene	52383999	52384694	.	+	.	gene_id "ENSMUSG00000099565.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28738"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048471.1";
mm10-chrY	HAVANA	transcript	52383999	52384694	.	+	.	gene_id "ENSMUSG00000099565.1"; transcript_id "ENSMUST00000187480.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28738"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28738-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048471.1"; havana_transcript "OTTMUST00000124231.1";
mm10-chrY	HAVANA	exon	52383999	52384694	.	+	.	gene_id "ENSMUSG00000099565.1"; transcript_id "ENSMUST00000187480.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28738"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28738-201"; exon_number 1; exon_id "ENSMUSE00001332725.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048471.1"; havana_transcript "OTTMUST00000124231.1";
mm10-chrY	HAVANA	gene	52456738	52470686	.	-	.	gene_id "ENSMUSG00000100343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20923"; level 2; havana_gene "OTTMUSG00000048455.1";
mm10-chrY	HAVANA	transcript	52456738	52470686	.	-	.	gene_id "ENSMUSG00000100343.1"; transcript_id "ENSMUST00000190009.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20923"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20923-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048455.1"; havana_transcript "OTTMUST00000124202.1";
mm10-chrY	HAVANA	exon	52470569	52470686	.	-	.	gene_id "ENSMUSG00000100343.1"; transcript_id "ENSMUST00000190009.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20923"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20923-201"; exon_number 1; exon_id "ENSMUSE00000989377.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048455.1"; havana_transcript "OTTMUST00000124202.1";
mm10-chrY	HAVANA	exon	52465165	52465231	.	-	.	gene_id "ENSMUSG00000100343.1"; transcript_id "ENSMUST00000190009.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20923"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20923-201"; exon_number 2; exon_id "ENSMUSE00000975157.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048455.1"; havana_transcript "OTTMUST00000124202.1";
mm10-chrY	HAVANA	exon	52464458	52464492	.	-	.	gene_id "ENSMUSG00000100343.1"; transcript_id "ENSMUST00000190009.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20923"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20923-201"; exon_number 3; exon_id "ENSMUSE00001076522.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048455.1"; havana_transcript "OTTMUST00000124202.1";
mm10-chrY	HAVANA	exon	52457349	52457415	.	-	.	gene_id "ENSMUSG00000100343.1"; transcript_id "ENSMUST00000190009.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20923"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20923-201"; exon_number 4; exon_id "ENSMUSE00001322185.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048455.1"; havana_transcript "OTTMUST00000124202.1";
mm10-chrY	HAVANA	exon	52456738	52456769	.	-	.	gene_id "ENSMUSG00000100343.1"; transcript_id "ENSMUST00000190009.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20923"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20923-201"; exon_number 5; exon_id "ENSMUSE00001327761.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048455.1"; havana_transcript "OTTMUST00000124202.1";
mm10-chrY	HAVANA	gene	52497006	52500244	.	+	.	gene_id "ENSMUSG00000099494.6"; gene_type "lincRNA"; gene_name "Gm28197"; level 2; havana_gene "OTTMUSG00000048456.1";
mm10-chrY	HAVANA	transcript	52497006	52500244	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000188434.6"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124203.1";
mm10-chrY	HAVANA	exon	52497006	52497645	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000188434.6"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-203"; exon_number 1; exon_id "ENSMUSE00001319308.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124203.1";
mm10-chrY	HAVANA	exon	52498131	52498316	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000188434.6"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-203"; exon_number 2; exon_id "ENSMUSE00001321319.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124203.1";
mm10-chrY	HAVANA	exon	52499046	52499229	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000188434.6"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-203"; exon_number 3; exon_id "ENSMUSE00001328684.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124203.1";
mm10-chrY	HAVANA	exon	52499756	52500244	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000188434.6"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-203"; exon_number 4; exon_id "ENSMUSE00001322895.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124203.1";
mm10-chrY	HAVANA	transcript	52497459	52499824	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000185774.6"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124204.1";
mm10-chrY	HAVANA	exon	52497459	52497645	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000185774.6"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-201"; exon_number 1; exon_id "ENSMUSE00001326345.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124204.1";
mm10-chrY	HAVANA	exon	52498135	52498316	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000185774.6"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-201"; exon_number 2; exon_id "ENSMUSE00001330331.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124204.1";
mm10-chrY	HAVANA	exon	52499756	52499824	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000185774.6"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-201"; exon_number 3; exon_id "ENSMUSE00001328532.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124204.1";
mm10-chrY	HAVANA	transcript	52497459	52499824	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000188364.1"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124205.1";
mm10-chrY	HAVANA	exon	52497459	52497645	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000188364.1"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-202"; exon_number 1; exon_id "ENSMUSE00001326345.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124205.1";
mm10-chrY	HAVANA	exon	52498135	52498316	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000188364.1"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-202"; exon_number 2; exon_id "ENSMUSE00001330331.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124205.1";
mm10-chrY	HAVANA	exon	52499046	52499229	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000188364.1"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-202"; exon_number 3; exon_id "ENSMUSE00001328684.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124205.1";
mm10-chrY	HAVANA	exon	52499756	52499824	.	+	.	gene_id "ENSMUSG00000099494.6"; transcript_id "ENSMUST00000188364.1"; gene_type "lincRNA"; gene_name "Gm28197"; transcript_type "lincRNA"; transcript_name "Gm28197-202"; exon_number 4; exon_id "ENSMUSE00001328532.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048456.1"; havana_transcript "OTTMUST00000124205.1";
mm10-chrY	HAVANA	gene	52607626	52608321	.	-	.	gene_id "ENSMUSG00000102044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21249"; level 2; havana_gene "OTTMUSG00000048472.1";
mm10-chrY	HAVANA	transcript	52607626	52608321	.	-	.	gene_id "ENSMUSG00000102044.1"; transcript_id "ENSMUST00000187380.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21249"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21249-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048472.1"; havana_transcript "OTTMUST00000124232.1";
mm10-chrY	HAVANA	exon	52607626	52608321	.	-	.	gene_id "ENSMUSG00000102044.1"; transcript_id "ENSMUST00000187380.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21249"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21249-201"; exon_number 1; exon_id "ENSMUSE00001322471.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048472.1"; havana_transcript "OTTMUST00000124232.1";
mm10-chrY	HAVANA	gene	52638196	52638810	.	-	.	gene_id "ENSMUSG00000099745.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28736"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048473.1";
mm10-chrY	HAVANA	transcript	52638196	52638810	.	-	.	gene_id "ENSMUSG00000099745.1"; transcript_id "ENSMUST00000186257.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28736"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28736-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048473.1"; havana_transcript "OTTMUST00000124233.1";
mm10-chrY	HAVANA	exon	52638196	52638810	.	-	.	gene_id "ENSMUSG00000099745.1"; transcript_id "ENSMUST00000186257.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28736"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28736-201"; exon_number 1; exon_id "ENSMUSE00001335387.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048473.1"; havana_transcript "OTTMUST00000124233.1";
mm10-chrY	HAVANA	gene	52674918	52675613	.	-	.	gene_id "ENSMUSG00000101883.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21840"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048474.1";
mm10-chrY	HAVANA	transcript	52674918	52675613	.	-	.	gene_id "ENSMUSG00000101883.1"; transcript_id "ENSMUST00000187212.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21840"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21840-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048474.1"; havana_transcript "OTTMUST00000124234.1";
mm10-chrY	HAVANA	exon	52674918	52675613	.	-	.	gene_id "ENSMUSG00000101883.1"; transcript_id "ENSMUST00000187212.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21840"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21840-201"; exon_number 1; exon_id "ENSMUSE00001326194.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048474.1"; havana_transcript "OTTMUST00000124234.1";
mm10-chrY	HAVANA	gene	52717904	52721143	.	+	.	gene_id "ENSMUSG00000102022.6"; gene_type "lincRNA"; gene_name "Gm28735"; level 2; havana_gene "OTTMUSG00000048475.1";
mm10-chrY	HAVANA	transcript	52717904	52721143	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000188159.6"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124235.1";
mm10-chrY	HAVANA	exon	52717904	52718543	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000188159.6"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-202"; exon_number 1; exon_id "ENSMUSE00001318219.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124235.1";
mm10-chrY	HAVANA	exon	52719029	52719214	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000188159.6"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-202"; exon_number 2; exon_id "ENSMUSE00001321814.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124235.1";
mm10-chrY	HAVANA	exon	52719944	52720127	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000188159.6"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-202"; exon_number 3; exon_id "ENSMUSE00001330280.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124235.1";
mm10-chrY	HAVANA	exon	52720655	52721143	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000188159.6"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-202"; exon_number 4; exon_id "ENSMUSE00001330509.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124235.1";
mm10-chrY	HAVANA	transcript	52718357	52720723	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000188542.6"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124236.1";
mm10-chrY	HAVANA	exon	52718357	52718543	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000188542.6"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-203"; exon_number 1; exon_id "ENSMUSE00001322841.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124236.1";
mm10-chrY	HAVANA	exon	52719033	52719214	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000188542.6"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-203"; exon_number 2; exon_id "ENSMUSE00001331738.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124236.1";
mm10-chrY	HAVANA	exon	52719944	52720127	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000188542.6"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-203"; exon_number 3; exon_id "ENSMUSE00001330280.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124236.1";
mm10-chrY	HAVANA	exon	52720655	52720723	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000188542.6"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-203"; exon_number 4; exon_id "ENSMUSE00001329857.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124236.1";
mm10-chrY	HAVANA	transcript	52718357	52720723	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000187122.1"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124237.1";
mm10-chrY	HAVANA	exon	52718357	52718543	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000187122.1"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-201"; exon_number 1; exon_id "ENSMUSE00001322841.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124237.1";
mm10-chrY	HAVANA	exon	52719033	52719214	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000187122.1"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-201"; exon_number 2; exon_id "ENSMUSE00001331738.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124237.1";
mm10-chrY	HAVANA	exon	52720655	52720723	.	+	.	gene_id "ENSMUSG00000102022.6"; transcript_id "ENSMUST00000187122.1"; gene_type "lincRNA"; gene_name "Gm28735"; transcript_type "lincRNA"; transcript_name "Gm28735-201"; exon_number 3; exon_id "ENSMUSE00001329857.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048475.1"; havana_transcript "OTTMUST00000124237.1";
mm10-chrY	HAVANA	gene	52780040	52806254	.	+	.	gene_id "ENSMUSG00000095606.7"; gene_type "protein_coding"; gene_name "Gm21258"; level 2; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	HAVANA	transcript	52780040	52806254	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	exon	52780040	52780083	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 1; exon_id "ENSMUSE00001329960.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	exon	52781448	52781579	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 2; exon_id "ENSMUSE00001327236.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	CDS	52781462	52781579	.	+	0	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 2; exon_id "ENSMUSE00001327236.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	start_codon	52781462	52781464	.	+	0	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 2; exon_id "ENSMUSE00001327236.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	exon	52786908	52786974	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 3; exon_id "ENSMUSE00001076164.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	CDS	52786908	52786974	.	+	2	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 3; exon_id "ENSMUSE00001076164.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	exon	52787652	52787686	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 4; exon_id "ENSMUSE00001013476.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	CDS	52787652	52787686	.	+	1	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 4; exon_id "ENSMUSE00001013476.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	exon	52794683	52794749	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 5; exon_id "ENSMUSE00001333475.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	CDS	52794683	52794749	.	+	2	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 5; exon_id "ENSMUSE00001333475.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	exon	52795328	52795362	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 6; exon_id "ENSMUSE00001327907.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	CDS	52795328	52795362	.	+	1	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 6; exon_id "ENSMUSE00001327907.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	exon	52802531	52802648	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 7; exon_id "ENSMUSE00001074310.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	CDS	52802531	52802648	.	+	2	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 7; exon_id "ENSMUSE00001074310.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	exon	52803429	52803528	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 8; exon_id "ENSMUSE00001070229.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	CDS	52803429	52803528	.	+	1	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 8; exon_id "ENSMUSE00001070229.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	exon	52805571	52805669	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 9; exon_id "ENSMUSE00001031570.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	CDS	52805571	52805669	.	+	0	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 9; exon_id "ENSMUSE00001031570.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	exon	52806029	52806254	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 10; exon_id "ENSMUSE00001326078.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	CDS	52806029	52806055	.	+	0	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 10; exon_id "ENSMUSE00001326078.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	stop_codon	52806056	52806058	.	+	0	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 10; exon_id "ENSMUSE00001326078.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	UTR	52780040	52780083	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 1; exon_id "ENSMUSE00001329960.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	UTR	52781448	52781461	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 2; exon_id "ENSMUSE00001327236.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	HAVANA	UTR	52806056	52806254	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000191553.6"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-202"; exon_number 10; exon_id "ENSMUSE00001326078.1"; level 2; protein_id "ENSMUSP00000139882.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048476.1"; havana_transcript "OTTMUST00000124238.1";
mm10-chrY	ENSEMBL	transcript	52781462	52806058	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	exon	52781462	52781579	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 1; exon_id "ENSMUSE00001088857.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	CDS	52781462	52781579	.	+	0	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 1; exon_id "ENSMUSE00001088857.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	start_codon	52781462	52781464	.	+	0	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 1; exon_id "ENSMUSE00001088857.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	exon	52786908	52786974	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 2; exon_id "ENSMUSE00001076164.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	CDS	52786908	52786974	.	+	2	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 2; exon_id "ENSMUSE00001076164.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	exon	52787652	52787686	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 3; exon_id "ENSMUSE00001013476.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	CDS	52787652	52787686	.	+	1	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 3; exon_id "ENSMUSE00001013476.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	exon	52802531	52802648	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 4; exon_id "ENSMUSE00001074310.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	CDS	52802531	52802648	.	+	2	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 4; exon_id "ENSMUSE00001074310.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	exon	52803429	52803528	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 5; exon_id "ENSMUSE00001070229.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	CDS	52803429	52803528	.	+	1	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 5; exon_id "ENSMUSE00001070229.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	exon	52805571	52805669	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 6; exon_id "ENSMUSE00001031570.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	CDS	52805571	52805669	.	+	0	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 6; exon_id "ENSMUSE00001031570.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	exon	52806029	52806058	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 7; exon_id "ENSMUSE00000978531.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	CDS	52806029	52806055	.	+	0	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 7; exon_id "ENSMUSE00000978531.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	stop_codon	52806056	52806058	.	+	0	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 7; exon_id "ENSMUSE00000978531.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	ENSEMBL	UTR	52806056	52806058	.	+	.	gene_id "ENSMUSG00000095606.7"; transcript_id "ENSMUST00000178673.1"; gene_type "protein_coding"; gene_name "Gm21258"; transcript_type "protein_coding"; transcript_name "Gm21258-201"; exon_number 7; exon_id "ENSMUSE00000978531.1"; level 3; protein_id "ENSMUSP00000136718.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048476.1";
mm10-chrY	HAVANA	gene	52866444	52867139	.	-	.	gene_id "ENSMUSG00000099725.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28734"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048477.1";
mm10-chrY	HAVANA	transcript	52866444	52867139	.	-	.	gene_id "ENSMUSG00000099725.1"; transcript_id "ENSMUST00000188104.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28734"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28734-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048477.1"; havana_transcript "OTTMUST00000124239.1";
mm10-chrY	HAVANA	exon	52866444	52867139	.	-	.	gene_id "ENSMUSG00000099725.1"; transcript_id "ENSMUST00000188104.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28734"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28734-201"; exon_number 1; exon_id "ENSMUSE00001327579.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048477.1"; havana_transcript "OTTMUST00000124239.1";
mm10-chrY	HAVANA	gene	52903435	52903749	.	-	.	gene_id "ENSMUSG00000100853.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28232"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048510.1";
mm10-chrY	HAVANA	transcript	52903435	52903749	.	-	.	gene_id "ENSMUSG00000100853.1"; transcript_id "ENSMUST00000188683.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28232"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28232-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048510.1"; havana_transcript "OTTMUST00000124329.1";
mm10-chrY	HAVANA	exon	52903435	52903749	.	-	.	gene_id "ENSMUSG00000100853.1"; transcript_id "ENSMUST00000188683.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28232"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28232-201"; exon_number 1; exon_id "ENSMUSE00001326015.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048510.1"; havana_transcript "OTTMUST00000124329.1";
mm10-chrY	HAVANA	gene	52905155	52908497	.	-	.	gene_id "ENSMUSG00000099506.1"; gene_type "lincRNA"; gene_name "Gm28732"; level 2; havana_gene "OTTMUSG00000048478.1";
mm10-chrY	HAVANA	transcript	52905155	52908497	.	-	.	gene_id "ENSMUSG00000099506.1"; transcript_id "ENSMUST00000189632.1"; gene_type "lincRNA"; gene_name "Gm28732"; transcript_type "lincRNA"; transcript_name "Gm28732-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048478.1"; havana_transcript "OTTMUST00000124240.1";
mm10-chrY	HAVANA	exon	52908275	52908497	.	-	.	gene_id "ENSMUSG00000099506.1"; transcript_id "ENSMUST00000189632.1"; gene_type "lincRNA"; gene_name "Gm28732"; transcript_type "lincRNA"; transcript_name "Gm28732-201"; exon_number 1; exon_id "ENSMUSE00001321634.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048478.1"; havana_transcript "OTTMUST00000124240.1";
mm10-chrY	HAVANA	exon	52905155	52907098	.	-	.	gene_id "ENSMUSG00000099506.1"; transcript_id "ENSMUST00000189632.1"; gene_type "lincRNA"; gene_name "Gm28732"; transcript_type "lincRNA"; transcript_name "Gm28732-201"; exon_number 2; exon_id "ENSMUSE00001325674.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048478.1"; havana_transcript "OTTMUST00000124240.1";
mm10-chrY	HAVANA	gene	52940506	52943743	.	+	.	gene_id "ENSMUSG00000100584.6"; gene_type "lincRNA"; gene_name "Gm28733"; level 2; havana_gene "OTTMUSG00000048479.1";
mm10-chrY	HAVANA	transcript	52940506	52943743	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187597.6"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124241.1";
mm10-chrY	HAVANA	exon	52940506	52941144	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187597.6"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-202"; exon_number 1; exon_id "ENSMUSE00001321868.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124241.1";
mm10-chrY	HAVANA	exon	52941630	52941815	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187597.6"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-202"; exon_number 2; exon_id "ENSMUSE00001331303.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124241.1";
mm10-chrY	HAVANA	exon	52942545	52942728	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187597.6"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-202"; exon_number 3; exon_id "ENSMUSE00001327869.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124241.1";
mm10-chrY	HAVANA	exon	52943255	52943743	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187597.6"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-202"; exon_number 4; exon_id "ENSMUSE00001331444.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124241.1";
mm10-chrY	HAVANA	transcript	52940959	52943323	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187669.6"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124242.1";
mm10-chrY	HAVANA	exon	52940959	52941144	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187669.6"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-203"; exon_number 1; exon_id "ENSMUSE00001335448.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124242.1";
mm10-chrY	HAVANA	exon	52941634	52941815	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187669.6"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-203"; exon_number 2; exon_id "ENSMUSE00001322345.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124242.1";
mm10-chrY	HAVANA	exon	52942545	52942728	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187669.6"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-203"; exon_number 3; exon_id "ENSMUSE00001327869.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124242.1";
mm10-chrY	HAVANA	exon	52943255	52943323	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187669.6"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-203"; exon_number 4; exon_id "ENSMUSE00001334370.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124242.1";
mm10-chrY	HAVANA	transcript	52940959	52943323	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187471.1"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124243.1";
mm10-chrY	HAVANA	exon	52940959	52941144	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187471.1"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-201"; exon_number 1; exon_id "ENSMUSE00001335448.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124243.1";
mm10-chrY	HAVANA	exon	52941634	52941815	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187471.1"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-201"; exon_number 2; exon_id "ENSMUSE00001322345.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124243.1";
mm10-chrY	HAVANA	exon	52943255	52943323	.	+	.	gene_id "ENSMUSG00000100584.6"; transcript_id "ENSMUST00000187471.1"; gene_type "lincRNA"; gene_name "Gm28733"; transcript_type "lincRNA"; transcript_name "Gm28733-201"; exon_number 3; exon_id "ENSMUSE00001334370.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048479.1"; havana_transcript "OTTMUST00000124243.1";
mm10-chrY	HAVANA	gene	53050791	53051486	.	-	.	gene_id "ENSMUSG00000101987.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21268"; level 2; havana_gene "OTTMUSG00000048511.1";
mm10-chrY	HAVANA	transcript	53050791	53051486	.	-	.	gene_id "ENSMUSG00000101987.1"; transcript_id "ENSMUST00000185646.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21268"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21268-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048511.1"; havana_transcript "OTTMUST00000124330.1";
mm10-chrY	HAVANA	exon	53050791	53051486	.	-	.	gene_id "ENSMUSG00000101987.1"; transcript_id "ENSMUST00000185646.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21268"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21268-201"; exon_number 1; exon_id "ENSMUSE00001325984.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048511.1"; havana_transcript "OTTMUST00000124330.1";
mm10-chrY	HAVANA	gene	53125511	53126206	.	-	.	gene_id "ENSMUSG00000100072.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21275"; level 2; havana_gene "OTTMUSG00000048512.1";
mm10-chrY	HAVANA	transcript	53125511	53126206	.	-	.	gene_id "ENSMUSG00000100072.1"; transcript_id "ENSMUST00000185958.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21275"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21275-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048512.1"; havana_transcript "OTTMUST00000124331.1";
mm10-chrY	HAVANA	exon	53125511	53126206	.	-	.	gene_id "ENSMUSG00000100072.1"; transcript_id "ENSMUST00000185958.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21275"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21275-201"; exon_number 1; exon_id "ENSMUSE00001330887.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048512.1"; havana_transcript "OTTMUST00000124331.1";
mm10-chrY	HAVANA	gene	53142435	53143976	.	+	.	gene_id "ENSMUSG00000101570.1"; gene_type "lincRNA"; gene_name "Gm28233"; level 2; havana_gene "OTTMUSG00000048513.1";
mm10-chrY	HAVANA	transcript	53142435	53143976	.	+	.	gene_id "ENSMUSG00000101570.1"; transcript_id "ENSMUST00000189360.1"; gene_type "lincRNA"; gene_name "Gm28233"; transcript_type "lincRNA"; transcript_name "Gm28233-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048513.1"; havana_transcript "OTTMUST00000124332.1";
mm10-chrY	HAVANA	exon	53142435	53142652	.	+	.	gene_id "ENSMUSG00000101570.1"; transcript_id "ENSMUST00000189360.1"; gene_type "lincRNA"; gene_name "Gm28233"; transcript_type "lincRNA"; transcript_name "Gm28233-201"; exon_number 1; exon_id "ENSMUSE00001332010.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048513.1"; havana_transcript "OTTMUST00000124332.1";
mm10-chrY	HAVANA	exon	53143839	53143976	.	+	.	gene_id "ENSMUSG00000101570.1"; transcript_id "ENSMUST00000189360.1"; gene_type "lincRNA"; gene_name "Gm28233"; transcript_type "lincRNA"; transcript_name "Gm28233-201"; exon_number 2; exon_id "ENSMUSE00001321726.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048513.1"; havana_transcript "OTTMUST00000124332.1";
mm10-chrY	HAVANA	gene	53146640	53148054	.	-	.	gene_id "ENSMUSG00000101885.1"; gene_type "lincRNA"; gene_name "Gm28235"; level 2; havana_gene "OTTMUSG00000048514.1";
mm10-chrY	HAVANA	transcript	53146640	53148054	.	-	.	gene_id "ENSMUSG00000101885.1"; transcript_id "ENSMUST00000185828.1"; gene_type "lincRNA"; gene_name "Gm28235"; transcript_type "lincRNA"; transcript_name "Gm28235-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048514.1"; havana_transcript "OTTMUST00000124333.1";
mm10-chrY	HAVANA	exon	53147801	53148054	.	-	.	gene_id "ENSMUSG00000101885.1"; transcript_id "ENSMUST00000185828.1"; gene_type "lincRNA"; gene_name "Gm28235"; transcript_type "lincRNA"; transcript_name "Gm28235-201"; exon_number 1; exon_id "ENSMUSE00001329169.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048514.1"; havana_transcript "OTTMUST00000124333.1";
mm10-chrY	HAVANA	exon	53146640	53147505	.	-	.	gene_id "ENSMUSG00000101885.1"; transcript_id "ENSMUST00000185828.1"; gene_type "lincRNA"; gene_name "Gm28235"; transcript_type "lincRNA"; transcript_name "Gm28235-201"; exon_number 2; exon_id "ENSMUSE00001326421.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048514.1"; havana_transcript "OTTMUST00000124333.1";
mm10-chrY	HAVANA	gene	53155091	53155705	.	-	.	gene_id "ENSMUSG00000100095.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28234"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048515.1";
mm10-chrY	HAVANA	transcript	53155091	53155705	.	-	.	gene_id "ENSMUSG00000100095.1"; transcript_id "ENSMUST00000185657.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28234"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28234-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048515.1"; havana_transcript "OTTMUST00000124334.1";
mm10-chrY	HAVANA	exon	53155091	53155705	.	-	.	gene_id "ENSMUSG00000100095.1"; transcript_id "ENSMUST00000185657.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28234"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28234-201"; exon_number 1; exon_id "ENSMUSE00001324693.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048515.1"; havana_transcript "OTTMUST00000124334.1";
mm10-chrY	HAVANA	gene	53191846	53192541	.	-	.	gene_id "ENSMUSG00000101420.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21902"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048516.1";
mm10-chrY	HAVANA	transcript	53191846	53192541	.	-	.	gene_id "ENSMUSG00000101420.1"; transcript_id "ENSMUST00000190361.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21902"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21902-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048516.1"; havana_transcript "OTTMUST00000124335.1";
mm10-chrY	HAVANA	exon	53191846	53192541	.	-	.	gene_id "ENSMUSG00000101420.1"; transcript_id "ENSMUST00000190361.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21902"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21902-201"; exon_number 1; exon_id "ENSMUSE00001335525.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048516.1"; havana_transcript "OTTMUST00000124335.1";
mm10-chrY	HAVANA	gene	53234010	53237249	.	+	.	gene_id "ENSMUSG00000099654.6"; gene_type "lincRNA"; gene_name "Gm28236"; level 2; havana_gene "OTTMUSG00000048517.1";
mm10-chrY	HAVANA	transcript	53234010	53237249	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000188311.6"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124336.1";
mm10-chrY	HAVANA	exon	53234010	53234650	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000188311.6"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-203"; exon_number 1; exon_id "ENSMUSE00001319075.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124336.1";
mm10-chrY	HAVANA	exon	53235136	53235321	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000188311.6"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-203"; exon_number 2; exon_id "ENSMUSE00001335126.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124336.1";
mm10-chrY	HAVANA	exon	53236051	53236233	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000188311.6"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-203"; exon_number 3; exon_id "ENSMUSE00001327766.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124336.1";
mm10-chrY	HAVANA	exon	53236761	53237249	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000188311.6"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-203"; exon_number 4; exon_id "ENSMUSE00001335038.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124336.1";
mm10-chrY	HAVANA	transcript	53234463	53236829	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000186873.6"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124337.1";
mm10-chrY	HAVANA	exon	53234463	53234650	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000186873.6"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-202"; exon_number 1; exon_id "ENSMUSE00001329063.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124337.1";
mm10-chrY	HAVANA	exon	53235140	53235321	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000186873.6"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-202"; exon_number 2; exon_id "ENSMUSE00001329308.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124337.1";
mm10-chrY	HAVANA	exon	53236761	53236829	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000186873.6"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-202"; exon_number 3; exon_id "ENSMUSE00001319803.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124337.1";
mm10-chrY	HAVANA	transcript	53234463	53236829	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000185554.1"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124338.1";
mm10-chrY	HAVANA	exon	53234463	53234650	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000185554.1"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-201"; exon_number 1; exon_id "ENSMUSE00001329063.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124338.1";
mm10-chrY	HAVANA	exon	53235140	53235321	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000185554.1"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-201"; exon_number 2; exon_id "ENSMUSE00001329308.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124338.1";
mm10-chrY	HAVANA	exon	53236051	53236233	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000185554.1"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-201"; exon_number 3; exon_id "ENSMUSE00001327766.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124338.1";
mm10-chrY	HAVANA	exon	53236761	53236829	.	+	.	gene_id "ENSMUSG00000099654.6"; transcript_id "ENSMUST00000185554.1"; gene_type "lincRNA"; gene_name "Gm28236"; transcript_type "lincRNA"; transcript_name "Gm28236-201"; exon_number 4; exon_id "ENSMUSE00001319803.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048517.1"; havana_transcript "OTTMUST00000124338.1";
mm10-chrY	HAVANA	gene	53341562	53342254	.	-	.	gene_id "ENSMUSG00000100834.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21285"; level 2; havana_gene "OTTMUSG00000048518.1";
mm10-chrY	HAVANA	transcript	53341562	53342254	.	-	.	gene_id "ENSMUSG00000100834.1"; transcript_id "ENSMUST00000191214.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21285"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21285-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048518.1"; havana_transcript "OTTMUST00000124339.1";
mm10-chrY	HAVANA	exon	53341562	53342254	.	-	.	gene_id "ENSMUSG00000100834.1"; transcript_id "ENSMUST00000191214.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21285"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21285-201"; exon_number 1; exon_id "ENSMUSE00001327993.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048518.1"; havana_transcript "OTTMUST00000124339.1";
mm10-chrY	HAVANA	gene	53415953	53418291	.	-	.	gene_id "ENSMUSG00000094729.2"; gene_type "protein_coding"; gene_name "Gm20747"; level 2; havana_gene "OTTMUSG00000048519.2";
mm10-chrY	HAVANA	transcript	53415953	53418291	.	-	.	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000187856.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-202"; level 2; protein_id "ENSMUSP00000139491.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2"; havana_transcript "OTTMUST00000124340.2";
mm10-chrY	HAVANA	exon	53418173	53418291	.	-	.	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000187856.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-202"; exon_number 1; exon_id "ENSMUSE00001320352.1"; level 2; protein_id "ENSMUSP00000139491.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2"; havana_transcript "OTTMUST00000124340.2";
mm10-chrY	HAVANA	exon	53415953	53417056	.	-	.	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000187856.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-202"; exon_number 2; exon_id "ENSMUSE00001325868.1"; level 2; protein_id "ENSMUSP00000139491.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2"; havana_transcript "OTTMUST00000124340.2";
mm10-chrY	HAVANA	CDS	53416095	53416775	.	-	0	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000187856.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-202"; exon_number 2; exon_id "ENSMUSE00001325868.1"; level 2; protein_id "ENSMUSP00000139491.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2"; havana_transcript "OTTMUST00000124340.2";
mm10-chrY	HAVANA	start_codon	53416773	53416775	.	-	0	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000187856.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-202"; exon_number 2; exon_id "ENSMUSE00001325868.1"; level 2; protein_id "ENSMUSP00000139491.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2"; havana_transcript "OTTMUST00000124340.2";
mm10-chrY	HAVANA	stop_codon	53416092	53416094	.	-	0	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000187856.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-202"; exon_number 2; exon_id "ENSMUSE00001325868.1"; level 2; protein_id "ENSMUSP00000139491.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2"; havana_transcript "OTTMUST00000124340.2";
mm10-chrY	HAVANA	UTR	53418173	53418291	.	-	.	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000187856.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-202"; exon_number 1; exon_id "ENSMUSE00001320352.1"; level 2; protein_id "ENSMUSP00000139491.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2"; havana_transcript "OTTMUST00000124340.2";
mm10-chrY	HAVANA	UTR	53415953	53416094	.	-	.	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000187856.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-202"; exon_number 2; exon_id "ENSMUSE00001325868.1"; level 2; protein_id "ENSMUSP00000139491.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2"; havana_transcript "OTTMUST00000124340.2";
mm10-chrY	HAVANA	UTR	53416776	53417056	.	-	.	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000187856.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-202"; exon_number 2; exon_id "ENSMUSE00001325868.1"; level 2; protein_id "ENSMUSP00000139491.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2"; havana_transcript "OTTMUST00000124340.2";
mm10-chrY	ENSEMBL	transcript	53416092	53416775	.	-	.	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000179137.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-201"; level 3; protein_id "ENSMUSP00000136937.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2";
mm10-chrY	ENSEMBL	exon	53416092	53416775	.	-	.	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000179137.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-201"; exon_number 1; exon_id "ENSMUSE00001003448.1"; level 3; protein_id "ENSMUSP00000136937.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2";
mm10-chrY	ENSEMBL	CDS	53416095	53416775	.	-	0	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000179137.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-201"; exon_number 1; exon_id "ENSMUSE00001003448.1"; level 3; protein_id "ENSMUSP00000136937.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2";
mm10-chrY	ENSEMBL	start_codon	53416773	53416775	.	-	0	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000179137.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-201"; exon_number 1; exon_id "ENSMUSE00001003448.1"; level 3; protein_id "ENSMUSP00000136937.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2";
mm10-chrY	ENSEMBL	stop_codon	53416092	53416094	.	-	0	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000179137.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-201"; exon_number 1; exon_id "ENSMUSE00001003448.1"; level 3; protein_id "ENSMUSP00000136937.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2";
mm10-chrY	ENSEMBL	UTR	53416092	53416094	.	-	.	gene_id "ENSMUSG00000094729.2"; transcript_id "ENSMUST00000179137.1"; gene_type "protein_coding"; gene_name "Gm20747"; transcript_type "protein_coding"; transcript_name "Gm20747-201"; exon_number 1; exon_id "ENSMUSE00001003448.1"; level 3; protein_id "ENSMUSP00000136937.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85884.1"; havana_gene "OTTMUSG00000048519.2";
mm10-chrY	HAVANA	gene	53435828	53437381	.	+	.	gene_id "ENSMUSG00000100332.1"; gene_type "lincRNA"; gene_name "Gm29250"; level 2; havana_gene "OTTMUSG00000048520.1";
mm10-chrY	HAVANA	transcript	53435828	53437381	.	+	.	gene_id "ENSMUSG00000100332.1"; transcript_id "ENSMUST00000191372.1"; gene_type "lincRNA"; gene_name "Gm29250"; transcript_type "lincRNA"; transcript_name "Gm29250-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048520.1"; havana_transcript "OTTMUST00000124341.1";
mm10-chrY	HAVANA	exon	53435828	53436063	.	+	.	gene_id "ENSMUSG00000100332.1"; transcript_id "ENSMUST00000191372.1"; gene_type "lincRNA"; gene_name "Gm29250"; transcript_type "lincRNA"; transcript_name "Gm29250-201"; exon_number 1; exon_id "ENSMUSE00001332234.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048520.1"; havana_transcript "OTTMUST00000124341.1";
mm10-chrY	HAVANA	exon	53437250	53437381	.	+	.	gene_id "ENSMUSG00000100332.1"; transcript_id "ENSMUST00000191372.1"; gene_type "lincRNA"; gene_name "Gm29250"; transcript_type "lincRNA"; transcript_name "Gm29250-201"; exon_number 2; exon_id "ENSMUSE00001333747.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048520.1"; havana_transcript "OTTMUST00000124341.1";
mm10-chrY	HAVANA	gene	53448533	53449147	.	-	.	gene_id "ENSMUSG00000100678.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29251"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048521.1";
mm10-chrY	HAVANA	transcript	53448533	53449147	.	-	.	gene_id "ENSMUSG00000100678.1"; transcript_id "ENSMUST00000191480.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29251"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29251-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048521.1"; havana_transcript "OTTMUST00000124342.1";
mm10-chrY	HAVANA	exon	53448533	53449147	.	-	.	gene_id "ENSMUSG00000100678.1"; transcript_id "ENSMUST00000191480.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29251"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29251-201"; exon_number 1; exon_id "ENSMUSE00001327949.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048521.1"; havana_transcript "OTTMUST00000124342.1";
mm10-chrY	HAVANA	gene	53485378	53486073	.	-	.	gene_id "ENSMUSG00000100507.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21906"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048522.1";
mm10-chrY	HAVANA	transcript	53485378	53486073	.	-	.	gene_id "ENSMUSG00000100507.1"; transcript_id "ENSMUST00000189760.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21906"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21906-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048522.1"; havana_transcript "OTTMUST00000124343.1";
mm10-chrY	HAVANA	exon	53485378	53486073	.	-	.	gene_id "ENSMUSG00000100507.1"; transcript_id "ENSMUST00000189760.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21906"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21906-201"; exon_number 1; exon_id "ENSMUSE00001322802.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048522.1"; havana_transcript "OTTMUST00000124343.1";
mm10-chrY	HAVANA	gene	53492167	53495514	.	-	.	gene_id "ENSMUSG00000101547.1"; gene_type "lincRNA"; gene_name "Gm29252"; level 2; havana_gene "OTTMUSG00000048523.1";
mm10-chrY	HAVANA	transcript	53492167	53495514	.	-	.	gene_id "ENSMUSG00000101547.1"; transcript_id "ENSMUST00000189869.1"; gene_type "lincRNA"; gene_name "Gm29252"; transcript_type "lincRNA"; transcript_name "Gm29252-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048523.1"; havana_transcript "OTTMUST00000124344.1";
mm10-chrY	HAVANA	exon	53495292	53495514	.	-	.	gene_id "ENSMUSG00000101547.1"; transcript_id "ENSMUST00000189869.1"; gene_type "lincRNA"; gene_name "Gm29252"; transcript_type "lincRNA"; transcript_name "Gm29252-201"; exon_number 1; exon_id "ENSMUSE00001329037.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048523.1"; havana_transcript "OTTMUST00000124344.1";
mm10-chrY	HAVANA	exon	53492167	53494110	.	-	.	gene_id "ENSMUSG00000101547.1"; transcript_id "ENSMUST00000189869.1"; gene_type "lincRNA"; gene_name "Gm29252"; transcript_type "lincRNA"; transcript_name "Gm29252-201"; exon_number 2; exon_id "ENSMUSE00001329572.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048523.1"; havana_transcript "OTTMUST00000124344.1";
mm10-chrY	HAVANA	gene	53527413	53530651	.	+	.	gene_id "ENSMUSG00000100401.6"; gene_type "lincRNA"; gene_name "Gm29248"; level 2; havana_gene "OTTMUSG00000048524.1";
mm10-chrY	HAVANA	transcript	53527413	53530651	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000186074.6"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124345.1";
mm10-chrY	HAVANA	exon	53527413	53528051	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000186074.6"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-201"; exon_number 1; exon_id "ENSMUSE00001322444.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124345.1";
mm10-chrY	HAVANA	exon	53528537	53528722	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000186074.6"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-201"; exon_number 2; exon_id "ENSMUSE00001330311.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124345.1";
mm10-chrY	HAVANA	exon	53529452	53529635	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000186074.6"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-201"; exon_number 3; exon_id "ENSMUSE00001332822.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124345.1";
mm10-chrY	HAVANA	exon	53530163	53530651	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000186074.6"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-201"; exon_number 4; exon_id "ENSMUSE00001332200.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124345.1";
mm10-chrY	HAVANA	transcript	53527865	53530231	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000189397.6"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124346.1";
mm10-chrY	HAVANA	exon	53527865	53528051	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000189397.6"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-203"; exon_number 1; exon_id "ENSMUSE00001322404.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124346.1";
mm10-chrY	HAVANA	exon	53528541	53528722	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000189397.6"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-203"; exon_number 2; exon_id "ENSMUSE00001327760.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124346.1";
mm10-chrY	HAVANA	exon	53530163	53530231	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000189397.6"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-203"; exon_number 3; exon_id "ENSMUSE00001326099.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124346.1";
mm10-chrY	HAVANA	transcript	53527865	53530231	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000186502.1"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124347.1";
mm10-chrY	HAVANA	exon	53527865	53528051	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000186502.1"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-202"; exon_number 1; exon_id "ENSMUSE00001322404.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124347.1";
mm10-chrY	HAVANA	exon	53528541	53528722	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000186502.1"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-202"; exon_number 2; exon_id "ENSMUSE00001327760.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124347.1";
mm10-chrY	HAVANA	exon	53529452	53529635	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000186502.1"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-202"; exon_number 3; exon_id "ENSMUSE00001332822.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124347.1";
mm10-chrY	HAVANA	exon	53530163	53530231	.	+	.	gene_id "ENSMUSG00000100401.6"; transcript_id "ENSMUST00000186502.1"; gene_type "lincRNA"; gene_name "Gm29248"; transcript_type "lincRNA"; transcript_name "Gm29248-202"; exon_number 4; exon_id "ENSMUSE00001326099.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048524.1"; havana_transcript "OTTMUST00000124347.1";
mm10-chrY	HAVANA	gene	53638130	53638825	.	-	.	gene_id "ENSMUSG00000101992.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29249"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048525.1";
mm10-chrY	HAVANA	transcript	53638130	53638825	.	-	.	gene_id "ENSMUSG00000101992.1"; transcript_id "ENSMUST00000189647.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29249"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29249-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048525.1"; havana_transcript "OTTMUST00000124348.1";
mm10-chrY	HAVANA	exon	53638130	53638825	.	-	.	gene_id "ENSMUSG00000101992.1"; transcript_id "ENSMUST00000189647.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29249"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29249-201"; exon_number 1; exon_id "ENSMUSE00001320108.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048525.1"; havana_transcript "OTTMUST00000124348.1";
mm10-chrY	HAVANA	gene	53712724	53713047	.	+	.	gene_id "ENSMUSG00000101367.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29484"; level 2; havana_gene "OTTMUSG00000048579.1";
mm10-chrY	HAVANA	transcript	53712724	53713047	.	+	.	gene_id "ENSMUSG00000101367.1"; transcript_id "ENSMUST00000186067.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29484"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29484-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048579.1"; havana_transcript "OTTMUST00000124456.1";
mm10-chrY	HAVANA	exon	53712724	53713047	.	+	.	gene_id "ENSMUSG00000101367.1"; transcript_id "ENSMUST00000186067.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29484"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29484-201"; exon_number 1; exon_id "ENSMUSE00001318822.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048579.1"; havana_transcript "OTTMUST00000124456.1";
mm10-chrY	HAVANA	gene	53712724	53713418	.	-	.	gene_id "ENSMUSG00000101665.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21920"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048580.1";
mm10-chrY	HAVANA	transcript	53712724	53713418	.	-	.	gene_id "ENSMUSG00000101665.1"; transcript_id "ENSMUST00000190042.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21920"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21920-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048580.1"; havana_transcript "OTTMUST00000124457.1";
mm10-chrY	HAVANA	exon	53712724	53713418	.	-	.	gene_id "ENSMUSG00000101665.1"; transcript_id "ENSMUST00000190042.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21920"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21920-201"; exon_number 1; exon_id "ENSMUSE00001331261.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048580.1"; havana_transcript "OTTMUST00000124457.1";
mm10-chrY	HAVANA	gene	53729612	53731157	.	+	.	gene_id "ENSMUSG00000100778.1"; gene_type "lincRNA"; gene_name "Gm28908"; level 2; havana_gene "OTTMUSG00000048581.1";
mm10-chrY	HAVANA	transcript	53729612	53731157	.	+	.	gene_id "ENSMUSG00000100778.1"; transcript_id "ENSMUST00000189002.1"; gene_type "lincRNA"; gene_name "Gm28908"; transcript_type "lincRNA"; transcript_name "Gm28908-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048581.1"; havana_transcript "OTTMUST00000124458.1";
mm10-chrY	HAVANA	exon	53729612	53729829	.	+	.	gene_id "ENSMUSG00000100778.1"; transcript_id "ENSMUST00000189002.1"; gene_type "lincRNA"; gene_name "Gm28908"; transcript_type "lincRNA"; transcript_name "Gm28908-201"; exon_number 1; exon_id "ENSMUSE00001328187.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048581.1"; havana_transcript "OTTMUST00000124458.1";
mm10-chrY	HAVANA	exon	53731020	53731157	.	+	.	gene_id "ENSMUSG00000100778.1"; transcript_id "ENSMUST00000189002.1"; gene_type "lincRNA"; gene_name "Gm28908"; transcript_type "lincRNA"; transcript_name "Gm28908-201"; exon_number 2; exon_id "ENSMUSE00001326561.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048581.1"; havana_transcript "OTTMUST00000124458.1";
mm10-chrY	HAVANA	gene	53744649	53745263	.	-	.	gene_id "ENSMUSG00000100835.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28907"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048582.1";
mm10-chrY	HAVANA	transcript	53744649	53745263	.	-	.	gene_id "ENSMUSG00000100835.1"; transcript_id "ENSMUST00000189700.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28907"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28907-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048582.1"; havana_transcript "OTTMUST00000124459.1";
mm10-chrY	HAVANA	exon	53744649	53745263	.	-	.	gene_id "ENSMUSG00000100835.1"; transcript_id "ENSMUST00000189700.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28907"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28907-201"; exon_number 1; exon_id "ENSMUSE00001331856.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048582.1"; havana_transcript "OTTMUST00000124459.1";
mm10-chrY	HAVANA	gene	53781510	53782205	.	-	.	gene_id "ENSMUSG00000101446.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21749"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048583.1";
mm10-chrY	HAVANA	transcript	53781510	53782205	.	-	.	gene_id "ENSMUSG00000101446.1"; transcript_id "ENSMUST00000189343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21749"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21749-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048583.1"; havana_transcript "OTTMUST00000124460.1";
mm10-chrY	HAVANA	exon	53781510	53782205	.	-	.	gene_id "ENSMUSG00000101446.1"; transcript_id "ENSMUST00000189343.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21749"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21749-201"; exon_number 1; exon_id "ENSMUSE00001327676.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048583.1"; havana_transcript "OTTMUST00000124460.1";
mm10-chrY	HAVANA	gene	53843949	53870150	.	+	.	gene_id "ENSMUSG00000100045.1"; gene_type "protein_coding"; gene_name "Gm20929"; level 2; havana_gene "OTTMUSG00000048584.1";
mm10-chrY	HAVANA	transcript	53843949	53870150	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	exon	53843949	53843992	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 1; exon_id "ENSMUSE00001335544.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	exon	53845354	53845485	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 2; exon_id "ENSMUSE00001332609.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	CDS	53845368	53845485	.	+	0	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 2; exon_id "ENSMUSE00001332609.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	start_codon	53845368	53845370	.	+	0	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 2; exon_id "ENSMUSE00001332609.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	exon	53850816	53850882	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 3; exon_id "ENSMUSE00001324974.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	CDS	53850816	53850882	.	+	2	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 3; exon_id "ENSMUSE00001324974.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	exon	53851548	53851582	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 4; exon_id "ENSMUSE00001334943.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	CDS	53851548	53851582	.	+	1	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 4; exon_id "ENSMUSE00001334943.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	exon	53858588	53858654	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 5; exon_id "ENSMUSE00001319493.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	CDS	53858588	53858654	.	+	2	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 5; exon_id "ENSMUSE00001319493.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	exon	53859232	53859266	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 6; exon_id "ENSMUSE00001335357.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	CDS	53859232	53859266	.	+	1	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 6; exon_id "ENSMUSE00001335357.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	exon	53866429	53866546	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 7; exon_id "ENSMUSE00001327131.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	CDS	53866429	53866546	.	+	2	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 7; exon_id "ENSMUSE00001327131.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	exon	53867338	53867437	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 8; exon_id "ENSMUSE00001324044.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	CDS	53867338	53867437	.	+	1	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 8; exon_id "ENSMUSE00001324044.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	exon	53869467	53869565	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 9; exon_id "ENSMUSE00001335845.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	CDS	53869467	53869565	.	+	0	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 9; exon_id "ENSMUSE00001335845.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	exon	53869925	53870150	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 10; exon_id "ENSMUSE00001331463.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	CDS	53869925	53869951	.	+	0	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 10; exon_id "ENSMUSE00001331463.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	stop_codon	53869952	53869954	.	+	0	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 10; exon_id "ENSMUSE00001331463.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	UTR	53843949	53843992	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 1; exon_id "ENSMUSE00001335544.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	UTR	53845354	53845367	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 2; exon_id "ENSMUSE00001332609.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	UTR	53869952	53870150	.	+	.	gene_id "ENSMUSG00000100045.1"; transcript_id "ENSMUST00000186578.1"; gene_type "protein_coding"; gene_name "Gm20929"; transcript_type "protein_coding"; transcript_name "Gm20929-201"; exon_number 10; exon_id "ENSMUSE00001331463.1"; level 2; protein_id "ENSMUSP00000139649.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048584.1"; havana_transcript "OTTMUST00000124461.1";
mm10-chrY	HAVANA	gene	53935335	53936030	.	-	.	gene_id "ENSMUSG00000101018.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28910"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048585.1";
mm10-chrY	HAVANA	transcript	53935335	53936030	.	-	.	gene_id "ENSMUSG00000101018.1"; transcript_id "ENSMUST00000185921.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28910"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28910-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048585.1"; havana_transcript "OTTMUST00000124462.1";
mm10-chrY	HAVANA	exon	53935335	53936030	.	-	.	gene_id "ENSMUSG00000101018.1"; transcript_id "ENSMUST00000185921.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28910"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28910-201"; exon_number 1; exon_id "ENSMUSE00001333036.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048585.1"; havana_transcript "OTTMUST00000124462.1";
mm10-chrY	HAVANA	gene	53963830	53964144	.	-	.	gene_id "ENSMUSG00000101178.1"; gene_type "processed_pseudogene"; gene_name "Gm28909"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048586.1";
mm10-chrY	HAVANA	transcript	53963830	53964144	.	-	.	gene_id "ENSMUSG00000101178.1"; transcript_id "ENSMUST00000189406.1"; gene_type "processed_pseudogene"; gene_name "Gm28909"; transcript_type "processed_pseudogene"; transcript_name "Gm28909-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048586.1"; havana_transcript "OTTMUST00000124463.1";
mm10-chrY	HAVANA	exon	53963830	53964144	.	-	.	gene_id "ENSMUSG00000101178.1"; transcript_id "ENSMUST00000189406.1"; gene_type "processed_pseudogene"; gene_name "Gm28909"; transcript_type "processed_pseudogene"; transcript_name "Gm28909-201"; exon_number 1; exon_id "ENSMUSE00001326791.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048586.1"; havana_transcript "OTTMUST00000124463.1";
mm10-chrY	HAVANA	gene	53965560	53968902	.	-	.	gene_id "ENSMUSG00000101566.1"; gene_type "lincRNA"; gene_name "Gm28276"; level 2; havana_gene "OTTMUSG00000048587.1";
mm10-chrY	HAVANA	transcript	53965560	53968902	.	-	.	gene_id "ENSMUSG00000101566.1"; transcript_id "ENSMUST00000188508.1"; gene_type "lincRNA"; gene_name "Gm28276"; transcript_type "lincRNA"; transcript_name "Gm28276-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048587.1"; havana_transcript "OTTMUST00000124464.1";
mm10-chrY	HAVANA	exon	53968680	53968902	.	-	.	gene_id "ENSMUSG00000101566.1"; transcript_id "ENSMUST00000188508.1"; gene_type "lincRNA"; gene_name "Gm28276"; transcript_type "lincRNA"; transcript_name "Gm28276-201"; exon_number 1; exon_id "ENSMUSE00001333031.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048587.1"; havana_transcript "OTTMUST00000124464.1";
mm10-chrY	HAVANA	exon	53965560	53967502	.	-	.	gene_id "ENSMUSG00000101566.1"; transcript_id "ENSMUST00000188508.1"; gene_type "lincRNA"; gene_name "Gm28276"; transcript_type "lincRNA"; transcript_name "Gm28276-201"; exon_number 2; exon_id "ENSMUSE00001323144.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048587.1"; havana_transcript "OTTMUST00000124464.1";
mm10-chrY	HAVANA	gene	54001257	54004153	.	+	.	gene_id "ENSMUSG00000101190.6"; gene_type "lincRNA"; gene_name "Gm28274"; level 2; havana_gene "OTTMUSG00000048588.1";
mm10-chrY	HAVANA	transcript	54001257	54004153	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000187775.6"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124465.1";
mm10-chrY	HAVANA	exon	54001257	54001551	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000187775.6"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-202"; exon_number 1; exon_id "ENSMUSE00001319393.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124465.1";
mm10-chrY	HAVANA	exon	54002037	54002222	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000187775.6"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-202"; exon_number 2; exon_id "ENSMUSE00001324715.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124465.1";
mm10-chrY	HAVANA	exon	54002952	54003135	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000187775.6"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-202"; exon_number 3; exon_id "ENSMUSE00001325899.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124465.1";
mm10-chrY	HAVANA	exon	54003662	54004153	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000187775.6"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-202"; exon_number 4; exon_id "ENSMUSE00001322700.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124465.1";
mm10-chrY	HAVANA	transcript	54001366	54003730	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000187320.6"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124466.1";
mm10-chrY	HAVANA	exon	54001366	54001551	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000187320.6"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-201"; exon_number 1; exon_id "ENSMUSE00001319852.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124466.1";
mm10-chrY	HAVANA	exon	54002041	54002222	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000187320.6"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-201"; exon_number 2; exon_id "ENSMUSE00001324195.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124466.1";
mm10-chrY	HAVANA	exon	54003662	54003730	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000187320.6"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-201"; exon_number 3; exon_id "ENSMUSE00001327669.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124466.1";
mm10-chrY	HAVANA	transcript	54001366	54003730	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000190189.1"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124467.1";
mm10-chrY	HAVANA	exon	54001366	54001551	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000190189.1"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-203"; exon_number 1; exon_id "ENSMUSE00001319852.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124467.1";
mm10-chrY	HAVANA	exon	54002041	54002222	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000190189.1"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-203"; exon_number 2; exon_id "ENSMUSE00001324195.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124467.1";
mm10-chrY	HAVANA	exon	54002952	54003135	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000190189.1"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-203"; exon_number 3; exon_id "ENSMUSE00001325899.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124467.1";
mm10-chrY	HAVANA	exon	54003662	54003730	.	+	.	gene_id "ENSMUSG00000101190.6"; transcript_id "ENSMUST00000190189.1"; gene_type "lincRNA"; gene_name "Gm28274"; transcript_type "lincRNA"; transcript_name "Gm28274-203"; exon_number 4; exon_id "ENSMUSE00001327669.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048588.1"; havana_transcript "OTTMUST00000124467.1";
mm10-chrY	HAVANA	gene	54111675	54112369	.	-	.	gene_id "ENSMUSG00000099942.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28275"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048589.1";
mm10-chrY	HAVANA	transcript	54111675	54112369	.	-	.	gene_id "ENSMUSG00000099942.1"; transcript_id "ENSMUST00000189795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28275"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28275-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048589.1"; havana_transcript "OTTMUST00000124468.1";
mm10-chrY	HAVANA	exon	54111675	54112369	.	-	.	gene_id "ENSMUSG00000099942.1"; transcript_id "ENSMUST00000189795.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28275"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28275-201"; exon_number 1; exon_id "ENSMUSE00001333661.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048589.1"; havana_transcript "OTTMUST00000124468.1";
mm10-chrY	HAVANA	gene	54185975	54186670	.	-	.	gene_id "ENSMUSG00000100864.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21302"; level 2; havana_gene "OTTMUSG00000048590.1";
mm10-chrY	HAVANA	transcript	54185975	54186670	.	-	.	gene_id "ENSMUSG00000100864.1"; transcript_id "ENSMUST00000188765.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21302"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21302-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048590.1"; havana_transcript "OTTMUST00000124469.1";
mm10-chrY	HAVANA	exon	54185975	54186670	.	-	.	gene_id "ENSMUSG00000100864.1"; transcript_id "ENSMUST00000188765.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21302"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21302-201"; exon_number 1; exon_id "ENSMUSE00001327240.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048590.1"; havana_transcript "OTTMUST00000124469.1";
mm10-chrY	HAVANA	gene	54215782	54216395	.	-	.	gene_id "ENSMUSG00000101368.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28290"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048591.1";
mm10-chrY	HAVANA	transcript	54215782	54216395	.	-	.	gene_id "ENSMUSG00000101368.1"; transcript_id "ENSMUST00000186505.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28290"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28290-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048591.1"; havana_transcript "OTTMUST00000124470.1";
mm10-chrY	HAVANA	exon	54215782	54216395	.	-	.	gene_id "ENSMUSG00000101368.1"; transcript_id "ENSMUST00000186505.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28290"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28290-201"; exon_number 1; exon_id "ENSMUSE00001319783.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048591.1"; havana_transcript "OTTMUST00000124470.1";
mm10-chrY	HAVANA	gene	54252619	54253315	.	-	.	gene_id "ENSMUSG00000099682.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28292"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048592.1";
mm10-chrY	HAVANA	transcript	54252619	54253315	.	-	.	gene_id "ENSMUSG00000099682.1"; transcript_id "ENSMUST00000186593.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28292"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28292-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048592.1"; havana_transcript "OTTMUST00000124471.1";
mm10-chrY	HAVANA	exon	54252619	54253315	.	-	.	gene_id "ENSMUSG00000099682.1"; transcript_id "ENSMUST00000186593.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28292"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28292-201"; exon_number 1; exon_id "ENSMUSE00001325462.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048592.1"; havana_transcript "OTTMUST00000124471.1";
mm10-chrY	HAVANA	gene	54290514	54293753	.	+	.	gene_id "ENSMUSG00000100227.6"; gene_type "lincRNA"; gene_name "Gm28291"; level 2; havana_gene "OTTMUSG00000048593.1";
mm10-chrY	HAVANA	transcript	54290514	54293753	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000186921.6"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124472.1";
mm10-chrY	HAVANA	exon	54290514	54291153	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000186921.6"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-202"; exon_number 1; exon_id "ENSMUSE00001332331.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124472.1";
mm10-chrY	HAVANA	exon	54291639	54291824	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000186921.6"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-202"; exon_number 2; exon_id "ENSMUSE00001326012.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124472.1";
mm10-chrY	HAVANA	exon	54292554	54292737	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000186921.6"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-202"; exon_number 3; exon_id "ENSMUSE00001333221.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124472.1";
mm10-chrY	HAVANA	exon	54293265	54293753	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000186921.6"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-202"; exon_number 4; exon_id "ENSMUSE00001326765.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124472.1";
mm10-chrY	HAVANA	transcript	54290967	54293329	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000189226.6"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124473.1";
mm10-chrY	HAVANA	exon	54290967	54291153	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000189226.6"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-203"; exon_number 1; exon_id "ENSMUSE00001333144.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124473.1";
mm10-chrY	HAVANA	exon	54291643	54291824	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000189226.6"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-203"; exon_number 2; exon_id "ENSMUSE00001332691.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124473.1";
mm10-chrY	HAVANA	exon	54293265	54293329	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000189226.6"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-203"; exon_number 3; exon_id "ENSMUSE00001334061.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124473.1";
mm10-chrY	HAVANA	transcript	54290967	54293333	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000185456.1"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124474.1";
mm10-chrY	HAVANA	exon	54290967	54291153	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000185456.1"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-201"; exon_number 1; exon_id "ENSMUSE00001333144.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124474.1";
mm10-chrY	HAVANA	exon	54291643	54291824	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000185456.1"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-201"; exon_number 2; exon_id "ENSMUSE00001332691.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124474.1";
mm10-chrY	HAVANA	exon	54292554	54292737	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000185456.1"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-201"; exon_number 3; exon_id "ENSMUSE00001333221.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124474.1";
mm10-chrY	HAVANA	exon	54293265	54293333	.	+	.	gene_id "ENSMUSG00000100227.6"; transcript_id "ENSMUST00000185456.1"; gene_type "lincRNA"; gene_name "Gm28291"; transcript_type "lincRNA"; transcript_name "Gm28291-201"; exon_number 4; exon_id "ENSMUSE00001325621.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048593.1"; havana_transcript "OTTMUST00000124474.1";
mm10-chrY	HAVANA	gene	54331574	54334811	.	+	.	gene_id "ENSMUSG00000099456.6"; gene_type "lincRNA"; gene_name "Gm28293"; level 2; havana_gene "OTTMUSG00000048594.1";
mm10-chrY	HAVANA	transcript	54331574	54334811	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000190417.6"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124475.1";
mm10-chrY	HAVANA	exon	54331574	54332212	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000190417.6"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-202"; exon_number 1; exon_id "ENSMUSE00001335232.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124475.1";
mm10-chrY	HAVANA	exon	54332698	54332883	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000190417.6"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-202"; exon_number 2; exon_id "ENSMUSE00001324117.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124475.1";
mm10-chrY	HAVANA	exon	54333613	54333796	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000190417.6"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-202"; exon_number 3; exon_id "ENSMUSE00001325216.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124475.1";
mm10-chrY	HAVANA	exon	54334323	54334811	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000190417.6"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-202"; exon_number 4; exon_id "ENSMUSE00001333075.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124475.1";
mm10-chrY	HAVANA	transcript	54332027	54334391	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000187503.6"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124476.1";
mm10-chrY	HAVANA	exon	54332027	54332212	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000187503.6"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-201"; exon_number 1; exon_id "ENSMUSE00001321657.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124476.1";
mm10-chrY	HAVANA	exon	54332702	54332883	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000187503.6"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-201"; exon_number 2; exon_id "ENSMUSE00001330899.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124476.1";
mm10-chrY	HAVANA	exon	54333613	54333796	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000187503.6"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-201"; exon_number 3; exon_id "ENSMUSE00001325216.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124476.1";
mm10-chrY	HAVANA	exon	54334323	54334391	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000187503.6"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-201"; exon_number 4; exon_id "ENSMUSE00001321345.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124476.1";
mm10-chrY	HAVANA	transcript	54332027	54334391	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000191496.1"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124477.1";
mm10-chrY	HAVANA	exon	54332027	54332212	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000191496.1"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-203"; exon_number 1; exon_id "ENSMUSE00001321657.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124477.1";
mm10-chrY	HAVANA	exon	54332702	54332883	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000191496.1"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-203"; exon_number 2; exon_id "ENSMUSE00001330899.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124477.1";
mm10-chrY	HAVANA	exon	54334323	54334391	.	+	.	gene_id "ENSMUSG00000099456.6"; transcript_id "ENSMUST00000191496.1"; gene_type "lincRNA"; gene_name "Gm28293"; transcript_type "lincRNA"; transcript_name "Gm28293-203"; exon_number 3; exon_id "ENSMUSE00001321345.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048594.1"; havana_transcript "OTTMUST00000124477.1";
mm10-chrY	HAVANA	gene	54414823	54415518	.	-	.	gene_id "ENSMUSG00000099594.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21740"; level 2; havana_gene "OTTMUSG00000048607.1";
mm10-chrY	HAVANA	transcript	54414823	54415518	.	-	.	gene_id "ENSMUSG00000099594.1"; transcript_id "ENSMUST00000190382.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21740-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048607.1"; havana_transcript "OTTMUST00000124516.1";
mm10-chrY	HAVANA	exon	54414823	54415518	.	-	.	gene_id "ENSMUSG00000099594.1"; transcript_id "ENSMUST00000190382.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21740"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21740-201"; exon_number 1; exon_id "ENSMUSE00001318730.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048607.1"; havana_transcript "OTTMUST00000124516.1";
mm10-chrY	HAVANA	gene	54489116	54489811	.	-	.	gene_id "ENSMUSG00000101267.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21912"; level 2; havana_gene "OTTMUSG00000048608.1";
mm10-chrY	HAVANA	transcript	54489116	54489811	.	-	.	gene_id "ENSMUSG00000101267.1"; transcript_id "ENSMUST00000186393.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21912"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21912-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048608.1"; havana_transcript "OTTMUST00000124517.1";
mm10-chrY	HAVANA	exon	54489116	54489811	.	-	.	gene_id "ENSMUSG00000101267.1"; transcript_id "ENSMUST00000186393.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21912"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21912-201"; exon_number 1; exon_id "ENSMUSE00001334877.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048608.1"; havana_transcript "OTTMUST00000124517.1";
mm10-chrY	HAVANA	gene	54518821	54519435	.	-	.	gene_id "ENSMUSG00000101783.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28698"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048609.1";
mm10-chrY	HAVANA	transcript	54518821	54519435	.	-	.	gene_id "ENSMUSG00000101783.1"; transcript_id "ENSMUST00000187734.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28698"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28698-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048609.1"; havana_transcript "OTTMUST00000124518.1";
mm10-chrY	HAVANA	exon	54518821	54519435	.	-	.	gene_id "ENSMUSG00000101783.1"; transcript_id "ENSMUST00000187734.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28698"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28698-201"; exon_number 1; exon_id "ENSMUSE00001326344.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048609.1"; havana_transcript "OTTMUST00000124518.1";
mm10-chrY	HAVANA	gene	54555613	54556307	.	-	.	gene_id "ENSMUSG00000099466.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29304"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048610.1";
mm10-chrY	HAVANA	transcript	54555613	54556307	.	-	.	gene_id "ENSMUSG00000099466.1"; transcript_id "ENSMUST00000186555.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29304"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29304-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048610.1"; havana_transcript "OTTMUST00000124519.1";
mm10-chrY	HAVANA	exon	54555613	54556307	.	-	.	gene_id "ENSMUSG00000099466.1"; transcript_id "ENSMUST00000186555.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29304"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29304-201"; exon_number 1; exon_id "ENSMUSE00001319539.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048610.1"; havana_transcript "OTTMUST00000124519.1";
mm10-chrY	HAVANA	gene	54562411	54565757	.	-	.	gene_id "ENSMUSG00000100089.1"; gene_type "lincRNA"; gene_name "Gm29305"; level 2; havana_gene "OTTMUSG00000048611.1";
mm10-chrY	HAVANA	transcript	54562411	54565757	.	-	.	gene_id "ENSMUSG00000100089.1"; transcript_id "ENSMUST00000191054.1"; gene_type "lincRNA"; gene_name "Gm29305"; transcript_type "lincRNA"; transcript_name "Gm29305-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048611.1"; havana_transcript "OTTMUST00000124520.1";
mm10-chrY	HAVANA	exon	54565535	54565757	.	-	.	gene_id "ENSMUSG00000100089.1"; transcript_id "ENSMUST00000191054.1"; gene_type "lincRNA"; gene_name "Gm29305"; transcript_type "lincRNA"; transcript_name "Gm29305-201"; exon_number 1; exon_id "ENSMUSE00001332600.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048611.1"; havana_transcript "OTTMUST00000124520.1";
mm10-chrY	HAVANA	exon	54562411	54564354	.	-	.	gene_id "ENSMUSG00000100089.1"; transcript_id "ENSMUST00000191054.1"; gene_type "lincRNA"; gene_name "Gm29305"; transcript_type "lincRNA"; transcript_name "Gm29305-201"; exon_number 2; exon_id "ENSMUSE00001335364.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048611.1"; havana_transcript "OTTMUST00000124520.1";
mm10-chrY	HAVANA	gene	54604372	54607612	.	+	.	gene_id "ENSMUSG00000101542.6"; gene_type "lincRNA"; gene_name "Gm29303"; level 2; havana_gene "OTTMUSG00000048612.1";
mm10-chrY	HAVANA	transcript	54604372	54607612	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000189215.6"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124521.1";
mm10-chrY	HAVANA	exon	54604372	54605012	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000189215.6"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-201"; exon_number 1; exon_id "ENSMUSE00001327798.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124521.1";
mm10-chrY	HAVANA	exon	54605498	54605683	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000189215.6"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-201"; exon_number 2; exon_id "ENSMUSE00001332482.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124521.1";
mm10-chrY	HAVANA	exon	54606413	54606596	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000189215.6"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-201"; exon_number 3; exon_id "ENSMUSE00001322426.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124521.1";
mm10-chrY	HAVANA	exon	54607124	54607612	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000189215.6"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-201"; exon_number 4; exon_id "ENSMUSE00001331903.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124521.1";
mm10-chrY	HAVANA	transcript	54604825	54607192	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000189928.6"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124522.1";
mm10-chrY	HAVANA	exon	54604825	54605012	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000189928.6"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-202"; exon_number 1; exon_id "ENSMUSE00001334622.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124522.1";
mm10-chrY	HAVANA	exon	54605502	54605683	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000189928.6"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-202"; exon_number 2; exon_id "ENSMUSE00001334219.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124522.1";
mm10-chrY	HAVANA	exon	54606413	54606596	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000189928.6"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-202"; exon_number 3; exon_id "ENSMUSE00001322426.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124522.1";
mm10-chrY	HAVANA	exon	54607124	54607192	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000189928.6"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-202"; exon_number 4; exon_id "ENSMUSE00001319912.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124522.1";
mm10-chrY	HAVANA	transcript	54604825	54607192	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000190435.1"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124523.1";
mm10-chrY	HAVANA	exon	54604825	54605012	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000190435.1"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-203"; exon_number 1; exon_id "ENSMUSE00001334622.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124523.1";
mm10-chrY	HAVANA	exon	54605502	54605683	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000190435.1"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-203"; exon_number 2; exon_id "ENSMUSE00001334219.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124523.1";
mm10-chrY	HAVANA	exon	54607124	54607192	.	+	.	gene_id "ENSMUSG00000101542.6"; transcript_id "ENSMUST00000190435.1"; gene_type "lincRNA"; gene_name "Gm29303"; transcript_type "lincRNA"; transcript_name "Gm29303-203"; exon_number 3; exon_id "ENSMUSE00001319912.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048612.1"; havana_transcript "OTTMUST00000124523.1";
mm10-chrY	HAVANA	gene	54656882	54680980	.	+	.	gene_id "ENSMUSG00000096518.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21894"; level 2; havana_gene "OTTMUSG00000048613.1";
mm10-chrY	HAVANA	transcript	54656882	54680980	.	+	.	gene_id "ENSMUSG00000096518.2"; transcript_id "ENSMUST00000179631.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21894"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21894-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048613.1"; havana_transcript "OTTMUST00000124524.1";
mm10-chrY	HAVANA	exon	54656882	54656999	.	+	.	gene_id "ENSMUSG00000096518.2"; transcript_id "ENSMUST00000179631.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21894"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21894-201"; exon_number 1; exon_id "ENSMUSE00001072843.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048613.1"; havana_transcript "OTTMUST00000124524.1";
mm10-chrY	HAVANA	exon	54662336	54662402	.	+	.	gene_id "ENSMUSG00000096518.2"; transcript_id "ENSMUST00000179631.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21894"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21894-201"; exon_number 2; exon_id "ENSMUSE00001029249.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048613.1"; havana_transcript "OTTMUST00000124524.1";
mm10-chrY	HAVANA	exon	54663064	54663098	.	+	.	gene_id "ENSMUSG00000096518.2"; transcript_id "ENSMUST00000179631.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21894"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21894-201"; exon_number 3; exon_id "ENSMUSE00001067452.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048613.1"; havana_transcript "OTTMUST00000124524.1";
mm10-chrY	HAVANA	exon	54670100	54670166	.	+	.	gene_id "ENSMUSG00000096518.2"; transcript_id "ENSMUST00000179631.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21894"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21894-201"; exon_number 4; exon_id "ENSMUSE00001002917.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048613.1"; havana_transcript "OTTMUST00000124524.1";
mm10-chrY	HAVANA	exon	54670750	54670784	.	+	.	gene_id "ENSMUSG00000096518.2"; transcript_id "ENSMUST00000179631.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21894"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21894-201"; exon_number 5; exon_id "ENSMUSE00000989367.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048613.1"; havana_transcript "OTTMUST00000124524.1";
mm10-chrY	HAVANA	exon	54677956	54678073	.	+	.	gene_id "ENSMUSG00000096518.2"; transcript_id "ENSMUST00000179631.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21894"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21894-201"; exon_number 6; exon_id "ENSMUSE00001023793.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048613.1"; havana_transcript "OTTMUST00000124524.1";
mm10-chrY	HAVANA	exon	54678839	54678939	.	+	.	gene_id "ENSMUSG00000096518.2"; transcript_id "ENSMUST00000179631.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21894"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21894-201"; exon_number 7; exon_id "ENSMUSE00001043503.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048613.1"; havana_transcript "OTTMUST00000124524.1";
mm10-chrY	HAVANA	exon	54680976	54680980	.	+	.	gene_id "ENSMUSG00000096518.2"; transcript_id "ENSMUST00000179631.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21894"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21894-201"; exon_number 8; exon_id "ENSMUSE00001334296.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048613.1"; havana_transcript "OTTMUST00000124524.1";
mm10-chrY	HAVANA	gene	54741985	54742680	.	-	.	gene_id "ENSMUSG00000099509.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29307"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048614.1";
mm10-chrY	HAVANA	transcript	54741985	54742680	.	-	.	gene_id "ENSMUSG00000099509.1"; transcript_id "ENSMUST00000187367.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29307"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29307-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048614.1"; havana_transcript "OTTMUST00000124525.1";
mm10-chrY	HAVANA	exon	54741985	54742680	.	-	.	gene_id "ENSMUSG00000099509.1"; transcript_id "ENSMUST00000187367.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29307"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29307-201"; exon_number 1; exon_id "ENSMUSE00001334875.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048614.1"; havana_transcript "OTTMUST00000124525.1";
mm10-chrY	HAVANA	gene	54819758	54820616	.	+	.	gene_id "ENSMUSG00000100424.1"; gene_type "lincRNA"; gene_name "Gm29557"; level 2; havana_gene "OTTMUSG00000048640.1";
mm10-chrY	HAVANA	transcript	54819758	54820616	.	+	.	gene_id "ENSMUSG00000100424.1"; transcript_id "ENSMUST00000188245.1"; gene_type "lincRNA"; gene_name "Gm29557"; transcript_type "lincRNA"; transcript_name "Gm29557-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048640.1"; havana_transcript "OTTMUST00000124580.1";
mm10-chrY	HAVANA	exon	54819758	54819943	.	+	.	gene_id "ENSMUSG00000100424.1"; transcript_id "ENSMUST00000188245.1"; gene_type "lincRNA"; gene_name "Gm29557"; transcript_type "lincRNA"; transcript_name "Gm29557-201"; exon_number 1; exon_id "ENSMUSE00001327479.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048640.1"; havana_transcript "OTTMUST00000124580.1";
mm10-chrY	HAVANA	exon	54820433	54820616	.	+	.	gene_id "ENSMUSG00000100424.1"; transcript_id "ENSMUST00000188245.1"; gene_type "lincRNA"; gene_name "Gm29557"; transcript_type "lincRNA"; transcript_name "Gm29557-201"; exon_number 2; exon_id "ENSMUSE00001326965.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048640.1"; havana_transcript "OTTMUST00000124580.1";
mm10-chrY	ENSEMBL	gene	54928997	54929104	.	-	.	gene_id "ENSMUSG00000095985.1"; gene_type "rRNA"; gene_name "Gm23052"; level 3;
mm10-chrY	ENSEMBL	transcript	54928997	54929104	.	-	.	gene_id "ENSMUSG00000095985.1"; transcript_id "ENSMUST00000178633.1"; gene_type "rRNA"; gene_name "Gm23052"; transcript_type "rRNA"; transcript_name "Gm23052-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	54928997	54929104	.	-	.	gene_id "ENSMUSG00000095985.1"; transcript_id "ENSMUST00000178633.1"; gene_type "rRNA"; gene_name "Gm23052"; transcript_type "rRNA"; transcript_name "Gm23052-201"; exon_number 1; exon_id "ENSMUSE00000975321.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	54968742	54969437	.	-	.	gene_id "ENSMUSG00000101490.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20927"; level 2; havana_gene "OTTMUSG00000048615.1";
mm10-chrY	HAVANA	transcript	54968742	54969437	.	-	.	gene_id "ENSMUSG00000101490.1"; transcript_id "ENSMUST00000186168.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20927"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20927-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048615.1"; havana_transcript "OTTMUST00000124526.1";
mm10-chrY	HAVANA	exon	54968742	54969437	.	-	.	gene_id "ENSMUSG00000101490.1"; transcript_id "ENSMUST00000186168.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20927"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20927-201"; exon_number 1; exon_id "ENSMUSE00001322973.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048615.1"; havana_transcript "OTTMUST00000124526.1";
mm10-chrY	HAVANA	gene	55043309	55044004	.	-	.	gene_id "ENSMUSG00000099993.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20930"; level 2; havana_gene "OTTMUSG00000048616.1";
mm10-chrY	HAVANA	transcript	55043309	55044004	.	-	.	gene_id "ENSMUSG00000099993.1"; transcript_id "ENSMUST00000186998.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20930"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20930-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048616.1"; havana_transcript "OTTMUST00000124527.1";
mm10-chrY	HAVANA	exon	55043309	55044004	.	-	.	gene_id "ENSMUSG00000099993.1"; transcript_id "ENSMUST00000186998.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20930"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20930-201"; exon_number 1; exon_id "ENSMUSE00001332545.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048616.1"; havana_transcript "OTTMUST00000124527.1";
mm10-chrY	HAVANA	gene	55072993	55073607	.	-	.	gene_id "ENSMUSG00000101534.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29306"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048617.1";
mm10-chrY	HAVANA	transcript	55072993	55073607	.	-	.	gene_id "ENSMUSG00000101534.1"; transcript_id "ENSMUST00000191366.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29306"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29306-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048617.1"; havana_transcript "OTTMUST00000124528.1";
mm10-chrY	HAVANA	exon	55072993	55073607	.	-	.	gene_id "ENSMUSG00000101534.1"; transcript_id "ENSMUST00000191366.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29306"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29306-201"; exon_number 1; exon_id "ENSMUSE00001331368.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048617.1"; havana_transcript "OTTMUST00000124528.1";
mm10-chrY	HAVANA	gene	55109869	55110564	.	-	.	gene_id "ENSMUSG00000101364.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29300"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048618.1";
mm10-chrY	HAVANA	transcript	55109869	55110564	.	-	.	gene_id "ENSMUSG00000101364.1"; transcript_id "ENSMUST00000190738.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29300"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29300-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048618.1"; havana_transcript "OTTMUST00000124529.1";
mm10-chrY	HAVANA	exon	55109869	55110564	.	-	.	gene_id "ENSMUSG00000101364.1"; transcript_id "ENSMUST00000190738.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29300"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29300-201"; exon_number 1; exon_id "ENSMUSE00001332405.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048618.1"; havana_transcript "OTTMUST00000124529.1";
mm10-chrY	HAVANA	gene	55151575	55154817	.	+	.	gene_id "ENSMUSG00000101422.6"; gene_type "lincRNA"; gene_name "Gm29301"; level 2; havana_gene "OTTMUSG00000048619.1";
mm10-chrY	HAVANA	transcript	55151575	55154817	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000189344.6"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124530.1";
mm10-chrY	HAVANA	exon	55151575	55152214	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000189344.6"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-202"; exon_number 1; exon_id "ENSMUSE00001322060.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124530.1";
mm10-chrY	HAVANA	exon	55152700	55152885	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000189344.6"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-202"; exon_number 2; exon_id "ENSMUSE00001319348.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124530.1";
mm10-chrY	HAVANA	exon	55153615	55153798	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000189344.6"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-202"; exon_number 3; exon_id "ENSMUSE00001332091.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124530.1";
mm10-chrY	HAVANA	exon	55154326	55154817	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000189344.6"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-202"; exon_number 4; exon_id "ENSMUSE00001333426.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124530.1";
mm10-chrY	HAVANA	transcript	55152028	55154394	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000187383.6"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124531.1";
mm10-chrY	HAVANA	exon	55152028	55152214	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000187383.6"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-201"; exon_number 1; exon_id "ENSMUSE00001335939.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124531.1";
mm10-chrY	HAVANA	exon	55152704	55152885	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000187383.6"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-201"; exon_number 2; exon_id "ENSMUSE00001323503.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124531.1";
mm10-chrY	HAVANA	exon	55153615	55153798	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000187383.6"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-201"; exon_number 3; exon_id "ENSMUSE00001332091.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124531.1";
mm10-chrY	HAVANA	exon	55154326	55154394	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000187383.6"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-201"; exon_number 4; exon_id "ENSMUSE00001319520.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124531.1";
mm10-chrY	HAVANA	transcript	55152028	55154394	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000190850.1"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124532.1";
mm10-chrY	HAVANA	exon	55152028	55152214	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000190850.1"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-203"; exon_number 1; exon_id "ENSMUSE00001335939.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124532.1";
mm10-chrY	HAVANA	exon	55152704	55152885	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000190850.1"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-203"; exon_number 2; exon_id "ENSMUSE00001323503.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124532.1";
mm10-chrY	HAVANA	exon	55154326	55154394	.	+	.	gene_id "ENSMUSG00000101422.6"; transcript_id "ENSMUST00000190850.1"; gene_type "lincRNA"; gene_name "Gm29301"; transcript_type "lincRNA"; transcript_name "Gm29301-203"; exon_number 3; exon_id "ENSMUSE00001319520.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048619.1"; havana_transcript "OTTMUST00000124532.1";
mm10-chrY	HAVANA	gene	55213720	55239871	.	+	.	gene_id "ENSMUSG00000094570.7"; gene_type "protein_coding"; gene_name "Gm20931"; level 2; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	HAVANA	transcript	55213720	55239871	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	exon	55213720	55213763	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 1; exon_id "ENSMUSE00001323106.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	exon	55215130	55215261	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 2; exon_id "ENSMUSE00001325480.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	CDS	55215144	55215261	.	+	0	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 2; exon_id "ENSMUSE00001325480.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	start_codon	55215144	55215146	.	+	0	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 2; exon_id "ENSMUSE00001325480.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	exon	55220592	55220658	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 3; exon_id "ENSMUSE00000978582.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	CDS	55220592	55220658	.	+	2	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 3; exon_id "ENSMUSE00000978582.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	exon	55221312	55221346	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 4; exon_id "ENSMUSE00001044243.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	CDS	55221312	55221346	.	+	1	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 4; exon_id "ENSMUSE00001044243.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	exon	55228337	55228403	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 5; exon_id "ENSMUSE00000972402.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	CDS	55228337	55228403	.	+	2	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 5; exon_id "ENSMUSE00000972402.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	exon	55228980	55229014	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 6; exon_id "ENSMUSE00000984787.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	CDS	55228980	55229014	.	+	1	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 6; exon_id "ENSMUSE00000984787.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	exon	55236183	55236300	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 7; exon_id "ENSMUSE00001014070.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	CDS	55236183	55236300	.	+	2	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 7; exon_id "ENSMUSE00001014070.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	exon	55237060	55237159	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 8; exon_id "ENSMUSE00001327028.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	CDS	55237060	55237159	.	+	1	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 8; exon_id "ENSMUSE00001327028.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	exon	55239189	55239287	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 9; exon_id "ENSMUSE00001330157.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	CDS	55239189	55239287	.	+	0	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 9; exon_id "ENSMUSE00001330157.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	exon	55239647	55239871	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 10; exon_id "ENSMUSE00001327550.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	CDS	55239647	55239673	.	+	0	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 10; exon_id "ENSMUSE00001327550.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	stop_codon	55239674	55239676	.	+	0	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 10; exon_id "ENSMUSE00001327550.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	UTR	55213720	55213763	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 1; exon_id "ENSMUSE00001323106.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	UTR	55215130	55215143	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 2; exon_id "ENSMUSE00001325480.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	HAVANA	UTR	55239674	55239871	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000187293.6"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-202"; exon_number 10; exon_id "ENSMUSE00001327550.1"; level 2; protein_id "ENSMUSP00000140468.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048641.1"; havana_transcript "OTTMUST00000124581.1";
mm10-chrY	ENSEMBL	transcript	55215153	55237126	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	exon	55215153	55215261	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 1; exon_id "ENSMUSE00000963973.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	CDS	55215153	55215261	.	+	0	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 1; exon_id "ENSMUSE00000963973.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	start_codon	55215153	55215155	.	+	0	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 1; exon_id "ENSMUSE00000963973.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	exon	55220592	55220658	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 2; exon_id "ENSMUSE00000978582.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	CDS	55220592	55220658	.	+	2	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 2; exon_id "ENSMUSE00000978582.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	exon	55221312	55221346	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 3; exon_id "ENSMUSE00001044243.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	CDS	55221312	55221346	.	+	1	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 3; exon_id "ENSMUSE00001044243.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	exon	55228337	55228403	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 4; exon_id "ENSMUSE00000972402.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	CDS	55228337	55228403	.	+	2	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 4; exon_id "ENSMUSE00000972402.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	exon	55228980	55229014	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 5; exon_id "ENSMUSE00000984787.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	CDS	55228980	55229014	.	+	1	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 5; exon_id "ENSMUSE00000984787.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	exon	55236183	55236300	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 6; exon_id "ENSMUSE00001014070.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	CDS	55236183	55236300	.	+	2	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 6; exon_id "ENSMUSE00001014070.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	exon	55237060	55237126	.	+	.	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 7; exon_id "ENSMUSE00001031472.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	ENSEMBL	CDS	55237060	55237126	.	+	1	gene_id "ENSMUSG00000094570.7"; transcript_id "ENSMUST00000180249.1"; gene_type "protein_coding"; gene_name "Gm20931"; transcript_type "protein_coding"; transcript_name "Gm20931-201"; exon_number 7; exon_id "ENSMUSE00001031472.1"; level 3; protein_id "ENSMUSP00000137051.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048641.1";
mm10-chrY	HAVANA	gene	55300023	55300718	.	-	.	gene_id "ENSMUSG00000100488.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29559"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048642.1";
mm10-chrY	HAVANA	transcript	55300023	55300718	.	-	.	gene_id "ENSMUSG00000100488.1"; transcript_id "ENSMUST00000189412.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29559"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29559-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048642.1"; havana_transcript "OTTMUST00000124582.1";
mm10-chrY	HAVANA	exon	55300023	55300718	.	-	.	gene_id "ENSMUSG00000100488.1"; transcript_id "ENSMUST00000189412.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29559"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29559-201"; exon_number 1; exon_id "ENSMUSE00001321565.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048642.1"; havana_transcript "OTTMUST00000124582.1";
mm10-chrY	HAVANA	gene	55336978	55337352	.	-	.	gene_id "ENSMUSG00000100184.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29558"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048643.1";
mm10-chrY	HAVANA	transcript	55336978	55337352	.	-	.	gene_id "ENSMUSG00000100184.1"; transcript_id "ENSMUST00000190134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29558"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29558-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048643.1"; havana_transcript "OTTMUST00000124583.1";
mm10-chrY	HAVANA	exon	55336978	55337352	.	-	.	gene_id "ENSMUSG00000100184.1"; transcript_id "ENSMUST00000190134.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29558"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29558-201"; exon_number 1; exon_id "ENSMUSE00001331596.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048643.1"; havana_transcript "OTTMUST00000124583.1";
mm10-chrY	HAVANA	gene	55373936	55377172	.	+	.	gene_id "ENSMUSG00000101967.6"; gene_type "lincRNA"; gene_name "Gm29555"; level 2; havana_gene "OTTMUSG00000048644.1";
mm10-chrY	HAVANA	transcript	55373936	55377172	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000188620.6"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124584.1";
mm10-chrY	HAVANA	exon	55373936	55374573	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000188620.6"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-201"; exon_number 1; exon_id "ENSMUSE00001318265.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124584.1";
mm10-chrY	HAVANA	exon	55375059	55375244	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000188620.6"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-201"; exon_number 2; exon_id "ENSMUSE00001319743.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124584.1";
mm10-chrY	HAVANA	exon	55375974	55376157	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000188620.6"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-201"; exon_number 3; exon_id "ENSMUSE00001327155.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124584.1";
mm10-chrY	HAVANA	exon	55376684	55377172	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000188620.6"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-201"; exon_number 4; exon_id "ENSMUSE00001330125.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124584.1";
mm10-chrY	HAVANA	transcript	55374388	55376748	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000190886.6"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124585.1";
mm10-chrY	HAVANA	exon	55374388	55374573	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000190886.6"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-202"; exon_number 1; exon_id "ENSMUSE00001318291.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124585.1";
mm10-chrY	HAVANA	exon	55375063	55375244	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000190886.6"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-202"; exon_number 2; exon_id "ENSMUSE00001331798.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124585.1";
mm10-chrY	HAVANA	exon	55375974	55376157	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000190886.6"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-202"; exon_number 3; exon_id "ENSMUSE00001327155.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124585.1";
mm10-chrY	HAVANA	exon	55376684	55376748	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000190886.6"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-202"; exon_number 4; exon_id "ENSMUSE00001321169.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124585.1";
mm10-chrY	HAVANA	transcript	55374388	55376748	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000191314.1"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124586.1";
mm10-chrY	HAVANA	exon	55374388	55374573	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000191314.1"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-203"; exon_number 1; exon_id "ENSMUSE00001318291.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124586.1";
mm10-chrY	HAVANA	exon	55375063	55375244	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000191314.1"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-203"; exon_number 2; exon_id "ENSMUSE00001331798.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124586.1";
mm10-chrY	HAVANA	exon	55376684	55376748	.	+	.	gene_id "ENSMUSG00000101967.6"; transcript_id "ENSMUST00000191314.1"; gene_type "lincRNA"; gene_name "Gm29555"; transcript_type "lincRNA"; transcript_name "Gm29555-203"; exon_number 3; exon_id "ENSMUSE00001321169.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048644.1"; havana_transcript "OTTMUST00000124586.1";
mm10-chrY	HAVANA	gene	55483291	55483986	.	-	.	gene_id "ENSMUSG00000102035.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21733"; level 2; havana_gene "OTTMUSG00000048663.1";
mm10-chrY	HAVANA	transcript	55483291	55483986	.	-	.	gene_id "ENSMUSG00000102035.1"; transcript_id "ENSMUST00000185670.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21733"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21733-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048663.1"; havana_transcript "OTTMUST00000124637.1";
mm10-chrY	HAVANA	exon	55483291	55483986	.	-	.	gene_id "ENSMUSG00000102035.1"; transcript_id "ENSMUST00000185670.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21733"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21733-201"; exon_number 1; exon_id "ENSMUSE00001334416.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048663.1"; havana_transcript "OTTMUST00000124637.1";
mm10-chrY	HAVANA	gene	55557648	55558343	.	-	.	gene_id "ENSMUSG00000101228.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21330"; level 2; havana_gene "OTTMUSG00000048664.1";
mm10-chrY	HAVANA	transcript	55557648	55558343	.	-	.	gene_id "ENSMUSG00000101228.1"; transcript_id "ENSMUST00000186881.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21330"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21330-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048664.1"; havana_transcript "OTTMUST00000124638.1";
mm10-chrY	HAVANA	exon	55557648	55558343	.	-	.	gene_id "ENSMUSG00000101228.1"; transcript_id "ENSMUST00000186881.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21330"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21330-201"; exon_number 1; exon_id "ENSMUSE00001323288.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048664.1"; havana_transcript "OTTMUST00000124638.1";
mm10-chrY	HAVANA	gene	55574640	55576183	.	+	.	gene_id "ENSMUSG00000101723.1"; gene_type "lincRNA"; gene_name "Gm28355"; level 2; havana_gene "OTTMUSG00000048665.1";
mm10-chrY	HAVANA	transcript	55574640	55576183	.	+	.	gene_id "ENSMUSG00000101723.1"; transcript_id "ENSMUST00000187443.1"; gene_type "lincRNA"; gene_name "Gm28355"; transcript_type "lincRNA"; transcript_name "Gm28355-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048665.1"; havana_transcript "OTTMUST00000124639.1";
mm10-chrY	HAVANA	exon	55574640	55574857	.	+	.	gene_id "ENSMUSG00000101723.1"; transcript_id "ENSMUST00000187443.1"; gene_type "lincRNA"; gene_name "Gm28355"; transcript_type "lincRNA"; transcript_name "Gm28355-201"; exon_number 1; exon_id "ENSMUSE00001329295.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048665.1"; havana_transcript "OTTMUST00000124639.1";
mm10-chrY	HAVANA	exon	55576046	55576183	.	+	.	gene_id "ENSMUSG00000101723.1"; transcript_id "ENSMUST00000187443.1"; gene_type "lincRNA"; gene_name "Gm28355"; transcript_type "lincRNA"; transcript_name "Gm28355-201"; exon_number 2; exon_id "ENSMUSE00001327434.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048665.1"; havana_transcript "OTTMUST00000124639.1";
mm10-chrY	HAVANA	gene	55587284	55587961	.	-	.	gene_id "ENSMUSG00000102056.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28354"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048666.1";
mm10-chrY	HAVANA	transcript	55587284	55587961	.	-	.	gene_id "ENSMUSG00000102056.1"; transcript_id "ENSMUST00000190904.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28354"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28354-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048666.1"; havana_transcript "OTTMUST00000124640.1";
mm10-chrY	HAVANA	exon	55587284	55587961	.	-	.	gene_id "ENSMUSG00000102056.1"; transcript_id "ENSMUST00000190904.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28354"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28354-201"; exon_number 1; exon_id "ENSMUSE00001323286.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048666.1"; havana_transcript "OTTMUST00000124640.1";
mm10-chrY	HAVANA	gene	55624376	55624945	.	-	.	gene_id "ENSMUSG00000100052.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28353"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048667.1";
mm10-chrY	HAVANA	transcript	55624376	55624945	.	-	.	gene_id "ENSMUSG00000100052.1"; transcript_id "ENSMUST00000186482.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28353"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28353-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048667.1"; havana_transcript "OTTMUST00000124641.1";
mm10-chrY	HAVANA	exon	55624376	55624945	.	-	.	gene_id "ENSMUSG00000100052.1"; transcript_id "ENSMUST00000186482.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28353"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28353-201"; exon_number 1; exon_id "ENSMUSE00001326503.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048667.1"; havana_transcript "OTTMUST00000124641.1";
mm10-chrY	HAVANA	gene	55630825	55634171	.	-	.	gene_id "ENSMUSG00000099442.1"; gene_type "lincRNA"; gene_name "Gm28352"; level 2; havana_gene "OTTMUSG00000048668.1";
mm10-chrY	HAVANA	transcript	55630825	55634171	.	-	.	gene_id "ENSMUSG00000099442.1"; transcript_id "ENSMUST00000186654.1"; gene_type "lincRNA"; gene_name "Gm28352"; transcript_type "lincRNA"; transcript_name "Gm28352-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048668.1"; havana_transcript "OTTMUST00000124642.1";
mm10-chrY	HAVANA	exon	55633949	55634171	.	-	.	gene_id "ENSMUSG00000099442.1"; transcript_id "ENSMUST00000186654.1"; gene_type "lincRNA"; gene_name "Gm28352"; transcript_type "lincRNA"; transcript_name "Gm28352-201"; exon_number 1; exon_id "ENSMUSE00001334526.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048668.1"; havana_transcript "OTTMUST00000124642.1";
mm10-chrY	HAVANA	exon	55630825	55632768	.	-	.	gene_id "ENSMUSG00000099442.1"; transcript_id "ENSMUST00000186654.1"; gene_type "lincRNA"; gene_name "Gm28352"; transcript_type "lincRNA"; transcript_name "Gm28352-201"; exon_number 2; exon_id "ENSMUSE00001323764.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048668.1"; havana_transcript "OTTMUST00000124642.1";
mm10-chrY	HAVANA	gene	55731756	55757908	.	+	.	gene_id "ENSMUSG00000095135.7"; gene_type "protein_coding"; gene_name "Gm21858"; level 2; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	HAVANA	transcript	55731756	55757908	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	exon	55731756	55731799	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 1; exon_id "ENSMUSE00001335807.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	exon	55733165	55733296	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 2; exon_id "ENSMUSE00001321201.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	CDS	55733179	55733296	.	+	0	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 2; exon_id "ENSMUSE00001321201.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	start_codon	55733179	55733181	.	+	0	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 2; exon_id "ENSMUSE00001321201.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	exon	55738628	55738694	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 3; exon_id "ENSMUSE00001077389.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	CDS	55738628	55738694	.	+	2	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 3; exon_id "ENSMUSE00001077389.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	exon	55739323	55739357	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 4; exon_id "ENSMUSE00000967955.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	CDS	55739323	55739357	.	+	1	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 4; exon_id "ENSMUSE00000967955.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	exon	55746392	55746458	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 5; exon_id "ENSMUSE00001049842.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	CDS	55746392	55746458	.	+	2	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 5; exon_id "ENSMUSE00001049842.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	exon	55747042	55747076	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 6; exon_id "ENSMUSE00000972672.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	CDS	55747042	55747076	.	+	1	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 6; exon_id "ENSMUSE00000972672.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	exon	55754231	55754348	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 7; exon_id "ENSMUSE00001036821.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	CDS	55754231	55754348	.	+	2	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 7; exon_id "ENSMUSE00001036821.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	exon	55755090	55755189	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 8; exon_id "ENSMUSE00001327029.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	CDS	55755090	55755189	.	+	1	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 8; exon_id "ENSMUSE00001327029.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	exon	55757225	55757323	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 9; exon_id "ENSMUSE00001321509.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	CDS	55757225	55757323	.	+	0	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 9; exon_id "ENSMUSE00001321509.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	exon	55757683	55757908	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 10; exon_id "ENSMUSE00001326689.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	CDS	55757683	55757709	.	+	0	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 10; exon_id "ENSMUSE00001326689.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	stop_codon	55757710	55757712	.	+	0	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 10; exon_id "ENSMUSE00001326689.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	UTR	55731756	55731799	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 1; exon_id "ENSMUSE00001335807.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	UTR	55733165	55733178	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 2; exon_id "ENSMUSE00001321201.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	HAVANA	UTR	55757710	55757908	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000185713.6"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-202"; exon_number 10; exon_id "ENSMUSE00001326689.1"; level 2; protein_id "ENSMUSP00000140010.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000048669.1"; havana_transcript "OTTMUST00000124643.1";
mm10-chrY	ENSEMBL	transcript	55733188	55755156	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	exon	55733188	55733296	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 1; exon_id "ENSMUSE00000996054.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	CDS	55733188	55733296	.	+	0	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 1; exon_id "ENSMUSE00000996054.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	start_codon	55733188	55733190	.	+	0	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 1; exon_id "ENSMUSE00000996054.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	exon	55738628	55738694	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 2; exon_id "ENSMUSE00001077389.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	CDS	55738628	55738694	.	+	2	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 2; exon_id "ENSMUSE00001077389.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	exon	55739323	55739357	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 3; exon_id "ENSMUSE00000967955.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	CDS	55739323	55739357	.	+	1	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 3; exon_id "ENSMUSE00000967955.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	exon	55746392	55746458	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 4; exon_id "ENSMUSE00001049842.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	CDS	55746392	55746458	.	+	2	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 4; exon_id "ENSMUSE00001049842.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	exon	55747042	55747076	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 5; exon_id "ENSMUSE00000972672.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	CDS	55747042	55747076	.	+	1	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 5; exon_id "ENSMUSE00000972672.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	exon	55754231	55754348	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 6; exon_id "ENSMUSE00001036821.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	CDS	55754231	55754348	.	+	2	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 6; exon_id "ENSMUSE00001036821.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	exon	55755090	55755156	.	+	.	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 7; exon_id "ENSMUSE00001030882.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	ENSEMBL	CDS	55755090	55755156	.	+	1	gene_id "ENSMUSG00000095135.7"; transcript_id "ENSMUST00000177834.1"; gene_type "protein_coding"; gene_name "Gm21858"; transcript_type "protein_coding"; transcript_name "Gm21858-201"; exon_number 7; exon_id "ENSMUSE00001030882.1"; level 3; protein_id "ENSMUSP00000135983.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048669.1";
mm10-chrY	HAVANA	gene	55767560	55768255	.	-	.	gene_id "ENSMUSG00000100195.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29244"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048699.1";
mm10-chrY	HAVANA	transcript	55767560	55768255	.	-	.	gene_id "ENSMUSG00000100195.1"; transcript_id "ENSMUST00000185825.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29244"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29244-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048699.1"; havana_transcript "OTTMUST00000124699.1";
mm10-chrY	HAVANA	exon	55767560	55768255	.	-	.	gene_id "ENSMUSG00000100195.1"; transcript_id "ENSMUST00000185825.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29244"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29244-201"; exon_number 1; exon_id "ENSMUSE00001333588.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048699.1"; havana_transcript "OTTMUST00000124699.1";
mm10-chrY	HAVANA	gene	55796060	55796374	.	-	.	gene_id "ENSMUSG00000101148.1"; gene_type "processed_pseudogene"; gene_name "Gm28200"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048700.1";
mm10-chrY	HAVANA	transcript	55796060	55796374	.	-	.	gene_id "ENSMUSG00000101148.1"; transcript_id "ENSMUST00000187778.1"; gene_type "processed_pseudogene"; gene_name "Gm28200"; transcript_type "processed_pseudogene"; transcript_name "Gm28200-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048700.1"; havana_transcript "OTTMUST00000124700.1";
mm10-chrY	HAVANA	exon	55796060	55796374	.	-	.	gene_id "ENSMUSG00000101148.1"; transcript_id "ENSMUST00000187778.1"; gene_type "processed_pseudogene"; gene_name "Gm28200"; transcript_type "processed_pseudogene"; transcript_name "Gm28200-201"; exon_number 1; exon_id "ENSMUSE00001329656.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048700.1"; havana_transcript "OTTMUST00000124700.1";
mm10-chrY	HAVANA	gene	55797791	55801133	.	-	.	gene_id "ENSMUSG00000101580.1"; gene_type "lincRNA"; gene_name "Gm28201"; level 2; havana_gene "OTTMUSG00000048701.1";
mm10-chrY	HAVANA	transcript	55797791	55801133	.	-	.	gene_id "ENSMUSG00000101580.1"; transcript_id "ENSMUST00000189989.1"; gene_type "lincRNA"; gene_name "Gm28201"; transcript_type "lincRNA"; transcript_name "Gm28201-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048701.1"; havana_transcript "OTTMUST00000124701.1";
mm10-chrY	HAVANA	exon	55800911	55801133	.	-	.	gene_id "ENSMUSG00000101580.1"; transcript_id "ENSMUST00000189989.1"; gene_type "lincRNA"; gene_name "Gm28201"; transcript_type "lincRNA"; transcript_name "Gm28201-201"; exon_number 1; exon_id "ENSMUSE00001327890.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048701.1"; havana_transcript "OTTMUST00000124701.1";
mm10-chrY	HAVANA	exon	55797791	55799733	.	-	.	gene_id "ENSMUSG00000101580.1"; transcript_id "ENSMUST00000189989.1"; gene_type "lincRNA"; gene_name "Gm28201"; transcript_type "lincRNA"; transcript_name "Gm28201-201"; exon_number 2; exon_id "ENSMUSE00001320044.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000048701.1"; havana_transcript "OTTMUST00000124701.1";
mm10-chrY	HAVANA	gene	55833464	55836360	.	+	.	gene_id "ENSMUSG00000100054.6"; gene_type "lincRNA"; gene_name "Gm28202"; level 2; havana_gene "OTTMUSG00000048702.1";
mm10-chrY	HAVANA	transcript	55833464	55836360	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000189780.6"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124702.1";
mm10-chrY	HAVANA	exon	55833464	55833758	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000189780.6"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-203"; exon_number 1; exon_id "ENSMUSE00001320717.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124702.1";
mm10-chrY	HAVANA	exon	55834244	55834429	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000189780.6"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-203"; exon_number 2; exon_id "ENSMUSE00001331365.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124702.1";
mm10-chrY	HAVANA	exon	55835159	55835342	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000189780.6"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-203"; exon_number 3; exon_id "ENSMUSE00001322061.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124702.1";
mm10-chrY	HAVANA	exon	55835869	55836360	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000189780.6"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-203"; exon_number 4; exon_id "ENSMUSE00001326030.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124702.1";
mm10-chrY	HAVANA	transcript	55833573	55835933	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000187604.6"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124703.1";
mm10-chrY	HAVANA	exon	55833573	55833758	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000187604.6"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-201"; exon_number 1; exon_id "ENSMUSE00001324794.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124703.1";
mm10-chrY	HAVANA	exon	55834248	55834429	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000187604.6"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-201"; exon_number 2; exon_id "ENSMUSE00001332293.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124703.1";
mm10-chrY	HAVANA	exon	55835869	55835933	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000187604.6"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-201"; exon_number 3; exon_id "ENSMUSE00001324830.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124703.1";
mm10-chrY	HAVANA	transcript	55833573	55835933	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000188183.1"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124704.1";
mm10-chrY	HAVANA	exon	55833573	55833758	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000188183.1"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-202"; exon_number 1; exon_id "ENSMUSE00001324794.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124704.1";
mm10-chrY	HAVANA	exon	55834248	55834429	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000188183.1"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-202"; exon_number 2; exon_id "ENSMUSE00001332293.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124704.1";
mm10-chrY	HAVANA	exon	55835159	55835342	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000188183.1"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-202"; exon_number 3; exon_id "ENSMUSE00001322061.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124704.1";
mm10-chrY	HAVANA	exon	55835869	55835933	.	+	.	gene_id "ENSMUSG00000100054.6"; transcript_id "ENSMUST00000188183.1"; gene_type "lincRNA"; gene_name "Gm28202"; transcript_type "lincRNA"; transcript_name "Gm28202-202"; exon_number 4; exon_id "ENSMUSE00001324830.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048702.1"; havana_transcript "OTTMUST00000124704.1";
mm10-chrY	HAVANA	gene	55943933	55944627	.	-	.	gene_id "ENSMUSG00000100207.1"; gene_type "processed_pseudogene"; gene_name "Gm28203"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048703.1";
mm10-chrY	HAVANA	transcript	55943933	55944627	.	-	.	gene_id "ENSMUSG00000100207.1"; transcript_id "ENSMUST00000190672.1"; gene_type "processed_pseudogene"; gene_name "Gm28203"; transcript_type "processed_pseudogene"; transcript_name "Gm28203-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048703.1"; havana_transcript "OTTMUST00000124705.1";
mm10-chrY	HAVANA	exon	55943933	55944627	.	-	.	gene_id "ENSMUSG00000100207.1"; transcript_id "ENSMUST00000190672.1"; gene_type "processed_pseudogene"; gene_name "Gm28203"; transcript_type "processed_pseudogene"; transcript_name "Gm28203-201"; exon_number 1; exon_id "ENSMUSE00001334125.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048703.1"; havana_transcript "OTTMUST00000124705.1";
mm10-chrY	HAVANA	gene	56018223	56018918	.	-	.	gene_id "ENSMUSG00000100142.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21340"; level 2; havana_gene "OTTMUSG00000048704.1";
mm10-chrY	HAVANA	transcript	56018223	56018918	.	-	.	gene_id "ENSMUSG00000100142.1"; transcript_id "ENSMUST00000188010.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21340"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21340-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048704.1"; havana_transcript "OTTMUST00000124706.1";
mm10-chrY	HAVANA	exon	56018223	56018918	.	-	.	gene_id "ENSMUSG00000100142.1"; transcript_id "ENSMUST00000188010.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21340"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21340-201"; exon_number 1; exon_id "ENSMUSE00001333743.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048704.1"; havana_transcript "OTTMUST00000124706.1";
mm10-chrY	HAVANA	gene	56047994	56048607	.	-	.	gene_id "ENSMUSG00000100889.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28204"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048705.1";
mm10-chrY	HAVANA	transcript	56047994	56048607	.	-	.	gene_id "ENSMUSG00000100889.1"; transcript_id "ENSMUST00000185934.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28204"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28204-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048705.1"; havana_transcript "OTTMUST00000124707.1";
mm10-chrY	HAVANA	exon	56047994	56048607	.	-	.	gene_id "ENSMUSG00000100889.1"; transcript_id "ENSMUST00000185934.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28204"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28204-201"; exon_number 1; exon_id "ENSMUSE00001321216.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048705.1"; havana_transcript "OTTMUST00000124707.1";
mm10-chrY	HAVANA	gene	56084836	56085532	.	-	.	gene_id "ENSMUSG00000099607.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28205"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048706.1";
mm10-chrY	HAVANA	transcript	56084836	56085532	.	-	.	gene_id "ENSMUSG00000099607.1"; transcript_id "ENSMUST00000189177.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28205"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28205-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048706.1"; havana_transcript "OTTMUST00000124708.1";
mm10-chrY	HAVANA	exon	56084836	56085532	.	-	.	gene_id "ENSMUSG00000099607.1"; transcript_id "ENSMUST00000189177.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28205"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28205-201"; exon_number 1; exon_id "ENSMUSE00001319915.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048706.1"; havana_transcript "OTTMUST00000124708.1";
mm10-chrY	HAVANA	gene	56091402	56094749	.	-	.	gene_id "ENSMUSG00000100242.1"; gene_type "lincRNA"; gene_name "Gm28206"; level 2; havana_gene "OTTMUSG00000048707.1";
mm10-chrY	HAVANA	transcript	56091402	56094749	.	-	.	gene_id "ENSMUSG00000100242.1"; transcript_id "ENSMUST00000190437.1"; gene_type "lincRNA"; gene_name "Gm28206"; transcript_type "lincRNA"; transcript_name "Gm28206-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048707.1"; havana_transcript "OTTMUST00000124709.1";
mm10-chrY	HAVANA	exon	56094527	56094749	.	-	.	gene_id "ENSMUSG00000100242.1"; transcript_id "ENSMUST00000190437.1"; gene_type "lincRNA"; gene_name "Gm28206"; transcript_type "lincRNA"; transcript_name "Gm28206-201"; exon_number 1; exon_id "ENSMUSE00001326837.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048707.1"; havana_transcript "OTTMUST00000124709.1";
mm10-chrY	HAVANA	exon	56091402	56093347	.	-	.	gene_id "ENSMUSG00000100242.1"; transcript_id "ENSMUST00000190437.1"; gene_type "lincRNA"; gene_name "Gm28206"; transcript_type "lincRNA"; transcript_name "Gm28206-201"; exon_number 2; exon_id "ENSMUSE00001332506.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048707.1"; havana_transcript "OTTMUST00000124709.1";
mm10-chrY	HAVANA	gene	56125273	56128511	.	+	.	gene_id "ENSMUSG00000100167.6"; gene_type "lincRNA"; gene_name "Gm28207"; level 2; havana_gene "OTTMUSG00000048708.1";
mm10-chrY	HAVANA	transcript	56125273	56128511	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187419.6"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124710.1";
mm10-chrY	HAVANA	exon	56125273	56125911	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187419.6"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-202"; exon_number 1; exon_id "ENSMUSE00001320045.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124710.1";
mm10-chrY	HAVANA	exon	56126397	56126582	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187419.6"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-202"; exon_number 2; exon_id "ENSMUSE00001331988.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124710.1";
mm10-chrY	HAVANA	exon	56127312	56127495	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187419.6"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-202"; exon_number 3; exon_id "ENSMUSE00001319813.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124710.1";
mm10-chrY	HAVANA	exon	56128023	56128511	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187419.6"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-202"; exon_number 4; exon_id "ENSMUSE00001325081.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124710.1";
mm10-chrY	HAVANA	transcript	56125725	56128091	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187260.6"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124711.1";
mm10-chrY	HAVANA	exon	56125725	56125911	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187260.6"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-201"; exon_number 1; exon_id "ENSMUSE00001332321.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124711.1";
mm10-chrY	HAVANA	exon	56126401	56126582	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187260.6"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-201"; exon_number 2; exon_id "ENSMUSE00001322550.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124711.1";
mm10-chrY	HAVANA	exon	56128023	56128091	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187260.6"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-201"; exon_number 3; exon_id "ENSMUSE00001320618.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124711.1";
mm10-chrY	HAVANA	transcript	56125725	56128091	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187657.1"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124712.1";
mm10-chrY	HAVANA	exon	56125725	56125911	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187657.1"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-203"; exon_number 1; exon_id "ENSMUSE00001332321.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124712.1";
mm10-chrY	HAVANA	exon	56126401	56126582	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187657.1"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-203"; exon_number 2; exon_id "ENSMUSE00001322550.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124712.1";
mm10-chrY	HAVANA	exon	56127312	56127495	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187657.1"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-203"; exon_number 3; exon_id "ENSMUSE00001319813.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124712.1";
mm10-chrY	HAVANA	exon	56128023	56128091	.	+	.	gene_id "ENSMUSG00000100167.6"; transcript_id "ENSMUST00000187657.1"; gene_type "lincRNA"; gene_name "Gm28207"; transcript_type "lincRNA"; transcript_name "Gm28207-203"; exon_number 4; exon_id "ENSMUSE00001320618.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048708.1"; havana_transcript "OTTMUST00000124712.1";
mm10-chrY	HAVANA	gene	56166623	56169519	.	+	.	gene_id "ENSMUSG00000100144.6"; gene_type "lincRNA"; gene_name "Gm28208"; level 2; havana_gene "OTTMUSG00000048709.1";
mm10-chrY	HAVANA	transcript	56166623	56169519	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000185941.6"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124713.1";
mm10-chrY	HAVANA	exon	56166623	56166917	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000185941.6"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-201"; exon_number 1; exon_id "ENSMUSE00001333466.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124713.1";
mm10-chrY	HAVANA	exon	56167403	56167588	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000185941.6"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-201"; exon_number 2; exon_id "ENSMUSE00001318453.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124713.1";
mm10-chrY	HAVANA	exon	56168318	56168501	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000185941.6"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-201"; exon_number 3; exon_id "ENSMUSE00001320561.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124713.1";
mm10-chrY	HAVANA	exon	56169028	56169519	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000185941.6"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-201"; exon_number 4; exon_id "ENSMUSE00001324322.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124713.1";
mm10-chrY	HAVANA	transcript	56166732	56169096	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000191573.6"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124714.1";
mm10-chrY	HAVANA	exon	56166732	56166917	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000191573.6"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-203"; exon_number 1; exon_id "ENSMUSE00001323169.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124714.1";
mm10-chrY	HAVANA	exon	56167407	56167588	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000191573.6"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-203"; exon_number 2; exon_id "ENSMUSE00001321218.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124714.1";
mm10-chrY	HAVANA	exon	56169028	56169096	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000191573.6"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-203"; exon_number 3; exon_id "ENSMUSE00001335516.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124714.1";
mm10-chrY	HAVANA	transcript	56166732	56169096	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000190539.1"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124715.1";
mm10-chrY	HAVANA	exon	56166732	56166917	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000190539.1"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-202"; exon_number 1; exon_id "ENSMUSE00001323169.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124715.1";
mm10-chrY	HAVANA	exon	56167407	56167588	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000190539.1"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-202"; exon_number 2; exon_id "ENSMUSE00001321218.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124715.1";
mm10-chrY	HAVANA	exon	56168318	56168501	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000190539.1"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-202"; exon_number 3; exon_id "ENSMUSE00001320561.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124715.1";
mm10-chrY	HAVANA	exon	56169028	56169096	.	+	.	gene_id "ENSMUSG00000100144.6"; transcript_id "ENSMUST00000190539.1"; gene_type "lincRNA"; gene_name "Gm28208"; transcript_type "lincRNA"; transcript_name "Gm28208-202"; exon_number 4; exon_id "ENSMUSE00001335516.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000048709.1"; havana_transcript "OTTMUST00000124715.1";
mm10-chrY	HAVANA	gene	56249458	56250153	.	-	.	gene_id "ENSMUSG00000102103.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21851"; level 2; havana_gene "OTTMUSG00000048710.1";
mm10-chrY	HAVANA	transcript	56249458	56250153	.	-	.	gene_id "ENSMUSG00000102103.1"; transcript_id "ENSMUST00000190752.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21851"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21851-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048710.1"; havana_transcript "OTTMUST00000124716.1";
mm10-chrY	HAVANA	exon	56249458	56250153	.	-	.	gene_id "ENSMUSG00000102103.1"; transcript_id "ENSMUST00000190752.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21851"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21851-201"; exon_number 1; exon_id "ENSMUSE00001324346.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048710.1"; havana_transcript "OTTMUST00000124716.1";
mm10-chrY	HAVANA	gene	56323625	56324320	.	-	.	gene_id "ENSMUSG00000099527.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21819"; level 2; havana_gene "OTTMUSG00000048711.1";
mm10-chrY	HAVANA	transcript	56323625	56324320	.	-	.	gene_id "ENSMUSG00000099527.1"; transcript_id "ENSMUST00000187438.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21819-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048711.1"; havana_transcript "OTTMUST00000124717.1";
mm10-chrY	HAVANA	exon	56323625	56324320	.	-	.	gene_id "ENSMUSG00000099527.1"; transcript_id "ENSMUST00000187438.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21819-201"; exon_number 1; exon_id "ENSMUSE00001331294.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048711.1"; havana_transcript "OTTMUST00000124717.1";
mm10-chrY	HAVANA	gene	56353334	56353948	.	-	.	gene_id "ENSMUSG00000101045.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29224"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048712.1";
mm10-chrY	HAVANA	transcript	56353334	56353948	.	-	.	gene_id "ENSMUSG00000101045.1"; transcript_id "ENSMUST00000187965.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29224"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29224-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048712.1"; havana_transcript "OTTMUST00000124718.1";
mm10-chrY	HAVANA	exon	56353334	56353948	.	-	.	gene_id "ENSMUSG00000101045.1"; transcript_id "ENSMUST00000187965.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29224"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29224-201"; exon_number 1; exon_id "ENSMUSE00001328042.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048712.1"; havana_transcript "OTTMUST00000124718.1";
mm10-chrY	HAVANA	gene	56390152	56390846	.	-	.	gene_id "ENSMUSG00000099920.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29223"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048713.1";
mm10-chrY	HAVANA	transcript	56390152	56390846	.	-	.	gene_id "ENSMUSG00000099920.1"; transcript_id "ENSMUST00000188867.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29223"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29223-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048713.1"; havana_transcript "OTTMUST00000124719.1";
mm10-chrY	HAVANA	exon	56390152	56390846	.	-	.	gene_id "ENSMUSG00000099920.1"; transcript_id "ENSMUST00000188867.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29223"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29223-201"; exon_number 1; exon_id "ENSMUSE00001319399.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048713.1"; havana_transcript "OTTMUST00000124719.1";
mm10-chrY	HAVANA	gene	56396951	56400297	.	-	.	gene_id "ENSMUSG00000101021.1"; gene_type "lincRNA"; gene_name "Gm29222"; level 2; havana_gene "OTTMUSG00000048714.1";
mm10-chrY	HAVANA	transcript	56396951	56400297	.	-	.	gene_id "ENSMUSG00000101021.1"; transcript_id "ENSMUST00000185442.1"; gene_type "lincRNA"; gene_name "Gm29222"; transcript_type "lincRNA"; transcript_name "Gm29222-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048714.1"; havana_transcript "OTTMUST00000124720.1";
mm10-chrY	HAVANA	exon	56400076	56400297	.	-	.	gene_id "ENSMUSG00000101021.1"; transcript_id "ENSMUST00000185442.1"; gene_type "lincRNA"; gene_name "Gm29222"; transcript_type "lincRNA"; transcript_name "Gm29222-201"; exon_number 1; exon_id "ENSMUSE00001333266.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048714.1"; havana_transcript "OTTMUST00000124720.1";
mm10-chrY	HAVANA	exon	56396951	56398895	.	-	.	gene_id "ENSMUSG00000101021.1"; transcript_id "ENSMUST00000185442.1"; gene_type "lincRNA"; gene_name "Gm29222"; transcript_type "lincRNA"; transcript_name "Gm29222-201"; exon_number 2; exon_id "ENSMUSE00001326525.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048714.1"; havana_transcript "OTTMUST00000124720.1";
mm10-chrY	HAVANA	gene	56420276	56429767	.	+	.	gene_id "ENSMUSG00000099485.1"; gene_type "lincRNA"; gene_name "Gm29221"; level 2; havana_gene "OTTMUSG00000048715.1";
mm10-chrY	HAVANA	transcript	56420276	56429767	.	+	.	gene_id "ENSMUSG00000099485.1"; transcript_id "ENSMUST00000186092.1"; gene_type "lincRNA"; gene_name "Gm29221"; transcript_type "lincRNA"; transcript_name "Gm29221-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048715.1"; havana_transcript "OTTMUST00000124721.1";
mm10-chrY	HAVANA	exon	56420276	56422846	.	+	.	gene_id "ENSMUSG00000099485.1"; transcript_id "ENSMUST00000186092.1"; gene_type "lincRNA"; gene_name "Gm29221"; transcript_type "lincRNA"; transcript_name "Gm29221-201"; exon_number 1; exon_id "ENSMUSE00001321521.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048715.1"; havana_transcript "OTTMUST00000124721.1";
mm10-chrY	HAVANA	exon	56429445	56429767	.	+	.	gene_id "ENSMUSG00000099485.1"; transcript_id "ENSMUST00000186092.1"; gene_type "lincRNA"; gene_name "Gm29221"; transcript_type "lincRNA"; transcript_name "Gm29221-201"; exon_number 2; exon_id "ENSMUSE00001319246.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048715.1"; havana_transcript "OTTMUST00000124721.1";
mm10-chrY	HAVANA	gene	56438870	56442111	.	+	.	gene_id "ENSMUSG00000099548.1"; gene_type "lincRNA"; gene_name "Gm29220"; level 2; havana_gene "OTTMUSG00000048716.1";
mm10-chrY	HAVANA	transcript	56438870	56442111	.	+	.	gene_id "ENSMUSG00000099548.1"; transcript_id "ENSMUST00000185862.1"; gene_type "lincRNA"; gene_name "Gm29220"; transcript_type "lincRNA"; transcript_name "Gm29220-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048716.1"; havana_transcript "OTTMUST00000124722.1";
mm10-chrY	HAVANA	exon	56438870	56439511	.	+	.	gene_id "ENSMUSG00000099548.1"; transcript_id "ENSMUST00000185862.1"; gene_type "lincRNA"; gene_name "Gm29220"; transcript_type "lincRNA"; transcript_name "Gm29220-201"; exon_number 1; exon_id "ENSMUSE00001318688.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048716.1"; havana_transcript "OTTMUST00000124722.1";
mm10-chrY	HAVANA	exon	56439997	56440182	.	+	.	gene_id "ENSMUSG00000099548.1"; transcript_id "ENSMUST00000185862.1"; gene_type "lincRNA"; gene_name "Gm29220"; transcript_type "lincRNA"; transcript_name "Gm29220-201"; exon_number 2; exon_id "ENSMUSE00001327456.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048716.1"; havana_transcript "OTTMUST00000124722.1";
mm10-chrY	HAVANA	exon	56440912	56441095	.	+	.	gene_id "ENSMUSG00000099548.1"; transcript_id "ENSMUST00000185862.1"; gene_type "lincRNA"; gene_name "Gm29220"; transcript_type "lincRNA"; transcript_name "Gm29220-201"; exon_number 3; exon_id "ENSMUSE00001323664.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048716.1"; havana_transcript "OTTMUST00000124722.1";
mm10-chrY	HAVANA	exon	56441623	56442111	.	+	.	gene_id "ENSMUSG00000099548.1"; transcript_id "ENSMUST00000185862.1"; gene_type "lincRNA"; gene_name "Gm29220"; transcript_type "lincRNA"; transcript_name "Gm29220-201"; exon_number 4; exon_id "ENSMUSE00001319937.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048716.1"; havana_transcript "OTTMUST00000124722.1";
mm10-chrY	HAVANA	gene	56502245	56526833	.	+	.	gene_id "ENSMUSG00000096875.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21815"; level 2; havana_gene "OTTMUSG00000048717.1";
mm10-chrY	HAVANA	transcript	56502245	56526833	.	+	.	gene_id "ENSMUSG00000096875.2"; transcript_id "ENSMUST00000178213.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21815-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048717.1"; havana_transcript "OTTMUST00000124723.1";
mm10-chrY	HAVANA	exon	56502245	56502362	.	+	.	gene_id "ENSMUSG00000096875.2"; transcript_id "ENSMUST00000178213.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21815-201"; exon_number 1; exon_id "ENSMUSE00001081905.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048717.1"; havana_transcript "OTTMUST00000124723.1";
mm10-chrY	HAVANA	exon	56507699	56507765	.	+	.	gene_id "ENSMUSG00000096875.2"; transcript_id "ENSMUST00000178213.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21815-201"; exon_number 2; exon_id "ENSMUSE00001018241.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048717.1"; havana_transcript "OTTMUST00000124723.1";
mm10-chrY	HAVANA	exon	56508425	56508459	.	+	.	gene_id "ENSMUSG00000096875.2"; transcript_id "ENSMUST00000178213.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21815-201"; exon_number 3; exon_id "ENSMUSE00001048893.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048717.1"; havana_transcript "OTTMUST00000124723.1";
mm10-chrY	HAVANA	exon	56515476	56515542	.	+	.	gene_id "ENSMUSG00000096875.2"; transcript_id "ENSMUST00000178213.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21815-201"; exon_number 4; exon_id "ENSMUSE00001080856.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048717.1"; havana_transcript "OTTMUST00000124723.1";
mm10-chrY	HAVANA	exon	56516122	56516156	.	+	.	gene_id "ENSMUSG00000096875.2"; transcript_id "ENSMUST00000178213.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21815-201"; exon_number 5; exon_id "ENSMUSE00001070896.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048717.1"; havana_transcript "OTTMUST00000124723.1";
mm10-chrY	HAVANA	exon	56523326	56523443	.	+	.	gene_id "ENSMUSG00000096875.2"; transcript_id "ENSMUST00000178213.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21815-201"; exon_number 6; exon_id "ENSMUSE00001063604.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048717.1"; havana_transcript "OTTMUST00000124723.1";
mm10-chrY	HAVANA	exon	56524215	56524315	.	+	.	gene_id "ENSMUSG00000096875.2"; transcript_id "ENSMUST00000178213.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21815-201"; exon_number 7; exon_id "ENSMUSE00001084523.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048717.1"; havana_transcript "OTTMUST00000124723.1";
mm10-chrY	HAVANA	exon	56526352	56526450	.	+	.	gene_id "ENSMUSG00000096875.2"; transcript_id "ENSMUST00000178213.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21815-201"; exon_number 8; exon_id "ENSMUSE00001326863.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048717.1"; havana_transcript "OTTMUST00000124723.1";
mm10-chrY	HAVANA	exon	56526810	56526833	.	+	.	gene_id "ENSMUSG00000096875.2"; transcript_id "ENSMUST00000178213.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21815-201"; exon_number 9; exon_id "ENSMUSE00001326582.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048717.1"; havana_transcript "OTTMUST00000124723.1";
mm10-chrY	HAVANA	gene	56725602	56726297	.	-	.	gene_id "ENSMUSG00000099978.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29407"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048723.1";
mm10-chrY	HAVANA	transcript	56725602	56726297	.	-	.	gene_id "ENSMUSG00000099978.1"; transcript_id "ENSMUST00000191468.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29407"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29407-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048723.1"; havana_transcript "OTTMUST00000124728.1";
mm10-chrY	HAVANA	exon	56725602	56726297	.	-	.	gene_id "ENSMUSG00000099978.1"; transcript_id "ENSMUST00000191468.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29407"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29407-201"; exon_number 1; exon_id "ENSMUSE00001334335.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048723.1"; havana_transcript "OTTMUST00000124728.1";
mm10-chrY	HAVANA	gene	56803398	56804256	.	+	.	gene_id "ENSMUSG00000101150.1"; gene_type "lincRNA"; gene_name "Gm29405"; level 2; havana_gene "OTTMUSG00000048724.1";
mm10-chrY	HAVANA	transcript	56803398	56804256	.	+	.	gene_id "ENSMUSG00000101150.1"; transcript_id "ENSMUST00000187204.1"; gene_type "lincRNA"; gene_name "Gm29405"; transcript_type "lincRNA"; transcript_name "Gm29405-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048724.1"; havana_transcript "OTTMUST00000124729.1";
mm10-chrY	HAVANA	exon	56803398	56803583	.	+	.	gene_id "ENSMUSG00000101150.1"; transcript_id "ENSMUST00000187204.1"; gene_type "lincRNA"; gene_name "Gm29405"; transcript_type "lincRNA"; transcript_name "Gm29405-201"; exon_number 1; exon_id "ENSMUSE00001327830.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048724.1"; havana_transcript "OTTMUST00000124729.1";
mm10-chrY	HAVANA	exon	56804073	56804256	.	+	.	gene_id "ENSMUSG00000101150.1"; transcript_id "ENSMUST00000187204.1"; gene_type "lincRNA"; gene_name "Gm29405"; transcript_type "lincRNA"; transcript_name "Gm29405-201"; exon_number 2; exon_id "ENSMUSE00001322533.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048724.1"; havana_transcript "OTTMUST00000124729.1";
mm10-chrY	HAVANA	gene	56941294	56942627	.	-	.	gene_id "ENSMUSG00000099595.1"; gene_type "lincRNA"; gene_name "Gm29406"; level 2; havana_gene "OTTMUSG00000048725.1";
mm10-chrY	HAVANA	transcript	56941294	56942627	.	-	.	gene_id "ENSMUSG00000099595.1"; transcript_id "ENSMUST00000186400.1"; gene_type "lincRNA"; gene_name "Gm29406"; transcript_type "lincRNA"; transcript_name "Gm29406-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048725.1"; havana_transcript "OTTMUST00000124730.1";
mm10-chrY	HAVANA	exon	56942504	56942627	.	-	.	gene_id "ENSMUSG00000099595.1"; transcript_id "ENSMUST00000186400.1"; gene_type "lincRNA"; gene_name "Gm29406"; transcript_type "lincRNA"; transcript_name "Gm29406-201"; exon_number 1; exon_id "ENSMUSE00001331512.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048725.1"; havana_transcript "OTTMUST00000124730.1";
mm10-chrY	HAVANA	exon	56941294	56941404	.	-	.	gene_id "ENSMUSG00000099595.1"; transcript_id "ENSMUST00000186400.1"; gene_type "lincRNA"; gene_name "Gm29406"; transcript_type "lincRNA"; transcript_name "Gm29406-201"; exon_number 2; exon_id "ENSMUSE00001324651.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000048725.1"; havana_transcript "OTTMUST00000124730.1";
mm10-chrY	HAVANA	gene	57016825	57017520	.	-	.	gene_id "ENSMUSG00000100539.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20913"; level 2; havana_gene "OTTMUSG00000048726.1";
mm10-chrY	HAVANA	transcript	57016825	57017520	.	-	.	gene_id "ENSMUSG00000100539.1"; transcript_id "ENSMUST00000189188.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20913"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20913-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048726.1"; havana_transcript "OTTMUST00000124731.1";
mm10-chrY	HAVANA	exon	57016825	57017520	.	-	.	gene_id "ENSMUSG00000100539.1"; transcript_id "ENSMUST00000189188.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20913"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20913-201"; exon_number 1; exon_id "ENSMUSE00001331775.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000048726.1"; havana_transcript "OTTMUST00000124731.1";
mm10-chrY	HAVANA	gene	57033825	57035409	.	+	.	gene_id "ENSMUSG00000100073.1"; gene_type "lincRNA"; gene_name "Gm29404"; level 2; havana_gene "OTTMUSG00000048727.1";
mm10-chrY	HAVANA	transcript	57033825	57035409	.	+	.	gene_id "ENSMUSG00000100073.1"; transcript_id "ENSMUST00000187914.1"; gene_type "lincRNA"; gene_name "Gm29404"; transcript_type "lincRNA"; transcript_name "Gm29404-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048727.1"; havana_transcript "OTTMUST00000124732.1";
mm10-chrY	HAVANA	exon	57033825	57034060	.	+	.	gene_id "ENSMUSG00000100073.1"; transcript_id "ENSMUST00000187914.1"; gene_type "lincRNA"; gene_name "Gm29404"; transcript_type "lincRNA"; transcript_name "Gm29404-201"; exon_number 1; exon_id "ENSMUSE00001323863.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048727.1"; havana_transcript "OTTMUST00000124732.1";
mm10-chrY	HAVANA	exon	57035249	57035409	.	+	.	gene_id "ENSMUSG00000100073.1"; transcript_id "ENSMUST00000187914.1"; gene_type "lincRNA"; gene_name "Gm29404"; transcript_type "lincRNA"; transcript_name "Gm29404-201"; exon_number 2; exon_id "ENSMUSE00001329885.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000048727.1"; havana_transcript "OTTMUST00000124732.1";
mm10-chrY	HAVANA	gene	57046538	57047152	.	-	.	gene_id "ENSMUSG00000100223.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29403"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000048728.1";
mm10-chrY	HAVANA	transcript	57046538	57047152	.	-	.	gene_id "ENSMUSG00000100223.1"; transcript_id "ENSMUST00000185491.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29403"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29403-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048728.1"; havana_transcript "OTTMUST00000124733.1";
mm10-chrY	HAVANA	exon	57046538	57047152	.	-	.	gene_id "ENSMUSG00000100223.1"; transcript_id "ENSMUST00000185491.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29403"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29403-201"; exon_number 1; exon_id "ENSMUSE00001324124.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000048728.1"; havana_transcript "OTTMUST00000124733.1";
mm10-chrY	HAVANA	gene	57083340	57084035	.	-	.	gene_id "ENSMUSG00000100772.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28350"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045355.2";
mm10-chrY	HAVANA	transcript	57083340	57084035	.	-	.	gene_id "ENSMUSG00000100772.1"; transcript_id "ENSMUST00000189453.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28350"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28350-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045355.2"; havana_transcript "OTTMUST00000119079.1";
mm10-chrY	HAVANA	exon	57083340	57084035	.	-	.	gene_id "ENSMUSG00000100772.1"; transcript_id "ENSMUST00000189453.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28350"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28350-201"; exon_number 1; exon_id "ENSMUSE00001319104.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045355.2"; havana_transcript "OTTMUST00000119079.1";
mm10-chrY	HAVANA	gene	57125046	57128288	.	+	.	gene_id "ENSMUSG00000101782.1"; gene_type "lincRNA"; gene_name "Gm28964"; level 2; havana_gene "OTTMUSG00000045404.2";
mm10-chrY	HAVANA	transcript	57125046	57128288	.	+	.	gene_id "ENSMUSG00000101782.1"; transcript_id "ENSMUST00000186771.1"; gene_type "lincRNA"; gene_name "Gm28964"; transcript_type "lincRNA"; transcript_name "Gm28964-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045404.2"; havana_transcript "OTTMUST00000119143.1";
mm10-chrY	HAVANA	exon	57125046	57125685	.	+	.	gene_id "ENSMUSG00000101782.1"; transcript_id "ENSMUST00000186771.1"; gene_type "lincRNA"; gene_name "Gm28964"; transcript_type "lincRNA"; transcript_name "Gm28964-202"; exon_number 1; exon_id "ENSMUSE00001322739.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045404.2"; havana_transcript "OTTMUST00000119143.1";
mm10-chrY	HAVANA	exon	57126171	57126356	.	+	.	gene_id "ENSMUSG00000101782.1"; transcript_id "ENSMUST00000186771.1"; gene_type "lincRNA"; gene_name "Gm28964"; transcript_type "lincRNA"; transcript_name "Gm28964-202"; exon_number 2; exon_id "ENSMUSE00001319718.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045404.2"; havana_transcript "OTTMUST00000119143.1";
mm10-chrY	HAVANA	exon	57127086	57127269	.	+	.	gene_id "ENSMUSG00000101782.1"; transcript_id "ENSMUST00000186771.1"; gene_type "lincRNA"; gene_name "Gm28964"; transcript_type "lincRNA"; transcript_name "Gm28964-202"; exon_number 3; exon_id "ENSMUSE00001318883.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045404.2"; havana_transcript "OTTMUST00000119143.1";
mm10-chrY	HAVANA	exon	57127797	57128288	.	+	.	gene_id "ENSMUSG00000101782.1"; transcript_id "ENSMUST00000186771.1"; gene_type "lincRNA"; gene_name "Gm28964"; transcript_type "lincRNA"; transcript_name "Gm28964-202"; exon_number 4; exon_id "ENSMUSE00001318434.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045404.2"; havana_transcript "OTTMUST00000119143.1";
mm10-chrY	HAVANA	transcript	57125499	57127865	.	+	.	gene_id "ENSMUSG00000101782.1"; transcript_id "ENSMUST00000185396.1"; gene_type "lincRNA"; gene_name "Gm28964"; transcript_type "lincRNA"; transcript_name "Gm28964-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045404.2"; havana_transcript "OTTMUST00000119154.1";
mm10-chrY	HAVANA	exon	57125499	57125685	.	+	.	gene_id "ENSMUSG00000101782.1"; transcript_id "ENSMUST00000185396.1"; gene_type "lincRNA"; gene_name "Gm28964"; transcript_type "lincRNA"; transcript_name "Gm28964-201"; exon_number 1; exon_id "ENSMUSE00001329752.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045404.2"; havana_transcript "OTTMUST00000119154.1";
mm10-chrY	HAVANA	exon	57126175	57126356	.	+	.	gene_id "ENSMUSG00000101782.1"; transcript_id "ENSMUST00000185396.1"; gene_type "lincRNA"; gene_name "Gm28964"; transcript_type "lincRNA"; transcript_name "Gm28964-201"; exon_number 2; exon_id "ENSMUSE00001320501.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045404.2"; havana_transcript "OTTMUST00000119154.1";
mm10-chrY	HAVANA	exon	57127797	57127865	.	+	.	gene_id "ENSMUSG00000101782.1"; transcript_id "ENSMUST00000185396.1"; gene_type "lincRNA"; gene_name "Gm28964"; transcript_type "lincRNA"; transcript_name "Gm28964-201"; exon_number 3; exon_id "ENSMUSE00001319853.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045404.2"; havana_transcript "OTTMUST00000119154.1";
mm10-chrY	HAVANA	gene	57187188	57213362	.	+	.	gene_id "ENSMUSG00000101155.6"; gene_type "protein_coding"; gene_name "Sly"; level 2; havana_gene "OTTMUSG00000045354.3";
mm10-chrY	HAVANA	transcript	57187188	57213321	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	exon	57187188	57187249	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 1; exon_id "ENSMUSE00001334530.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	exon	57188617	57188748	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 2; exon_id "ENSMUSE00001319592.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	CDS	57188631	57188748	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 2; exon_id "ENSMUSE00001319592.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	start_codon	57188631	57188633	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 2; exon_id "ENSMUSE00001319592.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	exon	57194077	57194143	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 3; exon_id "ENSMUSE00001326150.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	CDS	57194077	57194143	.	+	2	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 3; exon_id "ENSMUSE00001326150.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	exon	57194791	57194825	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 4; exon_id "ENSMUSE00001335440.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	CDS	57194791	57194825	.	+	1	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 4; exon_id "ENSMUSE00001335440.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	exon	57209672	57209789	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 5; exon_id "ENSMUSE00001330710.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	CDS	57209672	57209789	.	+	2	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 5; exon_id "ENSMUSE00001330710.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	exon	57210551	57210650	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 6; exon_id "ENSMUSE00001318685.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	CDS	57210551	57210650	.	+	1	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 6; exon_id "ENSMUSE00001318685.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	exon	57212680	57212778	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 7; exon_id "ENSMUSE00001328724.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	CDS	57212680	57212778	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 7; exon_id "ENSMUSE00001328724.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	exon	57213138	57213321	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 8; exon_id "ENSMUSE00001069980.2"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	CDS	57213138	57213164	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 8; exon_id "ENSMUSE00001069980.2"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	stop_codon	57213165	57213167	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 8; exon_id "ENSMUSE00001069980.2"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	UTR	57187188	57187249	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 1; exon_id "ENSMUSE00001334530.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	UTR	57188617	57188630	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 2; exon_id "ENSMUSE00001319592.1"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	UTR	57213165	57213321	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000189109.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-201"; exon_number 8; exon_id "ENSMUSE00001069980.2"; level 2; protein_id "ENSMUSP00000141149.1"; transcript_support_level "1"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119076.1";
mm10-chrY	HAVANA	transcript	57187191	57212749	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	exon	57187191	57187249	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 1; exon_id "ENSMUSE00001335454.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	exon	57194791	57194825	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 2; exon_id "ENSMUSE00001327284.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	exon	57202465	57202499	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 3; exon_id "ENSMUSE00001332528.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	exon	57204478	57204608	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 4; exon_id "ENSMUSE00001325508.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	CDS	57204566	57204608	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 4; exon_id "ENSMUSE00001325508.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	start_codon	57204566	57204568	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 4; exon_id "ENSMUSE00001325508.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	exon	57209672	57209789	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 5; exon_id "ENSMUSE00001330710.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	CDS	57209672	57209789	.	+	2	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 5; exon_id "ENSMUSE00001330710.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	exon	57210551	57210650	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 6; exon_id "ENSMUSE00001318685.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	CDS	57210551	57210650	.	+	1	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 6; exon_id "ENSMUSE00001318685.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	exon	57212680	57212749	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 7; exon_id "ENSMUSE00001329555.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	CDS	57212680	57212749	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 7; exon_id "ENSMUSE00001329555.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	UTR	57187191	57187249	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 1; exon_id "ENSMUSE00001335454.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	UTR	57194791	57194825	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 2; exon_id "ENSMUSE00001327284.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	UTR	57202465	57202499	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 3; exon_id "ENSMUSE00001332528.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	UTR	57204478	57204565	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000191355.6"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-204"; exon_number 4; exon_id "ENSMUSE00001325508.1"; level 2; protein_id "ENSMUSP00000139451.1"; transcript_support_level "5"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000122423.2";
mm10-chrY	HAVANA	transcript	57187194	57204706	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190676.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "processed_transcript"; transcript_name "Sly-203"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119077.1";
mm10-chrY	HAVANA	exon	57187194	57187249	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190676.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "processed_transcript"; transcript_name "Sly-203"; exon_number 1; exon_id "ENSMUSE00001325426.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119077.1";
mm10-chrY	HAVANA	exon	57194077	57194143	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190676.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "processed_transcript"; transcript_name "Sly-203"; exon_number 2; exon_id "ENSMUSE00001328426.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119077.1";
mm10-chrY	HAVANA	exon	57194791	57194825	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190676.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "processed_transcript"; transcript_name "Sly-203"; exon_number 3; exon_id "ENSMUSE00001327284.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119077.1";
mm10-chrY	HAVANA	exon	57202465	57202499	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190676.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "processed_transcript"; transcript_name "Sly-203"; exon_number 4; exon_id "ENSMUSE00001332528.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119077.1";
mm10-chrY	HAVANA	exon	57204478	57204706	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190676.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "processed_transcript"; transcript_name "Sly-203"; exon_number 5; exon_id "ENSMUSE00001318520.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119077.1";
mm10-chrY	HAVANA	transcript	57187206	57213362	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	exon	57187206	57187249	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 1; exon_id "ENSMUSE00001331592.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	exon	57188617	57188748	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 2; exon_id "ENSMUSE00001319592.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	CDS	57188631	57188748	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 2; exon_id "ENSMUSE00001319592.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	start_codon	57188631	57188633	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 2; exon_id "ENSMUSE00001319592.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	exon	57194077	57194143	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 3; exon_id "ENSMUSE00001326150.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	CDS	57194077	57194143	.	+	2	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 3; exon_id "ENSMUSE00001326150.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	exon	57194791	57194825	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 4; exon_id "ENSMUSE00001335440.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	CDS	57194791	57194825	.	+	1	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 4; exon_id "ENSMUSE00001335440.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	exon	57201822	57201888	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 5; exon_id "ENSMUSE00001327942.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	CDS	57201822	57201888	.	+	2	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 5; exon_id "ENSMUSE00001327942.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	exon	57202465	57202499	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 6; exon_id "ENSMUSE00001318736.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	CDS	57202465	57202499	.	+	1	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 6; exon_id "ENSMUSE00001318736.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	exon	57209672	57209789	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 7; exon_id "ENSMUSE00001330710.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	CDS	57209672	57209789	.	+	2	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 7; exon_id "ENSMUSE00001330710.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	exon	57210551	57210650	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 8; exon_id "ENSMUSE00001318685.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	CDS	57210551	57210650	.	+	1	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 8; exon_id "ENSMUSE00001318685.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	exon	57212680	57212778	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 9; exon_id "ENSMUSE00001328724.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	CDS	57212680	57212778	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 9; exon_id "ENSMUSE00001328724.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	exon	57213138	57213362	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 10; exon_id "ENSMUSE00001336100.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	CDS	57213138	57213164	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 10; exon_id "ENSMUSE00001336100.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	stop_codon	57213165	57213167	.	+	0	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 10; exon_id "ENSMUSE00001336100.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	UTR	57187206	57187249	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 1; exon_id "ENSMUSE00001331592.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	UTR	57188617	57188630	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 2; exon_id "ENSMUSE00001319592.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	UTR	57213165	57213362	.	+	.	gene_id "ENSMUSG00000101155.6"; transcript_id "ENSMUST00000190292.1"; gene_type "protein_coding"; gene_name "Sly"; transcript_type "protein_coding"; transcript_name "Sly-202"; exon_number 10; exon_id "ENSMUSE00001336100.1"; level 2; protein_id "ENSMUSP00000140340.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_2"; tag "CCDS"; ccdsid "CCDS81234.1"; havana_gene "OTTMUSG00000045354.3"; havana_transcript "OTTMUST00000119078.1";
mm10-chrY	HAVANA	gene	57273550	57274243	.	-	.	gene_id "ENSMUSG00000100295.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28165"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045356.2";
mm10-chrY	HAVANA	transcript	57273550	57274243	.	-	.	gene_id "ENSMUSG00000100295.1"; transcript_id "ENSMUST00000190669.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28165-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045356.2"; havana_transcript "OTTMUST00000119080.2";
mm10-chrY	HAVANA	exon	57273550	57274243	.	-	.	gene_id "ENSMUSG00000100295.1"; transcript_id "ENSMUST00000190669.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28165"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28165-201"; exon_number 1; exon_id "ENSMUSE00001330007.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045356.2"; havana_transcript "OTTMUST00000119080.2";
mm10-chrY	HAVANA	gene	57343729	57354175	.	-	.	gene_id "ENSMUSG00000100578.1"; gene_type "lincRNA"; gene_name "Gm28709"; level 2; havana_gene "OTTMUSG00000047393.1";
mm10-chrY	HAVANA	transcript	57343729	57354175	.	-	.	gene_id "ENSMUSG00000100578.1"; transcript_id "ENSMUST00000186967.1"; gene_type "lincRNA"; gene_name "Gm28709"; transcript_type "lincRNA"; transcript_name "Gm28709-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047393.1"; havana_transcript "OTTMUST00000122424.1";
mm10-chrY	HAVANA	exon	57354117	57354175	.	-	.	gene_id "ENSMUSG00000100578.1"; transcript_id "ENSMUST00000186967.1"; gene_type "lincRNA"; gene_name "Gm28709"; transcript_type "lincRNA"; transcript_name "Gm28709-201"; exon_number 1; exon_id "ENSMUSE00001329459.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047393.1"; havana_transcript "OTTMUST00000122424.1";
mm10-chrY	HAVANA	exon	57350355	57350496	.	-	.	gene_id "ENSMUSG00000100578.1"; transcript_id "ENSMUST00000186967.1"; gene_type "lincRNA"; gene_name "Gm28709"; transcript_type "lincRNA"; transcript_name "Gm28709-201"; exon_number 2; exon_id "ENSMUSE00001320992.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047393.1"; havana_transcript "OTTMUST00000122424.1";
mm10-chrY	HAVANA	exon	57345280	57345371	.	-	.	gene_id "ENSMUSG00000100578.1"; transcript_id "ENSMUST00000186967.1"; gene_type "lincRNA"; gene_name "Gm28709"; transcript_type "lincRNA"; transcript_name "Gm28709-201"; exon_number 3; exon_id "ENSMUSE00001329337.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047393.1"; havana_transcript "OTTMUST00000122424.1";
mm10-chrY	HAVANA	exon	57343729	57343891	.	-	.	gene_id "ENSMUSG00000100578.1"; transcript_id "ENSMUST00000186967.1"; gene_type "lincRNA"; gene_name "Gm28709"; transcript_type "lincRNA"; transcript_name "Gm28709-201"; exon_number 4; exon_id "ENSMUSE00001335258.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047393.1"; havana_transcript "OTTMUST00000122424.1";
mm10-chrY	HAVANA	gene	57347488	57350727	.	+	.	gene_id "ENSMUSG00000101245.1"; gene_type "lincRNA"; gene_name "Gm28965"; level 2; havana_gene "OTTMUSG00000045406.1";
mm10-chrY	HAVANA	transcript	57347488	57350727	.	+	.	gene_id "ENSMUSG00000101245.1"; transcript_id "ENSMUST00000186015.1"; gene_type "lincRNA"; gene_name "Gm28965"; transcript_type "lincRNA"; transcript_name "Gm28965-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045406.1"; havana_transcript "OTTMUST00000119146.1";
mm10-chrY	HAVANA	exon	57347488	57348125	.	+	.	gene_id "ENSMUSG00000101245.1"; transcript_id "ENSMUST00000186015.1"; gene_type "lincRNA"; gene_name "Gm28965"; transcript_type "lincRNA"; transcript_name "Gm28965-201"; exon_number 1; exon_id "ENSMUSE00001335352.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045406.1"; havana_transcript "OTTMUST00000119146.1";
mm10-chrY	HAVANA	exon	57348611	57348796	.	+	.	gene_id "ENSMUSG00000101245.1"; transcript_id "ENSMUST00000186015.1"; gene_type "lincRNA"; gene_name "Gm28965"; transcript_type "lincRNA"; transcript_name "Gm28965-201"; exon_number 2; exon_id "ENSMUSE00001335615.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045406.1"; havana_transcript "OTTMUST00000119146.1";
mm10-chrY	HAVANA	exon	57349526	57349709	.	+	.	gene_id "ENSMUSG00000101245.1"; transcript_id "ENSMUST00000186015.1"; gene_type "lincRNA"; gene_name "Gm28965"; transcript_type "lincRNA"; transcript_name "Gm28965-201"; exon_number 3; exon_id "ENSMUSE00001330560.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045406.1"; havana_transcript "OTTMUST00000119146.1";
mm10-chrY	HAVANA	exon	57350236	57350727	.	+	.	gene_id "ENSMUSG00000101245.1"; transcript_id "ENSMUST00000186015.1"; gene_type "lincRNA"; gene_name "Gm28965"; transcript_type "lincRNA"; transcript_name "Gm28965-201"; exon_number 4; exon_id "ENSMUSE00001319932.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045406.1"; havana_transcript "OTTMUST00000119146.1";
mm10-chrY	HAVANA	transcript	57347940	57350304	.	+	.	gene_id "ENSMUSG00000101245.1"; transcript_id "ENSMUST00000187947.1"; gene_type "lincRNA"; gene_name "Gm28965"; transcript_type "lincRNA"; transcript_name "Gm28965-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045406.1"; havana_transcript "OTTMUST00000119147.1";
mm10-chrY	HAVANA	exon	57347940	57348125	.	+	.	gene_id "ENSMUSG00000101245.1"; transcript_id "ENSMUST00000187947.1"; gene_type "lincRNA"; gene_name "Gm28965"; transcript_type "lincRNA"; transcript_name "Gm28965-202"; exon_number 1; exon_id "ENSMUSE00001335318.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045406.1"; havana_transcript "OTTMUST00000119147.1";
mm10-chrY	HAVANA	exon	57348615	57348796	.	+	.	gene_id "ENSMUSG00000101245.1"; transcript_id "ENSMUST00000187947.1"; gene_type "lincRNA"; gene_name "Gm28965"; transcript_type "lincRNA"; transcript_name "Gm28965-202"; exon_number 2; exon_id "ENSMUSE00001321386.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045406.1"; havana_transcript "OTTMUST00000119147.1";
mm10-chrY	HAVANA	exon	57350236	57350304	.	+	.	gene_id "ENSMUSG00000101245.1"; transcript_id "ENSMUST00000187947.1"; gene_type "lincRNA"; gene_name "Gm28965"; transcript_type "lincRNA"; transcript_name "Gm28965-202"; exon_number 3; exon_id "ENSMUSE00001318430.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045406.1"; havana_transcript "OTTMUST00000119147.1";
mm10-chrY	HAVANA	gene	57457146	57459489	.	-	.	gene_id "ENSMUSG00000100456.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21868"; level 2; havana_gene "OTTMUSG00000045361.2";
mm10-chrY	HAVANA	transcript	57457146	57459489	.	-	.	gene_id "ENSMUSG00000100456.1"; transcript_id "ENSMUST00000185623.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21868"; transcript_type "processed_transcript"; transcript_name "Gm21868-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045361.2"; havana_transcript "OTTMUST00000119089.1";
mm10-chrY	HAVANA	exon	57459366	57459489	.	-	.	gene_id "ENSMUSG00000100456.1"; transcript_id "ENSMUST00000185623.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21868"; transcript_type "processed_transcript"; transcript_name "Gm21868-201"; exon_number 1; exon_id "ENSMUSE00001324025.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045361.2"; havana_transcript "OTTMUST00000119089.1";
mm10-chrY	HAVANA	exon	57457146	57458251	.	-	.	gene_id "ENSMUSG00000100456.1"; transcript_id "ENSMUST00000185623.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21868"; transcript_type "processed_transcript"; transcript_name "Gm21868-201"; exon_number 2; exon_id "ENSMUSE00001329263.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045361.2"; havana_transcript "OTTMUST00000119089.1";
mm10-chrY	HAVANA	transcript	57457276	57457969	.	-	.	gene_id "ENSMUSG00000100456.1"; transcript_id "ENSMUST00000190370.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21868"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm21868-202"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045361.2"; havana_transcript "OTTMUST00000119148.1";
mm10-chrY	HAVANA	exon	57457276	57457969	.	-	.	gene_id "ENSMUSG00000100456.1"; transcript_id "ENSMUST00000190370.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21868"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm21868-202"; exon_number 1; exon_id "ENSMUSE00001330446.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045361.2"; havana_transcript "OTTMUST00000119148.1";
mm10-chrY	HAVANA	gene	57531412	57533744	.	-	.	gene_id "ENSMUSG00000096122.2"; gene_type "protein_coding"; gene_name "Gm21943"; level 2; havana_gene "OTTMUSG00000045362.3";
mm10-chrY	HAVANA	transcript	57531412	57533744	.	-	.	gene_id "ENSMUSG00000096122.2"; transcript_id "ENSMUST00000178181.2"; gene_type "protein_coding"; gene_name "Gm21943"; transcript_type "protein_coding"; transcript_name "Gm21943-201"; level 2; protein_id "ENSMUSP00000136356.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85887.1"; havana_gene "OTTMUSG00000045362.3"; havana_transcript "OTTMUST00000119090.2";
mm10-chrY	HAVANA	exon	57533625	57533744	.	-	.	gene_id "ENSMUSG00000096122.2"; transcript_id "ENSMUST00000178181.2"; gene_type "protein_coding"; gene_name "Gm21943"; transcript_type "protein_coding"; transcript_name "Gm21943-201"; exon_number 1; exon_id "ENSMUSE00001023059.2"; level 2; protein_id "ENSMUSP00000136356.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85887.1"; havana_gene "OTTMUSG00000045362.3"; havana_transcript "OTTMUST00000119090.2";
mm10-chrY	HAVANA	exon	57531412	57532520	.	-	.	gene_id "ENSMUSG00000096122.2"; transcript_id "ENSMUST00000178181.2"; gene_type "protein_coding"; gene_name "Gm21943"; transcript_type "protein_coding"; transcript_name "Gm21943-201"; exon_number 2; exon_id "ENSMUSE00001046104.2"; level 2; protein_id "ENSMUSP00000136356.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85887.1"; havana_gene "OTTMUSG00000045362.3"; havana_transcript "OTTMUST00000119090.2";
mm10-chrY	HAVANA	CDS	57531559	57532239	.	-	0	gene_id "ENSMUSG00000096122.2"; transcript_id "ENSMUST00000178181.2"; gene_type "protein_coding"; gene_name "Gm21943"; transcript_type "protein_coding"; transcript_name "Gm21943-201"; exon_number 2; exon_id "ENSMUSE00001046104.2"; level 2; protein_id "ENSMUSP00000136356.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85887.1"; havana_gene "OTTMUSG00000045362.3"; havana_transcript "OTTMUST00000119090.2";
mm10-chrY	HAVANA	start_codon	57532237	57532239	.	-	0	gene_id "ENSMUSG00000096122.2"; transcript_id "ENSMUST00000178181.2"; gene_type "protein_coding"; gene_name "Gm21943"; transcript_type "protein_coding"; transcript_name "Gm21943-201"; exon_number 2; exon_id "ENSMUSE00001046104.2"; level 2; protein_id "ENSMUSP00000136356.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85887.1"; havana_gene "OTTMUSG00000045362.3"; havana_transcript "OTTMUST00000119090.2";
mm10-chrY	HAVANA	stop_codon	57531556	57531558	.	-	0	gene_id "ENSMUSG00000096122.2"; transcript_id "ENSMUST00000178181.2"; gene_type "protein_coding"; gene_name "Gm21943"; transcript_type "protein_coding"; transcript_name "Gm21943-201"; exon_number 2; exon_id "ENSMUSE00001046104.2"; level 2; protein_id "ENSMUSP00000136356.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85887.1"; havana_gene "OTTMUSG00000045362.3"; havana_transcript "OTTMUST00000119090.2";
mm10-chrY	HAVANA	UTR	57533625	57533744	.	-	.	gene_id "ENSMUSG00000096122.2"; transcript_id "ENSMUST00000178181.2"; gene_type "protein_coding"; gene_name "Gm21943"; transcript_type "protein_coding"; transcript_name "Gm21943-201"; exon_number 1; exon_id "ENSMUSE00001023059.2"; level 2; protein_id "ENSMUSP00000136356.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85887.1"; havana_gene "OTTMUSG00000045362.3"; havana_transcript "OTTMUST00000119090.2";
mm10-chrY	HAVANA	UTR	57531412	57531558	.	-	.	gene_id "ENSMUSG00000096122.2"; transcript_id "ENSMUST00000178181.2"; gene_type "protein_coding"; gene_name "Gm21943"; transcript_type "protein_coding"; transcript_name "Gm21943-201"; exon_number 2; exon_id "ENSMUSE00001046104.2"; level 2; protein_id "ENSMUSP00000136356.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85887.1"; havana_gene "OTTMUSG00000045362.3"; havana_transcript "OTTMUST00000119090.2";
mm10-chrY	HAVANA	UTR	57532240	57532520	.	-	.	gene_id "ENSMUSG00000096122.2"; transcript_id "ENSMUST00000178181.2"; gene_type "protein_coding"; gene_name "Gm21943"; transcript_type "protein_coding"; transcript_name "Gm21943-201"; exon_number 2; exon_id "ENSMUSE00001046104.2"; level 2; protein_id "ENSMUSP00000136356.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85887.1"; havana_gene "OTTMUSG00000045362.3"; havana_transcript "OTTMUST00000119090.2";
mm10-chrY	HAVANA	gene	57559217	57563464	.	-	.	gene_id "ENSMUSG00000101943.1"; gene_type "lincRNA"; gene_name "Gm28532"; level 2; havana_gene "OTTMUSG00000045363.1";
mm10-chrY	HAVANA	transcript	57559217	57563464	.	-	.	gene_id "ENSMUSG00000101943.1"; transcript_id "ENSMUST00000190408.1"; gene_type "lincRNA"; gene_name "Gm28532"; transcript_type "lincRNA"; transcript_name "Gm28532-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045363.1"; havana_transcript "OTTMUST00000119091.1";
mm10-chrY	HAVANA	exon	57563384	57563464	.	-	.	gene_id "ENSMUSG00000101943.1"; transcript_id "ENSMUST00000190408.1"; gene_type "lincRNA"; gene_name "Gm28532"; transcript_type "lincRNA"; transcript_name "Gm28532-201"; exon_number 1; exon_id "ENSMUSE00001321533.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045363.1"; havana_transcript "OTTMUST00000119091.1";
mm10-chrY	HAVANA	exon	57561824	57562060	.	-	.	gene_id "ENSMUSG00000101943.1"; transcript_id "ENSMUST00000190408.1"; gene_type "lincRNA"; gene_name "Gm28532"; transcript_type "lincRNA"; transcript_name "Gm28532-201"; exon_number 2; exon_id "ENSMUSE00001335240.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045363.1"; havana_transcript "OTTMUST00000119091.1";
mm10-chrY	HAVANA	exon	57559802	57559985	.	-	.	gene_id "ENSMUSG00000101943.1"; transcript_id "ENSMUST00000190408.1"; gene_type "lincRNA"; gene_name "Gm28532"; transcript_type "lincRNA"; transcript_name "Gm28532-201"; exon_number 3; exon_id "ENSMUSE00001333301.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045363.1"; havana_transcript "OTTMUST00000119091.1";
mm10-chrY	HAVANA	exon	57559217	57559286	.	-	.	gene_id "ENSMUSG00000101943.1"; transcript_id "ENSMUST00000190408.1"; gene_type "lincRNA"; gene_name "Gm28532"; transcript_type "lincRNA"; transcript_name "Gm28532-201"; exon_number 4; exon_id "ENSMUSE00001318895.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045363.1"; havana_transcript "OTTMUST00000119091.1";
mm10-chrY	HAVANA	gene	57598047	57600691	.	-	.	gene_id "ENSMUSG00000100724.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28533"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045364.2";
mm10-chrY	HAVANA	transcript	57598047	57600691	.	-	.	gene_id "ENSMUSG00000100724.1"; transcript_id "ENSMUST00000190106.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28533"; transcript_type "processed_transcript"; transcript_name "Gm28533-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045364.2"; havana_transcript "OTTMUST00000119132.1";
mm10-chrY	HAVANA	exon	57600501	57600691	.	-	.	gene_id "ENSMUSG00000100724.1"; transcript_id "ENSMUST00000190106.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28533"; transcript_type "processed_transcript"; transcript_name "Gm28533-202"; exon_number 1; exon_id "ENSMUSE00001322804.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045364.2"; havana_transcript "OTTMUST00000119132.1";
mm10-chrY	HAVANA	exon	57599894	57600079	.	-	.	gene_id "ENSMUSG00000100724.1"; transcript_id "ENSMUST00000190106.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28533"; transcript_type "processed_transcript"; transcript_name "Gm28533-202"; exon_number 2; exon_id "ENSMUSE00001328063.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045364.2"; havana_transcript "OTTMUST00000119132.1";
mm10-chrY	HAVANA	exon	57598047	57599015	.	-	.	gene_id "ENSMUSG00000100724.1"; transcript_id "ENSMUST00000190106.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28533"; transcript_type "processed_transcript"; transcript_name "Gm28533-202"; exon_number 3; exon_id "ENSMUSE00001326132.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045364.2"; havana_transcript "OTTMUST00000119132.1";
mm10-chrY	HAVANA	transcript	57598306	57598875	.	-	.	gene_id "ENSMUSG00000100724.1"; transcript_id "ENSMUST00000186741.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28533"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28533-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045364.2"; havana_transcript "OTTMUST00000119092.2";
mm10-chrY	HAVANA	exon	57598306	57598875	.	-	.	gene_id "ENSMUSG00000100724.1"; transcript_id "ENSMUST00000186741.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28533"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28533-201"; exon_number 1; exon_id "ENSMUSE00001328509.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045364.2"; havana_transcript "OTTMUST00000119092.2";
mm10-chrY	HAVANA	gene	57643572	57646813	.	+	.	gene_id "ENSMUSG00000099388.1"; gene_type "lincRNA"; gene_name "Gm28966"; level 2; havana_gene "OTTMUSG00000045407.1";
mm10-chrY	HAVANA	transcript	57643572	57646813	.	+	.	gene_id "ENSMUSG00000099388.1"; transcript_id "ENSMUST00000188951.1"; gene_type "lincRNA"; gene_name "Gm28966"; transcript_type "lincRNA"; transcript_name "Gm28966-201"; level 2; transcript_support_level "5"; tag "non_canonical_other"; tag "basic"; havana_gene "OTTMUSG00000045407.1"; havana_transcript "OTTMUST00000119150.1";
mm10-chrY	HAVANA	exon	57643572	57644213	.	+	.	gene_id "ENSMUSG00000099388.1"; transcript_id "ENSMUST00000188951.1"; gene_type "lincRNA"; gene_name "Gm28966"; transcript_type "lincRNA"; transcript_name "Gm28966-201"; exon_number 1; exon_id "ENSMUSE00001323642.1"; level 2; transcript_support_level "5"; tag "non_canonical_other"; tag "basic"; havana_gene "OTTMUSG00000045407.1"; havana_transcript "OTTMUST00000119150.1";
mm10-chrY	HAVANA	exon	57644699	57644884	.	+	.	gene_id "ENSMUSG00000099388.1"; transcript_id "ENSMUST00000188951.1"; gene_type "lincRNA"; gene_name "Gm28966"; transcript_type "lincRNA"; transcript_name "Gm28966-201"; exon_number 2; exon_id "ENSMUSE00001331311.1"; level 2; transcript_support_level "5"; tag "non_canonical_other"; tag "basic"; havana_gene "OTTMUSG00000045407.1"; havana_transcript "OTTMUST00000119150.1";
mm10-chrY	HAVANA	exon	57645615	57645798	.	+	.	gene_id "ENSMUSG00000099388.1"; transcript_id "ENSMUST00000188951.1"; gene_type "lincRNA"; gene_name "Gm28966"; transcript_type "lincRNA"; transcript_name "Gm28966-201"; exon_number 3; exon_id "ENSMUSE00001335514.1"; level 2; transcript_support_level "5"; tag "non_canonical_other"; tag "basic"; havana_gene "OTTMUSG00000045407.1"; havana_transcript "OTTMUST00000119150.1";
mm10-chrY	HAVANA	exon	57646325	57646813	.	+	.	gene_id "ENSMUSG00000099388.1"; transcript_id "ENSMUST00000188951.1"; gene_type "lincRNA"; gene_name "Gm28966"; transcript_type "lincRNA"; transcript_name "Gm28966-201"; exon_number 4; exon_id "ENSMUSE00001320262.1"; level 2; transcript_support_level "5"; tag "non_canonical_other"; tag "basic"; havana_gene "OTTMUSG00000045407.1"; havana_transcript "OTTMUST00000119150.1";
mm10-chrY	HAVANA	transcript	57644026	57646393	.	+	.	gene_id "ENSMUSG00000099388.1"; transcript_id "ENSMUST00000189267.1"; gene_type "lincRNA"; gene_name "Gm28966"; transcript_type "lincRNA"; transcript_name "Gm28966-202"; level 2; transcript_support_level "5"; tag "non_canonical_other"; havana_gene "OTTMUSG00000045407.1"; havana_transcript "OTTMUST00000119151.1";
mm10-chrY	HAVANA	exon	57644026	57644213	.	+	.	gene_id "ENSMUSG00000099388.1"; transcript_id "ENSMUST00000189267.1"; gene_type "lincRNA"; gene_name "Gm28966"; transcript_type "lincRNA"; transcript_name "Gm28966-202"; exon_number 1; exon_id "ENSMUSE00001320952.1"; level 2; transcript_support_level "5"; tag "non_canonical_other"; havana_gene "OTTMUSG00000045407.1"; havana_transcript "OTTMUST00000119151.1";
mm10-chrY	HAVANA	exon	57644703	57644884	.	+	.	gene_id "ENSMUSG00000099388.1"; transcript_id "ENSMUST00000189267.1"; gene_type "lincRNA"; gene_name "Gm28966"; transcript_type "lincRNA"; transcript_name "Gm28966-202"; exon_number 2; exon_id "ENSMUSE00001331377.1"; level 2; transcript_support_level "5"; tag "non_canonical_other"; havana_gene "OTTMUSG00000045407.1"; havana_transcript "OTTMUST00000119151.1";
mm10-chrY	HAVANA	exon	57646325	57646393	.	+	.	gene_id "ENSMUSG00000099388.1"; transcript_id "ENSMUST00000189267.1"; gene_type "lincRNA"; gene_name "Gm28966"; transcript_type "lincRNA"; transcript_name "Gm28966-202"; exon_number 3; exon_id "ENSMUSE00001326024.1"; level 2; transcript_support_level "5"; tag "non_canonical_other"; havana_gene "OTTMUSG00000045407.1"; havana_transcript "OTTMUST00000119151.1";
mm10-chrY	HAVANA	gene	57705697	57731932	.	+	.	gene_id "ENSMUSG00000101399.1"; gene_type "protein_coding"; gene_name "Gm28961"; level 2; havana_gene "OTTMUSG00000045400.1";
mm10-chrY	HAVANA	transcript	57705697	57731932	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	exon	57705697	57705740	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 1; exon_id "ENSMUSE00001329576.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	exon	57707106	57707237	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 2; exon_id "ENSMUSE00001322815.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	CDS	57707120	57707237	.	+	0	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 2; exon_id "ENSMUSE00001322815.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	start_codon	57707120	57707122	.	+	0	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 2; exon_id "ENSMUSE00001322815.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	exon	57712569	57712635	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 3; exon_id "ENSMUSE00001321314.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	CDS	57712569	57712635	.	+	2	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 3; exon_id "ENSMUSE00001321314.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	exon	57713266	57713300	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 4; exon_id "ENSMUSE00001321033.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	CDS	57713266	57713300	.	+	1	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 4; exon_id "ENSMUSE00001321033.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	exon	57720338	57720404	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 5; exon_id "ENSMUSE00001326892.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	CDS	57720338	57720404	.	+	2	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 5; exon_id "ENSMUSE00001326892.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	exon	57720984	57721018	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 6; exon_id "ENSMUSE00001326518.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	CDS	57720984	57721018	.	+	1	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 6; exon_id "ENSMUSE00001326518.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	exon	57728219	57728336	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 7; exon_id "ENSMUSE00001332509.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	CDS	57728219	57728336	.	+	2	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 7; exon_id "ENSMUSE00001332509.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	exon	57729110	57729209	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 8; exon_id "ENSMUSE00001318145.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	CDS	57729110	57729209	.	+	1	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 8; exon_id "ENSMUSE00001318145.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	exon	57731249	57731347	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 9; exon_id "ENSMUSE00001330010.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	CDS	57731249	57731347	.	+	0	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 9; exon_id "ENSMUSE00001330010.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	exon	57731707	57731932	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 10; exon_id "ENSMUSE00001326961.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	CDS	57731707	57731733	.	+	0	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 10; exon_id "ENSMUSE00001326961.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	stop_codon	57731734	57731736	.	+	0	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 10; exon_id "ENSMUSE00001326961.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	UTR	57705697	57705740	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 1; exon_id "ENSMUSE00001329576.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	UTR	57707106	57707119	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 2; exon_id "ENSMUSE00001322815.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	UTR	57731734	57731932	.	+	.	gene_id "ENSMUSG00000101399.1"; transcript_id "ENSMUST00000190573.1"; gene_type "protein_coding"; gene_name "Gm28961"; transcript_type "protein_coding"; transcript_name "Gm28961-201"; exon_number 10; exon_id "ENSMUSE00001326961.1"; level 2; protein_id "ENSMUSP00000139697.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045400.1"; havana_transcript "OTTMUST00000119135.1";
mm10-chrY	HAVANA	gene	57821935	57824297	.	-	.	gene_id "ENSMUSG00000101350.6"; gene_type "lincRNA"; gene_name "Gm28962"; level 2; havana_gene "OTTMUSG00000045401.1";
mm10-chrY	HAVANA	transcript	57821935	57824297	.	-	.	gene_id "ENSMUSG00000101350.6"; transcript_id "ENSMUST00000187993.6"; gene_type "lincRNA"; gene_name "Gm28962"; transcript_type "lincRNA"; transcript_name "Gm28962-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045401.1"; havana_transcript "OTTMUST00000119136.1";
mm10-chrY	HAVANA	exon	57824112	57824297	.	-	.	gene_id "ENSMUSG00000101350.6"; transcript_id "ENSMUST00000187993.6"; gene_type "lincRNA"; gene_name "Gm28962"; transcript_type "lincRNA"; transcript_name "Gm28962-201"; exon_number 1; exon_id "ENSMUSE00001326759.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045401.1"; havana_transcript "OTTMUST00000119136.1";
mm10-chrY	HAVANA	exon	57823443	57823624	.	-	.	gene_id "ENSMUSG00000101350.6"; transcript_id "ENSMUST00000187993.6"; gene_type "lincRNA"; gene_name "Gm28962"; transcript_type "lincRNA"; transcript_name "Gm28962-201"; exon_number 2; exon_id "ENSMUSE00001327629.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045401.1"; havana_transcript "OTTMUST00000119136.1";
mm10-chrY	HAVANA	exon	57822532	57822715	.	-	.	gene_id "ENSMUSG00000101350.6"; transcript_id "ENSMUST00000187993.6"; gene_type "lincRNA"; gene_name "Gm28962"; transcript_type "lincRNA"; transcript_name "Gm28962-201"; exon_number 3; exon_id "ENSMUSE00001319907.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045401.1"; havana_transcript "OTTMUST00000119136.1";
mm10-chrY	HAVANA	exon	57821935	57822003	.	-	.	gene_id "ENSMUSG00000101350.6"; transcript_id "ENSMUST00000187993.6"; gene_type "lincRNA"; gene_name "Gm28962"; transcript_type "lincRNA"; transcript_name "Gm28962-201"; exon_number 4; exon_id "ENSMUSE00001334257.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045401.1"; havana_transcript "OTTMUST00000119136.1";
mm10-chrY	HAVANA	transcript	57821935	57824297	.	-	.	gene_id "ENSMUSG00000101350.6"; transcript_id "ENSMUST00000190244.1"; gene_type "lincRNA"; gene_name "Gm28962"; transcript_type "lincRNA"; transcript_name "Gm28962-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045401.1"; havana_transcript "OTTMUST00000119137.1";
mm10-chrY	HAVANA	exon	57824112	57824297	.	-	.	gene_id "ENSMUSG00000101350.6"; transcript_id "ENSMUST00000190244.1"; gene_type "lincRNA"; gene_name "Gm28962"; transcript_type "lincRNA"; transcript_name "Gm28962-202"; exon_number 1; exon_id "ENSMUSE00001326759.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045401.1"; havana_transcript "OTTMUST00000119137.1";
mm10-chrY	HAVANA	exon	57823443	57823624	.	-	.	gene_id "ENSMUSG00000101350.6"; transcript_id "ENSMUST00000190244.1"; gene_type "lincRNA"; gene_name "Gm28962"; transcript_type "lincRNA"; transcript_name "Gm28962-202"; exon_number 2; exon_id "ENSMUSE00001327629.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045401.1"; havana_transcript "OTTMUST00000119137.1";
mm10-chrY	HAVANA	exon	57821935	57822003	.	-	.	gene_id "ENSMUSG00000101350.6"; transcript_id "ENSMUST00000190244.1"; gene_type "lincRNA"; gene_name "Gm28962"; transcript_type "lincRNA"; transcript_name "Gm28962-202"; exon_number 3; exon_id "ENSMUSE00001334257.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045401.1"; havana_transcript "OTTMUST00000119137.1";
mm10-chrY	HAVANA	gene	57850477	57853710	.	-	.	gene_id "ENSMUSG00000100614.1"; gene_type "lincRNA"; gene_name "Gm28963"; level 2; havana_gene "OTTMUSG00000045402.1";
mm10-chrY	HAVANA	transcript	57850477	57853710	.	-	.	gene_id "ENSMUSG00000100614.1"; transcript_id "ENSMUST00000189567.1"; gene_type "lincRNA"; gene_name "Gm28963"; transcript_type "lincRNA"; transcript_name "Gm28963-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045402.1"; havana_transcript "OTTMUST00000119138.1";
mm10-chrY	HAVANA	exon	57853072	57853710	.	-	.	gene_id "ENSMUSG00000100614.1"; transcript_id "ENSMUST00000189567.1"; gene_type "lincRNA"; gene_name "Gm28963"; transcript_type "lincRNA"; transcript_name "Gm28963-202"; exon_number 1; exon_id "ENSMUSE00001330743.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045402.1"; havana_transcript "OTTMUST00000119138.1";
mm10-chrY	HAVANA	exon	57852405	57852587	.	-	.	gene_id "ENSMUSG00000100614.1"; transcript_id "ENSMUST00000189567.1"; gene_type "lincRNA"; gene_name "Gm28963"; transcript_type "lincRNA"; transcript_name "Gm28963-202"; exon_number 2; exon_id "ENSMUSE00001335412.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045402.1"; havana_transcript "OTTMUST00000119138.1";
mm10-chrY	HAVANA	exon	57851494	57851674	.	-	.	gene_id "ENSMUSG00000100614.1"; transcript_id "ENSMUST00000189567.1"; gene_type "lincRNA"; gene_name "Gm28963"; transcript_type "lincRNA"; transcript_name "Gm28963-202"; exon_number 3; exon_id "ENSMUSE00001319162.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045402.1"; havana_transcript "OTTMUST00000119138.1";
mm10-chrY	HAVANA	exon	57850477	57850966	.	-	.	gene_id "ENSMUSG00000100614.1"; transcript_id "ENSMUST00000189567.1"; gene_type "lincRNA"; gene_name "Gm28963"; transcript_type "lincRNA"; transcript_name "Gm28963-202"; exon_number 4; exon_id "ENSMUSE00001329615.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045402.1"; havana_transcript "OTTMUST00000119138.1";
mm10-chrY	HAVANA	transcript	57850901	57853257	.	-	.	gene_id "ENSMUSG00000100614.1"; transcript_id "ENSMUST00000187027.1"; gene_type "lincRNA"; gene_name "Gm28963"; transcript_type "lincRNA"; transcript_name "Gm28963-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045402.1"; havana_transcript "OTTMUST00000119139.1";
mm10-chrY	HAVANA	exon	57853072	57853257	.	-	.	gene_id "ENSMUSG00000100614.1"; transcript_id "ENSMUST00000187027.1"; gene_type "lincRNA"; gene_name "Gm28963"; transcript_type "lincRNA"; transcript_name "Gm28963-201"; exon_number 1; exon_id "ENSMUSE00001329597.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045402.1"; havana_transcript "OTTMUST00000119139.1";
mm10-chrY	HAVANA	exon	57852405	57852583	.	-	.	gene_id "ENSMUSG00000100614.1"; transcript_id "ENSMUST00000187027.1"; gene_type "lincRNA"; gene_name "Gm28963"; transcript_type "lincRNA"; transcript_name "Gm28963-201"; exon_number 2; exon_id "ENSMUSE00001331546.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045402.1"; havana_transcript "OTTMUST00000119139.1";
mm10-chrY	HAVANA	exon	57850901	57850966	.	-	.	gene_id "ENSMUSG00000100614.1"; transcript_id "ENSMUST00000187027.1"; gene_type "lincRNA"; gene_name "Gm28963"; transcript_type "lincRNA"; transcript_name "Gm28963-201"; exon_number 3; exon_id "ENSMUSE00001325803.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045402.1"; havana_transcript "OTTMUST00000119139.1";
mm10-chrY	HAVANA	gene	58047925	58048452	.	-	.	gene_id "ENSMUSG00000100501.1"; gene_type "lincRNA"; gene_name "Gm29466"; level 2; havana_gene "OTTMUSG00000047400.1";
mm10-chrY	HAVANA	transcript	58047925	58048452	.	-	.	gene_id "ENSMUSG00000100501.1"; transcript_id "ENSMUST00000191077.1"; gene_type "lincRNA"; gene_name "Gm29466"; transcript_type "lincRNA"; transcript_name "Gm29466-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047400.1"; havana_transcript "OTTMUST00000122431.1";
mm10-chrY	HAVANA	exon	58048348	58048452	.	-	.	gene_id "ENSMUSG00000100501.1"; transcript_id "ENSMUST00000191077.1"; gene_type "lincRNA"; gene_name "Gm29466"; transcript_type "lincRNA"; transcript_name "Gm29466-201"; exon_number 1; exon_id "ENSMUSE00001328180.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047400.1"; havana_transcript "OTTMUST00000122431.1";
mm10-chrY	HAVANA	exon	58047925	58047993	.	-	.	gene_id "ENSMUSG00000100501.1"; transcript_id "ENSMUST00000191077.1"; gene_type "lincRNA"; gene_name "Gm29466"; transcript_type "lincRNA"; transcript_name "Gm29466-201"; exon_number 2; exon_id "ENSMUSE00001327517.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047400.1"; havana_transcript "OTTMUST00000122431.1";
mm10-chrY	HAVANA	gene	58080000	58082699	.	-	.	gene_id "ENSMUSG00000100083.6"; gene_type "lincRNA"; gene_name "Gm29467"; level 2; havana_gene "OTTMUSG00000047401.1";
mm10-chrY	HAVANA	transcript	58080000	58082675	.	-	.	gene_id "ENSMUSG00000100083.6"; transcript_id "ENSMUST00000189669.6"; gene_type "lincRNA"; gene_name "Gm29467"; transcript_type "lincRNA"; transcript_name "Gm29467-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047401.1"; havana_transcript "OTTMUST00000122432.1";
mm10-chrY	HAVANA	exon	58082599	58082675	.	-	.	gene_id "ENSMUSG00000100083.6"; transcript_id "ENSMUST00000189669.6"; gene_type "lincRNA"; gene_name "Gm29467"; transcript_type "lincRNA"; transcript_name "Gm29467-202"; exon_number 1; exon_id "ENSMUSE00001323707.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047401.1"; havana_transcript "OTTMUST00000122432.1";
mm10-chrY	HAVANA	exon	58081930	58082111	.	-	.	gene_id "ENSMUSG00000100083.6"; transcript_id "ENSMUST00000189669.6"; gene_type "lincRNA"; gene_name "Gm29467"; transcript_type "lincRNA"; transcript_name "Gm29467-202"; exon_number 2; exon_id "ENSMUSE00001330600.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047401.1"; havana_transcript "OTTMUST00000122432.1";
mm10-chrY	HAVANA	exon	58081018	58081202	.	-	.	gene_id "ENSMUSG00000100083.6"; transcript_id "ENSMUST00000189669.6"; gene_type "lincRNA"; gene_name "Gm29467"; transcript_type "lincRNA"; transcript_name "Gm29467-202"; exon_number 3; exon_id "ENSMUSE00001327605.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047401.1"; havana_transcript "OTTMUST00000122432.1";
mm10-chrY	HAVANA	exon	58080000	58080490	.	-	.	gene_id "ENSMUSG00000100083.6"; transcript_id "ENSMUST00000189669.6"; gene_type "lincRNA"; gene_name "Gm29467"; transcript_type "lincRNA"; transcript_name "Gm29467-202"; exon_number 4; exon_id "ENSMUSE00001323469.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047401.1"; havana_transcript "OTTMUST00000122432.1";
mm10-chrY	HAVANA	transcript	58080422	58082699	.	-	.	gene_id "ENSMUSG00000100083.6"; transcript_id "ENSMUST00000187577.1"; gene_type "lincRNA"; gene_name "Gm29467"; transcript_type "lincRNA"; transcript_name "Gm29467-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047401.1"; havana_transcript "OTTMUST00000122433.1";
mm10-chrY	HAVANA	exon	58082599	58082699	.	-	.	gene_id "ENSMUSG00000100083.6"; transcript_id "ENSMUST00000187577.1"; gene_type "lincRNA"; gene_name "Gm29467"; transcript_type "lincRNA"; transcript_name "Gm29467-201"; exon_number 1; exon_id "ENSMUSE00001330383.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047401.1"; havana_transcript "OTTMUST00000122433.1";
mm10-chrY	HAVANA	exon	58081930	58082111	.	-	.	gene_id "ENSMUSG00000100083.6"; transcript_id "ENSMUST00000187577.1"; gene_type "lincRNA"; gene_name "Gm29467"; transcript_type "lincRNA"; transcript_name "Gm29467-201"; exon_number 2; exon_id "ENSMUSE00001330600.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047401.1"; havana_transcript "OTTMUST00000122433.1";
mm10-chrY	HAVANA	exon	58080422	58080490	.	-	.	gene_id "ENSMUSG00000100083.6"; transcript_id "ENSMUST00000187577.1"; gene_type "lincRNA"; gene_name "Gm29467"; transcript_type "lincRNA"; transcript_name "Gm29467-201"; exon_number 3; exon_id "ENSMUSE00001336092.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047401.1"; havana_transcript "OTTMUST00000122433.1";
mm10-chrY	HAVANA	gene	58368835	58369530	.	-	.	gene_id "ENSMUSG00000101991.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21724"; level 2; havana_gene "OTTMUSG00000045416.1";
mm10-chrY	HAVANA	transcript	58368835	58369530	.	-	.	gene_id "ENSMUSG00000101991.1"; transcript_id "ENSMUST00000188264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21724"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21724-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045416.1"; havana_transcript "OTTMUST00000119179.1";
mm10-chrY	HAVANA	exon	58368835	58369530	.	-	.	gene_id "ENSMUSG00000101991.1"; transcript_id "ENSMUST00000188264.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21724"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21724-201"; exon_number 1; exon_id "ENSMUSE00001327665.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045416.1"; havana_transcript "OTTMUST00000119179.1";
mm10-chrY	HAVANA	gene	58404476	58405003	.	+	.	gene_id "ENSMUSG00000100076.1"; gene_type "lincRNA"; gene_name "Gm20963"; level 2; havana_gene "OTTMUSG00000045496.1";
mm10-chrY	HAVANA	transcript	58404476	58405003	.	+	.	gene_id "ENSMUSG00000100076.1"; transcript_id "ENSMUST00000190880.1"; gene_type "lincRNA"; gene_name "Gm20963"; transcript_type "lincRNA"; transcript_name "Gm20963-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045496.1"; havana_transcript "OTTMUST00000119312.1";
mm10-chrY	HAVANA	exon	58404476	58404580	.	+	.	gene_id "ENSMUSG00000100076.1"; transcript_id "ENSMUST00000190880.1"; gene_type "lincRNA"; gene_name "Gm20963"; transcript_type "lincRNA"; transcript_name "Gm20963-201"; exon_number 1; exon_id "ENSMUSE00001325999.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045496.1"; havana_transcript "OTTMUST00000119312.1";
mm10-chrY	HAVANA	exon	58404935	58405003	.	+	.	gene_id "ENSMUSG00000100076.1"; transcript_id "ENSMUST00000190880.1"; gene_type "lincRNA"; gene_name "Gm20963"; transcript_type "lincRNA"; transcript_name "Gm20963-201"; exon_number 2; exon_id "ENSMUSE00001327392.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045496.1"; havana_transcript "OTTMUST00000119312.1";
mm10-chrY	HAVANA	gene	58427109	58429470	.	+	.	gene_id "ENSMUSG00000101100.6"; gene_type "lincRNA"; gene_name "Gm28326"; level 2; havana_gene "OTTMUSG00000045417.1";
mm10-chrY	HAVANA	transcript	58427109	58429470	.	+	.	gene_id "ENSMUSG00000101100.6"; transcript_id "ENSMUST00000187043.6"; gene_type "lincRNA"; gene_name "Gm28326"; transcript_type "lincRNA"; transcript_name "Gm28326-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045417.1"; havana_transcript "OTTMUST00000119180.1";
mm10-chrY	HAVANA	exon	58427109	58427294	.	+	.	gene_id "ENSMUSG00000101100.6"; transcript_id "ENSMUST00000187043.6"; gene_type "lincRNA"; gene_name "Gm28326"; transcript_type "lincRNA"; transcript_name "Gm28326-201"; exon_number 1; exon_id "ENSMUSE00001322153.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045417.1"; havana_transcript "OTTMUST00000119180.1";
mm10-chrY	HAVANA	exon	58427782	58427963	.	+	.	gene_id "ENSMUSG00000101100.6"; transcript_id "ENSMUST00000187043.6"; gene_type "lincRNA"; gene_name "Gm28326"; transcript_type "lincRNA"; transcript_name "Gm28326-201"; exon_number 2; exon_id "ENSMUSE00001325107.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045417.1"; havana_transcript "OTTMUST00000119180.1";
mm10-chrY	HAVANA	exon	58428692	58428876	.	+	.	gene_id "ENSMUSG00000101100.6"; transcript_id "ENSMUST00000187043.6"; gene_type "lincRNA"; gene_name "Gm28326"; transcript_type "lincRNA"; transcript_name "Gm28326-201"; exon_number 3; exon_id "ENSMUSE00001333763.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045417.1"; havana_transcript "OTTMUST00000119180.1";
mm10-chrY	HAVANA	exon	58429402	58429470	.	+	.	gene_id "ENSMUSG00000101100.6"; transcript_id "ENSMUST00000187043.6"; gene_type "lincRNA"; gene_name "Gm28326"; transcript_type "lincRNA"; transcript_name "Gm28326-201"; exon_number 4; exon_id "ENSMUSE00001329558.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045417.1"; havana_transcript "OTTMUST00000119180.1";
mm10-chrY	HAVANA	transcript	58427109	58429470	.	+	.	gene_id "ENSMUSG00000101100.6"; transcript_id "ENSMUST00000187760.1"; gene_type "lincRNA"; gene_name "Gm28326"; transcript_type "lincRNA"; transcript_name "Gm28326-202"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045417.1"; havana_transcript "OTTMUST00000119181.1";
mm10-chrY	HAVANA	exon	58427109	58427294	.	+	.	gene_id "ENSMUSG00000101100.6"; transcript_id "ENSMUST00000187760.1"; gene_type "lincRNA"; gene_name "Gm28326"; transcript_type "lincRNA"; transcript_name "Gm28326-202"; exon_number 1; exon_id "ENSMUSE00001322153.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045417.1"; havana_transcript "OTTMUST00000119181.1";
mm10-chrY	HAVANA	exon	58427782	58427963	.	+	.	gene_id "ENSMUSG00000101100.6"; transcript_id "ENSMUST00000187760.1"; gene_type "lincRNA"; gene_name "Gm28326"; transcript_type "lincRNA"; transcript_name "Gm28326-202"; exon_number 2; exon_id "ENSMUSE00001325107.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045417.1"; havana_transcript "OTTMUST00000119181.1";
mm10-chrY	HAVANA	exon	58429402	58429470	.	+	.	gene_id "ENSMUSG00000101100.6"; transcript_id "ENSMUST00000187760.1"; gene_type "lincRNA"; gene_name "Gm28326"; transcript_type "lincRNA"; transcript_name "Gm28326-202"; exon_number 3; exon_id "ENSMUSE00001329558.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045417.1"; havana_transcript "OTTMUST00000119181.1";
mm10-chrY	HAVANA	gene	58491793	58494156	.	+	.	gene_id "ENSMUSG00000101744.6"; gene_type "lincRNA"; gene_name "Gm28325"; level 2; havana_gene "OTTMUSG00000045418.1";
mm10-chrY	HAVANA	transcript	58491793	58494156	.	+	.	gene_id "ENSMUSG00000101744.6"; transcript_id "ENSMUST00000185288.6"; gene_type "lincRNA"; gene_name "Gm28325"; transcript_type "lincRNA"; transcript_name "Gm28325-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045418.1"; havana_transcript "OTTMUST00000119182.1";
mm10-chrY	HAVANA	exon	58491793	58491978	.	+	.	gene_id "ENSMUSG00000101744.6"; transcript_id "ENSMUST00000185288.6"; gene_type "lincRNA"; gene_name "Gm28325"; transcript_type "lincRNA"; transcript_name "Gm28325-201"; exon_number 1; exon_id "ENSMUSE00001329103.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045418.1"; havana_transcript "OTTMUST00000119182.1";
mm10-chrY	HAVANA	exon	58492466	58492647	.	+	.	gene_id "ENSMUSG00000101744.6"; transcript_id "ENSMUST00000185288.6"; gene_type "lincRNA"; gene_name "Gm28325"; transcript_type "lincRNA"; transcript_name "Gm28325-201"; exon_number 2; exon_id "ENSMUSE00001323829.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045418.1"; havana_transcript "OTTMUST00000119182.1";
mm10-chrY	HAVANA	exon	58494088	58494156	.	+	.	gene_id "ENSMUSG00000101744.6"; transcript_id "ENSMUST00000185288.6"; gene_type "lincRNA"; gene_name "Gm28325"; transcript_type "lincRNA"; transcript_name "Gm28325-201"; exon_number 3; exon_id "ENSMUSE00001323543.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045418.1"; havana_transcript "OTTMUST00000119182.1";
mm10-chrY	HAVANA	transcript	58491793	58494156	.	+	.	gene_id "ENSMUSG00000101744.6"; transcript_id "ENSMUST00000191481.1"; gene_type "lincRNA"; gene_name "Gm28325"; transcript_type "lincRNA"; transcript_name "Gm28325-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045418.1"; havana_transcript "OTTMUST00000119183.1";
mm10-chrY	HAVANA	exon	58491793	58491978	.	+	.	gene_id "ENSMUSG00000101744.6"; transcript_id "ENSMUST00000191481.1"; gene_type "lincRNA"; gene_name "Gm28325"; transcript_type "lincRNA"; transcript_name "Gm28325-202"; exon_number 1; exon_id "ENSMUSE00001329103.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045418.1"; havana_transcript "OTTMUST00000119183.1";
mm10-chrY	HAVANA	exon	58492466	58492647	.	+	.	gene_id "ENSMUSG00000101744.6"; transcript_id "ENSMUST00000191481.1"; gene_type "lincRNA"; gene_name "Gm28325"; transcript_type "lincRNA"; transcript_name "Gm28325-202"; exon_number 2; exon_id "ENSMUSE00001323829.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045418.1"; havana_transcript "OTTMUST00000119183.1";
mm10-chrY	HAVANA	exon	58493375	58493559	.	+	.	gene_id "ENSMUSG00000101744.6"; transcript_id "ENSMUST00000191481.1"; gene_type "lincRNA"; gene_name "Gm28325"; transcript_type "lincRNA"; transcript_name "Gm28325-202"; exon_number 3; exon_id "ENSMUSE00001318548.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045418.1"; havana_transcript "OTTMUST00000119183.1";
mm10-chrY	HAVANA	exon	58494088	58494156	.	+	.	gene_id "ENSMUSG00000101744.6"; transcript_id "ENSMUST00000191481.1"; gene_type "lincRNA"; gene_name "Gm28325"; transcript_type "lincRNA"; transcript_name "Gm28325-202"; exon_number 4; exon_id "ENSMUSE00001323543.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045418.1"; havana_transcript "OTTMUST00000119183.1";
mm10-chrY	HAVANA	gene	58573017	58599050	.	+	.	gene_id "ENSMUSG00000095807.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; level 2; havana_gene "OTTMUSG00000045420.2";
mm10-chrY	HAVANA	transcript	58573017	58599050	.	+	.	gene_id "ENSMUSG00000095807.2"; transcript_id "ENSMUST00000179024.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21405-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045420.2"; havana_transcript "OTTMUST00000119305.1";
mm10-chrY	HAVANA	exon	58573017	58573060	.	+	.	gene_id "ENSMUSG00000095807.2"; transcript_id "ENSMUST00000179024.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21405-201"; exon_number 1; exon_id "ENSMUSE00001318267.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045420.2"; havana_transcript "OTTMUST00000119305.1";
mm10-chrY	HAVANA	exon	58574441	58574572	.	+	.	gene_id "ENSMUSG00000095807.2"; transcript_id "ENSMUST00000179024.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21405-201"; exon_number 2; exon_id "ENSMUSE00001069626.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045420.2"; havana_transcript "OTTMUST00000119305.1";
mm10-chrY	HAVANA	exon	58579882	58579948	.	+	.	gene_id "ENSMUSG00000095807.2"; transcript_id "ENSMUST00000179024.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21405-201"; exon_number 3; exon_id "ENSMUSE00001002424.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045420.2"; havana_transcript "OTTMUST00000119305.1";
mm10-chrY	HAVANA	exon	58580524	58580558	.	+	.	gene_id "ENSMUSG00000095807.2"; transcript_id "ENSMUST00000179024.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21405-201"; exon_number 4; exon_id "ENSMUSE00001074146.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045420.2"; havana_transcript "OTTMUST00000119305.1";
mm10-chrY	HAVANA	exon	58587572	58587638	.	+	.	gene_id "ENSMUSG00000095807.2"; transcript_id "ENSMUST00000179024.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21405-201"; exon_number 5; exon_id "ENSMUSE00000978499.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045420.2"; havana_transcript "OTTMUST00000119305.1";
mm10-chrY	HAVANA	exon	58588200	58588234	.	+	.	gene_id "ENSMUSG00000095807.2"; transcript_id "ENSMUST00000179024.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21405-201"; exon_number 6; exon_id "ENSMUSE00000964376.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045420.2"; havana_transcript "OTTMUST00000119305.1";
mm10-chrY	HAVANA	exon	58595375	58595492	.	+	.	gene_id "ENSMUSG00000095807.2"; transcript_id "ENSMUST00000179024.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21405-201"; exon_number 7; exon_id "ENSMUSE00001044488.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045420.2"; havana_transcript "OTTMUST00000119305.1";
mm10-chrY	HAVANA	exon	58596238	58596337	.	+	.	gene_id "ENSMUSG00000095807.2"; transcript_id "ENSMUST00000179024.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21405-201"; exon_number 8; exon_id "ENSMUSE00001059556.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045420.2"; havana_transcript "OTTMUST00000119305.1";
mm10-chrY	HAVANA	exon	58598360	58598456	.	+	.	gene_id "ENSMUSG00000095807.2"; transcript_id "ENSMUST00000179024.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21405-201"; exon_number 9; exon_id "ENSMUSE00001318351.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045420.2"; havana_transcript "OTTMUST00000119305.1";
mm10-chrY	HAVANA	exon	58598816	58599050	.	+	.	gene_id "ENSMUSG00000095807.2"; transcript_id "ENSMUST00000179024.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21405"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21405-201"; exon_number 10; exon_id "ENSMUSE00001325064.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045420.2"; havana_transcript "OTTMUST00000119305.1";
mm10-chrY	HAVANA	gene	58688586	58691821	.	-	.	gene_id "ENSMUSG00000101317.1"; gene_type "lincRNA"; gene_name "Gm28284"; level 2; havana_gene "OTTMUSG00000045497.1";
mm10-chrY	HAVANA	transcript	58688586	58691821	.	-	.	gene_id "ENSMUSG00000101317.1"; transcript_id "ENSMUST00000190221.1"; gene_type "lincRNA"; gene_name "Gm28284"; transcript_type "lincRNA"; transcript_name "Gm28284-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045497.1"; havana_transcript "OTTMUST00000119313.1";
mm10-chrY	HAVANA	exon	58691184	58691821	.	-	.	gene_id "ENSMUSG00000101317.1"; transcript_id "ENSMUST00000190221.1"; gene_type "lincRNA"; gene_name "Gm28284"; transcript_type "lincRNA"; transcript_name "Gm28284-202"; exon_number 1; exon_id "ENSMUSE00001333520.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045497.1"; havana_transcript "OTTMUST00000119313.1";
mm10-chrY	HAVANA	exon	58690515	58690700	.	-	.	gene_id "ENSMUSG00000101317.1"; transcript_id "ENSMUST00000190221.1"; gene_type "lincRNA"; gene_name "Gm28284"; transcript_type "lincRNA"; transcript_name "Gm28284-202"; exon_number 2; exon_id "ENSMUSE00001329319.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045497.1"; havana_transcript "OTTMUST00000119313.1";
mm10-chrY	HAVANA	exon	58689604	58689787	.	-	.	gene_id "ENSMUSG00000101317.1"; transcript_id "ENSMUST00000190221.1"; gene_type "lincRNA"; gene_name "Gm28284"; transcript_type "lincRNA"; transcript_name "Gm28284-202"; exon_number 3; exon_id "ENSMUSE00001333127.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045497.1"; havana_transcript "OTTMUST00000119313.1";
mm10-chrY	HAVANA	exon	58688586	58689075	.	-	.	gene_id "ENSMUSG00000101317.1"; transcript_id "ENSMUST00000190221.1"; gene_type "lincRNA"; gene_name "Gm28284"; transcript_type "lincRNA"; transcript_name "Gm28284-202"; exon_number 4; exon_id "ENSMUSE00001334245.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045497.1"; havana_transcript "OTTMUST00000119313.1";
mm10-chrY	HAVANA	transcript	58689007	58691369	.	-	.	gene_id "ENSMUSG00000101317.1"; transcript_id "ENSMUST00000186673.1"; gene_type "lincRNA"; gene_name "Gm28284"; transcript_type "lincRNA"; transcript_name "Gm28284-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045497.1"; havana_transcript "OTTMUST00000119314.1";
mm10-chrY	HAVANA	exon	58691184	58691369	.	-	.	gene_id "ENSMUSG00000101317.1"; transcript_id "ENSMUST00000186673.1"; gene_type "lincRNA"; gene_name "Gm28284"; transcript_type "lincRNA"; transcript_name "Gm28284-201"; exon_number 1; exon_id "ENSMUSE00001327601.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045497.1"; havana_transcript "OTTMUST00000119314.1";
mm10-chrY	HAVANA	exon	58690515	58690696	.	-	.	gene_id "ENSMUSG00000101317.1"; transcript_id "ENSMUST00000186673.1"; gene_type "lincRNA"; gene_name "Gm28284"; transcript_type "lincRNA"; transcript_name "Gm28284-201"; exon_number 2; exon_id "ENSMUSE00001331060.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045497.1"; havana_transcript "OTTMUST00000119314.1";
mm10-chrY	HAVANA	exon	58689007	58689075	.	-	.	gene_id "ENSMUSG00000101317.1"; transcript_id "ENSMUST00000186673.1"; gene_type "lincRNA"; gene_name "Gm28284"; transcript_type "lincRNA"; transcript_name "Gm28284-201"; exon_number 3; exon_id "ENSMUSE00001324558.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045497.1"; havana_transcript "OTTMUST00000119314.1";
mm10-chrY	HAVANA	gene	58717540	58720772	.	-	.	gene_id "ENSMUSG00000101244.6"; gene_type "lincRNA"; gene_name "Gm29368"; level 2; havana_gene "OTTMUSG00000045492.1";
mm10-chrY	HAVANA	transcript	58717540	58720772	.	-	.	gene_id "ENSMUSG00000101244.6"; transcript_id "ENSMUST00000187201.6"; gene_type "lincRNA"; gene_name "Gm29368"; transcript_type "lincRNA"; transcript_name "Gm29368-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045492.1"; havana_transcript "OTTMUST00000119306.1";
mm10-chrY	HAVANA	exon	58720134	58720772	.	-	.	gene_id "ENSMUSG00000101244.6"; transcript_id "ENSMUST00000187201.6"; gene_type "lincRNA"; gene_name "Gm29368"; transcript_type "lincRNA"; transcript_name "Gm29368-201"; exon_number 1; exon_id "ENSMUSE00001334637.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045492.1"; havana_transcript "OTTMUST00000119306.1";
mm10-chrY	HAVANA	exon	58719467	58719645	.	-	.	gene_id "ENSMUSG00000101244.6"; transcript_id "ENSMUST00000187201.6"; gene_type "lincRNA"; gene_name "Gm29368"; transcript_type "lincRNA"; transcript_name "Gm29368-201"; exon_number 2; exon_id "ENSMUSE00001325130.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045492.1"; havana_transcript "OTTMUST00000119306.1";
mm10-chrY	HAVANA	exon	58718557	58718737	.	-	.	gene_id "ENSMUSG00000101244.6"; transcript_id "ENSMUST00000187201.6"; gene_type "lincRNA"; gene_name "Gm29368"; transcript_type "lincRNA"; transcript_name "Gm29368-201"; exon_number 3; exon_id "ENSMUSE00001324800.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045492.1"; havana_transcript "OTTMUST00000119306.1";
mm10-chrY	HAVANA	exon	58717540	58718029	.	-	.	gene_id "ENSMUSG00000101244.6"; transcript_id "ENSMUST00000187201.6"; gene_type "lincRNA"; gene_name "Gm29368"; transcript_type "lincRNA"; transcript_name "Gm29368-201"; exon_number 4; exon_id "ENSMUSE00001330852.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045492.1"; havana_transcript "OTTMUST00000119306.1";
mm10-chrY	HAVANA	transcript	58717964	58720319	.	-	.	gene_id "ENSMUSG00000101244.6"; transcript_id "ENSMUST00000190344.1"; gene_type "lincRNA"; gene_name "Gm29368"; transcript_type "lincRNA"; transcript_name "Gm29368-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045492.1"; havana_transcript "OTTMUST00000119307.1";
mm10-chrY	HAVANA	exon	58720134	58720319	.	-	.	gene_id "ENSMUSG00000101244.6"; transcript_id "ENSMUST00000190344.1"; gene_type "lincRNA"; gene_name "Gm29368"; transcript_type "lincRNA"; transcript_name "Gm29368-202"; exon_number 1; exon_id "ENSMUSE00001322625.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045492.1"; havana_transcript "OTTMUST00000119307.1";
mm10-chrY	HAVANA	exon	58719467	58719645	.	-	.	gene_id "ENSMUSG00000101244.6"; transcript_id "ENSMUST00000190344.1"; gene_type "lincRNA"; gene_name "Gm29368"; transcript_type "lincRNA"; transcript_name "Gm29368-202"; exon_number 2; exon_id "ENSMUSE00001325130.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045492.1"; havana_transcript "OTTMUST00000119307.1";
mm10-chrY	HAVANA	exon	58717964	58718029	.	-	.	gene_id "ENSMUSG00000101244.6"; transcript_id "ENSMUST00000190344.1"; gene_type "lincRNA"; gene_name "Gm29368"; transcript_type "lincRNA"; transcript_name "Gm29368-202"; exon_number 3; exon_id "ENSMUSE00001320743.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045492.1"; havana_transcript "OTTMUST00000119307.1";
mm10-chrY	HAVANA	gene	58782567	58814597	.	-	.	gene_id "ENSMUSG00000096626.7"; gene_type "protein_coding"; gene_name "Gm21861"; level 2; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	HAVANA	transcript	58782567	58814597	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	exon	58814554	58814597	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 1; exon_id "ENSMUSE00001334785.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	exon	58813057	58813188	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 2; exon_id "ENSMUSE00001324136.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	CDS	58813057	58813174	.	-	0	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 2; exon_id "ENSMUSE00001324136.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	start_codon	58813172	58813174	.	-	0	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 2; exon_id "ENSMUSE00001324136.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	exon	58801658	58801724	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 3; exon_id "ENSMUSE00000995110.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	CDS	58801658	58801724	.	-	2	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 3; exon_id "ENSMUSE00000995110.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	exon	58801073	58801107	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 4; exon_id "ENSMUSE00001045492.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	CDS	58801073	58801107	.	-	1	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 4; exon_id "ENSMUSE00001045492.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	exon	58793988	58794054	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 5; exon_id "ENSMUSE00001030493.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	CDS	58793988	58794054	.	-	2	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 5; exon_id "ENSMUSE00001030493.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	exon	58793390	58793424	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 6; exon_id "ENSMUSE00001005636.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	CDS	58793390	58793424	.	-	1	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 6; exon_id "ENSMUSE00001005636.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	exon	58786126	58786243	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 7; exon_id "ENSMUSE00001066183.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	CDS	58786126	58786243	.	-	2	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 7; exon_id "ENSMUSE00001066183.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	exon	58785274	58785373	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 8; exon_id "ENSMUSE00001323827.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	CDS	58785274	58785373	.	-	1	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 8; exon_id "ENSMUSE00001323827.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	exon	58783159	58783257	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 9; exon_id "ENSMUSE00001320127.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	CDS	58783159	58783257	.	-	0	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 9; exon_id "ENSMUSE00001320127.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	exon	58782567	58782800	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 10; exon_id "ENSMUSE00001333598.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	CDS	58782774	58782800	.	-	0	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 10; exon_id "ENSMUSE00001333598.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	stop_codon	58782771	58782773	.	-	0	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 10; exon_id "ENSMUSE00001333598.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	UTR	58814554	58814597	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 1; exon_id "ENSMUSE00001334785.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	UTR	58813175	58813188	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 2; exon_id "ENSMUSE00001324136.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	HAVANA	UTR	58782567	58782773	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000190806.6"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-202"; exon_number 10; exon_id "ENSMUSE00001333598.1"; level 2; protein_id "ENSMUSP00000139535.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045442.3"; havana_transcript "OTTMUST00000119220.3";
mm10-chrY	ENSEMBL	transcript	58785307	58813165	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	exon	58813057	58813165	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 1; exon_id "ENSMUSE00001075244.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	CDS	58813057	58813165	.	-	0	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 1; exon_id "ENSMUSE00001075244.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	start_codon	58813163	58813165	.	-	0	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 1; exon_id "ENSMUSE00001075244.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	exon	58801658	58801724	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 2; exon_id "ENSMUSE00000995110.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	CDS	58801658	58801724	.	-	2	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 2; exon_id "ENSMUSE00000995110.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	exon	58801073	58801107	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 3; exon_id "ENSMUSE00001045492.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	CDS	58801073	58801107	.	-	1	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 3; exon_id "ENSMUSE00001045492.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	exon	58793988	58794054	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 4; exon_id "ENSMUSE00001030493.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	CDS	58793988	58794054	.	-	2	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 4; exon_id "ENSMUSE00001030493.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	exon	58793390	58793424	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 5; exon_id "ENSMUSE00001005636.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	CDS	58793390	58793424	.	-	1	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 5; exon_id "ENSMUSE00001005636.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	exon	58786126	58786243	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 6; exon_id "ENSMUSE00001066183.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	CDS	58786126	58786243	.	-	2	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 6; exon_id "ENSMUSE00001066183.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	exon	58785307	58785373	.	-	.	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 7; exon_id "ENSMUSE00000977188.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	ENSEMBL	CDS	58785307	58785373	.	-	1	gene_id "ENSMUSG00000096626.7"; transcript_id "ENSMUST00000179480.1"; gene_type "protein_coding"; gene_name "Gm21861"; transcript_type "protein_coding"; transcript_name "Gm21861-201"; exon_number 7; exon_id "ENSMUSE00000977188.1"; level 3; protein_id "ENSMUSP00000137215.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045442.3";
mm10-chrY	HAVANA	gene	58914727	58915254	.	-	.	gene_id "ENSMUSG00000100085.1"; gene_type "lincRNA"; gene_name "Gm21413"; level 2; havana_gene "OTTMUSG00000045443.1";
mm10-chrY	HAVANA	transcript	58914727	58915254	.	-	.	gene_id "ENSMUSG00000100085.1"; transcript_id "ENSMUST00000189224.1"; gene_type "lincRNA"; gene_name "Gm21413"; transcript_type "lincRNA"; transcript_name "Gm21413-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045443.1"; havana_transcript "OTTMUST00000119222.1";
mm10-chrY	HAVANA	exon	58915150	58915254	.	-	.	gene_id "ENSMUSG00000100085.1"; transcript_id "ENSMUST00000189224.1"; gene_type "lincRNA"; gene_name "Gm21413"; transcript_type "lincRNA"; transcript_name "Gm21413-201"; exon_number 1; exon_id "ENSMUSE00001330599.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045443.1"; havana_transcript "OTTMUST00000119222.1";
mm10-chrY	HAVANA	exon	58914727	58914795	.	-	.	gene_id "ENSMUSG00000100085.1"; transcript_id "ENSMUST00000189224.1"; gene_type "lincRNA"; gene_name "Gm21413"; transcript_type "lincRNA"; transcript_name "Gm21413-201"; exon_number 2; exon_id "ENSMUSE00001330949.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045443.1"; havana_transcript "OTTMUST00000119222.1";
mm10-chrY	HAVANA	gene	58956281	58958645	.	-	.	gene_id "ENSMUSG00000101424.6"; gene_type "lincRNA"; gene_name "Gm28073"; level 2; havana_gene "OTTMUSG00000045444.1";
mm10-chrY	HAVANA	transcript	58956281	58958645	.	-	.	gene_id "ENSMUSG00000101424.6"; transcript_id "ENSMUST00000187174.6"; gene_type "lincRNA"; gene_name "Gm28073"; transcript_type "lincRNA"; transcript_name "Gm28073-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045444.1"; havana_transcript "OTTMUST00000119223.1";
mm10-chrY	HAVANA	exon	58958460	58958645	.	-	.	gene_id "ENSMUSG00000101424.6"; transcript_id "ENSMUST00000187174.6"; gene_type "lincRNA"; gene_name "Gm28073"; transcript_type "lincRNA"; transcript_name "Gm28073-201"; exon_number 1; exon_id "ENSMUSE00001318988.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045444.1"; havana_transcript "OTTMUST00000119223.1";
mm10-chrY	HAVANA	exon	58957791	58957972	.	-	.	gene_id "ENSMUSG00000101424.6"; transcript_id "ENSMUST00000187174.6"; gene_type "lincRNA"; gene_name "Gm28073"; transcript_type "lincRNA"; transcript_name "Gm28073-201"; exon_number 2; exon_id "ENSMUSE00001322230.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045444.1"; havana_transcript "OTTMUST00000119223.1";
mm10-chrY	HAVANA	exon	58956878	58957062	.	-	.	gene_id "ENSMUSG00000101424.6"; transcript_id "ENSMUST00000187174.6"; gene_type "lincRNA"; gene_name "Gm28073"; transcript_type "lincRNA"; transcript_name "Gm28073-201"; exon_number 3; exon_id "ENSMUSE00001323596.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045444.1"; havana_transcript "OTTMUST00000119223.1";
mm10-chrY	HAVANA	exon	58956281	58956349	.	-	.	gene_id "ENSMUSG00000101424.6"; transcript_id "ENSMUST00000187174.6"; gene_type "lincRNA"; gene_name "Gm28073"; transcript_type "lincRNA"; transcript_name "Gm28073-201"; exon_number 4; exon_id "ENSMUSE00001335821.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045444.1"; havana_transcript "OTTMUST00000119223.1";
mm10-chrY	HAVANA	transcript	58956281	58958645	.	-	.	gene_id "ENSMUSG00000101424.6"; transcript_id "ENSMUST00000190508.1"; gene_type "lincRNA"; gene_name "Gm28073"; transcript_type "lincRNA"; transcript_name "Gm28073-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045444.1"; havana_transcript "OTTMUST00000119224.1";
mm10-chrY	HAVANA	exon	58958460	58958645	.	-	.	gene_id "ENSMUSG00000101424.6"; transcript_id "ENSMUST00000190508.1"; gene_type "lincRNA"; gene_name "Gm28073"; transcript_type "lincRNA"; transcript_name "Gm28073-202"; exon_number 1; exon_id "ENSMUSE00001318988.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045444.1"; havana_transcript "OTTMUST00000119224.1";
mm10-chrY	HAVANA	exon	58957791	58957972	.	-	.	gene_id "ENSMUSG00000101424.6"; transcript_id "ENSMUST00000190508.1"; gene_type "lincRNA"; gene_name "Gm28073"; transcript_type "lincRNA"; transcript_name "Gm28073-202"; exon_number 2; exon_id "ENSMUSE00001322230.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045444.1"; havana_transcript "OTTMUST00000119224.1";
mm10-chrY	HAVANA	exon	58956281	58956349	.	-	.	gene_id "ENSMUSG00000101424.6"; transcript_id "ENSMUST00000190508.1"; gene_type "lincRNA"; gene_name "Gm28073"; transcript_type "lincRNA"; transcript_name "Gm28073-202"; exon_number 3; exon_id "ENSMUSE00001335821.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045444.1"; havana_transcript "OTTMUST00000119224.1";
mm10-chrY	HAVANA	gene	58980963	58981489	.	-	.	gene_id "ENSMUSG00000100264.1"; gene_type "lincRNA"; gene_name "Gm21419"; level 2; havana_gene "OTTMUSG00000045445.1";
mm10-chrY	HAVANA	transcript	58980963	58981489	.	-	.	gene_id "ENSMUSG00000100264.1"; transcript_id "ENSMUST00000189495.1"; gene_type "lincRNA"; gene_name "Gm21419"; transcript_type "lincRNA"; transcript_name "Gm21419-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045445.1"; havana_transcript "OTTMUST00000119225.1";
mm10-chrY	HAVANA	exon	58981385	58981489	.	-	.	gene_id "ENSMUSG00000100264.1"; transcript_id "ENSMUST00000189495.1"; gene_type "lincRNA"; gene_name "Gm21419"; transcript_type "lincRNA"; transcript_name "Gm21419-201"; exon_number 1; exon_id "ENSMUSE00001323852.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045445.1"; havana_transcript "OTTMUST00000119225.1";
mm10-chrY	HAVANA	exon	58980963	58981030	.	-	.	gene_id "ENSMUSG00000100264.1"; transcript_id "ENSMUST00000189495.1"; gene_type "lincRNA"; gene_name "Gm21419"; transcript_type "lincRNA"; transcript_name "Gm21419-201"; exon_number 2; exon_id "ENSMUSE00001324936.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045445.1"; havana_transcript "OTTMUST00000119225.1";
mm10-chrY	HAVANA	gene	59022160	59025399	.	-	.	gene_id "ENSMUSG00000100715.6"; gene_type "lincRNA"; gene_name "Gm28074"; level 2; havana_gene "OTTMUSG00000045446.1";
mm10-chrY	HAVANA	transcript	59022160	59025399	.	-	.	gene_id "ENSMUSG00000100715.6"; transcript_id "ENSMUST00000190424.6"; gene_type "lincRNA"; gene_name "Gm28074"; transcript_type "lincRNA"; transcript_name "Gm28074-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045446.1"; havana_transcript "OTTMUST00000119226.1";
mm10-chrY	HAVANA	exon	59024761	59025399	.	-	.	gene_id "ENSMUSG00000100715.6"; transcript_id "ENSMUST00000190424.6"; gene_type "lincRNA"; gene_name "Gm28074"; transcript_type "lincRNA"; transcript_name "Gm28074-201"; exon_number 1; exon_id "ENSMUSE00001329058.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045446.1"; havana_transcript "OTTMUST00000119226.1";
mm10-chrY	HAVANA	exon	59024092	59024273	.	-	.	gene_id "ENSMUSG00000100715.6"; transcript_id "ENSMUST00000190424.6"; gene_type "lincRNA"; gene_name "Gm28074"; transcript_type "lincRNA"; transcript_name "Gm28074-201"; exon_number 2; exon_id "ENSMUSE00001318415.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045446.1"; havana_transcript "OTTMUST00000119226.1";
mm10-chrY	HAVANA	exon	59023179	59023363	.	-	.	gene_id "ENSMUSG00000100715.6"; transcript_id "ENSMUST00000190424.6"; gene_type "lincRNA"; gene_name "Gm28074"; transcript_type "lincRNA"; transcript_name "Gm28074-201"; exon_number 3; exon_id "ENSMUSE00001319138.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045446.1"; havana_transcript "OTTMUST00000119226.1";
mm10-chrY	HAVANA	exon	59022160	59022650	.	-	.	gene_id "ENSMUSG00000100715.6"; transcript_id "ENSMUST00000190424.6"; gene_type "lincRNA"; gene_name "Gm28074"; transcript_type "lincRNA"; transcript_name "Gm28074-201"; exon_number 4; exon_id "ENSMUSE00001333214.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045446.1"; havana_transcript "OTTMUST00000119226.1";
mm10-chrY	HAVANA	transcript	59022582	59024946	.	-	.	gene_id "ENSMUSG00000100715.6"; transcript_id "ENSMUST00000190765.1"; gene_type "lincRNA"; gene_name "Gm28074"; transcript_type "lincRNA"; transcript_name "Gm28074-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045446.1"; havana_transcript "OTTMUST00000119227.1";
mm10-chrY	HAVANA	exon	59024761	59024946	.	-	.	gene_id "ENSMUSG00000100715.6"; transcript_id "ENSMUST00000190765.1"; gene_type "lincRNA"; gene_name "Gm28074"; transcript_type "lincRNA"; transcript_name "Gm28074-202"; exon_number 1; exon_id "ENSMUSE00001320723.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045446.1"; havana_transcript "OTTMUST00000119227.1";
mm10-chrY	HAVANA	exon	59024092	59024273	.	-	.	gene_id "ENSMUSG00000100715.6"; transcript_id "ENSMUST00000190765.1"; gene_type "lincRNA"; gene_name "Gm28074"; transcript_type "lincRNA"; transcript_name "Gm28074-202"; exon_number 2; exon_id "ENSMUSE00001318415.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045446.1"; havana_transcript "OTTMUST00000119227.1";
mm10-chrY	HAVANA	exon	59022582	59022650	.	-	.	gene_id "ENSMUSG00000100715.6"; transcript_id "ENSMUST00000190765.1"; gene_type "lincRNA"; gene_name "Gm28074"; transcript_type "lincRNA"; transcript_name "Gm28074-202"; exon_number 3; exon_id "ENSMUSE00001321308.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045446.1"; havana_transcript "OTTMUST00000119227.1";
mm10-chrY	HAVANA	gene	59047279	59047806	.	-	.	gene_id "ENSMUSG00000100582.1"; gene_type "lincRNA"; gene_name "Gm21428"; level 2; havana_gene "OTTMUSG00000045447.1";
mm10-chrY	HAVANA	transcript	59047279	59047806	.	-	.	gene_id "ENSMUSG00000100582.1"; transcript_id "ENSMUST00000186550.1"; gene_type "lincRNA"; gene_name "Gm21428"; transcript_type "lincRNA"; transcript_name "Gm21428-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045447.1"; havana_transcript "OTTMUST00000119228.1";
mm10-chrY	HAVANA	exon	59047702	59047806	.	-	.	gene_id "ENSMUSG00000100582.1"; transcript_id "ENSMUST00000186550.1"; gene_type "lincRNA"; gene_name "Gm21428"; transcript_type "lincRNA"; transcript_name "Gm21428-201"; exon_number 1; exon_id "ENSMUSE00001324748.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045447.1"; havana_transcript "OTTMUST00000119228.1";
mm10-chrY	HAVANA	exon	59047279	59047347	.	-	.	gene_id "ENSMUSG00000100582.1"; transcript_id "ENSMUST00000186550.1"; gene_type "lincRNA"; gene_name "Gm21428"; transcript_type "lincRNA"; transcript_name "Gm21428-201"; exon_number 2; exon_id "ENSMUSE00001322483.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045447.1"; havana_transcript "OTTMUST00000119228.1";
mm10-chrY	HAVANA	gene	59085108	59087386	.	-	.	gene_id "ENSMUSG00000099551.6"; gene_type "processed_transcript"; gene_name "Gm28072"; level 2; havana_gene "OTTMUSG00000045448.1";
mm10-chrY	HAVANA	transcript	59085108	59087386	.	-	.	gene_id "ENSMUSG00000099551.6"; transcript_id "ENSMUST00000190486.6"; gene_type "processed_transcript"; gene_name "Gm28072"; transcript_type "lincRNA"; transcript_name "Gm28072-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045448.1"; havana_transcript "OTTMUST00000119229.1";
mm10-chrY	HAVANA	exon	59087286	59087386	.	-	.	gene_id "ENSMUSG00000099551.6"; transcript_id "ENSMUST00000190486.6"; gene_type "processed_transcript"; gene_name "Gm28072"; transcript_type "lincRNA"; transcript_name "Gm28072-202"; exon_number 1; exon_id "ENSMUSE00001332789.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045448.1"; havana_transcript "OTTMUST00000119229.1";
mm10-chrY	HAVANA	exon	59086617	59086798	.	-	.	gene_id "ENSMUSG00000099551.6"; transcript_id "ENSMUST00000190486.6"; gene_type "processed_transcript"; gene_name "Gm28072"; transcript_type "lincRNA"; transcript_name "Gm28072-202"; exon_number 2; exon_id "ENSMUSE00001332045.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045448.1"; havana_transcript "OTTMUST00000119229.1";
mm10-chrY	HAVANA	exon	59085108	59085176	.	-	.	gene_id "ENSMUSG00000099551.6"; transcript_id "ENSMUST00000190486.6"; gene_type "processed_transcript"; gene_name "Gm28072"; transcript_type "lincRNA"; transcript_name "Gm28072-202"; exon_number 3; exon_id "ENSMUSE00001329232.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045448.1"; havana_transcript "OTTMUST00000119229.1";
mm10-chrY	HAVANA	transcript	59085108	59087386	.	-	.	gene_id "ENSMUSG00000099551.6"; transcript_id "ENSMUST00000186521.1"; gene_type "processed_transcript"; gene_name "Gm28072"; transcript_type "processed_transcript"; transcript_name "Gm28072-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045448.1"; havana_transcript "OTTMUST00000119230.1";
mm10-chrY	HAVANA	exon	59087286	59087386	.	-	.	gene_id "ENSMUSG00000099551.6"; transcript_id "ENSMUST00000186521.1"; gene_type "processed_transcript"; gene_name "Gm28072"; transcript_type "processed_transcript"; transcript_name "Gm28072-201"; exon_number 1; exon_id "ENSMUSE00001332789.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045448.1"; havana_transcript "OTTMUST00000119230.1";
mm10-chrY	HAVANA	exon	59086617	59086798	.	-	.	gene_id "ENSMUSG00000099551.6"; transcript_id "ENSMUST00000186521.1"; gene_type "processed_transcript"; gene_name "Gm28072"; transcript_type "processed_transcript"; transcript_name "Gm28072-201"; exon_number 2; exon_id "ENSMUSE00001332045.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045448.1"; havana_transcript "OTTMUST00000119230.1";
mm10-chrY	HAVANA	exon	59085704	59085888	.	-	.	gene_id "ENSMUSG00000099551.6"; transcript_id "ENSMUST00000186521.1"; gene_type "processed_transcript"; gene_name "Gm28072"; transcript_type "processed_transcript"; transcript_name "Gm28072-201"; exon_number 3; exon_id "ENSMUSE00001329300.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045448.1"; havana_transcript "OTTMUST00000119230.1";
mm10-chrY	HAVANA	exon	59085108	59085176	.	-	.	gene_id "ENSMUSG00000099551.6"; transcript_id "ENSMUST00000186521.1"; gene_type "processed_transcript"; gene_name "Gm28072"; transcript_type "processed_transcript"; transcript_name "Gm28072-201"; exon_number 4; exon_id "ENSMUSE00001329232.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045448.1"; havana_transcript "OTTMUST00000119230.1";
mm10-chrY	HAVANA	gene	59395263	59427276	.	+	.	gene_id "ENSMUSG00000096347.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; level 2; havana_gene "OTTMUSG00000045449.2";
mm10-chrY	HAVANA	transcript	59395263	59427276	.	+	.	gene_id "ENSMUSG00000096347.2"; transcript_id "ENSMUST00000179336.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21758-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045449.2"; havana_transcript "OTTMUST00000122495.1";
mm10-chrY	HAVANA	exon	59395263	59395308	.	+	.	gene_id "ENSMUSG00000096347.2"; transcript_id "ENSMUST00000179336.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21758-201"; exon_number 1; exon_id "ENSMUSE00001319112.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045449.2"; havana_transcript "OTTMUST00000122495.1";
mm10-chrY	HAVANA	exon	59396668	59396799	.	+	.	gene_id "ENSMUSG00000096347.2"; transcript_id "ENSMUST00000179336.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21758-201"; exon_number 2; exon_id "ENSMUSE00001078679.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045449.2"; havana_transcript "OTTMUST00000122495.1";
mm10-chrY	HAVANA	exon	59408231	59408297	.	+	.	gene_id "ENSMUSG00000096347.2"; transcript_id "ENSMUST00000179336.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21758-201"; exon_number 3; exon_id "ENSMUSE00001040390.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045449.2"; havana_transcript "OTTMUST00000122495.1";
mm10-chrY	HAVANA	exon	59408864	59408898	.	+	.	gene_id "ENSMUSG00000096347.2"; transcript_id "ENSMUST00000179336.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21758-201"; exon_number 4; exon_id "ENSMUSE00001091626.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045449.2"; havana_transcript "OTTMUST00000122495.1";
mm10-chrY	HAVANA	exon	59415936	59416002	.	+	.	gene_id "ENSMUSG00000096347.2"; transcript_id "ENSMUST00000179336.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21758-201"; exon_number 5; exon_id "ENSMUSE00001007816.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045449.2"; havana_transcript "OTTMUST00000122495.1";
mm10-chrY	HAVANA	exon	59416564	59416598	.	+	.	gene_id "ENSMUSG00000096347.2"; transcript_id "ENSMUST00000179336.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21758-201"; exon_number 6; exon_id "ENSMUSE00001001499.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045449.2"; havana_transcript "OTTMUST00000122495.1";
mm10-chrY	HAVANA	exon	59423718	59423835	.	+	.	gene_id "ENSMUSG00000096347.2"; transcript_id "ENSMUST00000179336.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21758-201"; exon_number 7; exon_id "ENSMUSE00000971092.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045449.2"; havana_transcript "OTTMUST00000122495.1";
mm10-chrY	HAVANA	exon	59424587	59424686	.	+	.	gene_id "ENSMUSG00000096347.2"; transcript_id "ENSMUST00000179336.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21758-201"; exon_number 8; exon_id "ENSMUSE00001063912.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045449.2"; havana_transcript "OTTMUST00000122495.1";
mm10-chrY	HAVANA	exon	59426700	59426798	.	+	.	gene_id "ENSMUSG00000096347.2"; transcript_id "ENSMUST00000179336.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21758-201"; exon_number 9; exon_id "ENSMUSE00001335076.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045449.2"; havana_transcript "OTTMUST00000122495.1";
mm10-chrY	HAVANA	exon	59427157	59427276	.	+	.	gene_id "ENSMUSG00000096347.2"; transcript_id "ENSMUST00000179336.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21758"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21758-201"; exon_number 10; exon_id "ENSMUSE00001328085.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045449.2"; havana_transcript "OTTMUST00000122495.1";
mm10-chrY	HAVANA	gene	59489253	59492035	.	+	.	gene_id "ENSMUSG00000101531.6"; gene_type "lincRNA"; gene_name "Gm29672"; level 2; havana_gene "OTTMUSG00000045450.1";
mm10-chrY	HAVANA	transcript	59489253	59491609	.	+	.	gene_id "ENSMUSG00000101531.6"; transcript_id "ENSMUST00000191119.6"; gene_type "lincRNA"; gene_name "Gm29672"; transcript_type "lincRNA"; transcript_name "Gm29672-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045450.1"; havana_transcript "OTTMUST00000119233.1";
mm10-chrY	HAVANA	exon	59489253	59489438	.	+	.	gene_id "ENSMUSG00000101531.6"; transcript_id "ENSMUST00000191119.6"; gene_type "lincRNA"; gene_name "Gm29672"; transcript_type "lincRNA"; transcript_name "Gm29672-202"; exon_number 1; exon_id "ENSMUSE00001331149.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045450.1"; havana_transcript "OTTMUST00000119233.1";
mm10-chrY	HAVANA	exon	59489927	59490105	.	+	.	gene_id "ENSMUSG00000101531.6"; transcript_id "ENSMUST00000191119.6"; gene_type "lincRNA"; gene_name "Gm29672"; transcript_type "lincRNA"; transcript_name "Gm29672-202"; exon_number 2; exon_id "ENSMUSE00001334698.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045450.1"; havana_transcript "OTTMUST00000119233.1";
mm10-chrY	HAVANA	exon	59491544	59491609	.	+	.	gene_id "ENSMUSG00000101531.6"; transcript_id "ENSMUST00000191119.6"; gene_type "lincRNA"; gene_name "Gm29672"; transcript_type "lincRNA"; transcript_name "Gm29672-202"; exon_number 3; exon_id "ENSMUSE00001332971.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045450.1"; havana_transcript "OTTMUST00000119233.1";
mm10-chrY	HAVANA	transcript	59489253	59492035	.	+	.	gene_id "ENSMUSG00000101531.6"; transcript_id "ENSMUST00000187118.1"; gene_type "lincRNA"; gene_name "Gm29672"; transcript_type "lincRNA"; transcript_name "Gm29672-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045450.1"; havana_transcript "OTTMUST00000119234.1";
mm10-chrY	HAVANA	exon	59489253	59489438	.	+	.	gene_id "ENSMUSG00000101531.6"; transcript_id "ENSMUST00000187118.1"; gene_type "lincRNA"; gene_name "Gm29672"; transcript_type "lincRNA"; transcript_name "Gm29672-201"; exon_number 1; exon_id "ENSMUSE00001331149.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045450.1"; havana_transcript "OTTMUST00000119234.1";
mm10-chrY	HAVANA	exon	59489927	59490105	.	+	.	gene_id "ENSMUSG00000101531.6"; transcript_id "ENSMUST00000187118.1"; gene_type "lincRNA"; gene_name "Gm29672"; transcript_type "lincRNA"; transcript_name "Gm29672-201"; exon_number 2; exon_id "ENSMUSE00001334698.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045450.1"; havana_transcript "OTTMUST00000119234.1";
mm10-chrY	HAVANA	exon	59490836	59491016	.	+	.	gene_id "ENSMUSG00000101531.6"; transcript_id "ENSMUST00000187118.1"; gene_type "lincRNA"; gene_name "Gm29672"; transcript_type "lincRNA"; transcript_name "Gm29672-201"; exon_number 3; exon_id "ENSMUSE00001323826.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045450.1"; havana_transcript "OTTMUST00000119234.1";
mm10-chrY	HAVANA	exon	59491544	59492035	.	+	.	gene_id "ENSMUSG00000101531.6"; transcript_id "ENSMUST00000187118.1"; gene_type "lincRNA"; gene_name "Gm29672"; transcript_type "lincRNA"; transcript_name "Gm29672-201"; exon_number 4; exon_id "ENSMUSE00001331390.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045450.1"; havana_transcript "OTTMUST00000119234.1";
mm10-chrY	HAVANA	gene	59517690	59520925	.	+	.	gene_id "ENSMUSG00000100425.1"; gene_type "lincRNA"; gene_name "Gm29131"; level 2; havana_gene "OTTMUSG00000045451.1";
mm10-chrY	HAVANA	transcript	59517690	59520925	.	+	.	gene_id "ENSMUSG00000100425.1"; transcript_id "ENSMUST00000189485.1"; gene_type "lincRNA"; gene_name "Gm29131"; transcript_type "lincRNA"; transcript_name "Gm29131-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045451.1"; havana_transcript "OTTMUST00000119235.1";
mm10-chrY	HAVANA	exon	59517690	59518327	.	+	.	gene_id "ENSMUSG00000100425.1"; transcript_id "ENSMUST00000189485.1"; gene_type "lincRNA"; gene_name "Gm29131"; transcript_type "lincRNA"; transcript_name "Gm29131-202"; exon_number 1; exon_id "ENSMUSE00001331284.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045451.1"; havana_transcript "OTTMUST00000119235.1";
mm10-chrY	HAVANA	exon	59518811	59518996	.	+	.	gene_id "ENSMUSG00000100425.1"; transcript_id "ENSMUST00000189485.1"; gene_type "lincRNA"; gene_name "Gm29131"; transcript_type "lincRNA"; transcript_name "Gm29131-202"; exon_number 2; exon_id "ENSMUSE00001325194.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045451.1"; havana_transcript "OTTMUST00000119235.1";
mm10-chrY	HAVANA	exon	59519724	59519907	.	+	.	gene_id "ENSMUSG00000100425.1"; transcript_id "ENSMUST00000189485.1"; gene_type "lincRNA"; gene_name "Gm29131"; transcript_type "lincRNA"; transcript_name "Gm29131-202"; exon_number 3; exon_id "ENSMUSE00001326644.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045451.1"; havana_transcript "OTTMUST00000119235.1";
mm10-chrY	HAVANA	exon	59520436	59520925	.	+	.	gene_id "ENSMUSG00000100425.1"; transcript_id "ENSMUST00000189485.1"; gene_type "lincRNA"; gene_name "Gm29131"; transcript_type "lincRNA"; transcript_name "Gm29131-202"; exon_number 4; exon_id "ENSMUSE00001331821.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045451.1"; havana_transcript "OTTMUST00000119235.1";
mm10-chrY	HAVANA	transcript	59518142	59520504	.	+	.	gene_id "ENSMUSG00000100425.1"; transcript_id "ENSMUST00000187715.1"; gene_type "lincRNA"; gene_name "Gm29131"; transcript_type "lincRNA"; transcript_name "Gm29131-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045451.1"; havana_transcript "OTTMUST00000119236.1";
mm10-chrY	HAVANA	exon	59518142	59518327	.	+	.	gene_id "ENSMUSG00000100425.1"; transcript_id "ENSMUST00000187715.1"; gene_type "lincRNA"; gene_name "Gm29131"; transcript_type "lincRNA"; transcript_name "Gm29131-201"; exon_number 1; exon_id "ENSMUSE00001332803.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045451.1"; havana_transcript "OTTMUST00000119236.1";
mm10-chrY	HAVANA	exon	59518815	59518996	.	+	.	gene_id "ENSMUSG00000100425.1"; transcript_id "ENSMUST00000187715.1"; gene_type "lincRNA"; gene_name "Gm29131"; transcript_type "lincRNA"; transcript_name "Gm29131-201"; exon_number 2; exon_id "ENSMUSE00001324721.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045451.1"; havana_transcript "OTTMUST00000119236.1";
mm10-chrY	HAVANA	exon	59520436	59520504	.	+	.	gene_id "ENSMUSG00000100425.1"; transcript_id "ENSMUST00000187715.1"; gene_type "lincRNA"; gene_name "Gm29131"; transcript_type "lincRNA"; transcript_name "Gm29131-201"; exon_number 3; exon_id "ENSMUSE00001330954.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045451.1"; havana_transcript "OTTMUST00000119236.1";
mm10-chrY	HAVANA	gene	59606702	59632768	.	-	.	gene_id "ENSMUSG00000101005.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; level 2; havana_gene "OTTMUSG00000045452.2";
mm10-chrY	HAVANA	transcript	59606702	59632768	.	-	.	gene_id "ENSMUSG00000101005.1"; transcript_id "ENSMUST00000191322.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20871-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045452.2"; havana_transcript "OTTMUST00000122496.1";
mm10-chrY	HAVANA	exon	59632725	59632768	.	-	.	gene_id "ENSMUSG00000101005.1"; transcript_id "ENSMUST00000191322.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20871-201"; exon_number 1; exon_id "ENSMUSE00001334865.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045452.2"; havana_transcript "OTTMUST00000122496.1";
mm10-chrY	HAVANA	exon	59631214	59631345	.	-	.	gene_id "ENSMUSG00000101005.1"; transcript_id "ENSMUST00000191322.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20871-201"; exon_number 2; exon_id "ENSMUSE00001319956.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045452.2"; havana_transcript "OTTMUST00000122496.1";
mm10-chrY	HAVANA	exon	59625839	59625905	.	-	.	gene_id "ENSMUSG00000101005.1"; transcript_id "ENSMUST00000191322.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20871-201"; exon_number 3; exon_id "ENSMUSE00001322485.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045452.2"; havana_transcript "OTTMUST00000122496.1";
mm10-chrY	HAVANA	exon	59625215	59625249	.	-	.	gene_id "ENSMUSG00000101005.1"; transcript_id "ENSMUST00000191322.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20871-201"; exon_number 4; exon_id "ENSMUSE00001326330.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045452.2"; havana_transcript "OTTMUST00000122496.1";
mm10-chrY	HAVANA	exon	59618114	59618180	.	-	.	gene_id "ENSMUSG00000101005.1"; transcript_id "ENSMUST00000191322.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20871-201"; exon_number 5; exon_id "ENSMUSE00001330012.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045452.2"; havana_transcript "OTTMUST00000122496.1";
mm10-chrY	HAVANA	exon	59617518	59617552	.	-	.	gene_id "ENSMUSG00000101005.1"; transcript_id "ENSMUST00000191322.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20871-201"; exon_number 6; exon_id "ENSMUSE00001321280.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045452.2"; havana_transcript "OTTMUST00000122496.1";
mm10-chrY	HAVANA	exon	59610264	59610380	.	-	.	gene_id "ENSMUSG00000101005.1"; transcript_id "ENSMUST00000191322.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20871-201"; exon_number 7; exon_id "ENSMUSE00001318144.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045452.2"; havana_transcript "OTTMUST00000122496.1";
mm10-chrY	HAVANA	exon	59609418	59609517	.	-	.	gene_id "ENSMUSG00000101005.1"; transcript_id "ENSMUST00000191322.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20871-201"; exon_number 8; exon_id "ENSMUSE00001324284.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045452.2"; havana_transcript "OTTMUST00000122496.1";
mm10-chrY	HAVANA	exon	59607298	59607394	.	-	.	gene_id "ENSMUSG00000101005.1"; transcript_id "ENSMUST00000191322.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20871-201"; exon_number 9; exon_id "ENSMUSE00001321799.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045452.2"; havana_transcript "OTTMUST00000122496.1";
mm10-chrY	HAVANA	exon	59606702	59606938	.	-	.	gene_id "ENSMUSG00000101005.1"; transcript_id "ENSMUST00000191322.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20871"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20871-201"; exon_number 10; exon_id "ENSMUSE00001333035.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045452.2"; havana_transcript "OTTMUST00000122496.1";
mm10-chrY	HAVANA	gene	59709922	59712281	.	-	.	gene_id "ENSMUSG00000101300.6"; gene_type "lincRNA"; gene_name "Gm29130"; level 2; havana_gene "OTTMUSG00000045453.1";
mm10-chrY	HAVANA	transcript	59709922	59712281	.	-	.	gene_id "ENSMUSG00000101300.6"; transcript_id "ENSMUST00000191015.6"; gene_type "lincRNA"; gene_name "Gm29130"; transcript_type "lincRNA"; transcript_name "Gm29130-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045453.1"; havana_transcript "OTTMUST00000119238.1";
mm10-chrY	HAVANA	exon	59712096	59712281	.	-	.	gene_id "ENSMUSG00000101300.6"; transcript_id "ENSMUST00000191015.6"; gene_type "lincRNA"; gene_name "Gm29130"; transcript_type "lincRNA"; transcript_name "Gm29130-201"; exon_number 1; exon_id "ENSMUSE00001326324.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045453.1"; havana_transcript "OTTMUST00000119238.1";
mm10-chrY	HAVANA	exon	59711431	59711608	.	-	.	gene_id "ENSMUSG00000101300.6"; transcript_id "ENSMUST00000191015.6"; gene_type "lincRNA"; gene_name "Gm29130"; transcript_type "lincRNA"; transcript_name "Gm29130-201"; exon_number 2; exon_id "ENSMUSE00001323753.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045453.1"; havana_transcript "OTTMUST00000119238.1";
mm10-chrY	HAVANA	exon	59710519	59710703	.	-	.	gene_id "ENSMUSG00000101300.6"; transcript_id "ENSMUST00000191015.6"; gene_type "lincRNA"; gene_name "Gm29130"; transcript_type "lincRNA"; transcript_name "Gm29130-201"; exon_number 3; exon_id "ENSMUSE00001329991.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045453.1"; havana_transcript "OTTMUST00000119238.1";
mm10-chrY	HAVANA	exon	59709922	59709990	.	-	.	gene_id "ENSMUSG00000101300.6"; transcript_id "ENSMUST00000191015.6"; gene_type "lincRNA"; gene_name "Gm29130"; transcript_type "lincRNA"; transcript_name "Gm29130-201"; exon_number 4; exon_id "ENSMUSE00001333693.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045453.1"; havana_transcript "OTTMUST00000119238.1";
mm10-chrY	HAVANA	transcript	59709922	59712281	.	-	.	gene_id "ENSMUSG00000101300.6"; transcript_id "ENSMUST00000191495.1"; gene_type "lincRNA"; gene_name "Gm29130"; transcript_type "lincRNA"; transcript_name "Gm29130-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045453.1"; havana_transcript "OTTMUST00000119239.1";
mm10-chrY	HAVANA	exon	59712096	59712281	.	-	.	gene_id "ENSMUSG00000101300.6"; transcript_id "ENSMUST00000191495.1"; gene_type "lincRNA"; gene_name "Gm29130"; transcript_type "lincRNA"; transcript_name "Gm29130-202"; exon_number 1; exon_id "ENSMUSE00001326324.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045453.1"; havana_transcript "OTTMUST00000119239.1";
mm10-chrY	HAVANA	exon	59711431	59711608	.	-	.	gene_id "ENSMUSG00000101300.6"; transcript_id "ENSMUST00000191495.1"; gene_type "lincRNA"; gene_name "Gm29130"; transcript_type "lincRNA"; transcript_name "Gm29130-202"; exon_number 2; exon_id "ENSMUSE00001323753.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045453.1"; havana_transcript "OTTMUST00000119239.1";
mm10-chrY	HAVANA	exon	59709922	59709990	.	-	.	gene_id "ENSMUSG00000101300.6"; transcript_id "ENSMUST00000191495.1"; gene_type "lincRNA"; gene_name "Gm29130"; transcript_type "lincRNA"; transcript_name "Gm29130-202"; exon_number 3; exon_id "ENSMUSE00001333693.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045453.1"; havana_transcript "OTTMUST00000119239.1";
mm10-chrY	HAVANA	gene	59734683	59735210	.	-	.	gene_id "ENSMUSG00000101426.1"; gene_type "lincRNA"; gene_name "Gm20978"; level 2; havana_gene "OTTMUSG00000045454.1";
mm10-chrY	HAVANA	transcript	59734683	59735210	.	-	.	gene_id "ENSMUSG00000101426.1"; transcript_id "ENSMUST00000190688.1"; gene_type "lincRNA"; gene_name "Gm20978"; transcript_type "lincRNA"; transcript_name "Gm20978-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045454.1"; havana_transcript "OTTMUST00000119240.1";
mm10-chrY	HAVANA	exon	59735106	59735210	.	-	.	gene_id "ENSMUSG00000101426.1"; transcript_id "ENSMUST00000190688.1"; gene_type "lincRNA"; gene_name "Gm20978"; transcript_type "lincRNA"; transcript_name "Gm20978-201"; exon_number 1; exon_id "ENSMUSE00001333692.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045454.1"; havana_transcript "OTTMUST00000119240.1";
mm10-chrY	HAVANA	exon	59734683	59734751	.	-	.	gene_id "ENSMUSG00000101426.1"; transcript_id "ENSMUST00000190688.1"; gene_type "lincRNA"; gene_name "Gm20978"; transcript_type "lincRNA"; transcript_name "Gm20978-201"; exon_number 2; exon_id "ENSMUSE00001328797.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045454.1"; havana_transcript "OTTMUST00000119240.1";
mm10-chrY	HAVANA	gene	59771637	59774001	.	-	.	gene_id "ENSMUSG00000101891.6"; gene_type "lincRNA"; gene_name "Gm29132"; level 2; havana_gene "OTTMUSG00000045455.1";
mm10-chrY	HAVANA	transcript	59771637	59774001	.	-	.	gene_id "ENSMUSG00000101891.6"; transcript_id "ENSMUST00000191588.6"; gene_type "lincRNA"; gene_name "Gm29132"; transcript_type "lincRNA"; transcript_name "Gm29132-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045455.1"; havana_transcript "OTTMUST00000119241.1";
mm10-chrY	HAVANA	exon	59773816	59774001	.	-	.	gene_id "ENSMUSG00000101891.6"; transcript_id "ENSMUST00000191588.6"; gene_type "lincRNA"; gene_name "Gm29132"; transcript_type "lincRNA"; transcript_name "Gm29132-202"; exon_number 1; exon_id "ENSMUSE00001322556.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045455.1"; havana_transcript "OTTMUST00000119241.1";
mm10-chrY	HAVANA	exon	59773147	59773328	.	-	.	gene_id "ENSMUSG00000101891.6"; transcript_id "ENSMUST00000191588.6"; gene_type "lincRNA"; gene_name "Gm29132"; transcript_type "lincRNA"; transcript_name "Gm29132-202"; exon_number 2; exon_id "ENSMUSE00001318738.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045455.1"; havana_transcript "OTTMUST00000119241.1";
mm10-chrY	HAVANA	exon	59772234	59772418	.	-	.	gene_id "ENSMUSG00000101891.6"; transcript_id "ENSMUST00000191588.6"; gene_type "lincRNA"; gene_name "Gm29132"; transcript_type "lincRNA"; transcript_name "Gm29132-202"; exon_number 3; exon_id "ENSMUSE00001318101.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045455.1"; havana_transcript "OTTMUST00000119241.1";
mm10-chrY	HAVANA	exon	59771637	59771705	.	-	.	gene_id "ENSMUSG00000101891.6"; transcript_id "ENSMUST00000191588.6"; gene_type "lincRNA"; gene_name "Gm29132"; transcript_type "lincRNA"; transcript_name "Gm29132-202"; exon_number 4; exon_id "ENSMUSE00001330815.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045455.1"; havana_transcript "OTTMUST00000119241.1";
mm10-chrY	HAVANA	transcript	59771637	59774001	.	-	.	gene_id "ENSMUSG00000101891.6"; transcript_id "ENSMUST00000186791.1"; gene_type "lincRNA"; gene_name "Gm29132"; transcript_type "lincRNA"; transcript_name "Gm29132-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045455.1"; havana_transcript "OTTMUST00000119242.1";
mm10-chrY	HAVANA	exon	59773816	59774001	.	-	.	gene_id "ENSMUSG00000101891.6"; transcript_id "ENSMUST00000186791.1"; gene_type "lincRNA"; gene_name "Gm29132"; transcript_type "lincRNA"; transcript_name "Gm29132-201"; exon_number 1; exon_id "ENSMUSE00001322556.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045455.1"; havana_transcript "OTTMUST00000119242.1";
mm10-chrY	HAVANA	exon	59773147	59773328	.	-	.	gene_id "ENSMUSG00000101891.6"; transcript_id "ENSMUST00000186791.1"; gene_type "lincRNA"; gene_name "Gm29132"; transcript_type "lincRNA"; transcript_name "Gm29132-201"; exon_number 2; exon_id "ENSMUSE00001318738.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045455.1"; havana_transcript "OTTMUST00000119242.1";
mm10-chrY	HAVANA	exon	59771637	59771705	.	-	.	gene_id "ENSMUSG00000101891.6"; transcript_id "ENSMUST00000186791.1"; gene_type "lincRNA"; gene_name "Gm29132"; transcript_type "lincRNA"; transcript_name "Gm29132-201"; exon_number 3; exon_id "ENSMUSE00001330815.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045455.1"; havana_transcript "OTTMUST00000119242.1";
mm10-chrY	HAVANA	gene	59796432	59796959	.	-	.	gene_id "ENSMUSG00000100238.1"; gene_type "lincRNA"; gene_name "Gm21450"; level 2; havana_gene "OTTMUSG00000045456.1";
mm10-chrY	HAVANA	transcript	59796432	59796959	.	-	.	gene_id "ENSMUSG00000100238.1"; transcript_id "ENSMUST00000187408.1"; gene_type "lincRNA"; gene_name "Gm21450"; transcript_type "lincRNA"; transcript_name "Gm21450-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045456.1"; havana_transcript "OTTMUST00000119243.1";
mm10-chrY	HAVANA	exon	59796855	59796959	.	-	.	gene_id "ENSMUSG00000100238.1"; transcript_id "ENSMUST00000187408.1"; gene_type "lincRNA"; gene_name "Gm21450"; transcript_type "lincRNA"; transcript_name "Gm21450-201"; exon_number 1; exon_id "ENSMUSE00001335303.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045456.1"; havana_transcript "OTTMUST00000119243.1";
mm10-chrY	HAVANA	exon	59796432	59796500	.	-	.	gene_id "ENSMUSG00000100238.1"; transcript_id "ENSMUST00000187408.1"; gene_type "lincRNA"; gene_name "Gm21450"; transcript_type "lincRNA"; transcript_name "Gm21450-201"; exon_number 2; exon_id "ENSMUSE00001320309.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045456.1"; havana_transcript "OTTMUST00000119243.1";
mm10-chrY	HAVANA	gene	59831762	59832455	.	+	.	gene_id "ENSMUSG00000101103.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21843"; level 2; havana_gene "OTTMUSG00000045457.1";
mm10-chrY	HAVANA	transcript	59831762	59832455	.	+	.	gene_id "ENSMUSG00000101103.1"; transcript_id "ENSMUST00000190137.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21843-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045457.1"; havana_transcript "OTTMUST00000119244.1";
mm10-chrY	HAVANA	exon	59831762	59832455	.	+	.	gene_id "ENSMUSG00000101103.1"; transcript_id "ENSMUST00000190137.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21843-201"; exon_number 1; exon_id "ENSMUSE00001318971.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045457.1"; havana_transcript "OTTMUST00000119244.1";
mm10-chrY	HAVANA	gene	60115080	60117779	.	+	.	gene_id "ENSMUSG00000099866.6"; gene_type "lincRNA"; gene_name "Gm28889"; level 2; havana_gene "OTTMUSG00000045481.1";
mm10-chrY	HAVANA	transcript	60115080	60117357	.	+	.	gene_id "ENSMUSG00000099866.6"; transcript_id "ENSMUST00000186829.6"; gene_type "lincRNA"; gene_name "Gm28889"; transcript_type "lincRNA"; transcript_name "Gm28889-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045481.1"; havana_transcript "OTTMUST00000119285.1";
mm10-chrY	HAVANA	exon	60115080	60115180	.	+	.	gene_id "ENSMUSG00000099866.6"; transcript_id "ENSMUST00000186829.6"; gene_type "lincRNA"; gene_name "Gm28889"; transcript_type "lincRNA"; transcript_name "Gm28889-202"; exon_number 1; exon_id "ENSMUSE00001321147.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045481.1"; havana_transcript "OTTMUST00000119285.1";
mm10-chrY	HAVANA	exon	60115668	60115849	.	+	.	gene_id "ENSMUSG00000099866.6"; transcript_id "ENSMUST00000186829.6"; gene_type "lincRNA"; gene_name "Gm28889"; transcript_type "lincRNA"; transcript_name "Gm28889-202"; exon_number 2; exon_id "ENSMUSE00001320240.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045481.1"; havana_transcript "OTTMUST00000119285.1";
mm10-chrY	HAVANA	exon	60117289	60117357	.	+	.	gene_id "ENSMUSG00000099866.6"; transcript_id "ENSMUST00000186829.6"; gene_type "lincRNA"; gene_name "Gm28889"; transcript_type "lincRNA"; transcript_name "Gm28889-202"; exon_number 3; exon_id "ENSMUSE00001327154.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045481.1"; havana_transcript "OTTMUST00000119285.1";
mm10-chrY	HAVANA	transcript	60115080	60117779	.	+	.	gene_id "ENSMUSG00000099866.6"; transcript_id "ENSMUST00000185350.1"; gene_type "lincRNA"; gene_name "Gm28889"; transcript_type "lincRNA"; transcript_name "Gm28889-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045481.1"; havana_transcript "OTTMUST00000119286.1";
mm10-chrY	HAVANA	exon	60115080	60115180	.	+	.	gene_id "ENSMUSG00000099866.6"; transcript_id "ENSMUST00000185350.1"; gene_type "lincRNA"; gene_name "Gm28889"; transcript_type "lincRNA"; transcript_name "Gm28889-201"; exon_number 1; exon_id "ENSMUSE00001321147.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045481.1"; havana_transcript "OTTMUST00000119286.1";
mm10-chrY	HAVANA	exon	60115668	60115849	.	+	.	gene_id "ENSMUSG00000099866.6"; transcript_id "ENSMUST00000185350.1"; gene_type "lincRNA"; gene_name "Gm28889"; transcript_type "lincRNA"; transcript_name "Gm28889-201"; exon_number 2; exon_id "ENSMUSE00001320240.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045481.1"; havana_transcript "OTTMUST00000119286.1";
mm10-chrY	HAVANA	exon	60116577	60116761	.	+	.	gene_id "ENSMUSG00000099866.6"; transcript_id "ENSMUST00000185350.1"; gene_type "lincRNA"; gene_name "Gm28889"; transcript_type "lincRNA"; transcript_name "Gm28889-201"; exon_number 3; exon_id "ENSMUSE00001331176.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045481.1"; havana_transcript "OTTMUST00000119286.1";
mm10-chrY	HAVANA	exon	60117289	60117779	.	+	.	gene_id "ENSMUSG00000099866.6"; transcript_id "ENSMUST00000185350.1"; gene_type "lincRNA"; gene_name "Gm28889"; transcript_type "lincRNA"; transcript_name "Gm28889-201"; exon_number 4; exon_id "ENSMUSE00001331557.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045481.1"; havana_transcript "OTTMUST00000119286.1";
mm10-chrY	HAVANA	gene	60149350	60149876	.	+	.	gene_id "ENSMUSG00000101110.1"; gene_type "lincRNA"; gene_name "Gm28890"; level 2; havana_gene "OTTMUSG00000045482.1";
mm10-chrY	HAVANA	transcript	60149350	60149876	.	+	.	gene_id "ENSMUSG00000101110.1"; transcript_id "ENSMUST00000186686.1"; gene_type "lincRNA"; gene_name "Gm28890"; transcript_type "lincRNA"; transcript_name "Gm28890-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045482.1"; havana_transcript "OTTMUST00000119287.1";
mm10-chrY	HAVANA	exon	60149350	60149454	.	+	.	gene_id "ENSMUSG00000101110.1"; transcript_id "ENSMUST00000186686.1"; gene_type "lincRNA"; gene_name "Gm28890"; transcript_type "lincRNA"; transcript_name "Gm28890-201"; exon_number 1; exon_id "ENSMUSE00001328536.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045482.1"; havana_transcript "OTTMUST00000119287.1";
mm10-chrY	HAVANA	exon	60149809	60149876	.	+	.	gene_id "ENSMUSG00000101110.1"; transcript_id "ENSMUST00000186686.1"; gene_type "lincRNA"; gene_name "Gm28890"; transcript_type "lincRNA"; transcript_name "Gm28890-201"; exon_number 2; exon_id "ENSMUSE00001332750.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045482.1"; havana_transcript "OTTMUST00000119287.1";
mm10-chrY	HAVANA	gene	60241202	60273250	.	+	.	gene_id "ENSMUSG00000095141.7"; gene_type "protein_coding"; gene_name "Gm28891"; level 2; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	HAVANA	transcript	60241202	60273250	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	exon	60241202	60241245	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 1; exon_id "ENSMUSE00001334215.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	exon	60242612	60242743	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 2; exon_id "ENSMUSE00001334328.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	CDS	60242626	60242743	.	+	0	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 2; exon_id "ENSMUSE00001334328.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	start_codon	60242626	60242628	.	+	0	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 2; exon_id "ENSMUSE00001334328.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	exon	60254092	60254158	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 3; exon_id "ENSMUSE00001081103.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	CDS	60254092	60254158	.	+	2	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 3; exon_id "ENSMUSE00001081103.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	exon	60254713	60254747	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 4; exon_id "ENSMUSE00000985122.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	CDS	60254713	60254747	.	+	1	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 4; exon_id "ENSMUSE00000985122.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	exon	60261795	60261861	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 5; exon_id "ENSMUSE00001014254.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	CDS	60261795	60261861	.	+	2	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 5; exon_id "ENSMUSE00001014254.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	exon	60262423	60262457	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 6; exon_id "ENSMUSE00001068253.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	CDS	60262423	60262457	.	+	1	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 6; exon_id "ENSMUSE00001068253.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	exon	60269583	60269700	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 7; exon_id "ENSMUSE00000971406.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	CDS	60269583	60269700	.	+	2	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 7; exon_id "ENSMUSE00000971406.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	exon	60270451	60270550	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 8; exon_id "ENSMUSE00001334221.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	CDS	60270451	60270550	.	+	1	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 8; exon_id "ENSMUSE00001334221.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	exon	60272564	60272662	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 9; exon_id "ENSMUSE00001335123.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	CDS	60272564	60272662	.	+	0	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 9; exon_id "ENSMUSE00001335123.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	exon	60273021	60273250	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 10; exon_id "ENSMUSE00001321387.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	CDS	60273021	60273047	.	+	0	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 10; exon_id "ENSMUSE00001321387.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	stop_codon	60273048	60273050	.	+	0	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 10; exon_id "ENSMUSE00001321387.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	UTR	60241202	60241245	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 1; exon_id "ENSMUSE00001334215.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	UTR	60242612	60242625	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 2; exon_id "ENSMUSE00001334328.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	HAVANA	UTR	60273048	60273250	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000189333.6"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-202"; exon_number 10; exon_id "ENSMUSE00001321387.1"; level 2; protein_id "ENSMUSP00000140248.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045483.2"; havana_transcript "OTTMUST00000119288.2";
mm10-chrY	ENSEMBL	transcript	60242635	60270517	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	exon	60242635	60242743	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 1; exon_id "ENSMUSE00001026100.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	CDS	60242635	60242743	.	+	0	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 1; exon_id "ENSMUSE00001026100.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	start_codon	60242635	60242637	.	+	0	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 1; exon_id "ENSMUSE00001026100.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	exon	60254092	60254158	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 2; exon_id "ENSMUSE00001081103.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	CDS	60254092	60254158	.	+	2	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 2; exon_id "ENSMUSE00001081103.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	exon	60254713	60254747	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 3; exon_id "ENSMUSE00000985122.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	CDS	60254713	60254747	.	+	1	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 3; exon_id "ENSMUSE00000985122.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	exon	60261795	60261861	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 4; exon_id "ENSMUSE00001014254.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	CDS	60261795	60261861	.	+	2	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 4; exon_id "ENSMUSE00001014254.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	exon	60262423	60262457	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 5; exon_id "ENSMUSE00001068253.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	CDS	60262423	60262457	.	+	1	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 5; exon_id "ENSMUSE00001068253.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	exon	60269583	60269700	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 6; exon_id "ENSMUSE00000971406.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	CDS	60269583	60269700	.	+	2	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 6; exon_id "ENSMUSE00000971406.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	exon	60270451	60270517	.	+	.	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 7; exon_id "ENSMUSE00001089431.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	ENSEMBL	CDS	60270451	60270517	.	+	1	gene_id "ENSMUSG00000095141.7"; transcript_id "ENSMUST00000178751.1"; gene_type "protein_coding"; gene_name "Gm28891"; transcript_type "protein_coding"; transcript_name "Gm28891-201"; exon_number 7; exon_id "ENSMUSE00001089431.1"; level 3; protein_id "ENSMUSP00000136562.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045483.2";
mm10-chrY	HAVANA	gene	60335115	60338347	.	+	.	gene_id "ENSMUSG00000101910.1"; gene_type "lincRNA"; gene_name "Gm28691"; level 2; havana_gene "OTTMUSG00000045475.1";
mm10-chrY	HAVANA	transcript	60335115	60338347	.	+	.	gene_id "ENSMUSG00000101910.1"; transcript_id "ENSMUST00000191561.1"; gene_type "lincRNA"; gene_name "Gm28691"; transcript_type "lincRNA"; transcript_name "Gm28691-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045475.1"; havana_transcript "OTTMUST00000119274.1";
mm10-chrY	HAVANA	exon	60335115	60335753	.	+	.	gene_id "ENSMUSG00000101910.1"; transcript_id "ENSMUST00000191561.1"; gene_type "lincRNA"; gene_name "Gm28691"; transcript_type "lincRNA"; transcript_name "Gm28691-202"; exon_number 1; exon_id "ENSMUSE00001318460.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045475.1"; havana_transcript "OTTMUST00000119274.1";
mm10-chrY	HAVANA	exon	60336238	60336420	.	+	.	gene_id "ENSMUSG00000101910.1"; transcript_id "ENSMUST00000191561.1"; gene_type "lincRNA"; gene_name "Gm28691"; transcript_type "lincRNA"; transcript_name "Gm28691-202"; exon_number 2; exon_id "ENSMUSE00001328171.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045475.1"; havana_transcript "OTTMUST00000119274.1";
mm10-chrY	HAVANA	exon	60337150	60337330	.	+	.	gene_id "ENSMUSG00000101910.1"; transcript_id "ENSMUST00000191561.1"; gene_type "lincRNA"; gene_name "Gm28691"; transcript_type "lincRNA"; transcript_name "Gm28691-202"; exon_number 3; exon_id "ENSMUSE00001331894.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045475.1"; havana_transcript "OTTMUST00000119274.1";
mm10-chrY	HAVANA	exon	60337858	60338347	.	+	.	gene_id "ENSMUSG00000101910.1"; transcript_id "ENSMUST00000191561.1"; gene_type "lincRNA"; gene_name "Gm28691"; transcript_type "lincRNA"; transcript_name "Gm28691-202"; exon_number 4; exon_id "ENSMUSE00001318273.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045475.1"; havana_transcript "OTTMUST00000119274.1";
mm10-chrY	HAVANA	transcript	60335568	60337923	.	+	.	gene_id "ENSMUSG00000101910.1"; transcript_id "ENSMUST00000189401.1"; gene_type "lincRNA"; gene_name "Gm28691"; transcript_type "lincRNA"; transcript_name "Gm28691-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045475.1"; havana_transcript "OTTMUST00000119275.1";
mm10-chrY	HAVANA	exon	60335568	60335753	.	+	.	gene_id "ENSMUSG00000101910.1"; transcript_id "ENSMUST00000189401.1"; gene_type "lincRNA"; gene_name "Gm28691"; transcript_type "lincRNA"; transcript_name "Gm28691-201"; exon_number 1; exon_id "ENSMUSE00001324951.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045475.1"; havana_transcript "OTTMUST00000119275.1";
mm10-chrY	HAVANA	exon	60336242	60336420	.	+	.	gene_id "ENSMUSG00000101910.1"; transcript_id "ENSMUST00000189401.1"; gene_type "lincRNA"; gene_name "Gm28691"; transcript_type "lincRNA"; transcript_name "Gm28691-201"; exon_number 2; exon_id "ENSMUSE00001335520.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045475.1"; havana_transcript "OTTMUST00000119275.1";
mm10-chrY	HAVANA	exon	60337858	60337923	.	+	.	gene_id "ENSMUSG00000101910.1"; transcript_id "ENSMUST00000189401.1"; gene_type "lincRNA"; gene_name "Gm28691"; transcript_type "lincRNA"; transcript_name "Gm28691-201"; exon_number 3; exon_id "ENSMUSE00001325861.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045475.1"; havana_transcript "OTTMUST00000119275.1";
mm10-chrY	HAVANA	gene	60364506	60366868	.	+	.	gene_id "ENSMUSG00000100579.6"; gene_type "lincRNA"; gene_name "Gm28692"; level 2; havana_gene "OTTMUSG00000045476.1";
mm10-chrY	HAVANA	transcript	60364506	60366868	.	+	.	gene_id "ENSMUSG00000100579.6"; transcript_id "ENSMUST00000189645.6"; gene_type "lincRNA"; gene_name "Gm28692"; transcript_type "lincRNA"; transcript_name "Gm28692-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045476.1"; havana_transcript "OTTMUST00000119276.1";
mm10-chrY	HAVANA	exon	60364506	60364691	.	+	.	gene_id "ENSMUSG00000100579.6"; transcript_id "ENSMUST00000189645.6"; gene_type "lincRNA"; gene_name "Gm28692"; transcript_type "lincRNA"; transcript_name "Gm28692-202"; exon_number 1; exon_id "ENSMUSE00001331492.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045476.1"; havana_transcript "OTTMUST00000119276.1";
mm10-chrY	HAVANA	exon	60365179	60365360	.	+	.	gene_id "ENSMUSG00000100579.6"; transcript_id "ENSMUST00000189645.6"; gene_type "lincRNA"; gene_name "Gm28692"; transcript_type "lincRNA"; transcript_name "Gm28692-202"; exon_number 2; exon_id "ENSMUSE00001334017.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045476.1"; havana_transcript "OTTMUST00000119276.1";
mm10-chrY	HAVANA	exon	60366088	60366271	.	+	.	gene_id "ENSMUSG00000100579.6"; transcript_id "ENSMUST00000189645.6"; gene_type "lincRNA"; gene_name "Gm28692"; transcript_type "lincRNA"; transcript_name "Gm28692-202"; exon_number 3; exon_id "ENSMUSE00001323847.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045476.1"; havana_transcript "OTTMUST00000119276.1";
mm10-chrY	HAVANA	exon	60366800	60366868	.	+	.	gene_id "ENSMUSG00000100579.6"; transcript_id "ENSMUST00000189645.6"; gene_type "lincRNA"; gene_name "Gm28692"; transcript_type "lincRNA"; transcript_name "Gm28692-202"; exon_number 4; exon_id "ENSMUSE00001326862.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045476.1"; havana_transcript "OTTMUST00000119276.1";
mm10-chrY	HAVANA	transcript	60364506	60366868	.	+	.	gene_id "ENSMUSG00000100579.6"; transcript_id "ENSMUST00000186318.1"; gene_type "lincRNA"; gene_name "Gm28692"; transcript_type "lincRNA"; transcript_name "Gm28692-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045476.1"; havana_transcript "OTTMUST00000119277.1";
mm10-chrY	HAVANA	exon	60364506	60364691	.	+	.	gene_id "ENSMUSG00000100579.6"; transcript_id "ENSMUST00000186318.1"; gene_type "lincRNA"; gene_name "Gm28692"; transcript_type "lincRNA"; transcript_name "Gm28692-201"; exon_number 1; exon_id "ENSMUSE00001331492.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045476.1"; havana_transcript "OTTMUST00000119277.1";
mm10-chrY	HAVANA	exon	60365179	60365360	.	+	.	gene_id "ENSMUSG00000100579.6"; transcript_id "ENSMUST00000186318.1"; gene_type "lincRNA"; gene_name "Gm28692"; transcript_type "lincRNA"; transcript_name "Gm28692-201"; exon_number 2; exon_id "ENSMUSE00001334017.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045476.1"; havana_transcript "OTTMUST00000119277.1";
mm10-chrY	HAVANA	exon	60366800	60366868	.	+	.	gene_id "ENSMUSG00000100579.6"; transcript_id "ENSMUST00000186318.1"; gene_type "lincRNA"; gene_name "Gm28692"; transcript_type "lincRNA"; transcript_name "Gm28692-201"; exon_number 3; exon_id "ENSMUSE00001326862.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045476.1"; havana_transcript "OTTMUST00000119277.1";
mm10-chrY	HAVANA	gene	60457472	60481481	.	-	.	gene_id "ENSMUSG00000094217.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20794"; level 2; havana_gene "OTTMUSG00000045477.1";
mm10-chrY	HAVANA	transcript	60457472	60481481	.	-	.	gene_id "ENSMUSG00000094217.2"; transcript_id "ENSMUST00000177626.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20794"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20794-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045477.1"; havana_transcript "OTTMUST00000119278.1";
mm10-chrY	HAVANA	exon	60481373	60481481	.	-	.	gene_id "ENSMUSG00000094217.2"; transcript_id "ENSMUST00000177626.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20794"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20794-201"; exon_number 1; exon_id "ENSMUSE00001011459.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045477.1"; havana_transcript "OTTMUST00000119278.1";
mm10-chrY	HAVANA	exon	60475998	60476064	.	-	.	gene_id "ENSMUSG00000094217.2"; transcript_id "ENSMUST00000177626.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20794"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20794-201"; exon_number 2; exon_id "ENSMUSE00000970010.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045477.1"; havana_transcript "OTTMUST00000119278.1";
mm10-chrY	HAVANA	exon	60475382	60475416	.	-	.	gene_id "ENSMUSG00000094217.2"; transcript_id "ENSMUST00000177626.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20794"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20794-201"; exon_number 3; exon_id "ENSMUSE00001042222.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045477.1"; havana_transcript "OTTMUST00000119278.1";
mm10-chrY	HAVANA	exon	60468302	60468368	.	-	.	gene_id "ENSMUSG00000094217.2"; transcript_id "ENSMUST00000177626.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20794"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20794-201"; exon_number 4; exon_id "ENSMUSE00000991539.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045477.1"; havana_transcript "OTTMUST00000119278.1";
mm10-chrY	HAVANA	exon	60467707	60467741	.	-	.	gene_id "ENSMUSG00000094217.2"; transcript_id "ENSMUST00000177626.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20794"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20794-201"; exon_number 5; exon_id "ENSMUSE00000980861.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045477.1"; havana_transcript "OTTMUST00000119278.1";
mm10-chrY	HAVANA	exon	60460436	60460553	.	-	.	gene_id "ENSMUSG00000094217.2"; transcript_id "ENSMUST00000177626.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20794"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20794-201"; exon_number 6; exon_id "ENSMUSE00000973324.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045477.1"; havana_transcript "OTTMUST00000119278.1";
mm10-chrY	HAVANA	exon	60459591	60459690	.	-	.	gene_id "ENSMUSG00000094217.2"; transcript_id "ENSMUST00000177626.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20794"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20794-201"; exon_number 7; exon_id "ENSMUSE00001028839.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045477.1"; havana_transcript "OTTMUST00000119278.1";
mm10-chrY	HAVANA	exon	60457472	60457568	.	-	.	gene_id "ENSMUSG00000094217.2"; transcript_id "ENSMUST00000177626.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20794"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20794-201"; exon_number 8; exon_id "ENSMUSE00001320451.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045477.1"; havana_transcript "OTTMUST00000119278.1";
mm10-chrY	HAVANA	gene	60558018	60560378	.	-	.	gene_id "ENSMUSG00000100057.6"; gene_type "lincRNA"; gene_name "Gm28690"; level 2; havana_gene "OTTMUSG00000045478.1";
mm10-chrY	HAVANA	transcript	60558018	60560378	.	-	.	gene_id "ENSMUSG00000100057.6"; transcript_id "ENSMUST00000190325.6"; gene_type "lincRNA"; gene_name "Gm28690"; transcript_type "lincRNA"; transcript_name "Gm28690-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045478.1"; havana_transcript "OTTMUST00000119279.1";
mm10-chrY	HAVANA	exon	60560193	60560378	.	-	.	gene_id "ENSMUSG00000100057.6"; transcript_id "ENSMUST00000190325.6"; gene_type "lincRNA"; gene_name "Gm28690"; transcript_type "lincRNA"; transcript_name "Gm28690-202"; exon_number 1; exon_id "ENSMUSE00001334513.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045478.1"; havana_transcript "OTTMUST00000119279.1";
mm10-chrY	HAVANA	exon	60559524	60559705	.	-	.	gene_id "ENSMUSG00000100057.6"; transcript_id "ENSMUST00000190325.6"; gene_type "lincRNA"; gene_name "Gm28690"; transcript_type "lincRNA"; transcript_name "Gm28690-202"; exon_number 2; exon_id "ENSMUSE00001320299.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045478.1"; havana_transcript "OTTMUST00000119279.1";
mm10-chrY	HAVANA	exon	60558612	60558796	.	-	.	gene_id "ENSMUSG00000100057.6"; transcript_id "ENSMUST00000190325.6"; gene_type "lincRNA"; gene_name "Gm28690"; transcript_type "lincRNA"; transcript_name "Gm28690-202"; exon_number 3; exon_id "ENSMUSE00001334462.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045478.1"; havana_transcript "OTTMUST00000119279.1";
mm10-chrY	HAVANA	exon	60558018	60558086	.	-	.	gene_id "ENSMUSG00000100057.6"; transcript_id "ENSMUST00000190325.6"; gene_type "lincRNA"; gene_name "Gm28690"; transcript_type "lincRNA"; transcript_name "Gm28690-202"; exon_number 4; exon_id "ENSMUSE00001322970.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045478.1"; havana_transcript "OTTMUST00000119279.1";
mm10-chrY	HAVANA	transcript	60558018	60560378	.	-	.	gene_id "ENSMUSG00000100057.6"; transcript_id "ENSMUST00000188076.1"; gene_type "lincRNA"; gene_name "Gm28690"; transcript_type "lincRNA"; transcript_name "Gm28690-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045478.1"; havana_transcript "OTTMUST00000119280.1";
mm10-chrY	HAVANA	exon	60560193	60560378	.	-	.	gene_id "ENSMUSG00000100057.6"; transcript_id "ENSMUST00000188076.1"; gene_type "lincRNA"; gene_name "Gm28690"; transcript_type "lincRNA"; transcript_name "Gm28690-201"; exon_number 1; exon_id "ENSMUSE00001334513.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045478.1"; havana_transcript "OTTMUST00000119280.1";
mm10-chrY	HAVANA	exon	60559524	60559705	.	-	.	gene_id "ENSMUSG00000100057.6"; transcript_id "ENSMUST00000188076.1"; gene_type "lincRNA"; gene_name "Gm28690"; transcript_type "lincRNA"; transcript_name "Gm28690-201"; exon_number 2; exon_id "ENSMUSE00001320299.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045478.1"; havana_transcript "OTTMUST00000119280.1";
mm10-chrY	HAVANA	exon	60558018	60558086	.	-	.	gene_id "ENSMUSG00000100057.6"; transcript_id "ENSMUST00000188076.1"; gene_type "lincRNA"; gene_name "Gm28690"; transcript_type "lincRNA"; transcript_name "Gm28690-201"; exon_number 3; exon_id "ENSMUSE00001322970.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045478.1"; havana_transcript "OTTMUST00000119280.1";
mm10-chrY	HAVANA	gene	60585092	60585619	.	-	.	gene_id "ENSMUSG00000101592.1"; gene_type "lincRNA"; gene_name "Gm28689"; level 2; havana_gene "OTTMUSG00000045479.1";
mm10-chrY	HAVANA	transcript	60585092	60585619	.	-	.	gene_id "ENSMUSG00000101592.1"; transcript_id "ENSMUST00000187441.1"; gene_type "lincRNA"; gene_name "Gm28689"; transcript_type "lincRNA"; transcript_name "Gm28689-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045479.1"; havana_transcript "OTTMUST00000119281.1";
mm10-chrY	HAVANA	exon	60585515	60585619	.	-	.	gene_id "ENSMUSG00000101592.1"; transcript_id "ENSMUST00000187441.1"; gene_type "lincRNA"; gene_name "Gm28689"; transcript_type "lincRNA"; transcript_name "Gm28689-201"; exon_number 1; exon_id "ENSMUSE00001323107.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045479.1"; havana_transcript "OTTMUST00000119281.1";
mm10-chrY	HAVANA	exon	60585092	60585160	.	-	.	gene_id "ENSMUSG00000101592.1"; transcript_id "ENSMUST00000187441.1"; gene_type "lincRNA"; gene_name "Gm28689"; transcript_type "lincRNA"; transcript_name "Gm28689-201"; exon_number 2; exon_id "ENSMUSE00001320812.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045479.1"; havana_transcript "OTTMUST00000119281.1";
mm10-chrY	HAVANA	gene	60622325	60625558	.	-	.	gene_id "ENSMUSG00000100609.6"; gene_type "lincRNA"; gene_name "Gm28687"; level 2; havana_gene "OTTMUSG00000045486.2";
mm10-chrY	HAVANA	transcript	60622325	60625558	.	-	.	gene_id "ENSMUSG00000100609.6"; transcript_id "ENSMUST00000187203.6"; gene_type "lincRNA"; gene_name "Gm28687"; transcript_type "lincRNA"; transcript_name "Gm28687-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045486.2"; havana_transcript "OTTMUST00000119297.2";
mm10-chrY	HAVANA	exon	60624920	60625558	.	-	.	gene_id "ENSMUSG00000100609.6"; transcript_id "ENSMUST00000187203.6"; gene_type "lincRNA"; gene_name "Gm28687"; transcript_type "lincRNA"; transcript_name "Gm28687-201"; exon_number 1; exon_id "ENSMUSE00001324542.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045486.2"; havana_transcript "OTTMUST00000119297.2";
mm10-chrY	HAVANA	exon	60624251	60624432	.	-	.	gene_id "ENSMUSG00000100609.6"; transcript_id "ENSMUST00000187203.6"; gene_type "lincRNA"; gene_name "Gm28687"; transcript_type "lincRNA"; transcript_name "Gm28687-201"; exon_number 2; exon_id "ENSMUSE00001333930.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045486.2"; havana_transcript "OTTMUST00000119297.2";
mm10-chrY	HAVANA	exon	60623338	60623522	.	-	.	gene_id "ENSMUSG00000100609.6"; transcript_id "ENSMUST00000187203.6"; gene_type "lincRNA"; gene_name "Gm28687"; transcript_type "lincRNA"; transcript_name "Gm28687-201"; exon_number 3; exon_id "ENSMUSE00001332092.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045486.2"; havana_transcript "OTTMUST00000119297.2";
mm10-chrY	HAVANA	exon	60622325	60622812	.	-	.	gene_id "ENSMUSG00000100609.6"; transcript_id "ENSMUST00000187203.6"; gene_type "lincRNA"; gene_name "Gm28687"; transcript_type "lincRNA"; transcript_name "Gm28687-201"; exon_number 4; exon_id "ENSMUSE00001318266.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045486.2"; havana_transcript "OTTMUST00000119297.2";
mm10-chrY	HAVANA	transcript	60622744	60625105	.	-	.	gene_id "ENSMUSG00000100609.6"; transcript_id "ENSMUST00000189587.1"; gene_type "lincRNA"; gene_name "Gm28687"; transcript_type "lincRNA"; transcript_name "Gm28687-202"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045486.2"; havana_transcript "OTTMUST00000119296.2";
mm10-chrY	HAVANA	exon	60624920	60625105	.	-	.	gene_id "ENSMUSG00000100609.6"; transcript_id "ENSMUST00000189587.1"; gene_type "lincRNA"; gene_name "Gm28687"; transcript_type "lincRNA"; transcript_name "Gm28687-202"; exon_number 1; exon_id "ENSMUSE00001324547.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045486.2"; havana_transcript "OTTMUST00000119296.2";
mm10-chrY	HAVANA	exon	60624251	60624432	.	-	.	gene_id "ENSMUSG00000100609.6"; transcript_id "ENSMUST00000189587.1"; gene_type "lincRNA"; gene_name "Gm28687"; transcript_type "lincRNA"; transcript_name "Gm28687-202"; exon_number 2; exon_id "ENSMUSE00001333930.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045486.2"; havana_transcript "OTTMUST00000119296.2";
mm10-chrY	HAVANA	exon	60622744	60622812	.	-	.	gene_id "ENSMUSG00000100609.6"; transcript_id "ENSMUST00000189587.1"; gene_type "lincRNA"; gene_name "Gm28687"; transcript_type "lincRNA"; transcript_name "Gm28687-202"; exon_number 3; exon_id "ENSMUSE00001330310.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045486.2"; havana_transcript "OTTMUST00000119296.2";
mm10-chrY	HAVANA	gene	60647205	60647732	.	-	.	gene_id "ENSMUSG00000101993.1"; gene_type "lincRNA"; gene_name "Gm20987"; level 2; havana_gene "OTTMUSG00000046584.1";
mm10-chrY	HAVANA	transcript	60647205	60647732	.	-	.	gene_id "ENSMUSG00000101993.1"; transcript_id "ENSMUST00000191165.1"; gene_type "lincRNA"; gene_name "Gm20987"; transcript_type "lincRNA"; transcript_name "Gm20987-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046584.1"; havana_transcript "OTTMUST00000121121.1";
mm10-chrY	HAVANA	exon	60647628	60647732	.	-	.	gene_id "ENSMUSG00000101993.1"; transcript_id "ENSMUST00000191165.1"; gene_type "lincRNA"; gene_name "Gm20987"; transcript_type "lincRNA"; transcript_name "Gm20987-201"; exon_number 1; exon_id "ENSMUSE00001332876.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046584.1"; havana_transcript "OTTMUST00000121121.1";
mm10-chrY	HAVANA	exon	60647205	60647273	.	-	.	gene_id "ENSMUSG00000101993.1"; transcript_id "ENSMUST00000191165.1"; gene_type "lincRNA"; gene_name "Gm20987"; transcript_type "lincRNA"; transcript_name "Gm20987-201"; exon_number 2; exon_id "ENSMUSE00001335148.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046584.1"; havana_transcript "OTTMUST00000121121.1";
mm10-chrY	HAVANA	gene	60682607	60683302	.	+	.	gene_id "ENSMUSG00000099935.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21918"; level 2; havana_gene "OTTMUSG00000045488.1";
mm10-chrY	HAVANA	transcript	60682607	60683302	.	+	.	gene_id "ENSMUSG00000099935.1"; transcript_id "ENSMUST00000190310.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21918"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21918-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045488.1"; havana_transcript "OTTMUST00000119299.1";
mm10-chrY	HAVANA	exon	60682607	60683302	.	+	.	gene_id "ENSMUSG00000099935.1"; transcript_id "ENSMUST00000190310.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21918"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21918-201"; exon_number 1; exon_id "ENSMUSE00001332365.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045488.1"; havana_transcript "OTTMUST00000119299.1";
mm10-chrY	HAVANA	gene	61102247	61134259	.	+	.	gene_id "ENSMUSG00000100667.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; level 2; havana_gene "OTTMUSG00000045489.2";
mm10-chrY	HAVANA	transcript	61102247	61134259	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	exon	61102247	61102290	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 1; exon_id "ENSMUSE00001331886.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	exon	61103655	61103786	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 2; exon_id "ENSMUSE00001334977.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	CDS	61103669	61103786	.	+	0	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 2; exon_id "ENSMUSE00001334977.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	start_codon	61103669	61103671	.	+	0	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 2; exon_id "ENSMUSE00001334977.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	exon	61115111	61115177	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 3; exon_id "ENSMUSE00001331249.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	CDS	61115111	61115177	.	+	2	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 3; exon_id "ENSMUSE00001331249.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	exon	61115728	61115762	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 4; exon_id "ENSMUSE00001319329.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	CDS	61115728	61115762	.	+	1	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 4; exon_id "ENSMUSE00001319329.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	exon	61122793	61122859	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 5; exon_id "ENSMUSE00001331489.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	CDS	61122793	61122859	.	+	2	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 5; exon_id "ENSMUSE00001331489.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	exon	61123419	61123453	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 6; exon_id "ENSMUSE00001319430.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	CDS	61123419	61123453	.	+	1	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 6; exon_id "ENSMUSE00001319430.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	exon	61130587	61130704	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 7; exon_id "ENSMUSE00001328601.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	CDS	61130587	61130704	.	+	2	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 7; exon_id "ENSMUSE00001328601.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	exon	61131455	61131554	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 8; exon_id "ENSMUSE00001321884.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	CDS	61131455	61131554	.	+	1	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 8; exon_id "ENSMUSE00001321884.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	exon	61133569	61133667	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 9; exon_id "ENSMUSE00001328109.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	CDS	61133569	61133667	.	+	0	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 9; exon_id "ENSMUSE00001328109.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	exon	61134026	61134259	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 10; exon_id "ENSMUSE00001326467.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	CDS	61134026	61134052	.	+	0	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 10; exon_id "ENSMUSE00001326467.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	stop_codon	61134053	61134055	.	+	0	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 10; exon_id "ENSMUSE00001326467.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	UTR	61102247	61102290	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 1; exon_id "ENSMUSE00001331886.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	UTR	61103655	61103668	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 2; exon_id "ENSMUSE00001334977.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	UTR	61134053	61134259	.	+	.	gene_id "ENSMUSG00000100667.1"; transcript_id "ENSMUST00000188244.1"; gene_type "protein_coding"; gene_name "1700040F15Rik"; transcript_type "protein_coding"; transcript_name "1700040F15Rik-201"; exon_number 10; exon_id "ENSMUSE00001326467.1"; level 2; protein_id "ENSMUSP00000140263.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045489.2"; havana_transcript "OTTMUST00000122503.1";
mm10-chrY	HAVANA	gene	61196077	61199308	.	+	.	gene_id "ENSMUSG00000100012.1"; gene_type "lincRNA"; gene_name "Gm29207"; level 2; havana_gene "OTTMUSG00000045506.1";
mm10-chrY	HAVANA	transcript	61196077	61199308	.	+	.	gene_id "ENSMUSG00000100012.1"; transcript_id "ENSMUST00000190931.1"; gene_type "lincRNA"; gene_name "Gm29207"; transcript_type "lincRNA"; transcript_name "Gm29207-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045506.1"; havana_transcript "OTTMUST00000119328.1";
mm10-chrY	HAVANA	exon	61196077	61196715	.	+	.	gene_id "ENSMUSG00000100012.1"; transcript_id "ENSMUST00000190931.1"; gene_type "lincRNA"; gene_name "Gm29207"; transcript_type "lincRNA"; transcript_name "Gm29207-202"; exon_number 1; exon_id "ENSMUSE00001321882.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045506.1"; havana_transcript "OTTMUST00000119328.1";
mm10-chrY	HAVANA	exon	61197200	61197382	.	+	.	gene_id "ENSMUSG00000100012.1"; transcript_id "ENSMUST00000190931.1"; gene_type "lincRNA"; gene_name "Gm29207"; transcript_type "lincRNA"; transcript_name "Gm29207-202"; exon_number 2; exon_id "ENSMUSE00001333988.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045506.1"; havana_transcript "OTTMUST00000119328.1";
mm10-chrY	HAVANA	exon	61198111	61198291	.	+	.	gene_id "ENSMUSG00000100012.1"; transcript_id "ENSMUST00000190931.1"; gene_type "lincRNA"; gene_name "Gm29207"; transcript_type "lincRNA"; transcript_name "Gm29207-202"; exon_number 3; exon_id "ENSMUSE00001323572.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045506.1"; havana_transcript "OTTMUST00000119328.1";
mm10-chrY	HAVANA	exon	61198819	61199308	.	+	.	gene_id "ENSMUSG00000100012.1"; transcript_id "ENSMUST00000190931.1"; gene_type "lincRNA"; gene_name "Gm29207"; transcript_type "lincRNA"; transcript_name "Gm29207-202"; exon_number 4; exon_id "ENSMUSE00001330719.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045506.1"; havana_transcript "OTTMUST00000119328.1";
mm10-chrY	HAVANA	transcript	61196530	61198884	.	+	.	gene_id "ENSMUSG00000100012.1"; transcript_id "ENSMUST00000186241.1"; gene_type "lincRNA"; gene_name "Gm29207"; transcript_type "lincRNA"; transcript_name "Gm29207-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045506.1"; havana_transcript "OTTMUST00000119329.1";
mm10-chrY	HAVANA	exon	61196530	61196715	.	+	.	gene_id "ENSMUSG00000100012.1"; transcript_id "ENSMUST00000186241.1"; gene_type "lincRNA"; gene_name "Gm29207"; transcript_type "lincRNA"; transcript_name "Gm29207-201"; exon_number 1; exon_id "ENSMUSE00001333387.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045506.1"; havana_transcript "OTTMUST00000119329.1";
mm10-chrY	HAVANA	exon	61197204	61197382	.	+	.	gene_id "ENSMUSG00000100012.1"; transcript_id "ENSMUST00000186241.1"; gene_type "lincRNA"; gene_name "Gm29207"; transcript_type "lincRNA"; transcript_name "Gm29207-201"; exon_number 2; exon_id "ENSMUSE00001324591.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045506.1"; havana_transcript "OTTMUST00000119329.1";
mm10-chrY	HAVANA	exon	61198819	61198884	.	+	.	gene_id "ENSMUSG00000100012.1"; transcript_id "ENSMUST00000186241.1"; gene_type "lincRNA"; gene_name "Gm29207"; transcript_type "lincRNA"; transcript_name "Gm29207-201"; exon_number 3; exon_id "ENSMUSE00001331865.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045506.1"; havana_transcript "OTTMUST00000119329.1";
mm10-chrY	HAVANA	gene	61224998	61228233	.	+	.	gene_id "ENSMUSG00000099836.1"; gene_type "lincRNA"; gene_name "Gm29204"; level 2; havana_gene "OTTMUSG00000045503.1";
mm10-chrY	HAVANA	transcript	61224998	61228233	.	+	.	gene_id "ENSMUSG00000099836.1"; transcript_id "ENSMUST00000187384.1"; gene_type "lincRNA"; gene_name "Gm29204"; transcript_type "lincRNA"; transcript_name "Gm29204-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045503.1"; havana_transcript "OTTMUST00000119324.1";
mm10-chrY	HAVANA	exon	61224998	61225635	.	+	.	gene_id "ENSMUSG00000099836.1"; transcript_id "ENSMUST00000187384.1"; gene_type "lincRNA"; gene_name "Gm29204"; transcript_type "lincRNA"; transcript_name "Gm29204-202"; exon_number 1; exon_id "ENSMUSE00001322405.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045503.1"; havana_transcript "OTTMUST00000119324.1";
mm10-chrY	HAVANA	exon	61226119	61226304	.	+	.	gene_id "ENSMUSG00000099836.1"; transcript_id "ENSMUST00000187384.1"; gene_type "lincRNA"; gene_name "Gm29204"; transcript_type "lincRNA"; transcript_name "Gm29204-202"; exon_number 2; exon_id "ENSMUSE00001335742.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045503.1"; havana_transcript "OTTMUST00000119324.1";
mm10-chrY	HAVANA	exon	61227032	61227215	.	+	.	gene_id "ENSMUSG00000099836.1"; transcript_id "ENSMUST00000187384.1"; gene_type "lincRNA"; gene_name "Gm29204"; transcript_type "lincRNA"; transcript_name "Gm29204-202"; exon_number 3; exon_id "ENSMUSE00001332238.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045503.1"; havana_transcript "OTTMUST00000119324.1";
mm10-chrY	HAVANA	exon	61227744	61228233	.	+	.	gene_id "ENSMUSG00000099836.1"; transcript_id "ENSMUST00000187384.1"; gene_type "lincRNA"; gene_name "Gm29204"; transcript_type "lincRNA"; transcript_name "Gm29204-202"; exon_number 4; exon_id "ENSMUSE00001319766.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045503.1"; havana_transcript "OTTMUST00000119324.1";
mm10-chrY	HAVANA	transcript	61225450	61227812	.	+	.	gene_id "ENSMUSG00000099836.1"; transcript_id "ENSMUST00000187054.1"; gene_type "lincRNA"; gene_name "Gm29204"; transcript_type "lincRNA"; transcript_name "Gm29204-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045503.1"; havana_transcript "OTTMUST00000119325.1";
mm10-chrY	HAVANA	exon	61225450	61225635	.	+	.	gene_id "ENSMUSG00000099836.1"; transcript_id "ENSMUST00000187054.1"; gene_type "lincRNA"; gene_name "Gm29204"; transcript_type "lincRNA"; transcript_name "Gm29204-201"; exon_number 1; exon_id "ENSMUSE00001328962.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045503.1"; havana_transcript "OTTMUST00000119325.1";
mm10-chrY	HAVANA	exon	61226123	61226304	.	+	.	gene_id "ENSMUSG00000099836.1"; transcript_id "ENSMUST00000187054.1"; gene_type "lincRNA"; gene_name "Gm29204"; transcript_type "lincRNA"; transcript_name "Gm29204-201"; exon_number 2; exon_id "ENSMUSE00001331579.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045503.1"; havana_transcript "OTTMUST00000119325.1";
mm10-chrY	HAVANA	exon	61227744	61227812	.	+	.	gene_id "ENSMUSG00000099836.1"; transcript_id "ENSMUST00000187054.1"; gene_type "lincRNA"; gene_name "Gm29204"; transcript_type "lincRNA"; transcript_name "Gm29204-201"; exon_number 3; exon_id "ENSMUSE00001332900.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045503.1"; havana_transcript "OTTMUST00000119325.1";
mm10-chrY	HAVANA	gene	61317789	61343815	.	-	.	gene_id "ENSMUSG00000100575.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21489"; level 2; havana_gene "OTTMUSG00000045509.1";
mm10-chrY	HAVANA	transcript	61317789	61343815	.	-	.	gene_id "ENSMUSG00000100575.1"; transcript_id "ENSMUST00000189668.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21489-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045509.1"; havana_transcript "OTTMUST00000119338.1";
mm10-chrY	HAVANA	exon	61343782	61343815	.	-	.	gene_id "ENSMUSG00000100575.1"; transcript_id "ENSMUST00000189668.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21489-201"; exon_number 1; exon_id "ENSMUSE00001324311.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045509.1"; havana_transcript "OTTMUST00000119338.1";
mm10-chrY	HAVANA	exon	61342269	61342400	.	-	.	gene_id "ENSMUSG00000100575.1"; transcript_id "ENSMUST00000189668.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21489-201"; exon_number 2; exon_id "ENSMUSE00001335335.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045509.1"; havana_transcript "OTTMUST00000119338.1";
mm10-chrY	HAVANA	exon	61336890	61336956	.	-	.	gene_id "ENSMUSG00000100575.1"; transcript_id "ENSMUST00000189668.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21489-201"; exon_number 3; exon_id "ENSMUSE00001329713.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045509.1"; havana_transcript "OTTMUST00000119338.1";
mm10-chrY	HAVANA	exon	61336280	61336314	.	-	.	gene_id "ENSMUSG00000100575.1"; transcript_id "ENSMUST00000189668.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21489-201"; exon_number 4; exon_id "ENSMUSE00001323841.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045509.1"; havana_transcript "OTTMUST00000119338.1";
mm10-chrY	HAVANA	exon	61321348	61321465	.	-	.	gene_id "ENSMUSG00000100575.1"; transcript_id "ENSMUST00000189668.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21489-201"; exon_number 5; exon_id "ENSMUSE00001334888.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045509.1"; havana_transcript "OTTMUST00000119338.1";
mm10-chrY	HAVANA	exon	61320505	61320604	.	-	.	gene_id "ENSMUSG00000100575.1"; transcript_id "ENSMUST00000189668.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21489-201"; exon_number 6; exon_id "ENSMUSE00001321028.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045509.1"; havana_transcript "OTTMUST00000119338.1";
mm10-chrY	HAVANA	exon	61318383	61318479	.	-	.	gene_id "ENSMUSG00000100575.1"; transcript_id "ENSMUST00000189668.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21489-201"; exon_number 7; exon_id "ENSMUSE00001326243.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045509.1"; havana_transcript "OTTMUST00000119338.1";
mm10-chrY	HAVANA	exon	61317789	61318023	.	-	.	gene_id "ENSMUSG00000100575.1"; transcript_id "ENSMUST00000189668.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21489"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21489-201"; exon_number 8; exon_id "ENSMUSE00001328376.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045509.1"; havana_transcript "OTTMUST00000119338.1";
mm10-chrY	HAVANA	gene	61385172	61385862	.	-	.	gene_id "ENSMUSG00000101676.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21832"; level 2; havana_gene "OTTMUSG00000045517.1";
mm10-chrY	HAVANA	transcript	61385172	61385862	.	-	.	gene_id "ENSMUSG00000101676.1"; transcript_id "ENSMUST00000186439.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21832-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045517.1"; havana_transcript "OTTMUST00000119353.1";
mm10-chrY	HAVANA	exon	61385172	61385862	.	-	.	gene_id "ENSMUSG00000101676.1"; transcript_id "ENSMUST00000186439.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21832"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21832-201"; exon_number 1; exon_id "ENSMUSE00001318804.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045517.1"; havana_transcript "OTTMUST00000119353.1";
mm10-chrY	HAVANA	gene	61460025	61460715	.	-	.	gene_id "ENSMUSG00000101510.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21573"; level 2; havana_gene "OTTMUSG00000045518.1";
mm10-chrY	HAVANA	transcript	61460025	61460715	.	-	.	gene_id "ENSMUSG00000101510.1"; transcript_id "ENSMUST00000190112.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21573-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045518.1"; havana_transcript "OTTMUST00000119354.1";
mm10-chrY	HAVANA	exon	61460025	61460715	.	-	.	gene_id "ENSMUSG00000101510.1"; transcript_id "ENSMUST00000190112.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21573-201"; exon_number 1; exon_id "ENSMUSE00001332720.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045518.1"; havana_transcript "OTTMUST00000119354.1";
mm10-chrY	HAVANA	gene	61487651	61491872	.	-	.	gene_id "ENSMUSG00000099393.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045510.1";
mm10-chrY	HAVANA	transcript	61487651	61489888	.	-	.	gene_id "ENSMUSG00000099393.6"; transcript_id "ENSMUST00000189029.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; transcript_type "processed_transcript"; transcript_name "Gm28179-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045510.1"; havana_transcript "OTTMUST00000119340.1";
mm10-chrY	HAVANA	exon	61489791	61489888	.	-	.	gene_id "ENSMUSG00000099393.6"; transcript_id "ENSMUST00000189029.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; transcript_type "processed_transcript"; transcript_name "Gm28179-202"; exon_number 1; exon_id "ENSMUSE00001332371.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045510.1"; havana_transcript "OTTMUST00000119340.1";
mm10-chrY	HAVANA	exon	61488211	61488394	.	-	.	gene_id "ENSMUSG00000099393.6"; transcript_id "ENSMUST00000189029.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; transcript_type "processed_transcript"; transcript_name "Gm28179-202"; exon_number 2; exon_id "ENSMUSE00001335617.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045510.1"; havana_transcript "OTTMUST00000119340.1";
mm10-chrY	HAVANA	exon	61487651	61487695	.	-	.	gene_id "ENSMUSG00000099393.6"; transcript_id "ENSMUST00000189029.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; transcript_type "processed_transcript"; transcript_name "Gm28179-202"; exon_number 3; exon_id "ENSMUSE00001321817.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045510.1"; havana_transcript "OTTMUST00000119340.1";
mm10-chrY	HAVANA	transcript	61487654	61491872	.	-	.	gene_id "ENSMUSG00000099393.6"; transcript_id "ENSMUST00000191382.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; transcript_type "processed_transcript"; transcript_name "Gm28179-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045510.1"; havana_transcript "OTTMUST00000119341.1";
mm10-chrY	HAVANA	exon	61491792	61491872	.	-	.	gene_id "ENSMUSG00000099393.6"; transcript_id "ENSMUST00000191382.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; transcript_type "processed_transcript"; transcript_name "Gm28179-203"; exon_number 1; exon_id "ENSMUSE00001335782.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045510.1"; havana_transcript "OTTMUST00000119341.1";
mm10-chrY	HAVANA	exon	61490232	61490468	.	-	.	gene_id "ENSMUSG00000099393.6"; transcript_id "ENSMUST00000191382.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; transcript_type "processed_transcript"; transcript_name "Gm28179-203"; exon_number 2; exon_id "ENSMUSE00001327971.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045510.1"; havana_transcript "OTTMUST00000119341.1";
mm10-chrY	HAVANA	exon	61488211	61488394	.	-	.	gene_id "ENSMUSG00000099393.6"; transcript_id "ENSMUST00000191382.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; transcript_type "processed_transcript"; transcript_name "Gm28179-203"; exon_number 3; exon_id "ENSMUSE00001335617.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045510.1"; havana_transcript "OTTMUST00000119341.1";
mm10-chrY	HAVANA	exon	61487654	61487695	.	-	.	gene_id "ENSMUSG00000099393.6"; transcript_id "ENSMUST00000191382.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; transcript_type "processed_transcript"; transcript_name "Gm28179-203"; exon_number 4; exon_id "ENSMUSE00001328290.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045510.1"; havana_transcript "OTTMUST00000119341.1";
mm10-chrY	HAVANA	transcript	61489713	61490325	.	-	.	gene_id "ENSMUSG00000099393.6"; transcript_id "ENSMUST00000188365.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; transcript_type "transcribed_processed_pseudogene"; transcript_name "Gm28179-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045510.1"; havana_transcript "OTTMUST00000119342.1";
mm10-chrY	HAVANA	exon	61489713	61490325	.	-	.	gene_id "ENSMUSG00000099393.6"; transcript_id "ENSMUST00000188365.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28179"; transcript_type "transcribed_processed_pseudogene"; transcript_name "Gm28179-201"; exon_number 1; exon_id "ENSMUSE00001332419.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045510.1"; havana_transcript "OTTMUST00000119342.1";
mm10-chrY	HAVANA	gene	61526583	61527279	.	-	.	gene_id "ENSMUSG00000100404.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21577"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045519.1";
mm10-chrY	HAVANA	transcript	61526583	61527279	.	-	.	gene_id "ENSMUSG00000100404.1"; transcript_id "ENSMUST00000190823.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21577"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21577-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045519.1"; havana_transcript "OTTMUST00000119355.1";
mm10-chrY	HAVANA	exon	61526583	61527279	.	-	.	gene_id "ENSMUSG00000100404.1"; transcript_id "ENSMUST00000190823.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21577"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21577-201"; exon_number 1; exon_id "ENSMUSE00001326212.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045519.1"; havana_transcript "OTTMUST00000119355.1";
mm10-chrY	HAVANA	gene	61556222	61583931	.	-	.	gene_id "ENSMUSG00000099865.1"; gene_type "lincRNA"; gene_name "Gm29206"; level 2; havana_gene "OTTMUSG00000045507.2";
mm10-chrY	HAVANA	transcript	61556222	61583931	.	-	.	gene_id "ENSMUSG00000099865.1"; transcript_id "ENSMUST00000189321.1"; gene_type "lincRNA"; gene_name "Gm29206"; transcript_type "lincRNA"; transcript_name "Gm29206-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045507.2"; havana_transcript "OTTMUST00000119330.2";
mm10-chrY	HAVANA	exon	61583873	61583931	.	-	.	gene_id "ENSMUSG00000099865.1"; transcript_id "ENSMUST00000189321.1"; gene_type "lincRNA"; gene_name "Gm29206"; transcript_type "lincRNA"; transcript_name "Gm29206-201"; exon_number 1; exon_id "ENSMUSE00001318969.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045507.2"; havana_transcript "OTTMUST00000119330.2";
mm10-chrY	HAVANA	exon	61580173	61580314	.	-	.	gene_id "ENSMUSG00000099865.1"; transcript_id "ENSMUST00000189321.1"; gene_type "lincRNA"; gene_name "Gm29206"; transcript_type "lincRNA"; transcript_name "Gm29206-201"; exon_number 2; exon_id "ENSMUSE00001333683.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045507.2"; havana_transcript "OTTMUST00000119330.2";
mm10-chrY	HAVANA	exon	61575040	61575131	.	-	.	gene_id "ENSMUSG00000099865.1"; transcript_id "ENSMUST00000189321.1"; gene_type "lincRNA"; gene_name "Gm29206"; transcript_type "lincRNA"; transcript_name "Gm29206-201"; exon_number 3; exon_id "ENSMUSE00001333540.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045507.2"; havana_transcript "OTTMUST00000119330.2";
mm10-chrY	HAVANA	exon	61573465	61573618	.	-	.	gene_id "ENSMUSG00000099865.1"; transcript_id "ENSMUST00000189321.1"; gene_type "lincRNA"; gene_name "Gm29206"; transcript_type "lincRNA"; transcript_name "Gm29206-201"; exon_number 4; exon_id "ENSMUSE00001322924.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045507.2"; havana_transcript "OTTMUST00000119330.2";
mm10-chrY	HAVANA	exon	61557841	61557993	.	-	.	gene_id "ENSMUSG00000099865.1"; transcript_id "ENSMUST00000189321.1"; gene_type "lincRNA"; gene_name "Gm29206"; transcript_type "lincRNA"; transcript_name "Gm29206-201"; exon_number 5; exon_id "ENSMUSE00001329465.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045507.2"; havana_transcript "OTTMUST00000119330.2";
mm10-chrY	HAVANA	exon	61556222	61556448	.	-	.	gene_id "ENSMUSG00000099865.1"; transcript_id "ENSMUST00000189321.1"; gene_type "lincRNA"; gene_name "Gm29206"; transcript_type "lincRNA"; transcript_name "Gm29206-201"; exon_number 6; exon_id "ENSMUSE00001318307.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045507.2"; havana_transcript "OTTMUST00000119330.2";
mm10-chrY	HAVANA	gene	61577303	61580542	.	+	.	gene_id "ENSMUSG00000101353.6"; gene_type "lincRNA"; gene_name "Gm29203"; level 2; havana_gene "OTTMUSG00000045500.1";
mm10-chrY	HAVANA	transcript	61577303	61580542	.	+	.	gene_id "ENSMUSG00000101353.6"; transcript_id "ENSMUST00000187355.6"; gene_type "lincRNA"; gene_name "Gm29203"; transcript_type "lincRNA"; transcript_name "Gm29203-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045500.1"; havana_transcript "OTTMUST00000119320.1";
mm10-chrY	HAVANA	exon	61577303	61577942	.	+	.	gene_id "ENSMUSG00000101353.6"; transcript_id "ENSMUST00000187355.6"; gene_type "lincRNA"; gene_name "Gm29203"; transcript_type "lincRNA"; transcript_name "Gm29203-201"; exon_number 1; exon_id "ENSMUSE00001326925.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045500.1"; havana_transcript "OTTMUST00000119320.1";
mm10-chrY	HAVANA	exon	61578432	61578613	.	+	.	gene_id "ENSMUSG00000101353.6"; transcript_id "ENSMUST00000187355.6"; gene_type "lincRNA"; gene_name "Gm29203"; transcript_type "lincRNA"; transcript_name "Gm29203-201"; exon_number 2; exon_id "ENSMUSE00001328589.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045500.1"; havana_transcript "OTTMUST00000119320.1";
mm10-chrY	HAVANA	exon	61579343	61579526	.	+	.	gene_id "ENSMUSG00000101353.6"; transcript_id "ENSMUST00000187355.6"; gene_type "lincRNA"; gene_name "Gm29203"; transcript_type "lincRNA"; transcript_name "Gm29203-201"; exon_number 3; exon_id "ENSMUSE00001321495.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045500.1"; havana_transcript "OTTMUST00000119320.1";
mm10-chrY	HAVANA	exon	61580054	61580542	.	+	.	gene_id "ENSMUSG00000101353.6"; transcript_id "ENSMUST00000187355.6"; gene_type "lincRNA"; gene_name "Gm29203"; transcript_type "lincRNA"; transcript_name "Gm29203-201"; exon_number 4; exon_id "ENSMUSE00001324081.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045500.1"; havana_transcript "OTTMUST00000119320.1";
mm10-chrY	HAVANA	transcript	61577756	61580122	.	+	.	gene_id "ENSMUSG00000101353.6"; transcript_id "ENSMUST00000188836.1"; gene_type "lincRNA"; gene_name "Gm29203"; transcript_type "lincRNA"; transcript_name "Gm29203-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045500.1"; havana_transcript "OTTMUST00000119321.1";
mm10-chrY	HAVANA	exon	61577756	61577942	.	+	.	gene_id "ENSMUSG00000101353.6"; transcript_id "ENSMUST00000188836.1"; gene_type "lincRNA"; gene_name "Gm29203"; transcript_type "lincRNA"; transcript_name "Gm29203-202"; exon_number 1; exon_id "ENSMUSE00001319220.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045500.1"; havana_transcript "OTTMUST00000119321.1";
mm10-chrY	HAVANA	exon	61578432	61578613	.	+	.	gene_id "ENSMUSG00000101353.6"; transcript_id "ENSMUST00000188836.1"; gene_type "lincRNA"; gene_name "Gm29203"; transcript_type "lincRNA"; transcript_name "Gm29203-202"; exon_number 2; exon_id "ENSMUSE00001328589.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045500.1"; havana_transcript "OTTMUST00000119321.1";
mm10-chrY	HAVANA	exon	61580054	61580122	.	+	.	gene_id "ENSMUSG00000101353.6"; transcript_id "ENSMUST00000188836.1"; gene_type "lincRNA"; gene_name "Gm29203"; transcript_type "lincRNA"; transcript_name "Gm29203-202"; exon_number 3; exon_id "ENSMUSE00001325209.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045500.1"; havana_transcript "OTTMUST00000119321.1";
mm10-chrY	HAVANA	gene	61646746	61672861	.	+	.	gene_id "ENSMUSG00000100726.1"; gene_type "protein_coding"; gene_name "Gm21497"; level 2; havana_gene "OTTMUSG00000045508.2";
mm10-chrY	HAVANA	transcript	61646746	61672861	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	exon	61646746	61646789	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 1; exon_id "ENSMUSE00001325227.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	exon	61648154	61648285	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 2; exon_id "ENSMUSE00001334849.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	CDS	61648168	61648285	.	+	0	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 2; exon_id "ENSMUSE00001334849.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	start_codon	61648168	61648170	.	+	0	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 2; exon_id "ENSMUSE00001334849.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	exon	61653617	61653683	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 3; exon_id "ENSMUSE00001326155.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	CDS	61653617	61653683	.	+	2	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 3; exon_id "ENSMUSE00001326155.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	exon	61654304	61654338	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 4; exon_id "ENSMUSE00001331269.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	CDS	61654304	61654338	.	+	1	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 4; exon_id "ENSMUSE00001331269.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	exon	61661348	61661414	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 5; exon_id "ENSMUSE00001333049.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	CDS	61661348	61661414	.	+	2	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 5; exon_id "ENSMUSE00001333049.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	exon	61661998	61662032	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 6; exon_id "ENSMUSE00001335714.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	CDS	61661998	61662032	.	+	1	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 6; exon_id "ENSMUSE00001335714.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	exon	61669178	61669295	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 7; exon_id "ENSMUSE00001330299.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	CDS	61669178	61669295	.	+	2	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 7; exon_id "ENSMUSE00001330299.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	exon	61670045	61670144	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 8; exon_id "ENSMUSE00001328120.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	CDS	61670045	61670144	.	+	1	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 8; exon_id "ENSMUSE00001328120.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	exon	61672182	61672280	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 9; exon_id "ENSMUSE00001336050.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	CDS	61672182	61672280	.	+	0	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 9; exon_id "ENSMUSE00001336050.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	exon	61672640	61672861	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 10; exon_id "ENSMUSE00001328221.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	CDS	61672640	61672666	.	+	0	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 10; exon_id "ENSMUSE00001328221.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	stop_codon	61672667	61672669	.	+	0	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 10; exon_id "ENSMUSE00001328221.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	UTR	61646746	61646789	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 1; exon_id "ENSMUSE00001325227.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	UTR	61648154	61648167	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 2; exon_id "ENSMUSE00001334849.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	UTR	61672667	61672861	.	+	.	gene_id "ENSMUSG00000100726.1"; transcript_id "ENSMUST00000189455.1"; gene_type "protein_coding"; gene_name "Gm21497"; transcript_type "protein_coding"; transcript_name "Gm21497-201"; exon_number 10; exon_id "ENSMUSE00001328221.1"; level 2; protein_id "ENSMUSP00000140668.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045508.2"; havana_transcript "OTTMUST00000119331.2";
mm10-chrY	HAVANA	gene	61734378	61735071	.	-	.	gene_id "ENSMUSG00000100474.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29614"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045520.1";
mm10-chrY	HAVANA	transcript	61734378	61735071	.	-	.	gene_id "ENSMUSG00000100474.1"; transcript_id "ENSMUST00000189263.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29614"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29614-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045520.1"; havana_transcript "OTTMUST00000119356.1";
mm10-chrY	HAVANA	exon	61734378	61735071	.	-	.	gene_id "ENSMUSG00000100474.1"; transcript_id "ENSMUST00000189263.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29614"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29614-201"; exon_number 1; exon_id "ENSMUSE00001325135.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045520.1"; havana_transcript "OTTMUST00000119356.1";
mm10-chrY	HAVANA	gene	61771371	61771683	.	-	.	gene_id "ENSMUSG00000100757.1"; gene_type "processed_pseudogene"; gene_name "Gm29613"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045521.1";
mm10-chrY	HAVANA	transcript	61771371	61771683	.	-	.	gene_id "ENSMUSG00000100757.1"; transcript_id "ENSMUST00000185846.1"; gene_type "processed_pseudogene"; gene_name "Gm29613"; transcript_type "processed_pseudogene"; transcript_name "Gm29613-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045521.1"; havana_transcript "OTTMUST00000119357.1";
mm10-chrY	HAVANA	exon	61771371	61771683	.	-	.	gene_id "ENSMUSG00000100757.1"; transcript_id "ENSMUST00000185846.1"; gene_type "processed_pseudogene"; gene_name "Gm29613"; transcript_type "processed_pseudogene"; transcript_name "Gm29613-201"; exon_number 1; exon_id "ENSMUSE00001324672.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045521.1"; havana_transcript "OTTMUST00000119357.1";
mm10-chrY	HAVANA	gene	61773101	61776445	.	-	.	gene_id "ENSMUSG00000100606.1"; gene_type "lincRNA"; gene_name "Gm29612"; level 2; havana_gene "OTTMUSG00000045522.1";
mm10-chrY	HAVANA	transcript	61773101	61776445	.	-	.	gene_id "ENSMUSG00000100606.1"; transcript_id "ENSMUST00000191490.1"; gene_type "lincRNA"; gene_name "Gm29612"; transcript_type "lincRNA"; transcript_name "Gm29612-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045522.1"; havana_transcript "OTTMUST00000119358.1";
mm10-chrY	HAVANA	exon	61776223	61776445	.	-	.	gene_id "ENSMUSG00000100606.1"; transcript_id "ENSMUST00000191490.1"; gene_type "lincRNA"; gene_name "Gm29612"; transcript_type "lincRNA"; transcript_name "Gm29612-201"; exon_number 1; exon_id "ENSMUSE00001329828.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045522.1"; havana_transcript "OTTMUST00000119358.1";
mm10-chrY	HAVANA	exon	61773101	61775045	.	-	.	gene_id "ENSMUSG00000100606.1"; transcript_id "ENSMUST00000191490.1"; gene_type "lincRNA"; gene_name "Gm29612"; transcript_type "lincRNA"; transcript_name "Gm29612-201"; exon_number 2; exon_id "ENSMUSE00001322725.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045522.1"; havana_transcript "OTTMUST00000119358.1";
mm10-chrY	HAVANA	gene	61789649	61815122	.	-	.	gene_id "ENSMUSG00000101170.1"; gene_type "lincRNA"; gene_name "Gm29343"; level 2; havana_gene "OTTMUSG00000045524.1";
mm10-chrY	HAVANA	transcript	61789649	61815122	.	-	.	gene_id "ENSMUSG00000101170.1"; transcript_id "ENSMUST00000187887.1"; gene_type "lincRNA"; gene_name "Gm29343"; transcript_type "lincRNA"; transcript_name "Gm29343-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045524.1"; havana_transcript "OTTMUST00000119361.1";
mm10-chrY	HAVANA	exon	61815064	61815122	.	-	.	gene_id "ENSMUSG00000101170.1"; transcript_id "ENSMUST00000187887.1"; gene_type "lincRNA"; gene_name "Gm29343"; transcript_type "lincRNA"; transcript_name "Gm29343-201"; exon_number 1; exon_id "ENSMUSE00001321158.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045524.1"; havana_transcript "OTTMUST00000119361.1";
mm10-chrY	HAVANA	exon	61811325	61811466	.	-	.	gene_id "ENSMUSG00000101170.1"; transcript_id "ENSMUST00000187887.1"; gene_type "lincRNA"; gene_name "Gm29343"; transcript_type "lincRNA"; transcript_name "Gm29343-201"; exon_number 2; exon_id "ENSMUSE00001324137.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045524.1"; havana_transcript "OTTMUST00000119361.1";
mm10-chrY	HAVANA	exon	61806275	61806366	.	-	.	gene_id "ENSMUSG00000101170.1"; transcript_id "ENSMUST00000187887.1"; gene_type "lincRNA"; gene_name "Gm29343"; transcript_type "lincRNA"; transcript_name "Gm29343-201"; exon_number 3; exon_id "ENSMUSE00001327217.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045524.1"; havana_transcript "OTTMUST00000119361.1";
mm10-chrY	HAVANA	exon	61804724	61804877	.	-	.	gene_id "ENSMUSG00000101170.1"; transcript_id "ENSMUST00000187887.1"; gene_type "lincRNA"; gene_name "Gm29343"; transcript_type "lincRNA"; transcript_name "Gm29343-201"; exon_number 4; exon_id "ENSMUSE00001318950.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045524.1"; havana_transcript "OTTMUST00000119361.1";
mm10-chrY	HAVANA	exon	61791343	61791495	.	-	.	gene_id "ENSMUSG00000101170.1"; transcript_id "ENSMUST00000187887.1"; gene_type "lincRNA"; gene_name "Gm29343"; transcript_type "lincRNA"; transcript_name "Gm29343-201"; exon_number 5; exon_id "ENSMUSE00001334956.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045524.1"; havana_transcript "OTTMUST00000119361.1";
mm10-chrY	HAVANA	exon	61789649	61789890	.	-	.	gene_id "ENSMUSG00000101170.1"; transcript_id "ENSMUST00000187887.1"; gene_type "lincRNA"; gene_name "Gm29343"; transcript_type "lincRNA"; transcript_name "Gm29343-201"; exon_number 6; exon_id "ENSMUSE00001320610.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045524.1"; havana_transcript "OTTMUST00000119361.1";
mm10-chrY	HAVANA	gene	61808456	61811695	.	+	.	gene_id "ENSMUSG00000099355.1"; gene_type "lincRNA"; gene_name "Gm29342"; level 2; havana_gene "OTTMUSG00000045525.1";
mm10-chrY	HAVANA	transcript	61808456	61811695	.	+	.	gene_id "ENSMUSG00000099355.1"; transcript_id "ENSMUST00000189689.1"; gene_type "lincRNA"; gene_name "Gm29342"; transcript_type "lincRNA"; transcript_name "Gm29342-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045525.1"; havana_transcript "OTTMUST00000119362.1";
mm10-chrY	HAVANA	exon	61808456	61809095	.	+	.	gene_id "ENSMUSG00000099355.1"; transcript_id "ENSMUST00000189689.1"; gene_type "lincRNA"; gene_name "Gm29342"; transcript_type "lincRNA"; transcript_name "Gm29342-202"; exon_number 1; exon_id "ENSMUSE00001318792.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045525.1"; havana_transcript "OTTMUST00000119362.1";
mm10-chrY	HAVANA	exon	61809581	61809766	.	+	.	gene_id "ENSMUSG00000099355.1"; transcript_id "ENSMUST00000189689.1"; gene_type "lincRNA"; gene_name "Gm29342"; transcript_type "lincRNA"; transcript_name "Gm29342-202"; exon_number 2; exon_id "ENSMUSE00001322609.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045525.1"; havana_transcript "OTTMUST00000119362.1";
mm10-chrY	HAVANA	exon	61810496	61810679	.	+	.	gene_id "ENSMUSG00000099355.1"; transcript_id "ENSMUST00000189689.1"; gene_type "lincRNA"; gene_name "Gm29342"; transcript_type "lincRNA"; transcript_name "Gm29342-202"; exon_number 3; exon_id "ENSMUSE00001327416.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045525.1"; havana_transcript "OTTMUST00000119362.1";
mm10-chrY	HAVANA	exon	61811206	61811695	.	+	.	gene_id "ENSMUSG00000099355.1"; transcript_id "ENSMUST00000189689.1"; gene_type "lincRNA"; gene_name "Gm29342"; transcript_type "lincRNA"; transcript_name "Gm29342-202"; exon_number 4; exon_id "ENSMUSE00001328078.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045525.1"; havana_transcript "OTTMUST00000119362.1";
mm10-chrY	HAVANA	transcript	61808909	61811274	.	+	.	gene_id "ENSMUSG00000099355.1"; transcript_id "ENSMUST00000188171.1"; gene_type "lincRNA"; gene_name "Gm29342"; transcript_type "lincRNA"; transcript_name "Gm29342-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045525.1"; havana_transcript "OTTMUST00000119363.1";
mm10-chrY	HAVANA	exon	61808909	61809095	.	+	.	gene_id "ENSMUSG00000099355.1"; transcript_id "ENSMUST00000188171.1"; gene_type "lincRNA"; gene_name "Gm29342"; transcript_type "lincRNA"; transcript_name "Gm29342-201"; exon_number 1; exon_id "ENSMUSE00001334804.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045525.1"; havana_transcript "OTTMUST00000119363.1";
mm10-chrY	HAVANA	exon	61809585	61809766	.	+	.	gene_id "ENSMUSG00000099355.1"; transcript_id "ENSMUST00000188171.1"; gene_type "lincRNA"; gene_name "Gm29342"; transcript_type "lincRNA"; transcript_name "Gm29342-201"; exon_number 2; exon_id "ENSMUSE00001332066.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045525.1"; havana_transcript "OTTMUST00000119363.1";
mm10-chrY	HAVANA	exon	61811206	61811274	.	+	.	gene_id "ENSMUSG00000099355.1"; transcript_id "ENSMUST00000188171.1"; gene_type "lincRNA"; gene_name "Gm29342"; transcript_type "lincRNA"; transcript_name "Gm29342-201"; exon_number 3; exon_id "ENSMUSE00001335689.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045525.1"; havana_transcript "OTTMUST00000119363.1";
mm10-chrY	HAVANA	gene	61945610	61947950	.	-	.	gene_id "ENSMUSG00000100559.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm20803"; level 2; havana_gene "OTTMUSG00000045532.1";
mm10-chrY	HAVANA	transcript	61945610	61947950	.	-	.	gene_id "ENSMUSG00000100559.1"; transcript_id "ENSMUST00000190968.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm20803"; transcript_type "processed_transcript"; transcript_name "Gm20803-202"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045532.1"; havana_transcript "OTTMUST00000119373.1";
mm10-chrY	HAVANA	exon	61947827	61947950	.	-	.	gene_id "ENSMUSG00000100559.1"; transcript_id "ENSMUST00000190968.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm20803"; transcript_type "processed_transcript"; transcript_name "Gm20803-202"; exon_number 1; exon_id "ENSMUSE00001330525.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045532.1"; havana_transcript "OTTMUST00000119373.1";
mm10-chrY	HAVANA	exon	61945610	61946715	.	-	.	gene_id "ENSMUSG00000100559.1"; transcript_id "ENSMUST00000190968.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm20803"; transcript_type "processed_transcript"; transcript_name "Gm20803-202"; exon_number 2; exon_id "ENSMUSE00001328991.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045532.1"; havana_transcript "OTTMUST00000119373.1";
mm10-chrY	HAVANA	transcript	61945740	61946433	.	-	.	gene_id "ENSMUSG00000100559.1"; transcript_id "ENSMUST00000187186.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm20803"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm20803-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045532.1"; havana_transcript "OTTMUST00000119374.1";
mm10-chrY	HAVANA	exon	61945740	61946433	.	-	.	gene_id "ENSMUSG00000100559.1"; transcript_id "ENSMUST00000187186.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm20803"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm20803-201"; exon_number 1; exon_id "ENSMUSE00001320920.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045532.1"; havana_transcript "OTTMUST00000119374.1";
mm10-chrY	HAVANA	gene	62020383	62021078	.	-	.	gene_id "ENSMUSG00000099739.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20804"; level 2; havana_gene "OTTMUSG00000045533.1";
mm10-chrY	HAVANA	transcript	62020383	62021078	.	-	.	gene_id "ENSMUSG00000099739.1"; transcript_id "ENSMUST00000188372.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20804"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20804-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045533.1"; havana_transcript "OTTMUST00000119375.1";
mm10-chrY	HAVANA	exon	62020383	62021078	.	-	.	gene_id "ENSMUSG00000099739.1"; transcript_id "ENSMUST00000188372.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20804"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20804-201"; exon_number 1; exon_id "ENSMUSE00001332364.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045533.1"; havana_transcript "OTTMUST00000119375.1";
mm10-chrY	HAVANA	gene	62050034	62050648	.	-	.	gene_id "ENSMUSG00000100874.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28598"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045534.1";
mm10-chrY	HAVANA	transcript	62050034	62050648	.	-	.	gene_id "ENSMUSG00000100874.1"; transcript_id "ENSMUST00000186490.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28598"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28598-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045534.1"; havana_transcript "OTTMUST00000119376.1";
mm10-chrY	HAVANA	exon	62050034	62050648	.	-	.	gene_id "ENSMUSG00000100874.1"; transcript_id "ENSMUST00000186490.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28598"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28598-201"; exon_number 1; exon_id "ENSMUSE00001327024.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045534.1"; havana_transcript "OTTMUST00000119376.1";
mm10-chrY	HAVANA	gene	62086944	62087637	.	-	.	gene_id "ENSMUSG00000101689.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28599"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045535.1";
mm10-chrY	HAVANA	transcript	62086944	62087637	.	-	.	gene_id "ENSMUSG00000101689.1"; transcript_id "ENSMUST00000189838.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28599"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28599-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045535.1"; havana_transcript "OTTMUST00000119377.1";
mm10-chrY	HAVANA	exon	62086944	62087637	.	-	.	gene_id "ENSMUSG00000101689.1"; transcript_id "ENSMUST00000189838.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28599"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28599-201"; exon_number 1; exon_id "ENSMUSE00001331997.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045535.1"; havana_transcript "OTTMUST00000119377.1";
mm10-chrY	HAVANA	gene	62128751	62131989	.	+	.	gene_id "ENSMUSG00000101285.6"; gene_type "lincRNA"; gene_name "Gm28600"; level 2; havana_gene "OTTMUSG00000045536.1";
mm10-chrY	HAVANA	transcript	62128751	62131989	.	+	.	gene_id "ENSMUSG00000101285.6"; transcript_id "ENSMUST00000189502.6"; gene_type "lincRNA"; gene_name "Gm28600"; transcript_type "lincRNA"; transcript_name "Gm28600-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045536.1"; havana_transcript "OTTMUST00000119378.1";
mm10-chrY	HAVANA	exon	62128751	62129390	.	+	.	gene_id "ENSMUSG00000101285.6"; transcript_id "ENSMUST00000189502.6"; gene_type "lincRNA"; gene_name "Gm28600"; transcript_type "lincRNA"; transcript_name "Gm28600-202"; exon_number 1; exon_id "ENSMUSE00001331128.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045536.1"; havana_transcript "OTTMUST00000119378.1";
mm10-chrY	HAVANA	exon	62129880	62130061	.	+	.	gene_id "ENSMUSG00000101285.6"; transcript_id "ENSMUST00000189502.6"; gene_type "lincRNA"; gene_name "Gm28600"; transcript_type "lincRNA"; transcript_name "Gm28600-202"; exon_number 2; exon_id "ENSMUSE00001335048.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045536.1"; havana_transcript "OTTMUST00000119378.1";
mm10-chrY	HAVANA	exon	62130790	62130973	.	+	.	gene_id "ENSMUSG00000101285.6"; transcript_id "ENSMUST00000189502.6"; gene_type "lincRNA"; gene_name "Gm28600"; transcript_type "lincRNA"; transcript_name "Gm28600-202"; exon_number 3; exon_id "ENSMUSE00001318403.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045536.1"; havana_transcript "OTTMUST00000119378.1";
mm10-chrY	HAVANA	exon	62131501	62131989	.	+	.	gene_id "ENSMUSG00000101285.6"; transcript_id "ENSMUST00000189502.6"; gene_type "lincRNA"; gene_name "Gm28600"; transcript_type "lincRNA"; transcript_name "Gm28600-202"; exon_number 4; exon_id "ENSMUSE00001328225.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045536.1"; havana_transcript "OTTMUST00000119378.1";
mm10-chrY	HAVANA	transcript	62129204	62131569	.	+	.	gene_id "ENSMUSG00000101285.6"; transcript_id "ENSMUST00000187374.1"; gene_type "lincRNA"; gene_name "Gm28600"; transcript_type "lincRNA"; transcript_name "Gm28600-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045536.1"; havana_transcript "OTTMUST00000119379.1";
mm10-chrY	HAVANA	exon	62129204	62129390	.	+	.	gene_id "ENSMUSG00000101285.6"; transcript_id "ENSMUST00000187374.1"; gene_type "lincRNA"; gene_name "Gm28600"; transcript_type "lincRNA"; transcript_name "Gm28600-201"; exon_number 1; exon_id "ENSMUSE00001334284.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045536.1"; havana_transcript "OTTMUST00000119379.1";
mm10-chrY	HAVANA	exon	62129880	62130061	.	+	.	gene_id "ENSMUSG00000101285.6"; transcript_id "ENSMUST00000187374.1"; gene_type "lincRNA"; gene_name "Gm28600"; transcript_type "lincRNA"; transcript_name "Gm28600-201"; exon_number 2; exon_id "ENSMUSE00001335048.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045536.1"; havana_transcript "OTTMUST00000119379.1";
mm10-chrY	HAVANA	exon	62131501	62131569	.	+	.	gene_id "ENSMUSG00000101285.6"; transcript_id "ENSMUST00000187374.1"; gene_type "lincRNA"; gene_name "Gm28600"; transcript_type "lincRNA"; transcript_name "Gm28600-201"; exon_number 3; exon_id "ENSMUSE00001321102.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045536.1"; havana_transcript "OTTMUST00000119379.1";
mm10-chrY	HAVANA	gene	62190866	62217137	.	+	.	gene_id "ENSMUSG00000094821.7"; gene_type "protein_coding"; gene_name "Gm21518"; level 2; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	HAVANA	transcript	62190866	62217137	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	exon	62190866	62190909	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 1; exon_id "ENSMUSE00001323356.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	exon	62192275	62192406	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 2; exon_id "ENSMUSE00001329786.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	CDS	62192289	62192406	.	+	0	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 2; exon_id "ENSMUSE00001329786.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	start_codon	62192289	62192291	.	+	0	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 2; exon_id "ENSMUSE00001329786.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	exon	62197742	62197808	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 3; exon_id "ENSMUSE00001012818.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	CDS	62197742	62197808	.	+	2	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 3; exon_id "ENSMUSE00001012818.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	exon	62198495	62198529	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 4; exon_id "ENSMUSE00000973423.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	CDS	62198495	62198529	.	+	1	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 4; exon_id "ENSMUSE00000973423.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	exon	62205565	62205631	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 5; exon_id "ENSMUSE00001326100.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	CDS	62205565	62205631	.	+	2	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 5; exon_id "ENSMUSE00001326100.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	exon	62206216	62206250	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 6; exon_id "ENSMUSE00001330353.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	CDS	62206216	62206250	.	+	1	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 6; exon_id "ENSMUSE00001330353.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	exon	62213427	62213544	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 7; exon_id "ENSMUSE00001071705.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	CDS	62213427	62213544	.	+	2	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 7; exon_id "ENSMUSE00001071705.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	exon	62214311	62214410	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 8; exon_id "ENSMUSE00000966253.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	CDS	62214311	62214410	.	+	1	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 8; exon_id "ENSMUSE00000966253.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	exon	62216455	62216553	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 9; exon_id "ENSMUSE00001061663.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	CDS	62216455	62216553	.	+	0	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 9; exon_id "ENSMUSE00001061663.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	exon	62216913	62217137	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 10; exon_id "ENSMUSE00001320706.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	CDS	62216913	62216939	.	+	0	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 10; exon_id "ENSMUSE00001320706.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	stop_codon	62216940	62216942	.	+	0	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 10; exon_id "ENSMUSE00001320706.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	UTR	62190866	62190909	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 1; exon_id "ENSMUSE00001323356.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	UTR	62192275	62192288	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 2; exon_id "ENSMUSE00001329786.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	HAVANA	UTR	62216940	62217137	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000186938.6"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-202"; exon_number 10; exon_id "ENSMUSE00001320706.1"; level 2; protein_id "ENSMUSP00000140794.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045537.3"; havana_transcript "OTTMUST00000122524.1";
mm10-chrY	ENSEMBL	transcript	62192289	62216942	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	exon	62192289	62192406	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 1; exon_id "ENSMUSE00000995004.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	CDS	62192289	62192406	.	+	0	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 1; exon_id "ENSMUSE00000995004.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	start_codon	62192289	62192291	.	+	0	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 1; exon_id "ENSMUSE00000995004.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	exon	62197742	62197808	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 2; exon_id "ENSMUSE00001012818.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	CDS	62197742	62197808	.	+	2	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 2; exon_id "ENSMUSE00001012818.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	exon	62198495	62198529	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 3; exon_id "ENSMUSE00000973423.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	CDS	62198495	62198529	.	+	1	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 3; exon_id "ENSMUSE00000973423.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	exon	62213427	62213544	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 4; exon_id "ENSMUSE00001071705.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	CDS	62213427	62213544	.	+	2	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 4; exon_id "ENSMUSE00001071705.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	exon	62214311	62214410	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 5; exon_id "ENSMUSE00000966253.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	CDS	62214311	62214410	.	+	1	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 5; exon_id "ENSMUSE00000966253.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	exon	62216455	62216553	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 6; exon_id "ENSMUSE00001061663.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	CDS	62216455	62216553	.	+	0	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 6; exon_id "ENSMUSE00001061663.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	exon	62216913	62216942	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 7; exon_id "ENSMUSE00001037894.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	CDS	62216913	62216939	.	+	0	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 7; exon_id "ENSMUSE00001037894.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	stop_codon	62216940	62216942	.	+	0	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 7; exon_id "ENSMUSE00001037894.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	ENSEMBL	UTR	62216940	62216942	.	+	.	gene_id "ENSMUSG00000094821.7"; transcript_id "ENSMUST00000178115.1"; gene_type "protein_coding"; gene_name "Gm21518"; transcript_type "protein_coding"; transcript_name "Gm21518-201"; exon_number 7; exon_id "ENSMUSE00001037894.1"; level 3; protein_id "ENSMUSP00000136187.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045537.3";
mm10-chrY	HAVANA	gene	62278251	62278944	.	-	.	gene_id "ENSMUSG00000099626.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28185"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045556.1";
mm10-chrY	HAVANA	transcript	62278251	62278944	.	-	.	gene_id "ENSMUSG00000099626.1"; transcript_id "ENSMUST00000186815.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28185"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28185-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045556.1"; havana_transcript "OTTMUST00000119404.1";
mm10-chrY	HAVANA	exon	62278251	62278944	.	-	.	gene_id "ENSMUSG00000099626.1"; transcript_id "ENSMUST00000186815.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28185"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28185-201"; exon_number 1; exon_id "ENSMUSE00001321783.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045556.1"; havana_transcript "OTTMUST00000119404.1";
mm10-chrY	HAVANA	gene	62315220	62315532	.	-	.	gene_id "ENSMUSG00000102108.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29037"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045557.1";
mm10-chrY	HAVANA	transcript	62315220	62315532	.	-	.	gene_id "ENSMUSG00000102108.1"; transcript_id "ENSMUST00000189092.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29037"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29037-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045557.1"; havana_transcript "OTTMUST00000119405.1";
mm10-chrY	HAVANA	exon	62315220	62315532	.	-	.	gene_id "ENSMUSG00000102108.1"; transcript_id "ENSMUST00000189092.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29037"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29037-201"; exon_number 1; exon_id "ENSMUSE00001326877.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045557.1"; havana_transcript "OTTMUST00000119405.1";
mm10-chrY	HAVANA	gene	62462504	62464845	.	-	.	gene_id "ENSMUSG00000093950.2"; gene_type "protein_coding"; gene_name "Gm20823"; level 2; havana_gene "OTTMUSG00000045558.2";
mm10-chrY	HAVANA	transcript	62462504	62464845	.	-	.	gene_id "ENSMUSG00000093950.2"; transcript_id "ENSMUST00000179949.2"; gene_type "protein_coding"; gene_name "Gm20823"; transcript_type "protein_coding"; transcript_name "Gm20823-201"; level 2; protein_id "ENSMUSP00000136451.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85889.1"; havana_gene "OTTMUSG00000045558.2"; havana_transcript "OTTMUST00000119407.2";
mm10-chrY	HAVANA	exon	62464722	62464845	.	-	.	gene_id "ENSMUSG00000093950.2"; transcript_id "ENSMUST00000179949.2"; gene_type "protein_coding"; gene_name "Gm20823"; transcript_type "protein_coding"; transcript_name "Gm20823-201"; exon_number 1; exon_id "ENSMUSE00000985967.1"; level 2; protein_id "ENSMUSP00000136451.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85889.1"; havana_gene "OTTMUSG00000045558.2"; havana_transcript "OTTMUST00000119407.2";
mm10-chrY	HAVANA	exon	62462504	62463610	.	-	.	gene_id "ENSMUSG00000093950.2"; transcript_id "ENSMUST00000179949.2"; gene_type "protein_coding"; gene_name "Gm20823"; transcript_type "protein_coding"; transcript_name "Gm20823-201"; exon_number 2; exon_id "ENSMUSE00001021165.2"; level 2; protein_id "ENSMUSP00000136451.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85889.1"; havana_gene "OTTMUSG00000045558.2"; havana_transcript "OTTMUST00000119407.2";
mm10-chrY	HAVANA	CDS	62462648	62463328	.	-	0	gene_id "ENSMUSG00000093950.2"; transcript_id "ENSMUST00000179949.2"; gene_type "protein_coding"; gene_name "Gm20823"; transcript_type "protein_coding"; transcript_name "Gm20823-201"; exon_number 2; exon_id "ENSMUSE00001021165.2"; level 2; protein_id "ENSMUSP00000136451.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85889.1"; havana_gene "OTTMUSG00000045558.2"; havana_transcript "OTTMUST00000119407.2";
mm10-chrY	HAVANA	start_codon	62463326	62463328	.	-	0	gene_id "ENSMUSG00000093950.2"; transcript_id "ENSMUST00000179949.2"; gene_type "protein_coding"; gene_name "Gm20823"; transcript_type "protein_coding"; transcript_name "Gm20823-201"; exon_number 2; exon_id "ENSMUSE00001021165.2"; level 2; protein_id "ENSMUSP00000136451.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85889.1"; havana_gene "OTTMUSG00000045558.2"; havana_transcript "OTTMUST00000119407.2";
mm10-chrY	HAVANA	stop_codon	62462645	62462647	.	-	0	gene_id "ENSMUSG00000093950.2"; transcript_id "ENSMUST00000179949.2"; gene_type "protein_coding"; gene_name "Gm20823"; transcript_type "protein_coding"; transcript_name "Gm20823-201"; exon_number 2; exon_id "ENSMUSE00001021165.2"; level 2; protein_id "ENSMUSP00000136451.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85889.1"; havana_gene "OTTMUSG00000045558.2"; havana_transcript "OTTMUST00000119407.2";
mm10-chrY	HAVANA	UTR	62464722	62464845	.	-	.	gene_id "ENSMUSG00000093950.2"; transcript_id "ENSMUST00000179949.2"; gene_type "protein_coding"; gene_name "Gm20823"; transcript_type "protein_coding"; transcript_name "Gm20823-201"; exon_number 1; exon_id "ENSMUSE00000985967.1"; level 2; protein_id "ENSMUSP00000136451.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85889.1"; havana_gene "OTTMUSG00000045558.2"; havana_transcript "OTTMUST00000119407.2";
mm10-chrY	HAVANA	UTR	62462504	62462647	.	-	.	gene_id "ENSMUSG00000093950.2"; transcript_id "ENSMUST00000179949.2"; gene_type "protein_coding"; gene_name "Gm20823"; transcript_type "protein_coding"; transcript_name "Gm20823-201"; exon_number 2; exon_id "ENSMUSE00001021165.2"; level 2; protein_id "ENSMUSP00000136451.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85889.1"; havana_gene "OTTMUSG00000045558.2"; havana_transcript "OTTMUST00000119407.2";
mm10-chrY	HAVANA	UTR	62463329	62463610	.	-	.	gene_id "ENSMUSG00000093950.2"; transcript_id "ENSMUST00000179949.2"; gene_type "protein_coding"; gene_name "Gm20823"; transcript_type "protein_coding"; transcript_name "Gm20823-201"; exon_number 2; exon_id "ENSMUSE00001021165.2"; level 2; protein_id "ENSMUSP00000136451.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85889.1"; havana_gene "OTTMUSG00000045558.2"; havana_transcript "OTTMUST00000119407.2";
mm10-chrY	HAVANA	gene	62537238	62537931	.	-	.	gene_id "ENSMUSG00000101323.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21877"; level 2; havana_gene "OTTMUSG00000045561.1";
mm10-chrY	HAVANA	transcript	62537238	62537931	.	-	.	gene_id "ENSMUSG00000101323.1"; transcript_id "ENSMUST00000185640.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21877"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21877-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045561.1"; havana_transcript "OTTMUST00000119412.1";
mm10-chrY	HAVANA	exon	62537238	62537931	.	-	.	gene_id "ENSMUSG00000101323.1"; transcript_id "ENSMUST00000185640.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21877"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21877-201"; exon_number 1; exon_id "ENSMUSE00001331599.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045561.1"; havana_transcript "OTTMUST00000119412.1";
mm10-chrY	HAVANA	gene	62564851	62569079	.	-	.	gene_id "ENSMUSG00000101326.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045562.1";
mm10-chrY	HAVANA	transcript	62564851	62569053	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000188415.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "processed_transcript"; transcript_name "Gm28835-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119413.1";
mm10-chrY	HAVANA	exon	62569000	62569053	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000188415.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "processed_transcript"; transcript_name "Gm28835-201"; exon_number 1; exon_id "ENSMUSE00001331559.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119413.1";
mm10-chrY	HAVANA	exon	62567015	62567145	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000188415.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "processed_transcript"; transcript_name "Gm28835-201"; exon_number 2; exon_id "ENSMUSE00001321535.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119413.1";
mm10-chrY	HAVANA	exon	62566313	62566530	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000188415.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "processed_transcript"; transcript_name "Gm28835-201"; exon_number 3; exon_id "ENSMUSE00001328674.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119413.1";
mm10-chrY	HAVANA	exon	62565434	62565617	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000188415.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "processed_transcript"; transcript_name "Gm28835-201"; exon_number 4; exon_id "ENSMUSE00001326881.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119413.1";
mm10-chrY	HAVANA	exon	62564851	62564918	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000188415.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "processed_transcript"; transcript_name "Gm28835-201"; exon_number 5; exon_id "ENSMUSE00001322472.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119413.1";
mm10-chrY	HAVANA	transcript	62564877	62569079	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000189206.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "processed_transcript"; transcript_name "Gm28835-202"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119414.1";
mm10-chrY	HAVANA	exon	62569000	62569079	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000189206.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "processed_transcript"; transcript_name "Gm28835-202"; exon_number 1; exon_id "ENSMUSE00001319310.1"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119414.1";
mm10-chrY	HAVANA	exon	62567456	62567692	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000189206.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "processed_transcript"; transcript_name "Gm28835-202"; exon_number 2; exon_id "ENSMUSE00001333562.1"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119414.1";
mm10-chrY	HAVANA	exon	62565434	62565617	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000189206.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "processed_transcript"; transcript_name "Gm28835-202"; exon_number 3; exon_id "ENSMUSE00001326881.1"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119414.1";
mm10-chrY	HAVANA	exon	62564877	62564918	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000189206.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "processed_transcript"; transcript_name "Gm28835-202"; exon_number 4; exon_id "ENSMUSE00001322295.1"; level 2; transcript_support_level "3"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119414.1";
mm10-chrY	HAVANA	transcript	62566935	62567549	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000190062.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28835-203"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119415.1";
mm10-chrY	HAVANA	exon	62566935	62567549	.	-	.	gene_id "ENSMUSG00000101326.6"; transcript_id "ENSMUST00000190062.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28835"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28835-203"; exon_number 1; exon_id "ENSMUSE00001332603.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045562.1"; havana_transcript "OTTMUST00000119415.1";
mm10-chrY	HAVANA	gene	62603763	62604456	.	-	.	gene_id "ENSMUSG00000101466.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29548"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045563.1";
mm10-chrY	HAVANA	transcript	62603763	62604456	.	-	.	gene_id "ENSMUSG00000101466.1"; transcript_id "ENSMUST00000187012.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29548"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29548-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045563.1"; havana_transcript "OTTMUST00000119416.1";
mm10-chrY	HAVANA	exon	62603763	62604456	.	-	.	gene_id "ENSMUSG00000101466.1"; transcript_id "ENSMUST00000187012.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29548"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29548-201"; exon_number 1; exon_id "ENSMUSE00001326803.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045563.1"; havana_transcript "OTTMUST00000119416.1";
mm10-chrY	HAVANA	gene	62648296	62651535	.	+	.	gene_id "ENSMUSG00000101614.1"; gene_type "lincRNA"; gene_name "Gm29547"; level 2; havana_gene "OTTMUSG00000045564.1";
mm10-chrY	HAVANA	transcript	62648296	62651535	.	+	.	gene_id "ENSMUSG00000101614.1"; transcript_id "ENSMUST00000187258.1"; gene_type "lincRNA"; gene_name "Gm29547"; transcript_type "lincRNA"; transcript_name "Gm29547-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045564.1"; havana_transcript "OTTMUST00000119417.1";
mm10-chrY	HAVANA	exon	62648296	62648935	.	+	.	gene_id "ENSMUSG00000101614.1"; transcript_id "ENSMUST00000187258.1"; gene_type "lincRNA"; gene_name "Gm29547"; transcript_type "lincRNA"; transcript_name "Gm29547-201"; exon_number 1; exon_id "ENSMUSE00001321904.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045564.1"; havana_transcript "OTTMUST00000119417.1";
mm10-chrY	HAVANA	exon	62649421	62649606	.	+	.	gene_id "ENSMUSG00000101614.1"; transcript_id "ENSMUST00000187258.1"; gene_type "lincRNA"; gene_name "Gm29547"; transcript_type "lincRNA"; transcript_name "Gm29547-201"; exon_number 2; exon_id "ENSMUSE00001333334.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045564.1"; havana_transcript "OTTMUST00000119417.1";
mm10-chrY	HAVANA	exon	62650337	62650520	.	+	.	gene_id "ENSMUSG00000101614.1"; transcript_id "ENSMUST00000187258.1"; gene_type "lincRNA"; gene_name "Gm29547"; transcript_type "lincRNA"; transcript_name "Gm29547-201"; exon_number 3; exon_id "ENSMUSE00001330212.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045564.1"; havana_transcript "OTTMUST00000119417.1";
mm10-chrY	HAVANA	exon	62651047	62651535	.	+	.	gene_id "ENSMUSG00000101614.1"; transcript_id "ENSMUST00000187258.1"; gene_type "lincRNA"; gene_name "Gm29547"; transcript_type "lincRNA"; transcript_name "Gm29547-201"; exon_number 4; exon_id "ENSMUSE00001326391.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045564.1"; havana_transcript "OTTMUST00000119417.1";
mm10-chrY	HAVANA	transcript	62648749	62651115	.	+	.	gene_id "ENSMUSG00000101614.1"; transcript_id "ENSMUST00000187635.1"; gene_type "lincRNA"; gene_name "Gm29547"; transcript_type "lincRNA"; transcript_name "Gm29547-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045564.1"; havana_transcript "OTTMUST00000119418.1";
mm10-chrY	HAVANA	exon	62648749	62648935	.	+	.	gene_id "ENSMUSG00000101614.1"; transcript_id "ENSMUST00000187635.1"; gene_type "lincRNA"; gene_name "Gm29547"; transcript_type "lincRNA"; transcript_name "Gm29547-202"; exon_number 1; exon_id "ENSMUSE00001328772.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045564.1"; havana_transcript "OTTMUST00000119418.1";
mm10-chrY	HAVANA	exon	62649425	62649606	.	+	.	gene_id "ENSMUSG00000101614.1"; transcript_id "ENSMUST00000187635.1"; gene_type "lincRNA"; gene_name "Gm29547"; transcript_type "lincRNA"; transcript_name "Gm29547-202"; exon_number 2; exon_id "ENSMUSE00001328118.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045564.1"; havana_transcript "OTTMUST00000119418.1";
mm10-chrY	HAVANA	exon	62651047	62651115	.	+	.	gene_id "ENSMUSG00000101614.1"; transcript_id "ENSMUST00000187635.1"; gene_type "lincRNA"; gene_name "Gm29547"; transcript_type "lincRNA"; transcript_name "Gm29547-202"; exon_number 3; exon_id "ENSMUSE00001319404.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045564.1"; havana_transcript "OTTMUST00000119418.1";
mm10-chrY	HAVANA	gene	62717008	62741658	.	+	.	gene_id "ENSMUSG00000100307.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29546"; level 2; havana_gene "OTTMUSG00000045565.1";
mm10-chrY	HAVANA	transcript	62717008	62741658	.	+	.	gene_id "ENSMUSG00000100307.1"; transcript_id "ENSMUST00000191171.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29546-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045565.1"; havana_transcript "OTTMUST00000119419.1";
mm10-chrY	HAVANA	exon	62717008	62717139	.	+	.	gene_id "ENSMUSG00000100307.1"; transcript_id "ENSMUST00000191171.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29546-201"; exon_number 1; exon_id "ENSMUSE00001322644.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045565.1"; havana_transcript "OTTMUST00000119419.1";
mm10-chrY	HAVANA	exon	62722477	62722543	.	+	.	gene_id "ENSMUSG00000100307.1"; transcript_id "ENSMUST00000191171.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29546-201"; exon_number 2; exon_id "ENSMUSE00001328889.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045565.1"; havana_transcript "OTTMUST00000119419.1";
mm10-chrY	HAVANA	exon	62723198	62723232	.	+	.	gene_id "ENSMUSG00000100307.1"; transcript_id "ENSMUST00000191171.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29546-201"; exon_number 3; exon_id "ENSMUSE00001334586.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045565.1"; havana_transcript "OTTMUST00000119419.1";
mm10-chrY	HAVANA	exon	62730271	62730337	.	+	.	gene_id "ENSMUSG00000100307.1"; transcript_id "ENSMUST00000191171.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29546-201"; exon_number 4; exon_id "ENSMUSE00001319010.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045565.1"; havana_transcript "OTTMUST00000119419.1";
mm10-chrY	HAVANA	exon	62730923	62730957	.	+	.	gene_id "ENSMUSG00000100307.1"; transcript_id "ENSMUST00000191171.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29546-201"; exon_number 5; exon_id "ENSMUSE00001325213.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045565.1"; havana_transcript "OTTMUST00000119419.1";
mm10-chrY	HAVANA	exon	62738123	62738240	.	+	.	gene_id "ENSMUSG00000100307.1"; transcript_id "ENSMUST00000191171.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29546-201"; exon_number 6; exon_id "ENSMUSE00001335746.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045565.1"; havana_transcript "OTTMUST00000119419.1";
mm10-chrY	HAVANA	exon	62739028	62739127	.	+	.	gene_id "ENSMUSG00000100307.1"; transcript_id "ENSMUST00000191171.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29546-201"; exon_number 7; exon_id "ENSMUSE00001331786.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045565.1"; havana_transcript "OTTMUST00000119419.1";
mm10-chrY	HAVANA	exon	62741176	62741274	.	+	.	gene_id "ENSMUSG00000100307.1"; transcript_id "ENSMUST00000191171.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29546-201"; exon_number 8; exon_id "ENSMUSE00001334867.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045565.1"; havana_transcript "OTTMUST00000119419.1";
mm10-chrY	HAVANA	exon	62741634	62741658	.	+	.	gene_id "ENSMUSG00000100307.1"; transcript_id "ENSMUST00000191171.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29546"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29546-201"; exon_number 9; exon_id "ENSMUSE00001324004.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045565.1"; havana_transcript "OTTMUST00000119419.1";
mm10-chrY	HAVANA	gene	62802222	62802915	.	-	.	gene_id "ENSMUSG00000101882.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29545"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045566.1";
mm10-chrY	HAVANA	transcript	62802222	62802915	.	-	.	gene_id "ENSMUSG00000101882.1"; transcript_id "ENSMUST00000188878.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29545"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29545-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045566.1"; havana_transcript "OTTMUST00000119420.1";
mm10-chrY	HAVANA	exon	62802222	62802915	.	-	.	gene_id "ENSMUSG00000101882.1"; transcript_id "ENSMUST00000188878.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29545"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29545-201"; exon_number 1; exon_id "ENSMUSE00001327013.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045566.1"; havana_transcript "OTTMUST00000119420.1";
mm10-chrY	HAVANA	gene	62839197	62839509	.	-	.	gene_id "ENSMUSG00000099585.1"; gene_type "processed_pseudogene"; gene_name "Gm29544"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045567.1";
mm10-chrY	HAVANA	transcript	62839197	62839509	.	-	.	gene_id "ENSMUSG00000099585.1"; transcript_id "ENSMUST00000188860.1"; gene_type "processed_pseudogene"; gene_name "Gm29544"; transcript_type "processed_pseudogene"; transcript_name "Gm29544-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045567.1"; havana_transcript "OTTMUST00000119421.1";
mm10-chrY	HAVANA	exon	62839197	62839509	.	-	.	gene_id "ENSMUSG00000099585.1"; transcript_id "ENSMUST00000188860.1"; gene_type "processed_pseudogene"; gene_name "Gm29544"; transcript_type "processed_pseudogene"; transcript_name "Gm29544-201"; exon_number 1; exon_id "ENSMUSE00001327959.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045567.1"; havana_transcript "OTTMUST00000119421.1";
mm10-chrY	HAVANA	gene	62874899	62885362	.	-	.	gene_id "ENSMUSG00000101182.1"; gene_type "lincRNA"; gene_name "Gm29209"; level 2; havana_gene "OTTMUSG00000045568.1";
mm10-chrY	HAVANA	transcript	62874899	62885362	.	-	.	gene_id "ENSMUSG00000101182.1"; transcript_id "ENSMUST00000188176.1"; gene_type "lincRNA"; gene_name "Gm29209"; transcript_type "lincRNA"; transcript_name "Gm29209-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045568.1"; havana_transcript "OTTMUST00000119422.1";
mm10-chrY	HAVANA	exon	62885303	62885362	.	-	.	gene_id "ENSMUSG00000101182.1"; transcript_id "ENSMUST00000188176.1"; gene_type "lincRNA"; gene_name "Gm29209"; transcript_type "lincRNA"; transcript_name "Gm29209-201"; exon_number 1; exon_id "ENSMUSE00001321903.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045568.1"; havana_transcript "OTTMUST00000119422.1";
mm10-chrY	HAVANA	exon	62881572	62881713	.	-	.	gene_id "ENSMUSG00000101182.1"; transcript_id "ENSMUST00000188176.1"; gene_type "lincRNA"; gene_name "Gm29209"; transcript_type "lincRNA"; transcript_name "Gm29209-201"; exon_number 2; exon_id "ENSMUSE00001326870.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045568.1"; havana_transcript "OTTMUST00000119422.1";
mm10-chrY	HAVANA	exon	62876459	62876550	.	-	.	gene_id "ENSMUSG00000101182.1"; transcript_id "ENSMUST00000188176.1"; gene_type "lincRNA"; gene_name "Gm29209"; transcript_type "lincRNA"; transcript_name "Gm29209-201"; exon_number 3; exon_id "ENSMUSE00001328890.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045568.1"; havana_transcript "OTTMUST00000119422.1";
mm10-chrY	HAVANA	exon	62874899	62875061	.	-	.	gene_id "ENSMUSG00000101182.1"; transcript_id "ENSMUST00000188176.1"; gene_type "lincRNA"; gene_name "Gm29209"; transcript_type "lincRNA"; transcript_name "Gm29209-201"; exon_number 4; exon_id "ENSMUSE00001321444.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045568.1"; havana_transcript "OTTMUST00000119422.1";
mm10-chrY	HAVANA	gene	62878705	62881941	.	+	.	gene_id "ENSMUSG00000101668.1"; gene_type "lincRNA"; gene_name "Gm29549"; level 2; havana_gene "OTTMUSG00000045569.1";
mm10-chrY	HAVANA	transcript	62878705	62881941	.	+	.	gene_id "ENSMUSG00000101668.1"; transcript_id "ENSMUST00000189569.1"; gene_type "lincRNA"; gene_name "Gm29549"; transcript_type "lincRNA"; transcript_name "Gm29549-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045569.1"; havana_transcript "OTTMUST00000119423.1";
mm10-chrY	HAVANA	exon	62878705	62879342	.	+	.	gene_id "ENSMUSG00000101668.1"; transcript_id "ENSMUST00000189569.1"; gene_type "lincRNA"; gene_name "Gm29549"; transcript_type "lincRNA"; transcript_name "Gm29549-202"; exon_number 1; exon_id "ENSMUSE00001323904.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045569.1"; havana_transcript "OTTMUST00000119423.1";
mm10-chrY	HAVANA	exon	62879828	62880013	.	+	.	gene_id "ENSMUSG00000101668.1"; transcript_id "ENSMUST00000189569.1"; gene_type "lincRNA"; gene_name "Gm29549"; transcript_type "lincRNA"; transcript_name "Gm29549-202"; exon_number 2; exon_id "ENSMUSE00001324430.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045569.1"; havana_transcript "OTTMUST00000119423.1";
mm10-chrY	HAVANA	exon	62880743	62880926	.	+	.	gene_id "ENSMUSG00000101668.1"; transcript_id "ENSMUST00000189569.1"; gene_type "lincRNA"; gene_name "Gm29549"; transcript_type "lincRNA"; transcript_name "Gm29549-202"; exon_number 3; exon_id "ENSMUSE00001330912.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045569.1"; havana_transcript "OTTMUST00000119423.1";
mm10-chrY	HAVANA	exon	62881453	62881941	.	+	.	gene_id "ENSMUSG00000101668.1"; transcript_id "ENSMUST00000189569.1"; gene_type "lincRNA"; gene_name "Gm29549"; transcript_type "lincRNA"; transcript_name "Gm29549-202"; exon_number 4; exon_id "ENSMUSE00001331350.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045569.1"; havana_transcript "OTTMUST00000119423.1";
mm10-chrY	HAVANA	transcript	62879157	62881521	.	+	.	gene_id "ENSMUSG00000101668.1"; transcript_id "ENSMUST00000188732.1"; gene_type "lincRNA"; gene_name "Gm29549"; transcript_type "lincRNA"; transcript_name "Gm29549-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045569.1"; havana_transcript "OTTMUST00000119424.1";
mm10-chrY	HAVANA	exon	62879157	62879342	.	+	.	gene_id "ENSMUSG00000101668.1"; transcript_id "ENSMUST00000188732.1"; gene_type "lincRNA"; gene_name "Gm29549"; transcript_type "lincRNA"; transcript_name "Gm29549-201"; exon_number 1; exon_id "ENSMUSE00001332265.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045569.1"; havana_transcript "OTTMUST00000119424.1";
mm10-chrY	HAVANA	exon	62879832	62880013	.	+	.	gene_id "ENSMUSG00000101668.1"; transcript_id "ENSMUST00000188732.1"; gene_type "lincRNA"; gene_name "Gm29549"; transcript_type "lincRNA"; transcript_name "Gm29549-201"; exon_number 2; exon_id "ENSMUSE00001328370.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045569.1"; havana_transcript "OTTMUST00000119424.1";
mm10-chrY	HAVANA	exon	62881453	62881521	.	+	.	gene_id "ENSMUSG00000101668.1"; transcript_id "ENSMUST00000188732.1"; gene_type "lincRNA"; gene_name "Gm29549"; transcript_type "lincRNA"; transcript_name "Gm29549-201"; exon_number 3; exon_id "ENSMUSE00001325377.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045569.1"; havana_transcript "OTTMUST00000119424.1";
mm10-chrY	HAVANA	gene	62980472	62981165	.	-	.	gene_id "ENSMUSG00000101998.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21530"; level 2; havana_gene "OTTMUSG00000045573.1";
mm10-chrY	HAVANA	transcript	62980472	62981165	.	-	.	gene_id "ENSMUSG00000101998.1"; transcript_id "ENSMUST00000190506.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21530"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21530-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045573.1"; havana_transcript "OTTMUST00000119445.1";
mm10-chrY	HAVANA	exon	62980472	62981165	.	-	.	gene_id "ENSMUSG00000101998.1"; transcript_id "ENSMUST00000190506.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21530"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21530-201"; exon_number 1; exon_id "ENSMUSE00001332546.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045573.1"; havana_transcript "OTTMUST00000119445.1";
mm10-chrY	HAVANA	gene	63055181	63055871	.	-	.	gene_id "ENSMUSG00000099975.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21617"; level 2; havana_gene "OTTMUSG00000045574.1";
mm10-chrY	HAVANA	transcript	63055181	63055871	.	-	.	gene_id "ENSMUSG00000099975.1"; transcript_id "ENSMUST00000188297.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21617"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm21617-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045574.1"; havana_transcript "OTTMUST00000119446.1";
mm10-chrY	HAVANA	exon	63055181	63055871	.	-	.	gene_id "ENSMUSG00000099975.1"; transcript_id "ENSMUST00000188297.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm21617"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm21617-201"; exon_number 1; exon_id "ENSMUSE00001322513.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "basic"; havana_gene "OTTMUSG00000045574.1"; havana_transcript "OTTMUST00000119446.1";
mm10-chrY	HAVANA	gene	63084819	63085433	.	-	.	gene_id "ENSMUSG00000099783.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28589"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045575.1";
mm10-chrY	HAVANA	transcript	63084819	63085433	.	-	.	gene_id "ENSMUSG00000099783.1"; transcript_id "ENSMUST00000186991.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28589"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28589-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045575.1"; havana_transcript "OTTMUST00000119447.1";
mm10-chrY	HAVANA	exon	63084819	63085433	.	-	.	gene_id "ENSMUSG00000099783.1"; transcript_id "ENSMUST00000186991.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28589"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28589-201"; exon_number 1; exon_id "ENSMUSE00001327615.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045575.1"; havana_transcript "OTTMUST00000119447.1";
mm10-chrY	HAVANA	gene	63121523	63122216	.	-	.	gene_id "ENSMUSG00000101390.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29420"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045576.1";
mm10-chrY	HAVANA	transcript	63121523	63122216	.	-	.	gene_id "ENSMUSG00000101390.1"; transcript_id "ENSMUST00000187261.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29420"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29420-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045576.1"; havana_transcript "OTTMUST00000119448.1";
mm10-chrY	HAVANA	exon	63121523	63122216	.	-	.	gene_id "ENSMUSG00000101390.1"; transcript_id "ENSMUST00000187261.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29420"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29420-201"; exon_number 1; exon_id "ENSMUSE00001317993.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045576.1"; havana_transcript "OTTMUST00000119448.1";
mm10-chrY	HAVANA	gene	63164534	63167772	.	+	.	gene_id "ENSMUSG00000099699.1"; gene_type "lincRNA"; gene_name "Gm29421"; level 2; havana_gene "OTTMUSG00000045577.1";
mm10-chrY	HAVANA	transcript	63164534	63167772	.	+	.	gene_id "ENSMUSG00000099699.1"; transcript_id "ENSMUST00000185843.1"; gene_type "lincRNA"; gene_name "Gm29421"; transcript_type "lincRNA"; transcript_name "Gm29421-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045577.1"; havana_transcript "OTTMUST00000119449.1";
mm10-chrY	HAVANA	exon	63164534	63165172	.	+	.	gene_id "ENSMUSG00000099699.1"; transcript_id "ENSMUST00000185843.1"; gene_type "lincRNA"; gene_name "Gm29421"; transcript_type "lincRNA"; transcript_name "Gm29421-201"; exon_number 1; exon_id "ENSMUSE00001334253.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045577.1"; havana_transcript "OTTMUST00000119449.1";
mm10-chrY	HAVANA	exon	63165658	63165843	.	+	.	gene_id "ENSMUSG00000099699.1"; transcript_id "ENSMUST00000185843.1"; gene_type "lincRNA"; gene_name "Gm29421"; transcript_type "lincRNA"; transcript_name "Gm29421-201"; exon_number 2; exon_id "ENSMUSE00001319226.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045577.1"; havana_transcript "OTTMUST00000119449.1";
mm10-chrY	HAVANA	exon	63166573	63166756	.	+	.	gene_id "ENSMUSG00000099699.1"; transcript_id "ENSMUST00000185843.1"; gene_type "lincRNA"; gene_name "Gm29421"; transcript_type "lincRNA"; transcript_name "Gm29421-201"; exon_number 3; exon_id "ENSMUSE00001330761.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045577.1"; havana_transcript "OTTMUST00000119449.1";
mm10-chrY	HAVANA	exon	63167284	63167772	.	+	.	gene_id "ENSMUSG00000099699.1"; transcript_id "ENSMUST00000185843.1"; gene_type "lincRNA"; gene_name "Gm29421"; transcript_type "lincRNA"; transcript_name "Gm29421-201"; exon_number 4; exon_id "ENSMUSE00001320275.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045577.1"; havana_transcript "OTTMUST00000119449.1";
mm10-chrY	HAVANA	transcript	63164986	63167352	.	+	.	gene_id "ENSMUSG00000099699.1"; transcript_id "ENSMUST00000189077.1"; gene_type "lincRNA"; gene_name "Gm29421"; transcript_type "lincRNA"; transcript_name "Gm29421-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045577.1"; havana_transcript "OTTMUST00000119450.1";
mm10-chrY	HAVANA	exon	63164986	63165172	.	+	.	gene_id "ENSMUSG00000099699.1"; transcript_id "ENSMUST00000189077.1"; gene_type "lincRNA"; gene_name "Gm29421"; transcript_type "lincRNA"; transcript_name "Gm29421-202"; exon_number 1; exon_id "ENSMUSE00001333102.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045577.1"; havana_transcript "OTTMUST00000119450.1";
mm10-chrY	HAVANA	exon	63165662	63165843	.	+	.	gene_id "ENSMUSG00000099699.1"; transcript_id "ENSMUST00000189077.1"; gene_type "lincRNA"; gene_name "Gm29421"; transcript_type "lincRNA"; transcript_name "Gm29421-202"; exon_number 2; exon_id "ENSMUSE00001328272.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045577.1"; havana_transcript "OTTMUST00000119450.1";
mm10-chrY	HAVANA	exon	63167284	63167352	.	+	.	gene_id "ENSMUSG00000099699.1"; transcript_id "ENSMUST00000189077.1"; gene_type "lincRNA"; gene_name "Gm29421"; transcript_type "lincRNA"; transcript_name "Gm29421-202"; exon_number 3; exon_id "ENSMUSE00001326476.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045577.1"; havana_transcript "OTTMUST00000119450.1";
mm10-chrY	HAVANA	gene	63228427	63254644	.	+	.	gene_id "ENSMUSG00000100856.1"; gene_type "protein_coding"; gene_name "Gm21627"; level 2; havana_gene "OTTMUSG00000045578.1";
mm10-chrY	HAVANA	transcript	63228427	63254644	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	exon	63228427	63228470	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 1; exon_id "ENSMUSE00001335849.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	exon	63229837	63229968	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 2; exon_id "ENSMUSE00001321144.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	CDS	63229860	63229968	.	+	0	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 2; exon_id "ENSMUSE00001321144.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	start_codon	63229860	63229862	.	+	0	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 2; exon_id "ENSMUSE00001321144.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	exon	63235303	63235369	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 3; exon_id "ENSMUSE00001331873.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	CDS	63235303	63235369	.	+	2	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 3; exon_id "ENSMUSE00001331873.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	exon	63236054	63236088	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 4; exon_id "ENSMUSE00001322691.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	CDS	63236054	63236088	.	+	1	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 4; exon_id "ENSMUSE00001322691.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	exon	63243099	63243165	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 5; exon_id "ENSMUSE00001335701.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	CDS	63243099	63243165	.	+	2	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 5; exon_id "ENSMUSE00001335701.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	exon	63243742	63243776	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 6; exon_id "ENSMUSE00001321959.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	CDS	63243742	63243776	.	+	1	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 6; exon_id "ENSMUSE00001321959.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	exon	63250940	63251057	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 7; exon_id "ENSMUSE00001334066.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	CDS	63250940	63251057	.	+	2	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 7; exon_id "ENSMUSE00001334066.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	exon	63251836	63251935	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 8; exon_id "ENSMUSE00001320270.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	CDS	63251836	63251935	.	+	1	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 8; exon_id "ENSMUSE00001320270.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	exon	63253966	63254064	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 9; exon_id "ENSMUSE00001323351.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	CDS	63253966	63254064	.	+	0	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 9; exon_id "ENSMUSE00001323351.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	exon	63254424	63254644	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 10; exon_id "ENSMUSE00000989532.2"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	CDS	63254424	63254450	.	+	0	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 10; exon_id "ENSMUSE00000989532.2"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	stop_codon	63254451	63254453	.	+	0	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 10; exon_id "ENSMUSE00000989532.2"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	UTR	63228427	63228470	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 1; exon_id "ENSMUSE00001335849.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	UTR	63229837	63229859	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 2; exon_id "ENSMUSE00001321144.1"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	UTR	63254451	63254644	.	+	.	gene_id "ENSMUSG00000100856.1"; transcript_id "ENSMUST00000187768.1"; gene_type "protein_coding"; gene_name "Gm21627"; transcript_type "protein_coding"; transcript_name "Gm21627-201"; exon_number 10; exon_id "ENSMUSE00000989532.2"; level 2; protein_id "ENSMUSP00000140851.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045578.1"; havana_transcript "OTTMUST00000119451.1";
mm10-chrY	HAVANA	gene	63316283	63316976	.	-	.	gene_id "ENSMUSG00000101544.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29422"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045579.1";
mm10-chrY	HAVANA	transcript	63316283	63316976	.	-	.	gene_id "ENSMUSG00000101544.1"; transcript_id "ENSMUST00000188062.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29422"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29422-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045579.1"; havana_transcript "OTTMUST00000119452.1";
mm10-chrY	HAVANA	exon	63316283	63316976	.	-	.	gene_id "ENSMUSG00000101544.1"; transcript_id "ENSMUST00000188062.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29422"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29422-201"; exon_number 1; exon_id "ENSMUSE00001331980.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045579.1"; havana_transcript "OTTMUST00000119452.1";
mm10-chrY	HAVANA	gene	63353282	63353594	.	-	.	gene_id "ENSMUSG00000100159.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28808"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045580.1";
mm10-chrY	HAVANA	transcript	63353282	63353594	.	-	.	gene_id "ENSMUSG00000100159.1"; transcript_id "ENSMUST00000190978.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28808"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28808-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045580.1"; havana_transcript "OTTMUST00000119453.1";
mm10-chrY	HAVANA	exon	63353282	63353594	.	-	.	gene_id "ENSMUSG00000100159.1"; transcript_id "ENSMUST00000190978.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28808"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28808-201"; exon_number 1; exon_id "ENSMUSE00001327445.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045580.1"; havana_transcript "OTTMUST00000119453.1";
mm10-chrY	HAVANA	gene	63500905	63501598	.	-	.	gene_id "ENSMUSG00000101864.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21634"; level 2; havana_gene "OTTMUSG00000045581.1";
mm10-chrY	HAVANA	transcript	63500905	63501598	.	-	.	gene_id "ENSMUSG00000101864.1"; transcript_id "ENSMUST00000190775.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21634"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21634-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045581.1"; havana_transcript "OTTMUST00000119454.1";
mm10-chrY	HAVANA	exon	63500905	63501598	.	-	.	gene_id "ENSMUSG00000101864.1"; transcript_id "ENSMUST00000190775.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21634"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21634-201"; exon_number 1; exon_id "ENSMUSE00001332276.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045581.1"; havana_transcript "OTTMUST00000119454.1";
mm10-chrY	HAVANA	gene	63642375	63643068	.	-	.	gene_id "ENSMUSG00000100712.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28446"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045709.1";
mm10-chrY	HAVANA	transcript	63642375	63643068	.	-	.	gene_id "ENSMUSG00000100712.1"; transcript_id "ENSMUST00000186508.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28446"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28446-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045709.1"; havana_transcript "OTTMUST00000119624.1";
mm10-chrY	HAVANA	exon	63642375	63643068	.	-	.	gene_id "ENSMUSG00000100712.1"; transcript_id "ENSMUST00000186508.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28446"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28446-201"; exon_number 1; exon_id "ENSMUSE00001321524.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045709.1"; havana_transcript "OTTMUST00000119624.1";
mm10-chrY	HAVANA	gene	63680536	63691008	.	-	.	gene_id "ENSMUSG00000101119.1"; gene_type "lincRNA"; gene_name "Gm29060"; level 2; havana_gene "OTTMUSG00000045710.1";
mm10-chrY	HAVANA	transcript	63680536	63691008	.	-	.	gene_id "ENSMUSG00000101119.1"; transcript_id "ENSMUST00000185339.1"; gene_type "lincRNA"; gene_name "Gm29060"; transcript_type "lincRNA"; transcript_name "Gm29060-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045710.1"; havana_transcript "OTTMUST00000119625.1";
mm10-chrY	HAVANA	exon	63690949	63691008	.	-	.	gene_id "ENSMUSG00000101119.1"; transcript_id "ENSMUST00000185339.1"; gene_type "lincRNA"; gene_name "Gm29060"; transcript_type "lincRNA"; transcript_name "Gm29060-201"; exon_number 1; exon_id "ENSMUSE00001328558.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045710.1"; havana_transcript "OTTMUST00000119625.1";
mm10-chrY	HAVANA	exon	63687213	63687354	.	-	.	gene_id "ENSMUSG00000101119.1"; transcript_id "ENSMUST00000185339.1"; gene_type "lincRNA"; gene_name "Gm29060"; transcript_type "lincRNA"; transcript_name "Gm29060-201"; exon_number 2; exon_id "ENSMUSE00001327157.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045710.1"; havana_transcript "OTTMUST00000119625.1";
mm10-chrY	HAVANA	exon	63682116	63682207	.	-	.	gene_id "ENSMUSG00000101119.1"; transcript_id "ENSMUST00000185339.1"; gene_type "lincRNA"; gene_name "Gm29060"; transcript_type "lincRNA"; transcript_name "Gm29060-201"; exon_number 3; exon_id "ENSMUSE00001323373.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045710.1"; havana_transcript "OTTMUST00000119625.1";
mm10-chrY	HAVANA	exon	63680536	63680698	.	-	.	gene_id "ENSMUSG00000101119.1"; transcript_id "ENSMUST00000185339.1"; gene_type "lincRNA"; gene_name "Gm29060"; transcript_type "lincRNA"; transcript_name "Gm29060-201"; exon_number 4; exon_id "ENSMUSE00001319770.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045710.1"; havana_transcript "OTTMUST00000119625.1";
mm10-chrY	HAVANA	gene	63684343	63687582	.	+	.	gene_id "ENSMUSG00000099520.1"; gene_type "lincRNA"; gene_name "Gm29061"; level 2; havana_gene "OTTMUSG00000045711.1";
mm10-chrY	HAVANA	transcript	63684343	63687582	.	+	.	gene_id "ENSMUSG00000099520.1"; transcript_id "ENSMUST00000185900.1"; gene_type "lincRNA"; gene_name "Gm29061"; transcript_type "lincRNA"; transcript_name "Gm29061-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045711.1"; havana_transcript "OTTMUST00000119626.1";
mm10-chrY	HAVANA	exon	63684343	63684982	.	+	.	gene_id "ENSMUSG00000099520.1"; transcript_id "ENSMUST00000185900.1"; gene_type "lincRNA"; gene_name "Gm29061"; transcript_type "lincRNA"; transcript_name "Gm29061-201"; exon_number 1; exon_id "ENSMUSE00001335089.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045711.1"; havana_transcript "OTTMUST00000119626.1";
mm10-chrY	HAVANA	exon	63685468	63685653	.	+	.	gene_id "ENSMUSG00000099520.1"; transcript_id "ENSMUST00000185900.1"; gene_type "lincRNA"; gene_name "Gm29061"; transcript_type "lincRNA"; transcript_name "Gm29061-201"; exon_number 2; exon_id "ENSMUSE00001329520.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045711.1"; havana_transcript "OTTMUST00000119626.1";
mm10-chrY	HAVANA	exon	63686383	63686566	.	+	.	gene_id "ENSMUSG00000099520.1"; transcript_id "ENSMUST00000185900.1"; gene_type "lincRNA"; gene_name "Gm29061"; transcript_type "lincRNA"; transcript_name "Gm29061-201"; exon_number 3; exon_id "ENSMUSE00001334179.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045711.1"; havana_transcript "OTTMUST00000119626.1";
mm10-chrY	HAVANA	exon	63687094	63687582	.	+	.	gene_id "ENSMUSG00000099520.1"; transcript_id "ENSMUST00000185900.1"; gene_type "lincRNA"; gene_name "Gm29061"; transcript_type "lincRNA"; transcript_name "Gm29061-201"; exon_number 4; exon_id "ENSMUSE00001336039.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045711.1"; havana_transcript "OTTMUST00000119626.1";
mm10-chrY	HAVANA	transcript	63684796	63687162	.	+	.	gene_id "ENSMUSG00000099520.1"; transcript_id "ENSMUST00000187026.1"; gene_type "lincRNA"; gene_name "Gm29061"; transcript_type "lincRNA"; transcript_name "Gm29061-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045711.1"; havana_transcript "OTTMUST00000119627.1";
mm10-chrY	HAVANA	exon	63684796	63684982	.	+	.	gene_id "ENSMUSG00000099520.1"; transcript_id "ENSMUST00000187026.1"; gene_type "lincRNA"; gene_name "Gm29061"; transcript_type "lincRNA"; transcript_name "Gm29061-202"; exon_number 1; exon_id "ENSMUSE00001318928.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045711.1"; havana_transcript "OTTMUST00000119627.1";
mm10-chrY	HAVANA	exon	63685472	63685653	.	+	.	gene_id "ENSMUSG00000099520.1"; transcript_id "ENSMUST00000187026.1"; gene_type "lincRNA"; gene_name "Gm29061"; transcript_type "lincRNA"; transcript_name "Gm29061-202"; exon_number 2; exon_id "ENSMUSE00001330272.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045711.1"; havana_transcript "OTTMUST00000119627.1";
mm10-chrY	HAVANA	exon	63687094	63687162	.	+	.	gene_id "ENSMUSG00000099520.1"; transcript_id "ENSMUST00000187026.1"; gene_type "lincRNA"; gene_name "Gm29061"; transcript_type "lincRNA"; transcript_name "Gm29061-202"; exon_number 3; exon_id "ENSMUSE00001325297.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045711.1"; havana_transcript "OTTMUST00000119627.1";
mm10-chrY	HAVANA	gene	63747931	63772555	.	+	.	gene_id "ENSMUSG00000100520.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20885"; level 2; havana_gene "OTTMUSG00000045712.1";
mm10-chrY	HAVANA	transcript	63747931	63772555	.	+	.	gene_id "ENSMUSG00000100520.1"; transcript_id "ENSMUST00000190192.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20885"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20885-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045712.1"; havana_transcript "OTTMUST00000119628.1";
mm10-chrY	HAVANA	exon	63747931	63748039	.	+	.	gene_id "ENSMUSG00000100520.1"; transcript_id "ENSMUST00000190192.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20885"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20885-201"; exon_number 1; exon_id "ENSMUSE00001318537.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045712.1"; havana_transcript "OTTMUST00000119628.1";
mm10-chrY	HAVANA	exon	63753376	63753442	.	+	.	gene_id "ENSMUSG00000100520.1"; transcript_id "ENSMUST00000190192.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20885"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20885-201"; exon_number 2; exon_id "ENSMUSE00001330124.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045712.1"; havana_transcript "OTTMUST00000119628.1";
mm10-chrY	HAVANA	exon	63754115	63754149	.	+	.	gene_id "ENSMUSG00000100520.1"; transcript_id "ENSMUST00000190192.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20885"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20885-201"; exon_number 3; exon_id "ENSMUSE00001333317.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045712.1"; havana_transcript "OTTMUST00000119628.1";
mm10-chrY	HAVANA	exon	63761174	63761240	.	+	.	gene_id "ENSMUSG00000100520.1"; transcript_id "ENSMUST00000190192.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20885"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20885-201"; exon_number 4; exon_id "ENSMUSE00001319548.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045712.1"; havana_transcript "OTTMUST00000119628.1";
mm10-chrY	HAVANA	exon	63761818	63761852	.	+	.	gene_id "ENSMUSG00000100520.1"; transcript_id "ENSMUST00000190192.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20885"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20885-201"; exon_number 5; exon_id "ENSMUSE00001321482.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045712.1"; havana_transcript "OTTMUST00000119628.1";
mm10-chrY	HAVANA	exon	63769040	63769157	.	+	.	gene_id "ENSMUSG00000100520.1"; transcript_id "ENSMUST00000190192.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20885"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20885-201"; exon_number 6; exon_id "ENSMUSE00001321252.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045712.1"; havana_transcript "OTTMUST00000119628.1";
mm10-chrY	HAVANA	exon	63769928	63770027	.	+	.	gene_id "ENSMUSG00000100520.1"; transcript_id "ENSMUST00000190192.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20885"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20885-201"; exon_number 7; exon_id "ENSMUSE00001324848.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045712.1"; havana_transcript "OTTMUST00000119628.1";
mm10-chrY	HAVANA	exon	63772074	63772172	.	+	.	gene_id "ENSMUSG00000100520.1"; transcript_id "ENSMUST00000190192.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20885"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20885-201"; exon_number 8; exon_id "ENSMUSE00001334600.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045712.1"; havana_transcript "OTTMUST00000119628.1";
mm10-chrY	HAVANA	exon	63772532	63772555	.	+	.	gene_id "ENSMUSG00000100520.1"; transcript_id "ENSMUST00000190192.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20885"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20885-201"; exon_number 9; exon_id "ENSMUSE00001322698.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045712.1"; havana_transcript "OTTMUST00000119628.1";
mm10-chrY	HAVANA	gene	63833904	63834597	.	-	.	gene_id "ENSMUSG00000102107.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29062"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045713.1";
mm10-chrY	HAVANA	transcript	63833904	63834597	.	-	.	gene_id "ENSMUSG00000102107.1"; transcript_id "ENSMUST00000186032.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29062"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29062-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045713.1"; havana_transcript "OTTMUST00000119629.1";
mm10-chrY	HAVANA	exon	63833904	63834597	.	-	.	gene_id "ENSMUSG00000102107.1"; transcript_id "ENSMUST00000186032.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29062"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29062-201"; exon_number 1; exon_id "ENSMUSE00001318829.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045713.1"; havana_transcript "OTTMUST00000119629.1";
mm10-chrY	HAVANA	gene	63870836	63871150	.	-	.	gene_id "ENSMUSG00000101057.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29057"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045714.1";
mm10-chrY	HAVANA	transcript	63870836	63871150	.	-	.	gene_id "ENSMUSG00000101057.1"; transcript_id "ENSMUST00000186468.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29057"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29057-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045714.1"; havana_transcript "OTTMUST00000119630.1";
mm10-chrY	HAVANA	exon	63870836	63871150	.	-	.	gene_id "ENSMUSG00000101057.1"; transcript_id "ENSMUST00000186468.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29057"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29057-201"; exon_number 1; exon_id "ENSMUSE00001320135.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045714.1"; havana_transcript "OTTMUST00000119630.1";
mm10-chrY	HAVANA	gene	63901888	63905126	.	+	.	gene_id "ENSMUSG00000101125.1"; gene_type "lincRNA"; gene_name "Gm29625"; level 2; havana_gene "OTTMUSG00000045723.1";
mm10-chrY	HAVANA	transcript	63901888	63905126	.	+	.	gene_id "ENSMUSG00000101125.1"; transcript_id "ENSMUST00000188079.1"; gene_type "lincRNA"; gene_name "Gm29625"; transcript_type "lincRNA"; transcript_name "Gm29625-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045723.1"; havana_transcript "OTTMUST00000119643.1";
mm10-chrY	HAVANA	exon	63901888	63902527	.	+	.	gene_id "ENSMUSG00000101125.1"; transcript_id "ENSMUST00000188079.1"; gene_type "lincRNA"; gene_name "Gm29625"; transcript_type "lincRNA"; transcript_name "Gm29625-201"; exon_number 1; exon_id "ENSMUSE00001326229.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045723.1"; havana_transcript "OTTMUST00000119643.1";
mm10-chrY	HAVANA	exon	63903013	63903198	.	+	.	gene_id "ENSMUSG00000101125.1"; transcript_id "ENSMUST00000188079.1"; gene_type "lincRNA"; gene_name "Gm29625"; transcript_type "lincRNA"; transcript_name "Gm29625-201"; exon_number 2; exon_id "ENSMUSE00001320916.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045723.1"; havana_transcript "OTTMUST00000119643.1";
mm10-chrY	HAVANA	exon	63903928	63904111	.	+	.	gene_id "ENSMUSG00000101125.1"; transcript_id "ENSMUST00000188079.1"; gene_type "lincRNA"; gene_name "Gm29625"; transcript_type "lincRNA"; transcript_name "Gm29625-201"; exon_number 3; exon_id "ENSMUSE00001329479.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045723.1"; havana_transcript "OTTMUST00000119643.1";
mm10-chrY	HAVANA	exon	63904638	63905126	.	+	.	gene_id "ENSMUSG00000101125.1"; transcript_id "ENSMUST00000188079.1"; gene_type "lincRNA"; gene_name "Gm29625"; transcript_type "lincRNA"; transcript_name "Gm29625-201"; exon_number 4; exon_id "ENSMUSE00001330283.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045723.1"; havana_transcript "OTTMUST00000119643.1";
mm10-chrY	HAVANA	transcript	63902341	63904706	.	+	.	gene_id "ENSMUSG00000101125.1"; transcript_id "ENSMUST00000191394.1"; gene_type "lincRNA"; gene_name "Gm29625"; transcript_type "lincRNA"; transcript_name "Gm29625-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045723.1"; havana_transcript "OTTMUST00000119644.1";
mm10-chrY	HAVANA	exon	63902341	63902527	.	+	.	gene_id "ENSMUSG00000101125.1"; transcript_id "ENSMUST00000191394.1"; gene_type "lincRNA"; gene_name "Gm29625"; transcript_type "lincRNA"; transcript_name "Gm29625-202"; exon_number 1; exon_id "ENSMUSE00001319842.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045723.1"; havana_transcript "OTTMUST00000119644.1";
mm10-chrY	HAVANA	exon	63903017	63903198	.	+	.	gene_id "ENSMUSG00000101125.1"; transcript_id "ENSMUST00000191394.1"; gene_type "lincRNA"; gene_name "Gm29625"; transcript_type "lincRNA"; transcript_name "Gm29625-202"; exon_number 2; exon_id "ENSMUSE00001325539.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045723.1"; havana_transcript "OTTMUST00000119644.1";
mm10-chrY	HAVANA	exon	63904638	63904706	.	+	.	gene_id "ENSMUSG00000101125.1"; transcript_id "ENSMUST00000191394.1"; gene_type "lincRNA"; gene_name "Gm29625"; transcript_type "lincRNA"; transcript_name "Gm29625-202"; exon_number 3; exon_id "ENSMUSE00001328667.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045723.1"; havana_transcript "OTTMUST00000119644.1";
mm10-chrY	HAVANA	gene	64012428	64013118	.	-	.	gene_id "ENSMUSG00000101887.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21654"; level 2; havana_gene "OTTMUSG00000045715.1";
mm10-chrY	HAVANA	transcript	64012428	64013118	.	-	.	gene_id "ENSMUSG00000101887.1"; transcript_id "ENSMUST00000188086.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21654"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21654-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045715.1"; havana_transcript "OTTMUST00000119631.1";
mm10-chrY	HAVANA	exon	64012428	64013118	.	-	.	gene_id "ENSMUSG00000101887.1"; transcript_id "ENSMUST00000188086.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21654"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21654-201"; exon_number 1; exon_id "ENSMUSE00001320165.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045715.1"; havana_transcript "OTTMUST00000119631.1";
mm10-chrY	HAVANA	gene	64042912	64043526	.	-	.	gene_id "ENSMUSG00000100521.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29058"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045716.1";
mm10-chrY	HAVANA	transcript	64042912	64043526	.	-	.	gene_id "ENSMUSG00000100521.1"; transcript_id "ENSMUST00000189510.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29058"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29058-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045716.1"; havana_transcript "OTTMUST00000119632.1";
mm10-chrY	HAVANA	exon	64042912	64043526	.	-	.	gene_id "ENSMUSG00000100521.1"; transcript_id "ENSMUST00000189510.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29058"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29058-201"; exon_number 1; exon_id "ENSMUSE00001328624.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045716.1"; havana_transcript "OTTMUST00000119632.1";
mm10-chrY	HAVANA	gene	64079628	64079942	.	-	.	gene_id "ENSMUSG00000101790.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29059"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045717.1";
mm10-chrY	HAVANA	transcript	64079628	64079942	.	-	.	gene_id "ENSMUSG00000101790.1"; transcript_id "ENSMUST00000191534.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29059"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29059-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045717.1"; havana_transcript "OTTMUST00000119633.1";
mm10-chrY	HAVANA	exon	64079628	64079942	.	-	.	gene_id "ENSMUSG00000101790.1"; transcript_id "ENSMUST00000191534.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29059"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29059-201"; exon_number 1; exon_id "ENSMUSE00001326326.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045717.1"; havana_transcript "OTTMUST00000119633.1";
mm10-chrY	HAVANA	gene	64116692	64119931	.	+	.	gene_id "ENSMUSG00000100452.1"; gene_type "lincRNA"; gene_name "Gm29628"; level 2; havana_gene "OTTMUSG00000045724.1";
mm10-chrY	HAVANA	transcript	64116692	64119931	.	+	.	gene_id "ENSMUSG00000100452.1"; transcript_id "ENSMUST00000187206.1"; gene_type "lincRNA"; gene_name "Gm29628"; transcript_type "lincRNA"; transcript_name "Gm29628-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045724.1"; havana_transcript "OTTMUST00000119645.1";
mm10-chrY	HAVANA	exon	64116692	64117332	.	+	.	gene_id "ENSMUSG00000100452.1"; transcript_id "ENSMUST00000187206.1"; gene_type "lincRNA"; gene_name "Gm29628"; transcript_type "lincRNA"; transcript_name "Gm29628-201"; exon_number 1; exon_id "ENSMUSE00001331902.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045724.1"; havana_transcript "OTTMUST00000119645.1";
mm10-chrY	HAVANA	exon	64117818	64118003	.	+	.	gene_id "ENSMUSG00000100452.1"; transcript_id "ENSMUST00000187206.1"; gene_type "lincRNA"; gene_name "Gm29628"; transcript_type "lincRNA"; transcript_name "Gm29628-201"; exon_number 2; exon_id "ENSMUSE00001327961.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045724.1"; havana_transcript "OTTMUST00000119645.1";
mm10-chrY	HAVANA	exon	64118733	64118916	.	+	.	gene_id "ENSMUSG00000100452.1"; transcript_id "ENSMUST00000187206.1"; gene_type "lincRNA"; gene_name "Gm29628"; transcript_type "lincRNA"; transcript_name "Gm29628-201"; exon_number 3; exon_id "ENSMUSE00001320329.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045724.1"; havana_transcript "OTTMUST00000119645.1";
mm10-chrY	HAVANA	exon	64119443	64119931	.	+	.	gene_id "ENSMUSG00000100452.1"; transcript_id "ENSMUST00000187206.1"; gene_type "lincRNA"; gene_name "Gm29628"; transcript_type "lincRNA"; transcript_name "Gm29628-201"; exon_number 4; exon_id "ENSMUSE00001322966.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045724.1"; havana_transcript "OTTMUST00000119645.1";
mm10-chrY	HAVANA	transcript	64117147	64119511	.	+	.	gene_id "ENSMUSG00000100452.1"; transcript_id "ENSMUST00000190214.1"; gene_type "lincRNA"; gene_name "Gm29628"; transcript_type "lincRNA"; transcript_name "Gm29628-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045724.1"; havana_transcript "OTTMUST00000119646.1";
mm10-chrY	HAVANA	exon	64117147	64117332	.	+	.	gene_id "ENSMUSG00000100452.1"; transcript_id "ENSMUST00000190214.1"; gene_type "lincRNA"; gene_name "Gm29628"; transcript_type "lincRNA"; transcript_name "Gm29628-202"; exon_number 1; exon_id "ENSMUSE00001320002.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045724.1"; havana_transcript "OTTMUST00000119646.1";
mm10-chrY	HAVANA	exon	64117822	64118003	.	+	.	gene_id "ENSMUSG00000100452.1"; transcript_id "ENSMUST00000190214.1"; gene_type "lincRNA"; gene_name "Gm29628"; transcript_type "lincRNA"; transcript_name "Gm29628-202"; exon_number 2; exon_id "ENSMUSE00001320382.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045724.1"; havana_transcript "OTTMUST00000119646.1";
mm10-chrY	HAVANA	exon	64119443	64119511	.	+	.	gene_id "ENSMUSG00000100452.1"; transcript_id "ENSMUST00000190214.1"; gene_type "lincRNA"; gene_name "Gm29628"; transcript_type "lincRNA"; transcript_name "Gm29628-202"; exon_number 3; exon_id "ENSMUSE00001320890.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045724.1"; havana_transcript "OTTMUST00000119646.1";
mm10-chrY	HAVANA	gene	64227060	64227755	.	-	.	gene_id "ENSMUSG00000101403.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20882"; level 2; havana_gene "OTTMUSG00000045718.1";
mm10-chrY	HAVANA	transcript	64227060	64227755	.	-	.	gene_id "ENSMUSG00000101403.1"; transcript_id "ENSMUST00000191028.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20882"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20882-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045718.1"; havana_transcript "OTTMUST00000119634.1";
mm10-chrY	HAVANA	exon	64227060	64227755	.	-	.	gene_id "ENSMUSG00000101403.1"; transcript_id "ENSMUST00000191028.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20882"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20882-201"; exon_number 1; exon_id "ENSMUSE00001325682.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045718.1"; havana_transcript "OTTMUST00000119634.1";
mm10-chrY	HAVANA	gene	64301906	64302598	.	-	.	gene_id "ENSMUSG00000101830.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20907"; level 2; havana_gene "OTTMUSG00000045719.1";
mm10-chrY	HAVANA	transcript	64301906	64302598	.	-	.	gene_id "ENSMUSG00000101830.1"; transcript_id "ENSMUST00000185201.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20907"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20907-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045719.1"; havana_transcript "OTTMUST00000119635.1";
mm10-chrY	HAVANA	exon	64301906	64302598	.	-	.	gene_id "ENSMUSG00000101830.1"; transcript_id "ENSMUST00000185201.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20907"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20907-201"; exon_number 1; exon_id "ENSMUSE00001318801.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045719.1"; havana_transcript "OTTMUST00000119635.1";
mm10-chrY	HAVANA	gene	64323591	64333679	.	-	.	gene_id "ENSMUSG00000100322.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045720.1";
mm10-chrY	HAVANA	transcript	64323591	64333679	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000190185.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119636.1";
mm10-chrY	HAVANA	exon	64333544	64333679	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000190185.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-202"; exon_number 1; exon_id "ENSMUSE00001325665.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119636.1";
mm10-chrY	HAVANA	exon	64331561	64331691	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000190185.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-202"; exon_number 2; exon_id "ENSMUSE00001322219.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119636.1";
mm10-chrY	HAVANA	exon	64330859	64331076	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000190185.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-202"; exon_number 3; exon_id "ENSMUSE00001327298.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119636.1";
mm10-chrY	HAVANA	exon	64329980	64330163	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000190185.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-202"; exon_number 4; exon_id "ENSMUSE00001324171.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119636.1";
mm10-chrY	HAVANA	exon	64324186	64324319	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000190185.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-202"; exon_number 5; exon_id "ENSMUSE00001320794.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119636.1";
mm10-chrY	HAVANA	exon	64323591	64323891	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000190185.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-202"; exon_number 6; exon_id "ENSMUSE00001326153.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119636.1";
mm10-chrY	HAVANA	transcript	64329395	64333595	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000191148.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-203"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119637.1";
mm10-chrY	HAVANA	exon	64333544	64333595	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000191148.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-203"; exon_number 1; exon_id "ENSMUSE00001335957.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119637.1";
mm10-chrY	HAVANA	exon	64332002	64332238	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000191148.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-203"; exon_number 2; exon_id "ENSMUSE00001324752.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119637.1";
mm10-chrY	HAVANA	exon	64329980	64330163	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000191148.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-203"; exon_number 3; exon_id "ENSMUSE00001324171.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119637.1";
mm10-chrY	HAVANA	exon	64329395	64329464	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000191148.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "processed_transcript"; transcript_name "Gm29624-203"; exon_number 4; exon_id "ENSMUSE00001328929.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119637.1";
mm10-chrY	HAVANA	transcript	64331481	64332095	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000190018.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29624-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119638.1";
mm10-chrY	HAVANA	exon	64331481	64332095	.	-	.	gene_id "ENSMUSG00000100322.6"; transcript_id "ENSMUST00000190018.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29624"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29624-201"; exon_number 1; exon_id "ENSMUSE00001321451.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045720.1"; havana_transcript "OTTMUST00000119638.1";
mm10-chrY	HAVANA	gene	64368159	64368854	.	-	.	gene_id "ENSMUSG00000099350.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29623"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045728.1";
mm10-chrY	HAVANA	transcript	64368159	64368854	.	-	.	gene_id "ENSMUSG00000099350.1"; transcript_id "ENSMUST00000188316.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29623"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29623-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045728.1"; havana_transcript "OTTMUST00000119651.1";
mm10-chrY	HAVANA	exon	64368159	64368854	.	-	.	gene_id "ENSMUSG00000099350.1"; transcript_id "ENSMUST00000188316.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29623"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29623-201"; exon_number 1; exon_id "ENSMUSE00001335493.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045728.1"; havana_transcript "OTTMUST00000119651.1";
mm10-chrY	HAVANA	gene	64374713	64378051	.	-	.	gene_id "ENSMUSG00000100329.1"; gene_type "lincRNA"; gene_name "Gm29622"; level 2; havana_gene "OTTMUSG00000045729.1";
mm10-chrY	HAVANA	transcript	64374713	64378051	.	-	.	gene_id "ENSMUSG00000100329.1"; transcript_id "ENSMUST00000190914.1"; gene_type "lincRNA"; gene_name "Gm29622"; transcript_type "lincRNA"; transcript_name "Gm29622-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045729.1"; havana_transcript "OTTMUST00000119652.1";
mm10-chrY	HAVANA	exon	64377829	64378051	.	-	.	gene_id "ENSMUSG00000100329.1"; transcript_id "ENSMUST00000190914.1"; gene_type "lincRNA"; gene_name "Gm29622"; transcript_type "lincRNA"; transcript_name "Gm29622-201"; exon_number 1; exon_id "ENSMUSE00001326121.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045729.1"; havana_transcript "OTTMUST00000119652.1";
mm10-chrY	HAVANA	exon	64374713	64376654	.	-	.	gene_id "ENSMUSG00000100329.1"; transcript_id "ENSMUST00000190914.1"; gene_type "lincRNA"; gene_name "Gm29622"; transcript_type "lincRNA"; transcript_name "Gm29622-201"; exon_number 2; exon_id "ENSMUSE00001324018.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045729.1"; havana_transcript "OTTMUST00000119652.1";
mm10-chrY	HAVANA	gene	64411147	64414386	.	+	.	gene_id "ENSMUSG00000099940.1"; gene_type "lincRNA"; gene_name "Gm29265"; level 2; havana_gene "OTTMUSG00000045730.1";
mm10-chrY	HAVANA	transcript	64411147	64414386	.	+	.	gene_id "ENSMUSG00000099940.1"; transcript_id "ENSMUST00000188697.1"; gene_type "lincRNA"; gene_name "Gm29265"; transcript_type "lincRNA"; transcript_name "Gm29265-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045730.1"; havana_transcript "OTTMUST00000119653.1";
mm10-chrY	HAVANA	exon	64411147	64411786	.	+	.	gene_id "ENSMUSG00000099940.1"; transcript_id "ENSMUST00000188697.1"; gene_type "lincRNA"; gene_name "Gm29265"; transcript_type "lincRNA"; transcript_name "Gm29265-201"; exon_number 1; exon_id "ENSMUSE00001318934.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045730.1"; havana_transcript "OTTMUST00000119653.1";
mm10-chrY	HAVANA	exon	64412272	64412457	.	+	.	gene_id "ENSMUSG00000099940.1"; transcript_id "ENSMUST00000188697.1"; gene_type "lincRNA"; gene_name "Gm29265"; transcript_type "lincRNA"; transcript_name "Gm29265-201"; exon_number 2; exon_id "ENSMUSE00001324657.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045730.1"; havana_transcript "OTTMUST00000119653.1";
mm10-chrY	HAVANA	exon	64413187	64413370	.	+	.	gene_id "ENSMUSG00000099940.1"; transcript_id "ENSMUST00000188697.1"; gene_type "lincRNA"; gene_name "Gm29265"; transcript_type "lincRNA"; transcript_name "Gm29265-201"; exon_number 3; exon_id "ENSMUSE00001318091.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045730.1"; havana_transcript "OTTMUST00000119653.1";
mm10-chrY	HAVANA	exon	64413898	64414386	.	+	.	gene_id "ENSMUSG00000099940.1"; transcript_id "ENSMUST00000188697.1"; gene_type "lincRNA"; gene_name "Gm29265"; transcript_type "lincRNA"; transcript_name "Gm29265-201"; exon_number 4; exon_id "ENSMUSE00001331159.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045730.1"; havana_transcript "OTTMUST00000119653.1";
mm10-chrY	HAVANA	transcript	64411600	64413966	.	+	.	gene_id "ENSMUSG00000099940.1"; transcript_id "ENSMUST00000190290.1"; gene_type "lincRNA"; gene_name "Gm29265"; transcript_type "lincRNA"; transcript_name "Gm29265-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045730.1"; havana_transcript "OTTMUST00000119654.1";
mm10-chrY	HAVANA	exon	64411600	64411786	.	+	.	gene_id "ENSMUSG00000099940.1"; transcript_id "ENSMUST00000190290.1"; gene_type "lincRNA"; gene_name "Gm29265"; transcript_type "lincRNA"; transcript_name "Gm29265-202"; exon_number 1; exon_id "ENSMUSE00001328347.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045730.1"; havana_transcript "OTTMUST00000119654.1";
mm10-chrY	HAVANA	exon	64412276	64412457	.	+	.	gene_id "ENSMUSG00000099940.1"; transcript_id "ENSMUST00000190290.1"; gene_type "lincRNA"; gene_name "Gm29265"; transcript_type "lincRNA"; transcript_name "Gm29265-202"; exon_number 2; exon_id "ENSMUSE00001334263.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045730.1"; havana_transcript "OTTMUST00000119654.1";
mm10-chrY	HAVANA	exon	64413898	64413966	.	+	.	gene_id "ENSMUSG00000099940.1"; transcript_id "ENSMUST00000190290.1"; gene_type "lincRNA"; gene_name "Gm29265"; transcript_type "lincRNA"; transcript_name "Gm29265-202"; exon_number 3; exon_id "ENSMUSE00001331367.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045730.1"; havana_transcript "OTTMUST00000119654.1";
mm10-chrY	HAVANA	gene	64473266	64499452	.	+	.	gene_id "ENSMUSG00000101766.1"; gene_type "protein_coding"; gene_name "Gm20908"; level 2; havana_gene "OTTMUSG00000045740.1";
mm10-chrY	HAVANA	transcript	64473266	64499452	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	exon	64473266	64473309	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 1; exon_id "ENSMUSE00001331092.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	exon	64474676	64474807	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 2; exon_id "ENSMUSE00001331607.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	CDS	64474690	64474807	.	+	0	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 2; exon_id "ENSMUSE00001331607.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	start_codon	64474690	64474692	.	+	0	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 2; exon_id "ENSMUSE00001331607.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	exon	64480147	64480213	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 3; exon_id "ENSMUSE00001321428.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	CDS	64480147	64480213	.	+	2	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 3; exon_id "ENSMUSE00001321428.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	exon	64480862	64480896	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 4; exon_id "ENSMUSE00001333516.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	CDS	64480862	64480896	.	+	1	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 4; exon_id "ENSMUSE00001333516.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	exon	64487896	64487962	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 5; exon_id "ENSMUSE00001335260.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	CDS	64487896	64487962	.	+	2	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 5; exon_id "ENSMUSE00001335260.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	exon	64488536	64488570	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 6; exon_id "ENSMUSE00001328384.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	CDS	64488536	64488570	.	+	1	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 6; exon_id "ENSMUSE00001328384.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	exon	64495724	64495841	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 7; exon_id "ENSMUSE00001321917.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	CDS	64495724	64495841	.	+	2	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 7; exon_id "ENSMUSE00001321917.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	exon	64496634	64496733	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 8; exon_id "ENSMUSE00001327776.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	CDS	64496634	64496733	.	+	1	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 8; exon_id "ENSMUSE00001327776.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	exon	64498770	64498868	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 9; exon_id "ENSMUSE00001329167.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	CDS	64498770	64498868	.	+	0	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 9; exon_id "ENSMUSE00001329167.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	exon	64499228	64499452	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 10; exon_id "ENSMUSE00001333955.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	CDS	64499228	64499254	.	+	0	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 10; exon_id "ENSMUSE00001333955.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	stop_codon	64499255	64499257	.	+	0	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 10; exon_id "ENSMUSE00001333955.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	UTR	64473266	64473309	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 1; exon_id "ENSMUSE00001331092.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	UTR	64474676	64474689	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 2; exon_id "ENSMUSE00001331607.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	UTR	64499255	64499452	.	+	.	gene_id "ENSMUSG00000101766.1"; transcript_id "ENSMUST00000186004.1"; gene_type "protein_coding"; gene_name "Gm20908"; transcript_type "protein_coding"; transcript_name "Gm20908-201"; exon_number 10; exon_id "ENSMUSE00001333955.1"; level 2; protein_id "ENSMUSP00000140733.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045740.1"; havana_transcript "OTTMUST00000119664.1";
mm10-chrY	HAVANA	gene	64560834	64561527	.	-	.	gene_id "ENSMUSG00000101530.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29259"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045749.1";
mm10-chrY	HAVANA	transcript	64560834	64561527	.	-	.	gene_id "ENSMUSG00000101530.1"; transcript_id "ENSMUST00000186396.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29259"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29259-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045749.1"; havana_transcript "OTTMUST00000119673.1";
mm10-chrY	HAVANA	exon	64560834	64561527	.	-	.	gene_id "ENSMUSG00000101530.1"; transcript_id "ENSMUST00000186396.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29259"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29259-201"; exon_number 1; exon_id "ENSMUSE00001320477.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045749.1"; havana_transcript "OTTMUST00000119673.1";
mm10-chrY	HAVANA	gene	64597860	64598172	.	-	.	gene_id "ENSMUSG00000100676.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28860"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045764.1";
mm10-chrY	HAVANA	transcript	64597860	64598172	.	-	.	gene_id "ENSMUSG00000100676.1"; transcript_id "ENSMUST00000188103.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28860"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28860-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045764.1"; havana_transcript "OTTMUST00000119690.1";
mm10-chrY	HAVANA	exon	64597860	64598172	.	-	.	gene_id "ENSMUSG00000100676.1"; transcript_id "ENSMUST00000188103.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28860"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28860-201"; exon_number 1; exon_id "ENSMUSE00001331425.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045764.1"; havana_transcript "OTTMUST00000119690.1";
mm10-chrY	HAVANA	gene	64634929	64638168	.	+	.	gene_id "ENSMUSG00000101539.1"; gene_type "lincRNA"; gene_name "Gm28252"; level 2; havana_gene "OTTMUSG00000045750.1";
mm10-chrY	HAVANA	transcript	64634929	64638168	.	+	.	gene_id "ENSMUSG00000101539.1"; transcript_id "ENSMUST00000188457.1"; gene_type "lincRNA"; gene_name "Gm28252"; transcript_type "lincRNA"; transcript_name "Gm28252-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045750.1"; havana_transcript "OTTMUST00000119674.1";
mm10-chrY	HAVANA	exon	64634929	64635568	.	+	.	gene_id "ENSMUSG00000101539.1"; transcript_id "ENSMUST00000188457.1"; gene_type "lincRNA"; gene_name "Gm28252"; transcript_type "lincRNA"; transcript_name "Gm28252-201"; exon_number 1; exon_id "ENSMUSE00001333430.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045750.1"; havana_transcript "OTTMUST00000119674.1";
mm10-chrY	HAVANA	exon	64636054	64636239	.	+	.	gene_id "ENSMUSG00000101539.1"; transcript_id "ENSMUST00000188457.1"; gene_type "lincRNA"; gene_name "Gm28252"; transcript_type "lincRNA"; transcript_name "Gm28252-201"; exon_number 2; exon_id "ENSMUSE00001336089.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045750.1"; havana_transcript "OTTMUST00000119674.1";
mm10-chrY	HAVANA	exon	64636969	64637152	.	+	.	gene_id "ENSMUSG00000101539.1"; transcript_id "ENSMUST00000188457.1"; gene_type "lincRNA"; gene_name "Gm28252"; transcript_type "lincRNA"; transcript_name "Gm28252-201"; exon_number 3; exon_id "ENSMUSE00001333358.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045750.1"; havana_transcript "OTTMUST00000119674.1";
mm10-chrY	HAVANA	exon	64637679	64638168	.	+	.	gene_id "ENSMUSG00000101539.1"; transcript_id "ENSMUST00000188457.1"; gene_type "lincRNA"; gene_name "Gm28252"; transcript_type "lincRNA"; transcript_name "Gm28252-201"; exon_number 4; exon_id "ENSMUSE00001325938.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045750.1"; havana_transcript "OTTMUST00000119674.1";
mm10-chrY	HAVANA	transcript	64635382	64637747	.	+	.	gene_id "ENSMUSG00000101539.1"; transcript_id "ENSMUST00000189340.1"; gene_type "lincRNA"; gene_name "Gm28252"; transcript_type "lincRNA"; transcript_name "Gm28252-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045750.1"; havana_transcript "OTTMUST00000119675.1";
mm10-chrY	HAVANA	exon	64635382	64635568	.	+	.	gene_id "ENSMUSG00000101539.1"; transcript_id "ENSMUST00000189340.1"; gene_type "lincRNA"; gene_name "Gm28252"; transcript_type "lincRNA"; transcript_name "Gm28252-202"; exon_number 1; exon_id "ENSMUSE00001318388.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045750.1"; havana_transcript "OTTMUST00000119675.1";
mm10-chrY	HAVANA	exon	64636058	64636239	.	+	.	gene_id "ENSMUSG00000101539.1"; transcript_id "ENSMUST00000189340.1"; gene_type "lincRNA"; gene_name "Gm28252"; transcript_type "lincRNA"; transcript_name "Gm28252-202"; exon_number 2; exon_id "ENSMUSE00001323548.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045750.1"; havana_transcript "OTTMUST00000119675.1";
mm10-chrY	HAVANA	exon	64637679	64637747	.	+	.	gene_id "ENSMUSG00000101539.1"; transcript_id "ENSMUST00000189340.1"; gene_type "lincRNA"; gene_name "Gm28252"; transcript_type "lincRNA"; transcript_name "Gm28252-202"; exon_number 3; exon_id "ENSMUSE00001328749.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045750.1"; havana_transcript "OTTMUST00000119675.1";
mm10-chrY	HAVANA	gene	64784166	64784781	.	-	.	gene_id "ENSMUSG00000100353.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28859"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045765.1";
mm10-chrY	HAVANA	transcript	64784166	64784781	.	-	.	gene_id "ENSMUSG00000100353.1"; transcript_id "ENSMUST00000186650.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28859"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28859-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045765.1"; havana_transcript "OTTMUST00000119691.1";
mm10-chrY	HAVANA	exon	64784166	64784781	.	-	.	gene_id "ENSMUSG00000100353.1"; transcript_id "ENSMUST00000186650.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28859"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28859-201"; exon_number 1; exon_id "ENSMUSE00001325199.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045765.1"; havana_transcript "OTTMUST00000119691.1";
mm10-chrY	HAVANA	gene	64858686	64859337	.	-	.	gene_id "ENSMUSG00000101022.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20921"; level 2; havana_gene "OTTMUSG00000045766.1";
mm10-chrY	HAVANA	transcript	64858686	64859337	.	-	.	gene_id "ENSMUSG00000101022.1"; transcript_id "ENSMUST00000188265.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20921"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20921-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045766.1"; havana_transcript "OTTMUST00000119692.1";
mm10-chrY	HAVANA	exon	64858686	64859337	.	-	.	gene_id "ENSMUSG00000101022.1"; transcript_id "ENSMUST00000188265.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20921"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20921-201"; exon_number 1; exon_id "ENSMUSE00001322151.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045766.1"; havana_transcript "OTTMUST00000119692.1";
mm10-chrY	HAVANA	gene	64886721	64890470	.	-	.	gene_id "ENSMUSG00000100165.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28253"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045751.1";
mm10-chrY	HAVANA	transcript	64886721	64890470	.	-	.	gene_id "ENSMUSG00000100165.1"; transcript_id "ENSMUST00000186071.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28253"; transcript_type "processed_transcript"; transcript_name "Gm28253-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045751.1"; havana_transcript "OTTMUST00000119676.1";
mm10-chrY	HAVANA	exon	64890335	64890470	.	-	.	gene_id "ENSMUSG00000100165.1"; transcript_id "ENSMUST00000186071.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28253"; transcript_type "processed_transcript"; transcript_name "Gm28253-201"; exon_number 1; exon_id "ENSMUSE00001330689.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045751.1"; havana_transcript "OTTMUST00000119676.1";
mm10-chrY	HAVANA	exon	64888345	64888475	.	-	.	gene_id "ENSMUSG00000100165.1"; transcript_id "ENSMUST00000186071.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28253"; transcript_type "processed_transcript"; transcript_name "Gm28253-201"; exon_number 2; exon_id "ENSMUSE00001333461.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045751.1"; havana_transcript "OTTMUST00000119676.1";
mm10-chrY	HAVANA	exon	64887643	64887860	.	-	.	gene_id "ENSMUSG00000100165.1"; transcript_id "ENSMUST00000186071.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28253"; transcript_type "processed_transcript"; transcript_name "Gm28253-201"; exon_number 3; exon_id "ENSMUSE00001328131.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045751.1"; havana_transcript "OTTMUST00000119676.1";
mm10-chrY	HAVANA	exon	64886721	64886947	.	-	.	gene_id "ENSMUSG00000100165.1"; transcript_id "ENSMUST00000186071.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28253"; transcript_type "processed_transcript"; transcript_name "Gm28253-201"; exon_number 4; exon_id "ENSMUSE00001335390.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045751.1"; havana_transcript "OTTMUST00000119676.1";
mm10-chrY	HAVANA	transcript	64888265	64888879	.	-	.	gene_id "ENSMUSG00000100165.1"; transcript_id "ENSMUST00000187971.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28253"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28253-202"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045751.1"; havana_transcript "OTTMUST00000119677.1";
mm10-chrY	HAVANA	exon	64888265	64888879	.	-	.	gene_id "ENSMUSG00000100165.1"; transcript_id "ENSMUST00000187971.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28253"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28253-202"; exon_number 1; exon_id "ENSMUSE00001326206.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045751.1"; havana_transcript "OTTMUST00000119677.1";
mm10-chrY	HAVANA	gene	64925085	64925780	.	-	.	gene_id "ENSMUSG00000100077.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21826"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045752.1";
mm10-chrY	HAVANA	transcript	64925085	64925780	.	-	.	gene_id "ENSMUSG00000100077.1"; transcript_id "ENSMUST00000187451.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21826"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21826-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045752.1"; havana_transcript "OTTMUST00000119678.1";
mm10-chrY	HAVANA	exon	64925085	64925780	.	-	.	gene_id "ENSMUSG00000100077.1"; transcript_id "ENSMUST00000187451.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21826"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21826-201"; exon_number 1; exon_id "ENSMUSE00001325334.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045752.1"; havana_transcript "OTTMUST00000119678.1";
mm10-chrY	HAVANA	gene	64939471	64942813	.	+	.	gene_id "ENSMUSG00000101569.1"; gene_type "lincRNA"; gene_name "Gm28254"; level 2; havana_gene "OTTMUSG00000045753.1";
mm10-chrY	HAVANA	transcript	64939471	64942813	.	+	.	gene_id "ENSMUSG00000101569.1"; transcript_id "ENSMUST00000189207.1"; gene_type "lincRNA"; gene_name "Gm28254"; transcript_type "lincRNA"; transcript_name "Gm28254-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045753.1"; havana_transcript "OTTMUST00000119679.1";
mm10-chrY	HAVANA	exon	64939471	64939693	.	+	.	gene_id "ENSMUSG00000101569.1"; transcript_id "ENSMUST00000189207.1"; gene_type "lincRNA"; gene_name "Gm28254"; transcript_type "lincRNA"; transcript_name "Gm28254-201"; exon_number 1; exon_id "ENSMUSE00001320183.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045753.1"; havana_transcript "OTTMUST00000119679.1";
mm10-chrY	HAVANA	exon	64940871	64942813	.	+	.	gene_id "ENSMUSG00000101569.1"; transcript_id "ENSMUST00000189207.1"; gene_type "lincRNA"; gene_name "Gm28254"; transcript_type "lincRNA"; transcript_name "Gm28254-201"; exon_number 2; exon_id "ENSMUSE00001322520.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045753.1"; havana_transcript "OTTMUST00000119679.1";
mm10-chrY	HAVANA	gene	64944223	64944537	.	+	.	gene_id "ENSMUSG00000101184.1"; gene_type "processed_pseudogene"; gene_name "Gm28861"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045767.1";
mm10-chrY	HAVANA	transcript	64944223	64944537	.	+	.	gene_id "ENSMUSG00000101184.1"; transcript_id "ENSMUST00000189681.1"; gene_type "processed_pseudogene"; gene_name "Gm28861"; transcript_type "processed_pseudogene"; transcript_name "Gm28861-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045767.1"; havana_transcript "OTTMUST00000119693.1";
mm10-chrY	HAVANA	exon	64944223	64944537	.	+	.	gene_id "ENSMUSG00000101184.1"; transcript_id "ENSMUST00000189681.1"; gene_type "processed_pseudogene"; gene_name "Gm28861"; transcript_type "processed_pseudogene"; transcript_name "Gm28861-201"; exon_number 1; exon_id "ENSMUSE00001333556.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045767.1"; havana_transcript "OTTMUST00000119693.1";
mm10-chrY	HAVANA	gene	64980714	64981407	.	+	.	gene_id "ENSMUSG00000099386.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28255"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045754.1";
mm10-chrY	HAVANA	transcript	64980714	64981407	.	+	.	gene_id "ENSMUSG00000099386.1"; transcript_id "ENSMUST00000187101.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28255"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28255-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045754.1"; havana_transcript "OTTMUST00000119680.1";
mm10-chrY	HAVANA	exon	64980714	64981407	.	+	.	gene_id "ENSMUSG00000099386.1"; transcript_id "ENSMUST00000187101.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28255"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28255-201"; exon_number 1; exon_id "ENSMUSE00001326273.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045754.1"; havana_transcript "OTTMUST00000119680.1";
mm10-chrY	HAVANA	gene	65043717	65068377	.	-	.	gene_id "ENSMUSG00000095103.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21171"; level 2; havana_gene "OTTMUSG00000045793.1";
mm10-chrY	HAVANA	transcript	65043717	65068377	.	-	.	gene_id "ENSMUSG00000095103.2"; transcript_id "ENSMUST00000180048.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21171"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21171-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045793.1"; havana_transcript "OTTMUST00000119720.1";
mm10-chrY	HAVANA	exon	65068246	65068377	.	-	.	gene_id "ENSMUSG00000095103.2"; transcript_id "ENSMUST00000180048.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21171"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21171-201"; exon_number 1; exon_id "ENSMUSE00001021961.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045793.1"; havana_transcript "OTTMUST00000119720.1";
mm10-chrY	HAVANA	exon	65062842	65062908	.	-	.	gene_id "ENSMUSG00000095103.2"; transcript_id "ENSMUST00000180048.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21171"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21171-201"; exon_number 2; exon_id "ENSMUSE00001069762.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045793.1"; havana_transcript "OTTMUST00000119720.1";
mm10-chrY	HAVANA	exon	65062135	65062169	.	-	.	gene_id "ENSMUSG00000095103.2"; transcript_id "ENSMUST00000180048.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21171"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21171-201"; exon_number 3; exon_id "ENSMUSE00001089686.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045793.1"; havana_transcript "OTTMUST00000119720.1";
mm10-chrY	HAVANA	exon	65055025	65055091	.	-	.	gene_id "ENSMUSG00000095103.2"; transcript_id "ENSMUST00000180048.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21171"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21171-201"; exon_number 4; exon_id "ENSMUSE00001322661.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045793.1"; havana_transcript "OTTMUST00000119720.1";
mm10-chrY	HAVANA	exon	65054411	65054445	.	-	.	gene_id "ENSMUSG00000095103.2"; transcript_id "ENSMUST00000180048.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21171"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21171-201"; exon_number 5; exon_id "ENSMUSE00001320835.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045793.1"; havana_transcript "OTTMUST00000119720.1";
mm10-chrY	HAVANA	exon	65047122	65047239	.	-	.	gene_id "ENSMUSG00000095103.2"; transcript_id "ENSMUST00000180048.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21171"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21171-201"; exon_number 6; exon_id "ENSMUSE00001046493.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045793.1"; havana_transcript "OTTMUST00000119720.1";
mm10-chrY	HAVANA	exon	65046244	65046343	.	-	.	gene_id "ENSMUSG00000095103.2"; transcript_id "ENSMUST00000180048.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21171"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21171-201"; exon_number 7; exon_id "ENSMUSE00001011350.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045793.1"; havana_transcript "OTTMUST00000119720.1";
mm10-chrY	HAVANA	exon	65044096	65044194	.	-	.	gene_id "ENSMUSG00000095103.2"; transcript_id "ENSMUST00000180048.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21171"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21171-201"; exon_number 8; exon_id "ENSMUSE00000973734.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045793.1"; havana_transcript "OTTMUST00000119720.1";
mm10-chrY	HAVANA	exon	65043717	65043736	.	-	.	gene_id "ENSMUSG00000095103.2"; transcript_id "ENSMUST00000180048.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21171"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21171-201"; exon_number 9; exon_id "ENSMUSE00001332943.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045793.1"; havana_transcript "OTTMUST00000119720.1";
mm10-chrY	HAVANA	gene	65205185	65207527	.	-	.	gene_id "ENSMUSG00000095785.2"; gene_type "protein_coding"; gene_name "Gm20924"; level 2; havana_gene "OTTMUSG00000045794.1";
mm10-chrY	HAVANA	transcript	65205185	65207527	.	-	.	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000186910.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-202"; level 2; protein_id "ENSMUSP00000139614.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1"; havana_transcript "OTTMUST00000119721.1";
mm10-chrY	HAVANA	exon	65207404	65207527	.	-	.	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000186910.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-202"; exon_number 1; exon_id "ENSMUSE00001328560.1"; level 2; protein_id "ENSMUSP00000139614.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1"; havana_transcript "OTTMUST00000119721.1";
mm10-chrY	HAVANA	exon	65205185	65206290	.	-	.	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000186910.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-202"; exon_number 2; exon_id "ENSMUSE00001330961.1"; level 2; protein_id "ENSMUSP00000139614.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1"; havana_transcript "OTTMUST00000119721.1";
mm10-chrY	HAVANA	CDS	65205328	65206008	.	-	0	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000186910.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-202"; exon_number 2; exon_id "ENSMUSE00001330961.1"; level 2; protein_id "ENSMUSP00000139614.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1"; havana_transcript "OTTMUST00000119721.1";
mm10-chrY	HAVANA	start_codon	65206006	65206008	.	-	0	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000186910.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-202"; exon_number 2; exon_id "ENSMUSE00001330961.1"; level 2; protein_id "ENSMUSP00000139614.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1"; havana_transcript "OTTMUST00000119721.1";
mm10-chrY	HAVANA	stop_codon	65205325	65205327	.	-	0	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000186910.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-202"; exon_number 2; exon_id "ENSMUSE00001330961.1"; level 2; protein_id "ENSMUSP00000139614.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1"; havana_transcript "OTTMUST00000119721.1";
mm10-chrY	HAVANA	UTR	65207404	65207527	.	-	.	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000186910.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-202"; exon_number 1; exon_id "ENSMUSE00001328560.1"; level 2; protein_id "ENSMUSP00000139614.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1"; havana_transcript "OTTMUST00000119721.1";
mm10-chrY	HAVANA	UTR	65205185	65205327	.	-	.	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000186910.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-202"; exon_number 2; exon_id "ENSMUSE00001330961.1"; level 2; protein_id "ENSMUSP00000139614.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1"; havana_transcript "OTTMUST00000119721.1";
mm10-chrY	HAVANA	UTR	65206009	65206290	.	-	.	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000186910.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-202"; exon_number 2; exon_id "ENSMUSE00001330961.1"; level 2; protein_id "ENSMUSP00000139614.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1"; havana_transcript "OTTMUST00000119721.1";
mm10-chrY	ENSEMBL	transcript	65205325	65206008	.	-	.	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000177663.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-201"; level 3; protein_id "ENSMUSP00000137639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1";
mm10-chrY	ENSEMBL	exon	65205325	65206008	.	-	.	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000177663.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-201"; exon_number 1; exon_id "ENSMUSE00001010392.1"; level 3; protein_id "ENSMUSP00000137639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1";
mm10-chrY	ENSEMBL	CDS	65205328	65206008	.	-	0	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000177663.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-201"; exon_number 1; exon_id "ENSMUSE00001010392.1"; level 3; protein_id "ENSMUSP00000137639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1";
mm10-chrY	ENSEMBL	start_codon	65206006	65206008	.	-	0	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000177663.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-201"; exon_number 1; exon_id "ENSMUSE00001010392.1"; level 3; protein_id "ENSMUSP00000137639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1";
mm10-chrY	ENSEMBL	stop_codon	65205325	65205327	.	-	0	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000177663.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-201"; exon_number 1; exon_id "ENSMUSE00001010392.1"; level 3; protein_id "ENSMUSP00000137639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1";
mm10-chrY	ENSEMBL	UTR	65205325	65205327	.	-	.	gene_id "ENSMUSG00000095785.2"; transcript_id "ENSMUST00000177663.1"; gene_type "protein_coding"; gene_name "Gm20924"; transcript_type "protein_coding"; transcript_name "Gm20924-201"; exon_number 1; exon_id "ENSMUSE00001010392.1"; level 3; protein_id "ENSMUSP00000137639.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045794.1";
mm10-chrY	HAVANA	gene	65227389	65238079	.	-	.	gene_id "ENSMUSG00000101982.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045795.1";
mm10-chrY	HAVANA	transcript	65227389	65238079	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000190416.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119722.1";
mm10-chrY	HAVANA	exon	65237944	65238079	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000190416.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-206"; exon_number 1; exon_id "ENSMUSE00001321307.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119722.1";
mm10-chrY	HAVANA	exon	65228549	65228682	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000190416.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-206"; exon_number 2; exon_id "ENSMUSE00001332743.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119722.1";
mm10-chrY	HAVANA	exon	65227389	65228254	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000190416.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-206"; exon_number 3; exon_id "ENSMUSE00001318851.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119722.1";
mm10-chrY	HAVANA	transcript	65227477	65238079	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000189255.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-204"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119723.1";
mm10-chrY	HAVANA	exon	65237944	65238079	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000189255.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-204"; exon_number 1; exon_id "ENSMUSE00001321307.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119723.1";
mm10-chrY	HAVANA	exon	65235935	65236065	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000189255.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-204"; exon_number 2; exon_id "ENSMUSE00001329432.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119723.1";
mm10-chrY	HAVANA	exon	65235233	65235450	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000189255.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-204"; exon_number 3; exon_id "ENSMUSE00001331192.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119723.1";
mm10-chrY	HAVANA	exon	65234354	65234537	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000189255.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-204"; exon_number 4; exon_id "ENSMUSE00001322643.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119723.1";
mm10-chrY	HAVANA	exon	65228549	65228682	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000189255.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-204"; exon_number 5; exon_id "ENSMUSE00001332743.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119723.1";
mm10-chrY	HAVANA	exon	65227477	65228254	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000189255.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-204"; exon_number 6; exon_id "ENSMUSE00001321773.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119723.1";
mm10-chrY	HAVANA	transcript	65233796	65236030	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000187865.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119724.1";
mm10-chrY	HAVANA	exon	65235935	65236030	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000187865.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-202"; exon_number 1; exon_id "ENSMUSE00001327253.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119724.1";
mm10-chrY	HAVANA	exon	65233796	65233837	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000187865.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-202"; exon_number 2; exon_id "ENSMUSE00001330491.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119724.1";
mm10-chrY	HAVANA	transcript	65233796	65236032	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000186544.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119725.1";
mm10-chrY	HAVANA	exon	65235935	65236032	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000186544.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-201"; exon_number 1; exon_id "ENSMUSE00001320888.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119725.1";
mm10-chrY	HAVANA	exon	65235233	65235450	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000186544.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-201"; exon_number 2; exon_id "ENSMUSE00001331192.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119725.1";
mm10-chrY	HAVANA	exon	65234354	65234537	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000186544.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-201"; exon_number 3; exon_id "ENSMUSE00001322643.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119725.1";
mm10-chrY	HAVANA	exon	65233796	65233837	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000186544.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-201"; exon_number 4; exon_id "ENSMUSE00001330491.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119725.1";
mm10-chrY	HAVANA	transcript	65233796	65236032	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000189490.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-205"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119726.1";
mm10-chrY	HAVANA	exon	65235935	65236032	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000189490.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-205"; exon_number 1; exon_id "ENSMUSE00001320888.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119726.1";
mm10-chrY	HAVANA	exon	65234354	65234537	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000189490.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-205"; exon_number 2; exon_id "ENSMUSE00001322643.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119726.1";
mm10-chrY	HAVANA	exon	65233796	65233837	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000189490.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-205"; exon_number 3; exon_id "ENSMUSE00001330491.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119726.1";
mm10-chrY	HAVANA	transcript	65233796	65238023	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000188248.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119727.1";
mm10-chrY	HAVANA	exon	65237944	65238023	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000188248.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-203"; exon_number 1; exon_id "ENSMUSE00001324155.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119727.1";
mm10-chrY	HAVANA	exon	65236376	65236612	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000188248.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-203"; exon_number 2; exon_id "ENSMUSE00001321113.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119727.1";
mm10-chrY	HAVANA	exon	65234354	65234537	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000188248.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-203"; exon_number 3; exon_id "ENSMUSE00001322643.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119727.1";
mm10-chrY	HAVANA	exon	65233796	65233837	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000188248.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "processed_transcript"; transcript_name "Gm28990-203"; exon_number 4; exon_id "ENSMUSE00001330491.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119727.1";
mm10-chrY	HAVANA	transcript	65235855	65236469	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000191219.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "transcribed_processed_pseudogene"; transcript_name "Gm28990-207"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119728.1";
mm10-chrY	HAVANA	exon	65235855	65236469	.	-	.	gene_id "ENSMUSG00000101982.6"; transcript_id "ENSMUST00000191219.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28990"; transcript_type "transcribed_processed_pseudogene"; transcript_name "Gm28990-207"; exon_number 1; exon_id "ENSMUSE00001324707.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045795.1"; havana_transcript "OTTMUST00000119728.1";
mm10-chrY	HAVANA	gene	65272580	65273275	.	-	.	gene_id "ENSMUSG00000099487.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21848"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045796.1";
mm10-chrY	HAVANA	transcript	65272580	65273275	.	-	.	gene_id "ENSMUSG00000099487.1"; transcript_id "ENSMUST00000187722.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21848"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21848-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045796.1"; havana_transcript "OTTMUST00000119729.1";
mm10-chrY	HAVANA	exon	65272580	65273275	.	-	.	gene_id "ENSMUSG00000099487.1"; transcript_id "ENSMUST00000187722.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21848"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21848-201"; exon_number 1; exon_id "ENSMUSE00001329662.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045796.1"; havana_transcript "OTTMUST00000119729.1";
mm10-chrY	HAVANA	gene	65315569	65318808	.	+	.	gene_id "ENSMUSG00000101507.1"; gene_type "lincRNA"; gene_name "Gm29457"; level 2; havana_gene "OTTMUSG00000045806.1";
mm10-chrY	HAVANA	transcript	65315569	65318808	.	+	.	gene_id "ENSMUSG00000101507.1"; transcript_id "ENSMUST00000188224.1"; gene_type "lincRNA"; gene_name "Gm29457"; transcript_type "lincRNA"; transcript_name "Gm29457-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045806.1"; havana_transcript "OTTMUST00000119744.1";
mm10-chrY	HAVANA	exon	65315569	65316208	.	+	.	gene_id "ENSMUSG00000101507.1"; transcript_id "ENSMUST00000188224.1"; gene_type "lincRNA"; gene_name "Gm29457"; transcript_type "lincRNA"; transcript_name "Gm29457-201"; exon_number 1; exon_id "ENSMUSE00001318412.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045806.1"; havana_transcript "OTTMUST00000119744.1";
mm10-chrY	HAVANA	exon	65316694	65316879	.	+	.	gene_id "ENSMUSG00000101507.1"; transcript_id "ENSMUST00000188224.1"; gene_type "lincRNA"; gene_name "Gm29457"; transcript_type "lincRNA"; transcript_name "Gm29457-201"; exon_number 2; exon_id "ENSMUSE00001324029.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045806.1"; havana_transcript "OTTMUST00000119744.1";
mm10-chrY	HAVANA	exon	65317609	65317792	.	+	.	gene_id "ENSMUSG00000101507.1"; transcript_id "ENSMUST00000188224.1"; gene_type "lincRNA"; gene_name "Gm29457"; transcript_type "lincRNA"; transcript_name "Gm29457-201"; exon_number 3; exon_id "ENSMUSE00001331823.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045806.1"; havana_transcript "OTTMUST00000119744.1";
mm10-chrY	HAVANA	exon	65318320	65318808	.	+	.	gene_id "ENSMUSG00000101507.1"; transcript_id "ENSMUST00000188224.1"; gene_type "lincRNA"; gene_name "Gm29457"; transcript_type "lincRNA"; transcript_name "Gm29457-201"; exon_number 4; exon_id "ENSMUSE00001329213.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045806.1"; havana_transcript "OTTMUST00000119744.1";
mm10-chrY	HAVANA	transcript	65316022	65318388	.	+	.	gene_id "ENSMUSG00000101507.1"; transcript_id "ENSMUST00000189814.1"; gene_type "lincRNA"; gene_name "Gm29457"; transcript_type "lincRNA"; transcript_name "Gm29457-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045806.1"; havana_transcript "OTTMUST00000119745.1";
mm10-chrY	HAVANA	exon	65316022	65316208	.	+	.	gene_id "ENSMUSG00000101507.1"; transcript_id "ENSMUST00000189814.1"; gene_type "lincRNA"; gene_name "Gm29457"; transcript_type "lincRNA"; transcript_name "Gm29457-202"; exon_number 1; exon_id "ENSMUSE00001321233.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045806.1"; havana_transcript "OTTMUST00000119745.1";
mm10-chrY	HAVANA	exon	65316698	65316879	.	+	.	gene_id "ENSMUSG00000101507.1"; transcript_id "ENSMUST00000189814.1"; gene_type "lincRNA"; gene_name "Gm29457"; transcript_type "lincRNA"; transcript_name "Gm29457-202"; exon_number 2; exon_id "ENSMUSE00001324250.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045806.1"; havana_transcript "OTTMUST00000119745.1";
mm10-chrY	HAVANA	exon	65318320	65318388	.	+	.	gene_id "ENSMUSG00000101507.1"; transcript_id "ENSMUST00000189814.1"; gene_type "lincRNA"; gene_name "Gm29457"; transcript_type "lincRNA"; transcript_name "Gm29457-202"; exon_number 3; exon_id "ENSMUSE00001334013.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045806.1"; havana_transcript "OTTMUST00000119745.1";
mm10-chrY	HAVANA	gene	65377690	65403917	.	+	.	gene_id "ENSMUSG00000093993.7"; gene_type "protein_coding"; gene_name "Gm20736"; level 2; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	HAVANA	transcript	65377690	65403917	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	exon	65377690	65377745	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 1; exon_id "ENSMUSE00001326031.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	exon	65379107	65379241	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 2; exon_id "ENSMUSE00001037710.2"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	CDS	65379124	65379241	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 2; exon_id "ENSMUSE00001037710.2"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	start_codon	65379124	65379126	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 2; exon_id "ENSMUSE00001037710.2"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	exon	65384570	65384636	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 3; exon_id "ENSMUSE00001046962.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	CDS	65384570	65384636	.	+	2	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 3; exon_id "ENSMUSE00001046962.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	exon	65385316	65385350	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 4; exon_id "ENSMUSE00001049511.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	CDS	65385316	65385350	.	+	1	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 4; exon_id "ENSMUSE00001049511.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	exon	65400194	65400311	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 5; exon_id "ENSMUSE00001006345.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	CDS	65400194	65400311	.	+	2	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 5; exon_id "ENSMUSE00001006345.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	exon	65401092	65401191	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 6; exon_id "ENSMUSE00001027194.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	CDS	65401092	65401191	.	+	1	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 6; exon_id "ENSMUSE00001027194.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	exon	65403234	65403332	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 7; exon_id "ENSMUSE00001066592.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	CDS	65403234	65403332	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 7; exon_id "ENSMUSE00001066592.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	exon	65403692	65403917	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 8; exon_id "ENSMUSE00001326146.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	CDS	65403692	65403718	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 8; exon_id "ENSMUSE00001326146.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	stop_codon	65403719	65403721	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 8; exon_id "ENSMUSE00001326146.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	UTR	65377690	65377745	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 1; exon_id "ENSMUSE00001326031.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	UTR	65379107	65379123	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 2; exon_id "ENSMUSE00001037710.2"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	UTR	65403719	65403917	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000190282.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-203"; exon_number 8; exon_id "ENSMUSE00001326146.1"; level 2; protein_id "ENSMUSP00000139870.1"; transcript_support_level "1"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000122549.1";
mm10-chrY	HAVANA	transcript	65377702	65403917	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	exon	65377702	65377745	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 1; exon_id "ENSMUSE00001318606.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	exon	65379110	65379241	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 2; exon_id "ENSMUSE00001334929.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	CDS	65379124	65379241	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 2; exon_id "ENSMUSE00001334929.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	start_codon	65379124	65379126	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 2; exon_id "ENSMUSE00001334929.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	exon	65384570	65384636	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 3; exon_id "ENSMUSE00001046962.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	CDS	65384570	65384636	.	+	2	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 3; exon_id "ENSMUSE00001046962.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	exon	65385316	65385350	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 4; exon_id "ENSMUSE00001049511.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	CDS	65385316	65385350	.	+	1	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 4; exon_id "ENSMUSE00001049511.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	exon	65392346	65392412	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 5; exon_id "ENSMUSE00001330423.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	CDS	65392346	65392412	.	+	2	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 5; exon_id "ENSMUSE00001330423.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	exon	65392991	65393025	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 6; exon_id "ENSMUSE00001322010.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	CDS	65392991	65393025	.	+	1	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 6; exon_id "ENSMUSE00001322010.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	exon	65400194	65400311	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 7; exon_id "ENSMUSE00001006345.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	CDS	65400194	65400311	.	+	2	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 7; exon_id "ENSMUSE00001006345.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	exon	65401092	65401191	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 8; exon_id "ENSMUSE00001027194.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	CDS	65401092	65401191	.	+	1	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 8; exon_id "ENSMUSE00001027194.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	exon	65403234	65403332	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 9; exon_id "ENSMUSE00001066592.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	CDS	65403234	65403332	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 9; exon_id "ENSMUSE00001066592.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	exon	65403692	65403917	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 10; exon_id "ENSMUSE00001326146.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	CDS	65403692	65403718	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 10; exon_id "ENSMUSE00001326146.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	stop_codon	65403719	65403721	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 10; exon_id "ENSMUSE00001326146.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	UTR	65377702	65377745	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 1; exon_id "ENSMUSE00001318606.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	UTR	65379110	65379123	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 2; exon_id "ENSMUSE00001334929.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	HAVANA	UTR	65403719	65403917	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000185550.6"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-202"; exon_number 10; exon_id "ENSMUSE00001326146.1"; level 2; protein_id "ENSMUSP00000140139.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045797.2"; havana_transcript "OTTMUST00000119731.1";
mm10-chrY	ENSEMBL	transcript	65379124	65403721	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	exon	65379124	65379241	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 1; exon_id "ENSMUSE00001073669.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	CDS	65379124	65379241	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 1; exon_id "ENSMUSE00001073669.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	start_codon	65379124	65379126	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 1; exon_id "ENSMUSE00001073669.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	exon	65384570	65384636	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 2; exon_id "ENSMUSE00001046962.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	CDS	65384570	65384636	.	+	2	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 2; exon_id "ENSMUSE00001046962.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	exon	65385316	65385350	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 3; exon_id "ENSMUSE00001049511.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	CDS	65385316	65385350	.	+	1	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 3; exon_id "ENSMUSE00001049511.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	exon	65400194	65400311	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 4; exon_id "ENSMUSE00001006345.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	CDS	65400194	65400311	.	+	2	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 4; exon_id "ENSMUSE00001006345.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	exon	65401092	65401191	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 5; exon_id "ENSMUSE00001027194.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	CDS	65401092	65401191	.	+	1	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 5; exon_id "ENSMUSE00001027194.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	exon	65403234	65403332	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 6; exon_id "ENSMUSE00001066592.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	CDS	65403234	65403332	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 6; exon_id "ENSMUSE00001066592.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	exon	65403692	65403721	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 7; exon_id "ENSMUSE00000973923.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	CDS	65403692	65403718	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 7; exon_id "ENSMUSE00000973923.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	stop_codon	65403719	65403721	.	+	0	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 7; exon_id "ENSMUSE00000973923.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	ENSEMBL	UTR	65403719	65403721	.	+	.	gene_id "ENSMUSG00000093993.7"; transcript_id "ENSMUST00000178198.1"; gene_type "protein_coding"; gene_name "Gm20736"; transcript_type "protein_coding"; transcript_name "Gm20736-201"; exon_number 7; exon_id "ENSMUSE00000973923.1"; level 3; protein_id "ENSMUSP00000136973.1"; transcript_support_level "5"; tag "basic"; tag "CCDS"; ccdsid "CCDS57888.1"; havana_gene "OTTMUSG00000045797.2";
mm10-chrY	HAVANA	gene	65464101	65464796	.	-	.	gene_id "ENSMUSG00000100956.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28558"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045807.1";
mm10-chrY	HAVANA	transcript	65464101	65464796	.	-	.	gene_id "ENSMUSG00000100956.1"; transcript_id "ENSMUST00000187373.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28558"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28558-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045807.1"; havana_transcript "OTTMUST00000119746.1";
mm10-chrY	HAVANA	exon	65464101	65464796	.	-	.	gene_id "ENSMUSG00000100956.1"; transcript_id "ENSMUST00000187373.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28558"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28558-201"; exon_number 1; exon_id "ENSMUSE00001329053.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045807.1"; havana_transcript "OTTMUST00000119746.1";
mm10-chrY	HAVANA	gene	65501095	65501409	.	-	.	gene_id "ENSMUSG00000100942.1"; gene_type "processed_pseudogene"; gene_name "Gm28560"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045808.1";
mm10-chrY	HAVANA	transcript	65501095	65501409	.	-	.	gene_id "ENSMUSG00000100942.1"; transcript_id "ENSMUST00000186091.1"; gene_type "processed_pseudogene"; gene_name "Gm28560"; transcript_type "processed_pseudogene"; transcript_name "Gm28560-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045808.1"; havana_transcript "OTTMUST00000119747.1";
mm10-chrY	HAVANA	exon	65501095	65501409	.	-	.	gene_id "ENSMUSG00000100942.1"; transcript_id "ENSMUST00000186091.1"; gene_type "processed_pseudogene"; gene_name "Gm28560"; transcript_type "processed_pseudogene"; transcript_name "Gm28560-201"; exon_number 1; exon_id "ENSMUSE00001334558.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045808.1"; havana_transcript "OTTMUST00000119747.1";
mm10-chrY	HAVANA	gene	65502815	65506157	.	-	.	gene_id "ENSMUSG00000100333.1"; gene_type "lincRNA"; gene_name "Gm28561"; level 2; havana_gene "OTTMUSG00000045809.1";
mm10-chrY	HAVANA	transcript	65502815	65506157	.	-	.	gene_id "ENSMUSG00000100333.1"; transcript_id "ENSMUST00000189366.1"; gene_type "lincRNA"; gene_name "Gm28561"; transcript_type "lincRNA"; transcript_name "Gm28561-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045809.1"; havana_transcript "OTTMUST00000119748.1";
mm10-chrY	HAVANA	exon	65505935	65506157	.	-	.	gene_id "ENSMUSG00000100333.1"; transcript_id "ENSMUST00000189366.1"; gene_type "lincRNA"; gene_name "Gm28561"; transcript_type "lincRNA"; transcript_name "Gm28561-201"; exon_number 1; exon_id "ENSMUSE00001329254.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045809.1"; havana_transcript "OTTMUST00000119748.1";
mm10-chrY	HAVANA	exon	65502815	65504758	.	-	.	gene_id "ENSMUSG00000100333.1"; transcript_id "ENSMUST00000189366.1"; gene_type "lincRNA"; gene_name "Gm28561"; transcript_type "lincRNA"; transcript_name "Gm28561-201"; exon_number 2; exon_id "ENSMUSE00001329031.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045809.1"; havana_transcript "OTTMUST00000119748.1";
mm10-chrY	HAVANA	gene	65538170	65541407	.	+	.	gene_id "ENSMUSG00000100126.1"; gene_type "lincRNA"; gene_name "Gm29584"; level 2; havana_gene "OTTMUSG00000045810.1";
mm10-chrY	HAVANA	transcript	65538170	65541407	.	+	.	gene_id "ENSMUSG00000100126.1"; transcript_id "ENSMUST00000190181.1"; gene_type "lincRNA"; gene_name "Gm29584"; transcript_type "lincRNA"; transcript_name "Gm29584-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045810.1"; havana_transcript "OTTMUST00000119749.1";
mm10-chrY	HAVANA	exon	65538170	65538808	.	+	.	gene_id "ENSMUSG00000100126.1"; transcript_id "ENSMUST00000190181.1"; gene_type "lincRNA"; gene_name "Gm29584"; transcript_type "lincRNA"; transcript_name "Gm29584-202"; exon_number 1; exon_id "ENSMUSE00001331187.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045810.1"; havana_transcript "OTTMUST00000119749.1";
mm10-chrY	HAVANA	exon	65539294	65539479	.	+	.	gene_id "ENSMUSG00000100126.1"; transcript_id "ENSMUST00000190181.1"; gene_type "lincRNA"; gene_name "Gm29584"; transcript_type "lincRNA"; transcript_name "Gm29584-202"; exon_number 2; exon_id "ENSMUSE00001328819.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045810.1"; havana_transcript "OTTMUST00000119749.1";
mm10-chrY	HAVANA	exon	65540209	65540392	.	+	.	gene_id "ENSMUSG00000100126.1"; transcript_id "ENSMUST00000190181.1"; gene_type "lincRNA"; gene_name "Gm29584"; transcript_type "lincRNA"; transcript_name "Gm29584-202"; exon_number 3; exon_id "ENSMUSE00001332412.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045810.1"; havana_transcript "OTTMUST00000119749.1";
mm10-chrY	HAVANA	exon	65540919	65541407	.	+	.	gene_id "ENSMUSG00000100126.1"; transcript_id "ENSMUST00000190181.1"; gene_type "lincRNA"; gene_name "Gm29584"; transcript_type "lincRNA"; transcript_name "Gm29584-202"; exon_number 4; exon_id "ENSMUSE00001331034.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045810.1"; havana_transcript "OTTMUST00000119749.1";
mm10-chrY	HAVANA	transcript	65538623	65540987	.	+	.	gene_id "ENSMUSG00000100126.1"; transcript_id "ENSMUST00000185252.1"; gene_type "lincRNA"; gene_name "Gm29584"; transcript_type "lincRNA"; transcript_name "Gm29584-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045810.1"; havana_transcript "OTTMUST00000119750.1";
mm10-chrY	HAVANA	exon	65538623	65538808	.	+	.	gene_id "ENSMUSG00000100126.1"; transcript_id "ENSMUST00000185252.1"; gene_type "lincRNA"; gene_name "Gm29584"; transcript_type "lincRNA"; transcript_name "Gm29584-201"; exon_number 1; exon_id "ENSMUSE00001320485.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045810.1"; havana_transcript "OTTMUST00000119750.1";
mm10-chrY	HAVANA	exon	65539298	65539479	.	+	.	gene_id "ENSMUSG00000100126.1"; transcript_id "ENSMUST00000185252.1"; gene_type "lincRNA"; gene_name "Gm29584"; transcript_type "lincRNA"; transcript_name "Gm29584-201"; exon_number 2; exon_id "ENSMUSE00001335141.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045810.1"; havana_transcript "OTTMUST00000119750.1";
mm10-chrY	HAVANA	exon	65540919	65540987	.	+	.	gene_id "ENSMUSG00000100126.1"; transcript_id "ENSMUST00000185252.1"; gene_type "lincRNA"; gene_name "Gm29584"; transcript_type "lincRNA"; transcript_name "Gm29584-201"; exon_number 3; exon_id "ENSMUSE00001324697.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045810.1"; havana_transcript "OTTMUST00000119750.1";
mm10-chrY	HAVANA	gene	65648517	65649174	.	-	.	gene_id "ENSMUSG00000101679.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20936"; level 2; havana_gene "OTTMUSG00000045812.1";
mm10-chrY	HAVANA	transcript	65648517	65649174	.	-	.	gene_id "ENSMUSG00000101679.1"; transcript_id "ENSMUST00000191049.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20936"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20936-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045812.1"; havana_transcript "OTTMUST00000119755.1";
mm10-chrY	HAVANA	exon	65648517	65649174	.	-	.	gene_id "ENSMUSG00000101679.1"; transcript_id "ENSMUST00000191049.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20936"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20936-201"; exon_number 1; exon_id "ENSMUSE00001320955.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045812.1"; havana_transcript "OTTMUST00000119755.1";
mm10-chrY	HAVANA	gene	65723224	65723919	.	-	.	gene_id "ENSMUSG00000099434.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20934"; level 2; havana_gene "OTTMUSG00000045813.1";
mm10-chrY	HAVANA	transcript	65723224	65723919	.	-	.	gene_id "ENSMUSG00000099434.1"; transcript_id "ENSMUST00000190359.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20934"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20934-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045813.1"; havana_transcript "OTTMUST00000119756.1";
mm10-chrY	HAVANA	exon	65723224	65723919	.	-	.	gene_id "ENSMUSG00000099434.1"; transcript_id "ENSMUST00000190359.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20934"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20934-201"; exon_number 1; exon_id "ENSMUSE00001319686.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045813.1"; havana_transcript "OTTMUST00000119756.1";
mm10-chrY	HAVANA	gene	65744349	65754999	.	-	.	gene_id "ENSMUSG00000101177.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045814.2";
mm10-chrY	HAVANA	transcript	65744349	65754999	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000186478.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119757.1";
mm10-chrY	HAVANA	exon	65754864	65754999	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000186478.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-202"; exon_number 1; exon_id "ENSMUSE00001329438.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119757.1";
mm10-chrY	HAVANA	exon	65745510	65745643	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000186478.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-202"; exon_number 2; exon_id "ENSMUSE00001324486.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119757.1";
mm10-chrY	HAVANA	exon	65744349	65745214	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000186478.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-202"; exon_number 3; exon_id "ENSMUSE00001329270.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119757.1";
mm10-chrY	HAVANA	transcript	65744914	65754999	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000185225.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119758.1";
mm10-chrY	HAVANA	exon	65754864	65754999	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000185225.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-201"; exon_number 1; exon_id "ENSMUSE00001329438.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119758.1";
mm10-chrY	HAVANA	exon	65752880	65753010	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000185225.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-201"; exon_number 2; exon_id "ENSMUSE00001334635.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119758.1";
mm10-chrY	HAVANA	exon	65752178	65752395	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000185225.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-201"; exon_number 3; exon_id "ENSMUSE00001319375.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119758.1";
mm10-chrY	HAVANA	exon	65751299	65751482	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000185225.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-201"; exon_number 4; exon_id "ENSMUSE00001323088.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119758.1";
mm10-chrY	HAVANA	exon	65745510	65745643	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000185225.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-201"; exon_number 5; exon_id "ENSMUSE00001324486.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119758.1";
mm10-chrY	HAVANA	exon	65744914	65745214	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000185225.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-201"; exon_number 6; exon_id "ENSMUSE00001327076.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119758.1";
mm10-chrY	HAVANA	transcript	65750714	65754911	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187684.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-205"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119780.1";
mm10-chrY	HAVANA	exon	65754864	65754911	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187684.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-205"; exon_number 1; exon_id "ENSMUSE00001330521.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119780.1";
mm10-chrY	HAVANA	exon	65752880	65753010	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187684.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-205"; exon_number 2; exon_id "ENSMUSE00001334635.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119780.1";
mm10-chrY	HAVANA	exon	65750714	65750783	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187684.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-205"; exon_number 3; exon_id "ENSMUSE00001321596.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119780.1";
mm10-chrY	HAVANA	transcript	65750714	65754911	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000189070.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119781.1";
mm10-chrY	HAVANA	exon	65754864	65754911	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000189070.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-206"; exon_number 1; exon_id "ENSMUSE00001330521.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119781.1";
mm10-chrY	HAVANA	exon	65751299	65751482	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000189070.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-206"; exon_number 2; exon_id "ENSMUSE00001323088.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119781.1";
mm10-chrY	HAVANA	exon	65750714	65750783	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000189070.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-206"; exon_number 3; exon_id "ENSMUSE00001321596.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119781.1";
mm10-chrY	HAVANA	transcript	65750716	65754917	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187593.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-204"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119782.1";
mm10-chrY	HAVANA	exon	65754864	65754917	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187593.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-204"; exon_number 1; exon_id "ENSMUSE00001324365.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119782.1";
mm10-chrY	HAVANA	exon	65752880	65753010	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187593.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-204"; exon_number 2; exon_id "ENSMUSE00001334635.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119782.1";
mm10-chrY	HAVANA	exon	65752178	65752395	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187593.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-204"; exon_number 3; exon_id "ENSMUSE00001319375.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119782.1";
mm10-chrY	HAVANA	exon	65751299	65751482	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187593.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-204"; exon_number 4; exon_id "ENSMUSE00001323088.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119782.1";
mm10-chrY	HAVANA	exon	65750716	65750783	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187593.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-204"; exon_number 5; exon_id "ENSMUSE00001336061.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119782.1";
mm10-chrY	HAVANA	transcript	65750742	65752977	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187326.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119783.1";
mm10-chrY	HAVANA	exon	65752880	65752977	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187326.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-203"; exon_number 1; exon_id "ENSMUSE00001332068.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119783.1";
mm10-chrY	HAVANA	exon	65751299	65751482	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187326.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-203"; exon_number 2; exon_id "ENSMUSE00001323088.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119783.1";
mm10-chrY	HAVANA	exon	65750742	65750783	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000187326.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-203"; exon_number 3; exon_id "ENSMUSE00001335105.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119783.1";
mm10-chrY	HAVANA	transcript	65750742	65754942	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000191130.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-208"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119759.1";
mm10-chrY	HAVANA	exon	65754864	65754942	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000191130.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-208"; exon_number 1; exon_id "ENSMUSE00001321512.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119759.1";
mm10-chrY	HAVANA	exon	65753321	65753557	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000191130.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-208"; exon_number 2; exon_id "ENSMUSE00001324846.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119759.1";
mm10-chrY	HAVANA	exon	65751299	65751482	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000191130.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-208"; exon_number 3; exon_id "ENSMUSE00001323088.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119759.1";
mm10-chrY	HAVANA	exon	65750742	65750783	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000191130.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "processed_transcript"; transcript_name "Gm29586-208"; exon_number 4; exon_id "ENSMUSE00001335105.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119759.1";
mm10-chrY	HAVANA	transcript	65752800	65753414	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000189745.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29586-207"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119761.1";
mm10-chrY	HAVANA	exon	65752800	65753414	.	-	.	gene_id "ENSMUSG00000101177.6"; transcript_id "ENSMUST00000189745.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29586"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29586-207"; exon_number 1; exon_id "ENSMUSE00001321898.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045814.2"; havana_transcript "OTTMUST00000119761.1";
mm10-chrY	HAVANA	gene	65789555	65790250	.	-	.	gene_id "ENSMUSG00000100993.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21895"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045819.1";
mm10-chrY	HAVANA	transcript	65789555	65790250	.	-	.	gene_id "ENSMUSG00000100993.1"; transcript_id "ENSMUST00000189997.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21895"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21895-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045819.1"; havana_transcript "OTTMUST00000119784.1";
mm10-chrY	HAVANA	exon	65789555	65790250	.	-	.	gene_id "ENSMUSG00000100993.1"; transcript_id "ENSMUST00000189997.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21895"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21895-201"; exon_number 1; exon_id "ENSMUSE00001333510.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045819.1"; havana_transcript "OTTMUST00000119784.1";
mm10-chrY	HAVANA	gene	65796354	65799698	.	-	.	gene_id "ENSMUSG00000099778.1"; gene_type "lincRNA"; gene_name "Gm28134"; level 2; havana_gene "OTTMUSG00000045820.1";
mm10-chrY	HAVANA	transcript	65796354	65799698	.	-	.	gene_id "ENSMUSG00000099778.1"; transcript_id "ENSMUST00000188690.1"; gene_type "lincRNA"; gene_name "Gm28134"; transcript_type "lincRNA"; transcript_name "Gm28134-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045820.1"; havana_transcript "OTTMUST00000119785.1";
mm10-chrY	HAVANA	exon	65799476	65799698	.	-	.	gene_id "ENSMUSG00000099778.1"; transcript_id "ENSMUST00000188690.1"; gene_type "lincRNA"; gene_name "Gm28134"; transcript_type "lincRNA"; transcript_name "Gm28134-201"; exon_number 1; exon_id "ENSMUSE00001325076.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045820.1"; havana_transcript "OTTMUST00000119785.1";
mm10-chrY	HAVANA	exon	65796354	65798296	.	-	.	gene_id "ENSMUSG00000099778.1"; transcript_id "ENSMUST00000188690.1"; gene_type "lincRNA"; gene_name "Gm28134"; transcript_type "lincRNA"; transcript_name "Gm28134-201"; exon_number 2; exon_id "ENSMUSE00001331228.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045820.1"; havana_transcript "OTTMUST00000119785.1";
mm10-chrY	HAVANA	gene	65831727	65834966	.	+	.	gene_id "ENSMUSG00000101512.1"; gene_type "lincRNA"; gene_name "Gm28135"; level 2; havana_gene "OTTMUSG00000045821.1";
mm10-chrY	HAVANA	transcript	65831727	65834966	.	+	.	gene_id "ENSMUSG00000101512.1"; transcript_id "ENSMUST00000186847.1"; gene_type "lincRNA"; gene_name "Gm28135"; transcript_type "lincRNA"; transcript_name "Gm28135-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045821.1"; havana_transcript "OTTMUST00000119786.1";
mm10-chrY	HAVANA	exon	65831727	65832367	.	+	.	gene_id "ENSMUSG00000101512.1"; transcript_id "ENSMUST00000186847.1"; gene_type "lincRNA"; gene_name "Gm28135"; transcript_type "lincRNA"; transcript_name "Gm28135-201"; exon_number 1; exon_id "ENSMUSE00001320426.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045821.1"; havana_transcript "OTTMUST00000119786.1";
mm10-chrY	HAVANA	exon	65832853	65833038	.	+	.	gene_id "ENSMUSG00000101512.1"; transcript_id "ENSMUST00000186847.1"; gene_type "lincRNA"; gene_name "Gm28135"; transcript_type "lincRNA"; transcript_name "Gm28135-201"; exon_number 2; exon_id "ENSMUSE00001328199.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045821.1"; havana_transcript "OTTMUST00000119786.1";
mm10-chrY	HAVANA	exon	65833768	65833950	.	+	.	gene_id "ENSMUSG00000101512.1"; transcript_id "ENSMUST00000186847.1"; gene_type "lincRNA"; gene_name "Gm28135"; transcript_type "lincRNA"; transcript_name "Gm28135-201"; exon_number 3; exon_id "ENSMUSE00001331330.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045821.1"; havana_transcript "OTTMUST00000119786.1";
mm10-chrY	HAVANA	exon	65834478	65834966	.	+	.	gene_id "ENSMUSG00000101512.1"; transcript_id "ENSMUST00000186847.1"; gene_type "lincRNA"; gene_name "Gm28135"; transcript_type "lincRNA"; transcript_name "Gm28135-201"; exon_number 4; exon_id "ENSMUSE00001318766.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045821.1"; havana_transcript "OTTMUST00000119786.1";
mm10-chrY	HAVANA	transcript	65832180	65834546	.	+	.	gene_id "ENSMUSG00000101512.1"; transcript_id "ENSMUST00000189530.1"; gene_type "lincRNA"; gene_name "Gm28135"; transcript_type "lincRNA"; transcript_name "Gm28135-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045821.1"; havana_transcript "OTTMUST00000119787.1";
mm10-chrY	HAVANA	exon	65832180	65832367	.	+	.	gene_id "ENSMUSG00000101512.1"; transcript_id "ENSMUST00000189530.1"; gene_type "lincRNA"; gene_name "Gm28135"; transcript_type "lincRNA"; transcript_name "Gm28135-202"; exon_number 1; exon_id "ENSMUSE00001334146.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045821.1"; havana_transcript "OTTMUST00000119787.1";
mm10-chrY	HAVANA	exon	65832857	65833038	.	+	.	gene_id "ENSMUSG00000101512.1"; transcript_id "ENSMUST00000189530.1"; gene_type "lincRNA"; gene_name "Gm28135"; transcript_type "lincRNA"; transcript_name "Gm28135-202"; exon_number 2; exon_id "ENSMUSE00001319838.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045821.1"; havana_transcript "OTTMUST00000119787.1";
mm10-chrY	HAVANA	exon	65834478	65834546	.	+	.	gene_id "ENSMUSG00000101512.1"; transcript_id "ENSMUST00000189530.1"; gene_type "lincRNA"; gene_name "Gm28135"; transcript_type "lincRNA"; transcript_name "Gm28135-202"; exon_number 3; exon_id "ENSMUSE00001321268.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045821.1"; havana_transcript "OTTMUST00000119787.1";
mm10-chrY	HAVANA	gene	65939270	65939962	.	-	.	gene_id "ENSMUSG00000100136.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20933"; level 2; havana_gene "OTTMUSG00000045822.1";
mm10-chrY	HAVANA	transcript	65939270	65939962	.	-	.	gene_id "ENSMUSG00000100136.1"; transcript_id "ENSMUST00000187070.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20933"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20933-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045822.1"; havana_transcript "OTTMUST00000119788.1";
mm10-chrY	HAVANA	exon	65939270	65939962	.	-	.	gene_id "ENSMUSG00000100136.1"; transcript_id "ENSMUST00000187070.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20933"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20933-201"; exon_number 1; exon_id "ENSMUSE00001322413.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045822.1"; havana_transcript "OTTMUST00000119788.1";
mm10-chrY	HAVANA	gene	66079007	66081905	.	-	.	gene_id "ENSMUSG00000101256.1"; gene_type "lincRNA"; gene_name "Gm28133"; level 2; havana_gene "OTTMUSG00000045823.1";
mm10-chrY	HAVANA	transcript	66079007	66081905	.	-	.	gene_id "ENSMUSG00000101256.1"; transcript_id "ENSMUST00000191344.1"; gene_type "lincRNA"; gene_name "Gm28133"; transcript_type "lincRNA"; transcript_name "Gm28133-204"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045823.1"; havana_transcript "OTTMUST00000119789.1";
mm10-chrY	HAVANA	exon	66081610	66081905	.	-	.	gene_id "ENSMUSG00000101256.1"; transcript_id "ENSMUST00000191344.1"; gene_type "lincRNA"; gene_name "Gm28133"; transcript_type "lincRNA"; transcript_name "Gm28133-204"; exon_number 1; exon_id "ENSMUSE00001320809.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045823.1"; havana_transcript "OTTMUST00000119789.1";
mm10-chrY	HAVANA	exon	66080939	66081124	.	-	.	gene_id "ENSMUSG00000101256.1"; transcript_id "ENSMUST00000191344.1"; gene_type "lincRNA"; gene_name "Gm28133"; transcript_type "lincRNA"; transcript_name "Gm28133-204"; exon_number 2; exon_id "ENSMUSE00001318442.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045823.1"; havana_transcript "OTTMUST00000119789.1";
mm10-chrY	HAVANA	exon	66080026	66080209	.	-	.	gene_id "ENSMUSG00000101256.1"; transcript_id "ENSMUST00000191344.1"; gene_type "lincRNA"; gene_name "Gm28133"; transcript_type "lincRNA"; transcript_name "Gm28133-204"; exon_number 3; exon_id "ENSMUSE00001329359.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045823.1"; havana_transcript "OTTMUST00000119789.1";
mm10-chrY	HAVANA	exon	66079007	66079498	.	-	.	gene_id "ENSMUSG00000101256.1"; transcript_id "ENSMUST00000191344.1"; gene_type "lincRNA"; gene_name "Gm28133"; transcript_type "lincRNA"; transcript_name "Gm28133-204"; exon_number 4; exon_id "ENSMUSE00001333083.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045823.1"; havana_transcript "OTTMUST00000119789.1";
mm10-chrY	HAVANA	transcript	66079430	66081796	.	-	.	gene_id "ENSMUSG00000101256.1"; transcript_id "ENSMUST00000189123.1"; gene_type "lincRNA"; gene_name "Gm28133"; transcript_type "lincRNA"; transcript_name "Gm28133-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045823.1"; havana_transcript "OTTMUST00000119790.1";
mm10-chrY	HAVANA	exon	66081610	66081796	.	-	.	gene_id "ENSMUSG00000101256.1"; transcript_id "ENSMUST00000189123.1"; gene_type "lincRNA"; gene_name "Gm28133"; transcript_type "lincRNA"; transcript_name "Gm28133-203"; exon_number 1; exon_id "ENSMUSE00001325860.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045823.1"; havana_transcript "OTTMUST00000119790.1";
mm10-chrY	HAVANA	exon	66080939	66081120	.	-	.	gene_id "ENSMUSG00000101256.1"; transcript_id "ENSMUST00000189123.1"; gene_type "lincRNA"; gene_name "Gm28133"; transcript_type "lincRNA"; transcript_name "Gm28133-203"; exon_number 2; exon_id "ENSMUSE00001333227.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045823.1"; havana_transcript "OTTMUST00000119790.1";
mm10-chrY	HAVANA	exon	66079430	66079498	.	-	.	gene_id "ENSMUSG00000101256.1"; transcript_id "ENSMUST00000189123.1"; gene_type "lincRNA"; gene_name "Gm28133"; transcript_type "lincRNA"; transcript_name "Gm28133-203"; exon_number 3; exon_id "ENSMUSE00001322478.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045823.1"; havana_transcript "OTTMUST00000119790.1";
mm10-chrY	HAVANA	gene	66079219	66085944	.	+	.	gene_id "ENSMUSG00000101758.1"; gene_type "lincRNA"; gene_name "Gm28137"; level 2; havana_gene "OTTMUSG00000045824.1";
mm10-chrY	HAVANA	transcript	66079219	66085944	.	+	.	gene_id "ENSMUSG00000101758.1"; transcript_id "ENSMUST00000191478.1"; gene_type "lincRNA"; gene_name "Gm28137"; transcript_type "lincRNA"; transcript_name "Gm28137-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045824.1"; havana_transcript "OTTMUST00000119791.1";
mm10-chrY	HAVANA	exon	66079219	66079379	.	+	.	gene_id "ENSMUSG00000101758.1"; transcript_id "ENSMUST00000191478.1"; gene_type "lincRNA"; gene_name "Gm28137"; transcript_type "lincRNA"; transcript_name "Gm28137-202"; exon_number 1; exon_id "ENSMUSE00001320704.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045824.1"; havana_transcript "OTTMUST00000119791.1";
mm10-chrY	HAVANA	exon	66084297	66084388	.	+	.	gene_id "ENSMUSG00000101758.1"; transcript_id "ENSMUST00000191478.1"; gene_type "lincRNA"; gene_name "Gm28137"; transcript_type "lincRNA"; transcript_name "Gm28137-202"; exon_number 2; exon_id "ENSMUSE00001333355.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045824.1"; havana_transcript "OTTMUST00000119791.1";
mm10-chrY	HAVANA	exon	66085782	66085944	.	+	.	gene_id "ENSMUSG00000101758.1"; transcript_id "ENSMUST00000191478.1"; gene_type "lincRNA"; gene_name "Gm28137"; transcript_type "lincRNA"; transcript_name "Gm28137-202"; exon_number 3; exon_id "ENSMUSE00001326485.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045824.1"; havana_transcript "OTTMUST00000119791.1";
mm10-chrY	HAVANA	gene	66114135	66117482	.	+	.	gene_id "ENSMUSG00000099395.1"; gene_type "lincRNA"; gene_name "Gm28138"; level 2; havana_gene "OTTMUSG00000045825.1";
mm10-chrY	HAVANA	transcript	66114135	66117482	.	+	.	gene_id "ENSMUSG00000099395.1"; transcript_id "ENSMUST00000186250.1"; gene_type "lincRNA"; gene_name "Gm28138"; transcript_type "lincRNA"; transcript_name "Gm28138-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045825.1"; havana_transcript "OTTMUST00000119792.1";
mm10-chrY	HAVANA	exon	66114135	66114357	.	+	.	gene_id "ENSMUSG00000099395.1"; transcript_id "ENSMUST00000186250.1"; gene_type "lincRNA"; gene_name "Gm28138"; transcript_type "lincRNA"; transcript_name "Gm28138-201"; exon_number 1; exon_id "ENSMUSE00001318869.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045825.1"; havana_transcript "OTTMUST00000119792.1";
mm10-chrY	HAVANA	exon	66115539	66117482	.	+	.	gene_id "ENSMUSG00000099395.1"; transcript_id "ENSMUST00000186250.1"; gene_type "lincRNA"; gene_name "Gm28138"; transcript_type "lincRNA"; transcript_name "Gm28138-201"; exon_number 2; exon_id "ENSMUSE00001328093.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045825.1"; havana_transcript "OTTMUST00000119792.1";
mm10-chrY	HAVANA	gene	66123576	66124271	.	+	.	gene_id "ENSMUSG00000100982.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21837"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045826.1";
mm10-chrY	HAVANA	transcript	66123576	66124271	.	+	.	gene_id "ENSMUSG00000100982.1"; transcript_id "ENSMUST00000188117.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21837"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21837-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045826.1"; havana_transcript "OTTMUST00000119793.1";
mm10-chrY	HAVANA	exon	66123576	66124271	.	+	.	gene_id "ENSMUSG00000100982.1"; transcript_id "ENSMUST00000188117.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21837"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21837-201"; exon_number 1; exon_id "ENSMUSE00001331736.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045826.1"; havana_transcript "OTTMUST00000119793.1";
mm10-chrY	HAVANA	gene	66158903	66169041	.	+	.	gene_id "ENSMUSG00000100988.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045827.1";
mm10-chrY	HAVANA	transcript	66158903	66169041	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000189800.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-216"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119794.1";
mm10-chrY	HAVANA	exon	66158903	66159038	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000189800.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-216"; exon_number 1; exon_id "ENSMUSE00001331513.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119794.1";
mm10-chrY	HAVANA	exon	66160914	66161044	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000189800.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-216"; exon_number 2; exon_id "ENSMUSE00001328369.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119794.1";
mm10-chrY	HAVANA	exon	66161529	66161746	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000189800.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-216"; exon_number 3; exon_id "ENSMUSE00001320842.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119794.1";
mm10-chrY	HAVANA	exon	66162441	66162624	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000189800.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-216"; exon_number 4; exon_id "ENSMUSE00001330480.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119794.1";
mm10-chrY	HAVANA	exon	66168312	66168445	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000189800.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-216"; exon_number 5; exon_id "ENSMUSE00001335654.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119794.1";
mm10-chrY	HAVANA	exon	66168741	66169041	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000189800.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-216"; exon_number 6; exon_id "ENSMUSE00001325564.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119794.1";
mm10-chrY	HAVANA	transcript	66158959	66163181	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188388.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-213"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119795.1";
mm10-chrY	HAVANA	exon	66158959	66159038	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188388.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-213"; exon_number 1; exon_id "ENSMUSE00001328032.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119795.1";
mm10-chrY	HAVANA	exon	66160367	66160603	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188388.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-213"; exon_number 2; exon_id "ENSMUSE00001321395.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119795.1";
mm10-chrY	HAVANA	exon	66162441	66162624	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188388.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-213"; exon_number 3; exon_id "ENSMUSE00001330480.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119795.1";
mm10-chrY	HAVANA	exon	66163140	66163181	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188388.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-213"; exon_number 4; exon_id "ENSMUSE00001328969.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119795.1";
mm10-chrY	HAVANA	transcript	66158960	66163184	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000185551.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-211"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119796.1";
mm10-chrY	HAVANA	exon	66158960	66159038	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000185551.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-211"; exon_number 1; exon_id "ENSMUSE00001328917.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119796.1";
mm10-chrY	HAVANA	exon	66160914	66161044	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000185551.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-211"; exon_number 2; exon_id "ENSMUSE00001328369.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119796.1";
mm10-chrY	HAVANA	exon	66163140	66163184	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000185551.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-211"; exon_number 3; exon_id "ENSMUSE00001321557.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119796.1";
mm10-chrY	HAVANA	transcript	66158991	66163209	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188567.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-214"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119797.1";
mm10-chrY	HAVANA	exon	66158991	66159038	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188567.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-214"; exon_number 1; exon_id "ENSMUSE00001324764.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119797.1";
mm10-chrY	HAVANA	exon	66162441	66162624	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188567.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-214"; exon_number 2; exon_id "ENSMUSE00001330480.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119797.1";
mm10-chrY	HAVANA	exon	66163140	66163209	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188567.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-214"; exon_number 3; exon_id "ENSMUSE00001322182.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119797.1";
mm10-chrY	HAVANA	transcript	66159003	66162583	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190605.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-219"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119798.1";
mm10-chrY	HAVANA	exon	66159003	66159038	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190605.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-219"; exon_number 1; exon_id "ENSMUSE00001325030.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119798.1";
mm10-chrY	HAVANA	exon	66161529	66161746	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190605.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-219"; exon_number 2; exon_id "ENSMUSE00001320842.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119798.1";
mm10-chrY	HAVANA	exon	66162441	66162583	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190605.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-219"; exon_number 3; exon_id "ENSMUSE00001320236.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119798.1";
mm10-chrY	HAVANA	transcript	66160510	66161124	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000191432.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28136-220"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119799.1";
mm10-chrY	HAVANA	exon	66160510	66161124	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000191432.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28136-220"; exon_number 1; exon_id "ENSMUSE00001330244.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119799.1";
mm10-chrY	HAVANA	transcript	66160947	66162528	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000189396.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-215"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119800.1";
mm10-chrY	HAVANA	exon	66160947	66161044	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000189396.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-215"; exon_number 1; exon_id "ENSMUSE00001331169.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119800.1";
mm10-chrY	HAVANA	exon	66161704	66161746	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000189396.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-215"; exon_number 2; exon_id "ENSMUSE00001321085.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119800.1";
mm10-chrY	HAVANA	exon	66162441	66162528	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000189396.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-215"; exon_number 3; exon_id "ENSMUSE00001328315.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119800.1";
mm10-chrY	HAVANA	transcript	66160947	66163181	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190093.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-217"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119801.1";
mm10-chrY	HAVANA	exon	66160947	66161044	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190093.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-217"; exon_number 1; exon_id "ENSMUSE00001331169.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119801.1";
mm10-chrY	HAVANA	exon	66161529	66161746	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190093.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-217"; exon_number 2; exon_id "ENSMUSE00001320842.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119801.1";
mm10-chrY	HAVANA	exon	66162441	66162624	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190093.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-217"; exon_number 3; exon_id "ENSMUSE00001330480.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119801.1";
mm10-chrY	HAVANA	exon	66163140	66163181	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190093.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-217"; exon_number 4; exon_id "ENSMUSE00001328969.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119801.1";
mm10-chrY	HAVANA	transcript	66160947	66163184	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190098.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-218"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119802.1";
mm10-chrY	HAVANA	exon	66160947	66161044	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190098.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-218"; exon_number 1; exon_id "ENSMUSE00001331169.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119802.1";
mm10-chrY	HAVANA	exon	66162441	66162624	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190098.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-218"; exon_number 2; exon_id "ENSMUSE00001330480.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119802.1";
mm10-chrY	HAVANA	exon	66163140	66163184	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000190098.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-218"; exon_number 3; exon_id "ENSMUSE00001321557.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119802.1";
mm10-chrY	HAVANA	transcript	66162442	66163631	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188083.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-212"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119803.1";
mm10-chrY	HAVANA	exon	66162442	66162624	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188083.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-212"; exon_number 1; exon_id "ENSMUSE00001321457.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119803.1";
mm10-chrY	HAVANA	exon	66163140	66163631	.	+	.	gene_id "ENSMUSG00000100988.6"; transcript_id "ENSMUST00000188083.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28136"; transcript_type "processed_transcript"; transcript_name "Gm28136-212"; exon_number 2; exon_id "ENSMUSE00001320611.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045827.1"; havana_transcript "OTTMUST00000119803.1";
mm10-chrY	HAVANA	gene	66338549	66339244	.	+	.	gene_id "ENSMUSG00000099368.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21910"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045842.1";
mm10-chrY	HAVANA	transcript	66338549	66339244	.	+	.	gene_id "ENSMUSG00000099368.1"; transcript_id "ENSMUST00000191163.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21910"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21910-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045842.1"; havana_transcript "OTTMUST00000119818.1";
mm10-chrY	HAVANA	exon	66338549	66339244	.	+	.	gene_id "ENSMUSG00000099368.1"; transcript_id "ENSMUST00000191163.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21910"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21910-201"; exon_number 1; exon_id "ENSMUSE00001335503.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045842.1"; havana_transcript "OTTMUST00000119818.1";
mm10-chrY	HAVANA	gene	66373890	66378615	.	+	.	gene_id "ENSMUSG00000101032.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045843.1";
mm10-chrY	HAVANA	transcript	66373890	66378615	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000185892.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119819.1";
mm10-chrY	HAVANA	exon	66373890	66374025	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000185892.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-201"; exon_number 1; exon_id "ENSMUSE00001321671.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119819.1";
mm10-chrY	HAVANA	exon	66375897	66376027	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000185892.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-201"; exon_number 2; exon_id "ENSMUSE00001334674.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119819.1";
mm10-chrY	HAVANA	exon	66376512	66376729	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000185892.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-201"; exon_number 3; exon_id "ENSMUSE00001335722.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119819.1";
mm10-chrY	HAVANA	exon	66377425	66377608	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000185892.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-201"; exon_number 4; exon_id "ENSMUSE00001320799.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119819.1";
mm10-chrY	HAVANA	exon	66378124	66378615	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000185892.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-201"; exon_number 5; exon_id "ENSMUSE00001324877.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119819.1";
mm10-chrY	HAVANA	transcript	66373974	66378193	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000189852.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119820.1";
mm10-chrY	HAVANA	exon	66373974	66374025	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000189852.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-206"; exon_number 1; exon_id "ENSMUSE00001323303.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119820.1";
mm10-chrY	HAVANA	exon	66375350	66375586	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000189852.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-206"; exon_number 2; exon_id "ENSMUSE00001332444.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119820.1";
mm10-chrY	HAVANA	exon	66377425	66377608	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000189852.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-206"; exon_number 3; exon_id "ENSMUSE00001320799.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119820.1";
mm10-chrY	HAVANA	exon	66378124	66378193	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000189852.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-206"; exon_number 4; exon_id "ENSMUSE00001321912.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119820.1";
mm10-chrY	HAVANA	transcript	66373976	66378193	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000190756.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-207"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119821.1";
mm10-chrY	HAVANA	exon	66373976	66374025	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000190756.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-207"; exon_number 1; exon_id "ENSMUSE00001332739.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119821.1";
mm10-chrY	HAVANA	exon	66378124	66378193	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000190756.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-207"; exon_number 2; exon_id "ENSMUSE00001321912.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119821.1";
mm10-chrY	HAVANA	transcript	66373978	66378193	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000189415.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-204"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119822.1";
mm10-chrY	HAVANA	exon	66373978	66374025	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000189415.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-204"; exon_number 1; exon_id "ENSMUSE00001327455.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119822.1";
mm10-chrY	HAVANA	exon	66375897	66376027	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000189415.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-204"; exon_number 2; exon_id "ENSMUSE00001334674.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119822.1";
mm10-chrY	HAVANA	exon	66378124	66378193	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000189415.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-204"; exon_number 3; exon_id "ENSMUSE00001321912.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119822.1";
mm10-chrY	HAVANA	transcript	66373978	66378193	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000186058.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119823.1";
mm10-chrY	HAVANA	exon	66373978	66374025	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000186058.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-202"; exon_number 1; exon_id "ENSMUSE00001327455.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119823.1";
mm10-chrY	HAVANA	exon	66377425	66377608	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000186058.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-202"; exon_number 2; exon_id "ENSMUSE00001320799.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119823.1";
mm10-chrY	HAVANA	exon	66378124	66378193	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000186058.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-202"; exon_number 3; exon_id "ENSMUSE00001321912.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119823.1";
mm10-chrY	HAVANA	transcript	66375493	66376107	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000189603.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29377-205"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119824.1";
mm10-chrY	HAVANA	exon	66375493	66376107	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000189603.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29377-205"; exon_number 1; exon_id "ENSMUSE00001324260.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119824.1";
mm10-chrY	HAVANA	transcript	66375930	66377512	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000190996.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-208"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119825.1";
mm10-chrY	HAVANA	exon	66375930	66376027	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000190996.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-208"; exon_number 1; exon_id "ENSMUSE00001322305.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119825.1";
mm10-chrY	HAVANA	exon	66376687	66376729	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000190996.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-208"; exon_number 2; exon_id "ENSMUSE00001331924.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119825.1";
mm10-chrY	HAVANA	exon	66377425	66377512	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000190996.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-208"; exon_number 3; exon_id "ENSMUSE00001325249.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119825.1";
mm10-chrY	HAVANA	transcript	66375930	66378168	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000186963.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119826.1";
mm10-chrY	HAVANA	exon	66375930	66376027	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000186963.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-203"; exon_number 1; exon_id "ENSMUSE00001322305.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119826.1";
mm10-chrY	HAVANA	exon	66377425	66377608	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000186963.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-203"; exon_number 2; exon_id "ENSMUSE00001320799.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119826.1";
mm10-chrY	HAVANA	exon	66378124	66378168	.	+	.	gene_id "ENSMUSG00000101032.6"; transcript_id "ENSMUST00000186963.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29377"; transcript_type "processed_transcript"; transcript_name "Gm29377-203"; exon_number 3; exon_id "ENSMUSE00001332741.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045843.1"; havana_transcript "OTTMUST00000119826.1";
mm10-chrY	HAVANA	gene	66407337	66408031	.	+	.	gene_id "ENSMUSG00000101010.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21889"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045844.1";
mm10-chrY	HAVANA	transcript	66407337	66408031	.	+	.	gene_id "ENSMUSG00000101010.1"; transcript_id "ENSMUST00000188487.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21889"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21889-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045844.1"; havana_transcript "OTTMUST00000119827.1";
mm10-chrY	HAVANA	exon	66407337	66408031	.	+	.	gene_id "ENSMUSG00000101010.1"; transcript_id "ENSMUST00000188487.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21889"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21889-201"; exon_number 1; exon_id "ENSMUSE00001327943.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045844.1"; havana_transcript "OTTMUST00000119827.1";
mm10-chrY	HAVANA	gene	66517962	66518276	.	-	.	gene_id "ENSMUSG00000100447.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29378"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045846.1";
mm10-chrY	HAVANA	transcript	66517962	66518276	.	-	.	gene_id "ENSMUSG00000100447.1"; transcript_id "ENSMUST00000188723.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29378"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29378-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045846.1"; havana_transcript "OTTMUST00000119829.1";
mm10-chrY	HAVANA	exon	66517962	66518276	.	-	.	gene_id "ENSMUSG00000100447.1"; transcript_id "ENSMUST00000188723.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29378"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29378-201"; exon_number 1; exon_id "ENSMUSE00001323532.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045846.1"; havana_transcript "OTTMUST00000119829.1";
mm10-chrY	HAVANA	gene	66519692	66523034	.	-	.	gene_id "ENSMUSG00000100607.1"; gene_type "lincRNA"; gene_name "Gm29379"; level 2; havana_gene "OTTMUSG00000045847.1";
mm10-chrY	HAVANA	transcript	66519692	66523034	.	-	.	gene_id "ENSMUSG00000100607.1"; transcript_id "ENSMUST00000186305.1"; gene_type "lincRNA"; gene_name "Gm29379"; transcript_type "lincRNA"; transcript_name "Gm29379-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045847.1"; havana_transcript "OTTMUST00000119830.1";
mm10-chrY	HAVANA	exon	66522812	66523034	.	-	.	gene_id "ENSMUSG00000100607.1"; transcript_id "ENSMUST00000186305.1"; gene_type "lincRNA"; gene_name "Gm29379"; transcript_type "lincRNA"; transcript_name "Gm29379-201"; exon_number 1; exon_id "ENSMUSE00001331934.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045847.1"; havana_transcript "OTTMUST00000119830.1";
mm10-chrY	HAVANA	exon	66519692	66521634	.	-	.	gene_id "ENSMUSG00000100607.1"; transcript_id "ENSMUST00000186305.1"; gene_type "lincRNA"; gene_name "Gm29379"; transcript_type "lincRNA"; transcript_name "Gm29379-201"; exon_number 2; exon_id "ENSMUSE00001323746.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045847.1"; havana_transcript "OTTMUST00000119830.1";
mm10-chrY	HAVANA	gene	66551277	66558067	.	-	.	gene_id "ENSMUSG00000099829.1"; gene_type "lincRNA"; gene_name "Gm29380"; level 2; havana_gene "OTTMUSG00000045848.1";
mm10-chrY	HAVANA	transcript	66551277	66558067	.	-	.	gene_id "ENSMUSG00000099829.1"; transcript_id "ENSMUST00000185898.1"; gene_type "lincRNA"; gene_name "Gm29380"; transcript_type "lincRNA"; transcript_name "Gm29380-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045848.1"; havana_transcript "OTTMUST00000119831.1";
mm10-chrY	HAVANA	exon	66557907	66558067	.	-	.	gene_id "ENSMUSG00000099829.1"; transcript_id "ENSMUST00000185898.1"; gene_type "lincRNA"; gene_name "Gm29380"; transcript_type "lincRNA"; transcript_name "Gm29380-201"; exon_number 1; exon_id "ENSMUSE00001332723.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045848.1"; havana_transcript "OTTMUST00000119831.1";
mm10-chrY	HAVANA	exon	66552831	66552922	.	-	.	gene_id "ENSMUSG00000099829.1"; transcript_id "ENSMUST00000185898.1"; gene_type "lincRNA"; gene_name "Gm29380"; transcript_type "lincRNA"; transcript_name "Gm29380-201"; exon_number 2; exon_id "ENSMUSE00001321992.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045848.1"; havana_transcript "OTTMUST00000119831.1";
mm10-chrY	HAVANA	exon	66551277	66551439	.	-	.	gene_id "ENSMUSG00000099829.1"; transcript_id "ENSMUST00000185898.1"; gene_type "lincRNA"; gene_name "Gm29380"; transcript_type "lincRNA"; transcript_name "Gm29380-201"; exon_number 3; exon_id "ENSMUSE00001326621.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045848.1"; havana_transcript "OTTMUST00000119831.1";
mm10-chrY	HAVANA	gene	66555040	66558276	.	+	.	gene_id "ENSMUSG00000101278.1"; gene_type "lincRNA"; gene_name "Gm29381"; level 2; havana_gene "OTTMUSG00000045849.1";
mm10-chrY	HAVANA	transcript	66555040	66558276	.	+	.	gene_id "ENSMUSG00000101278.1"; transcript_id "ENSMUST00000190168.1"; gene_type "lincRNA"; gene_name "Gm29381"; transcript_type "lincRNA"; transcript_name "Gm29381-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045849.1"; havana_transcript "OTTMUST00000119832.1";
mm10-chrY	HAVANA	exon	66555040	66555677	.	+	.	gene_id "ENSMUSG00000101278.1"; transcript_id "ENSMUST00000190168.1"; gene_type "lincRNA"; gene_name "Gm29381"; transcript_type "lincRNA"; transcript_name "Gm29381-201"; exon_number 1; exon_id "ENSMUSE00001319016.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045849.1"; havana_transcript "OTTMUST00000119832.1";
mm10-chrY	HAVANA	exon	66556163	66556348	.	+	.	gene_id "ENSMUSG00000101278.1"; transcript_id "ENSMUST00000190168.1"; gene_type "lincRNA"; gene_name "Gm29381"; transcript_type "lincRNA"; transcript_name "Gm29381-201"; exon_number 2; exon_id "ENSMUSE00001323398.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045849.1"; havana_transcript "OTTMUST00000119832.1";
mm10-chrY	HAVANA	exon	66557078	66557261	.	+	.	gene_id "ENSMUSG00000101278.1"; transcript_id "ENSMUST00000190168.1"; gene_type "lincRNA"; gene_name "Gm29381"; transcript_type "lincRNA"; transcript_name "Gm29381-201"; exon_number 3; exon_id "ENSMUSE00001319155.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045849.1"; havana_transcript "OTTMUST00000119832.1";
mm10-chrY	HAVANA	exon	66557788	66558276	.	+	.	gene_id "ENSMUSG00000101278.1"; transcript_id "ENSMUST00000190168.1"; gene_type "lincRNA"; gene_name "Gm29381"; transcript_type "lincRNA"; transcript_name "Gm29381-201"; exon_number 4; exon_id "ENSMUSE00001334415.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045849.1"; havana_transcript "OTTMUST00000119832.1";
mm10-chrY	HAVANA	transcript	66555492	66557856	.	+	.	gene_id "ENSMUSG00000101278.1"; transcript_id "ENSMUST00000190475.1"; gene_type "lincRNA"; gene_name "Gm29381"; transcript_type "lincRNA"; transcript_name "Gm29381-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045849.1"; havana_transcript "OTTMUST00000119833.1";
mm10-chrY	HAVANA	exon	66555492	66555677	.	+	.	gene_id "ENSMUSG00000101278.1"; transcript_id "ENSMUST00000190475.1"; gene_type "lincRNA"; gene_name "Gm29381"; transcript_type "lincRNA"; transcript_name "Gm29381-202"; exon_number 1; exon_id "ENSMUSE00001325285.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045849.1"; havana_transcript "OTTMUST00000119833.1";
mm10-chrY	HAVANA	exon	66556167	66556348	.	+	.	gene_id "ENSMUSG00000101278.1"; transcript_id "ENSMUST00000190475.1"; gene_type "lincRNA"; gene_name "Gm29381"; transcript_type "lincRNA"; transcript_name "Gm29381-202"; exon_number 2; exon_id "ENSMUSE00001327453.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045849.1"; havana_transcript "OTTMUST00000119833.1";
mm10-chrY	HAVANA	exon	66557788	66557856	.	+	.	gene_id "ENSMUSG00000101278.1"; transcript_id "ENSMUST00000190475.1"; gene_type "lincRNA"; gene_name "Gm29381"; transcript_type "lincRNA"; transcript_name "Gm29381-202"; exon_number 3; exon_id "ENSMUSE00001331091.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045849.1"; havana_transcript "OTTMUST00000119833.1";
mm10-chrY	HAVANA	gene	66665803	66666497	.	-	.	gene_id "ENSMUSG00000101442.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28795"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045858.1";
mm10-chrY	HAVANA	transcript	66665803	66666497	.	-	.	gene_id "ENSMUSG00000101442.1"; transcript_id "ENSMUST00000185382.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28795"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28795-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045858.1"; havana_transcript "OTTMUST00000119841.1";
mm10-chrY	HAVANA	exon	66665803	66666497	.	-	.	gene_id "ENSMUSG00000101442.1"; transcript_id "ENSMUST00000185382.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28795"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28795-201"; exon_number 1; exon_id "ENSMUSE00001329127.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045858.1"; havana_transcript "OTTMUST00000119841.1";
mm10-chrY	HAVANA	gene	66739787	66742123	.	-	.	gene_id "ENSMUSG00000096666.2"; gene_type "protein_coding"; gene_name "Gm20852"; level 2; havana_gene "OTTMUSG00000045859.2";
mm10-chrY	HAVANA	transcript	66739787	66742123	.	-	.	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000188011.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-202"; level 2; protein_id "ENSMUSP00000140403.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2"; havana_transcript "OTTMUST00000119842.2";
mm10-chrY	HAVANA	exon	66742005	66742123	.	-	.	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000188011.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-202"; exon_number 1; exon_id "ENSMUSE00001330081.1"; level 2; protein_id "ENSMUSP00000140403.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2"; havana_transcript "OTTMUST00000119842.2";
mm10-chrY	HAVANA	exon	66739787	66740891	.	-	.	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000188011.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-202"; exon_number 2; exon_id "ENSMUSE00001319128.1"; level 2; protein_id "ENSMUSP00000140403.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2"; havana_transcript "OTTMUST00000119842.2";
mm10-chrY	HAVANA	CDS	66739930	66740610	.	-	0	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000188011.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-202"; exon_number 2; exon_id "ENSMUSE00001319128.1"; level 2; protein_id "ENSMUSP00000140403.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2"; havana_transcript "OTTMUST00000119842.2";
mm10-chrY	HAVANA	start_codon	66740608	66740610	.	-	0	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000188011.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-202"; exon_number 2; exon_id "ENSMUSE00001319128.1"; level 2; protein_id "ENSMUSP00000140403.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2"; havana_transcript "OTTMUST00000119842.2";
mm10-chrY	HAVANA	stop_codon	66739927	66739929	.	-	0	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000188011.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-202"; exon_number 2; exon_id "ENSMUSE00001319128.1"; level 2; protein_id "ENSMUSP00000140403.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2"; havana_transcript "OTTMUST00000119842.2";
mm10-chrY	HAVANA	UTR	66742005	66742123	.	-	.	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000188011.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-202"; exon_number 1; exon_id "ENSMUSE00001330081.1"; level 2; protein_id "ENSMUSP00000140403.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2"; havana_transcript "OTTMUST00000119842.2";
mm10-chrY	HAVANA	UTR	66739787	66739929	.	-	.	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000188011.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-202"; exon_number 2; exon_id "ENSMUSE00001319128.1"; level 2; protein_id "ENSMUSP00000140403.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2"; havana_transcript "OTTMUST00000119842.2";
mm10-chrY	HAVANA	UTR	66740611	66740891	.	-	.	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000188011.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-202"; exon_number 2; exon_id "ENSMUSE00001319128.1"; level 2; protein_id "ENSMUSP00000140403.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2"; havana_transcript "OTTMUST00000119842.2";
mm10-chrY	ENSEMBL	transcript	66739927	66740610	.	-	.	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000178761.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-201"; level 3; protein_id "ENSMUSP00000135934.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2";
mm10-chrY	ENSEMBL	exon	66739927	66740610	.	-	.	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000178761.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-201"; exon_number 1; exon_id "ENSMUSE00000982961.1"; level 3; protein_id "ENSMUSP00000135934.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2";
mm10-chrY	ENSEMBL	CDS	66739930	66740610	.	-	0	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000178761.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-201"; exon_number 1; exon_id "ENSMUSE00000982961.1"; level 3; protein_id "ENSMUSP00000135934.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2";
mm10-chrY	ENSEMBL	start_codon	66740608	66740610	.	-	0	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000178761.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-201"; exon_number 1; exon_id "ENSMUSE00000982961.1"; level 3; protein_id "ENSMUSP00000135934.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2";
mm10-chrY	ENSEMBL	stop_codon	66739927	66739929	.	-	0	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000178761.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-201"; exon_number 1; exon_id "ENSMUSE00000982961.1"; level 3; protein_id "ENSMUSP00000135934.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2";
mm10-chrY	ENSEMBL	UTR	66739927	66739929	.	-	.	gene_id "ENSMUSG00000096666.2"; transcript_id "ENSMUST00000178761.1"; gene_type "protein_coding"; gene_name "Gm20852"; transcript_type "protein_coding"; transcript_name "Gm20852-201"; exon_number 1; exon_id "ENSMUSE00000982961.1"; level 3; protein_id "ENSMUSP00000135934.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85892.1"; havana_gene "OTTMUSG00000045859.2";
mm10-chrY	HAVANA	gene	66756992	66761183	.	+	.	gene_id "ENSMUSG00000100373.6"; gene_type "lincRNA"; gene_name "Gm29003"; level 2; havana_gene "OTTMUSG00000045860.1";
mm10-chrY	HAVANA	transcript	66756992	66758552	.	+	.	gene_id "ENSMUSG00000100373.6"; transcript_id "ENSMUST00000187769.6"; gene_type "lincRNA"; gene_name "Gm29003"; transcript_type "lincRNA"; transcript_name "Gm29003-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045860.1"; havana_transcript "OTTMUST00000119843.1";
mm10-chrY	HAVANA	exon	66756992	66757053	.	+	.	gene_id "ENSMUSG00000100373.6"; transcript_id "ENSMUST00000187769.6"; gene_type "lincRNA"; gene_name "Gm29003"; transcript_type "lincRNA"; transcript_name "Gm29003-201"; exon_number 1; exon_id "ENSMUSE00001016793.2"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045860.1"; havana_transcript "OTTMUST00000119843.1";
mm10-chrY	HAVANA	exon	66758421	66758552	.	+	.	gene_id "ENSMUSG00000100373.6"; transcript_id "ENSMUST00000187769.6"; gene_type "lincRNA"; gene_name "Gm29003"; transcript_type "lincRNA"; transcript_name "Gm29003-201"; exon_number 2; exon_id "ENSMUSE00001334158.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045860.1"; havana_transcript "OTTMUST00000119843.1";
mm10-chrY	HAVANA	transcript	66756996	66761183	.	+	.	gene_id "ENSMUSG00000100373.6"; transcript_id "ENSMUST00000190434.1"; gene_type "lincRNA"; gene_name "Gm29003"; transcript_type "lincRNA"; transcript_name "Gm29003-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045860.1"; havana_transcript "OTTMUST00000119844.1";
mm10-chrY	HAVANA	exon	66756996	66757231	.	+	.	gene_id "ENSMUSG00000100373.6"; transcript_id "ENSMUST00000190434.1"; gene_type "lincRNA"; gene_name "Gm29003"; transcript_type "lincRNA"; transcript_name "Gm29003-202"; exon_number 1; exon_id "ENSMUSE00001330475.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045860.1"; havana_transcript "OTTMUST00000119844.1";
mm10-chrY	HAVANA	exon	66758421	66758552	.	+	.	gene_id "ENSMUSG00000100373.6"; transcript_id "ENSMUST00000190434.1"; gene_type "lincRNA"; gene_name "Gm29003"; transcript_type "lincRNA"; transcript_name "Gm29003-202"; exon_number 2; exon_id "ENSMUSE00001334158.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045860.1"; havana_transcript "OTTMUST00000119844.1";
mm10-chrY	HAVANA	exon	66761099	66761183	.	+	.	gene_id "ENSMUSG00000100373.6"; transcript_id "ENSMUST00000190434.1"; gene_type "lincRNA"; gene_name "Gm29003"; transcript_type "lincRNA"; transcript_name "Gm29003-202"; exon_number 3; exon_id "ENSMUSE00001325497.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045860.1"; havana_transcript "OTTMUST00000119844.1";
mm10-chrY	HAVANA	gene	66761310	66771942	.	-	.	gene_id "ENSMUSG00000101202.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045861.1";
mm10-chrY	HAVANA	transcript	66761310	66771942	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187886.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-205"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119845.1";
mm10-chrY	HAVANA	exon	66771807	66771942	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187886.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-205"; exon_number 1; exon_id "ENSMUSE00001321212.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119845.1";
mm10-chrY	HAVANA	exon	66769796	66769925	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187886.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-205"; exon_number 2; exon_id "ENSMUSE00001334234.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119845.1";
mm10-chrY	HAVANA	exon	66769094	66769311	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187886.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-205"; exon_number 3; exon_id "ENSMUSE00001331081.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119845.1";
mm10-chrY	HAVANA	exon	66768215	66768398	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187886.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-205"; exon_number 4; exon_id "ENSMUSE00001329981.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119845.1";
mm10-chrY	HAVANA	exon	66762402	66762535	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187886.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-205"; exon_number 5; exon_id "ENSMUSE00001328293.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119845.1";
mm10-chrY	HAVANA	exon	66761310	66762107	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187886.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-205"; exon_number 6; exon_id "ENSMUSE00001321326.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119845.1";
mm10-chrY	HAVANA	transcript	66761807	66771942	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187827.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-204"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119846.1";
mm10-chrY	HAVANA	exon	66771807	66771942	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187827.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-204"; exon_number 1; exon_id "ENSMUSE00001321212.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119846.1";
mm10-chrY	HAVANA	exon	66762402	66762535	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187827.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-204"; exon_number 2; exon_id "ENSMUSE00001328293.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119846.1";
mm10-chrY	HAVANA	exon	66761807	66762107	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187827.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-204"; exon_number 3; exon_id "ENSMUSE00001323896.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119846.1";
mm10-chrY	HAVANA	transcript	66767630	66771885	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187668.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119847.1";
mm10-chrY	HAVANA	exon	66771807	66771885	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187668.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-203"; exon_number 1; exon_id "ENSMUSE00001329817.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119847.1";
mm10-chrY	HAVANA	exon	66768215	66768398	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187668.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-203"; exon_number 2; exon_id "ENSMUSE00001329981.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119847.1";
mm10-chrY	HAVANA	exon	66767630	66767699	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000187668.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-203"; exon_number 3; exon_id "ENSMUSE00001319087.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119847.1";
mm10-chrY	HAVANA	transcript	66767632	66771860	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000186306.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119848.1";
mm10-chrY	HAVANA	exon	66771807	66771860	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000186306.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-202"; exon_number 1; exon_id "ENSMUSE00001331003.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119848.1";
mm10-chrY	HAVANA	exon	66769796	66769925	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000186306.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-202"; exon_number 2; exon_id "ENSMUSE00001334234.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119848.1";
mm10-chrY	HAVANA	exon	66769094	66769311	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000186306.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-202"; exon_number 3; exon_id "ENSMUSE00001331081.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119848.1";
mm10-chrY	HAVANA	exon	66768215	66768398	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000186306.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-202"; exon_number 4; exon_id "ENSMUSE00001329981.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119848.1";
mm10-chrY	HAVANA	exon	66767632	66767699	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000186306.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-202"; exon_number 5; exon_id "ENSMUSE00001319383.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119848.1";
mm10-chrY	HAVANA	transcript	66767658	66771886	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000188477.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119849.1";
mm10-chrY	HAVANA	exon	66771807	66771886	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000188477.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-206"; exon_number 1; exon_id "ENSMUSE00001329136.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119849.1";
mm10-chrY	HAVANA	exon	66770236	66770472	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000188477.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-206"; exon_number 2; exon_id "ENSMUSE00001326283.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119849.1";
mm10-chrY	HAVANA	exon	66768215	66768398	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000188477.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-206"; exon_number 3; exon_id "ENSMUSE00001329981.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119849.1";
mm10-chrY	HAVANA	exon	66767658	66767699	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000188477.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-206"; exon_number 4; exon_id "ENSMUSE00001319295.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119849.1";
mm10-chrY	HAVANA	transcript	66767660	66771885	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000188513.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-207"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119850.1";
mm10-chrY	HAVANA	exon	66771807	66771885	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000188513.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-207"; exon_number 1; exon_id "ENSMUSE00001329817.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119850.1";
mm10-chrY	HAVANA	exon	66767660	66767699	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000188513.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-207"; exon_number 2; exon_id "ENSMUSE00001318641.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119850.1";
mm10-chrY	HAVANA	transcript	66768256	66771842	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000189390.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-208"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119851.1";
mm10-chrY	HAVANA	exon	66771807	66771842	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000189390.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-208"; exon_number 1; exon_id "ENSMUSE00001328699.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119851.1";
mm10-chrY	HAVANA	exon	66769094	66769311	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000189390.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-208"; exon_number 2; exon_id "ENSMUSE00001331081.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119851.1";
mm10-chrY	HAVANA	exon	66768256	66768398	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000189390.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-208"; exon_number 3; exon_id "ENSMUSE00001329397.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119851.1";
mm10-chrY	HAVANA	transcript	66768311	66769893	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000185923.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119852.1";
mm10-chrY	HAVANA	exon	66769796	66769893	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000185923.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-201"; exon_number 1; exon_id "ENSMUSE00001319005.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119852.1";
mm10-chrY	HAVANA	exon	66769094	66769136	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000185923.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-201"; exon_number 2; exon_id "ENSMUSE00001321075.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119852.1";
mm10-chrY	HAVANA	exon	66768311	66768398	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000185923.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "processed_transcript"; transcript_name "Gm28749-201"; exon_number 3; exon_id "ENSMUSE00001327865.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119852.1";
mm10-chrY	HAVANA	transcript	66769716	66770329	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000189599.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28749-209"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119853.1";
mm10-chrY	HAVANA	exon	66769716	66770329	.	-	.	gene_id "ENSMUSG00000101202.6"; transcript_id "ENSMUST00000189599.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28749"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28749-209"; exon_number 1; exon_id "ENSMUSE00001322071.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045861.1"; havana_transcript "OTTMUST00000119853.1";
mm10-chrY	HAVANA	gene	66806564	66807260	.	-	.	gene_id "ENSMUSG00000102077.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29001"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045862.1";
mm10-chrY	HAVANA	transcript	66806564	66807260	.	-	.	gene_id "ENSMUSG00000102077.1"; transcript_id "ENSMUST00000186177.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29001"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29001-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045862.1"; havana_transcript "OTTMUST00000119854.1";
mm10-chrY	HAVANA	exon	66806564	66807260	.	-	.	gene_id "ENSMUSG00000102077.1"; transcript_id "ENSMUST00000186177.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29001"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29001-201"; exon_number 1; exon_id "ENSMUSE00001325255.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045862.1"; havana_transcript "OTTMUST00000119854.1";
mm10-chrY	HAVANA	gene	66971123	66971818	.	-	.	gene_id "ENSMUSG00000099852.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29002"; level 2; havana_gene "OTTMUSG00000045863.1";
mm10-chrY	HAVANA	transcript	66971123	66971818	.	-	.	gene_id "ENSMUSG00000099852.1"; transcript_id "ENSMUST00000188301.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29002"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29002-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045863.1"; havana_transcript "OTTMUST00000119855.1";
mm10-chrY	HAVANA	exon	66971123	66971818	.	-	.	gene_id "ENSMUSG00000099852.1"; transcript_id "ENSMUST00000188301.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29002"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29002-201"; exon_number 1; exon_id "ENSMUSE00001332594.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045863.1"; havana_transcript "OTTMUST00000119855.1";
mm10-chrY	HAVANA	gene	67045743	67048072	.	-	.	gene_id "ENSMUSG00000095302.2"; gene_type "protein_coding"; gene_name "Ssty2"; level 2; havana_gene "OTTMUSG00000045864.2";
mm10-chrY	HAVANA	transcript	67045743	67048072	.	-	.	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000190565.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-202"; level 2; protein_id "ENSMUSP00000139505.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2"; havana_transcript "OTTMUST00000119856.2";
mm10-chrY	HAVANA	exon	67047962	67048072	.	-	.	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000190565.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-202"; exon_number 1; exon_id "ENSMUSE00001029831.1"; level 2; protein_id "ENSMUSP00000139505.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2"; havana_transcript "OTTMUST00000119856.2";
mm10-chrY	HAVANA	exon	67045743	67046847	.	-	.	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000190565.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-202"; exon_number 2; exon_id "ENSMUSE00001321186.1"; level 2; protein_id "ENSMUSP00000139505.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2"; havana_transcript "OTTMUST00000119856.2";
mm10-chrY	HAVANA	CDS	67045886	67046566	.	-	0	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000190565.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-202"; exon_number 2; exon_id "ENSMUSE00001321186.1"; level 2; protein_id "ENSMUSP00000139505.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2"; havana_transcript "OTTMUST00000119856.2";
mm10-chrY	HAVANA	start_codon	67046564	67046566	.	-	0	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000190565.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-202"; exon_number 2; exon_id "ENSMUSE00001321186.1"; level 2; protein_id "ENSMUSP00000139505.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2"; havana_transcript "OTTMUST00000119856.2";
mm10-chrY	HAVANA	stop_codon	67045883	67045885	.	-	0	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000190565.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-202"; exon_number 2; exon_id "ENSMUSE00001321186.1"; level 2; protein_id "ENSMUSP00000139505.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2"; havana_transcript "OTTMUST00000119856.2";
mm10-chrY	HAVANA	UTR	67047962	67048072	.	-	.	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000190565.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-202"; exon_number 1; exon_id "ENSMUSE00001029831.1"; level 2; protein_id "ENSMUSP00000139505.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2"; havana_transcript "OTTMUST00000119856.2";
mm10-chrY	HAVANA	UTR	67045743	67045885	.	-	.	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000190565.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-202"; exon_number 2; exon_id "ENSMUSE00001321186.1"; level 2; protein_id "ENSMUSP00000139505.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2"; havana_transcript "OTTMUST00000119856.2";
mm10-chrY	HAVANA	UTR	67046567	67046847	.	-	.	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000190565.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-202"; exon_number 2; exon_id "ENSMUSE00001321186.1"; level 2; protein_id "ENSMUSP00000139505.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2"; havana_transcript "OTTMUST00000119856.2";
mm10-chrY	ENSEMBL	transcript	67045883	67046566	.	-	.	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000179136.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-201"; level 3; protein_id "ENSMUSP00000137417.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2";
mm10-chrY	ENSEMBL	exon	67045883	67046566	.	-	.	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000179136.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-201"; exon_number 1; exon_id "ENSMUSE00001091358.1"; level 3; protein_id "ENSMUSP00000137417.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2";
mm10-chrY	ENSEMBL	CDS	67045886	67046566	.	-	0	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000179136.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-201"; exon_number 1; exon_id "ENSMUSE00001091358.1"; level 3; protein_id "ENSMUSP00000137417.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2";
mm10-chrY	ENSEMBL	start_codon	67046564	67046566	.	-	0	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000179136.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-201"; exon_number 1; exon_id "ENSMUSE00001091358.1"; level 3; protein_id "ENSMUSP00000137417.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2";
mm10-chrY	ENSEMBL	stop_codon	67045883	67045885	.	-	0	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000179136.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-201"; exon_number 1; exon_id "ENSMUSE00001091358.1"; level 3; protein_id "ENSMUSP00000137417.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2";
mm10-chrY	ENSEMBL	UTR	67045883	67045885	.	-	.	gene_id "ENSMUSG00000095302.2"; transcript_id "ENSMUST00000179136.1"; gene_type "protein_coding"; gene_name "Ssty2"; transcript_type "protein_coding"; transcript_name "Ssty2-201"; exon_number 1; exon_id "ENSMUSE00001091358.1"; level 3; protein_id "ENSMUSP00000137417.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85893.1"; havana_gene "OTTMUSG00000045864.2";
mm10-chrY	HAVANA	gene	67067281	67077900	.	-	.	gene_id "ENSMUSG00000099570.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045865.1";
mm10-chrY	HAVANA	transcript	67067281	67077900	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190932.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-208"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119857.1";
mm10-chrY	HAVANA	exon	67077765	67077900	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190932.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-208"; exon_number 1; exon_id "ENSMUSE00001328395.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119857.1";
mm10-chrY	HAVANA	exon	67075765	67075894	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190932.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-208"; exon_number 2; exon_id "ENSMUSE00001326888.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119857.1";
mm10-chrY	HAVANA	exon	67075063	67075280	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190932.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-208"; exon_number 3; exon_id "ENSMUSE00001335320.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119857.1";
mm10-chrY	HAVANA	exon	67074184	67074367	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190932.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-208"; exon_number 4; exon_id "ENSMUSE00001320631.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119857.1";
mm10-chrY	HAVANA	exon	67068373	67068506	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190932.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-208"; exon_number 5; exon_id "ENSMUSE00001331948.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119857.1";
mm10-chrY	HAVANA	exon	67067281	67068078	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190932.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-208"; exon_number 6; exon_id "ENSMUSE00001325889.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119857.1";
mm10-chrY	HAVANA	transcript	67067778	67077900	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000185562.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119858.1";
mm10-chrY	HAVANA	exon	67077765	67077900	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000185562.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-202"; exon_number 1; exon_id "ENSMUSE00001328395.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119858.1";
mm10-chrY	HAVANA	exon	67068373	67068506	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000185562.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-202"; exon_number 2; exon_id "ENSMUSE00001331948.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119858.1";
mm10-chrY	HAVANA	exon	67067778	67068078	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000185562.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-202"; exon_number 3; exon_id "ENSMUSE00001319057.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119858.1";
mm10-chrY	HAVANA	transcript	67073177	67077900	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190152.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-207"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119859.1";
mm10-chrY	HAVANA	exon	67077765	67077900	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190152.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-207"; exon_number 1; exon_id "ENSMUSE00001328395.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119859.1";
mm10-chrY	HAVANA	exon	67075765	67075894	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190152.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-207"; exon_number 2; exon_id "ENSMUSE00001326888.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119859.1";
mm10-chrY	HAVANA	exon	67075063	67075280	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190152.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-207"; exon_number 3; exon_id "ENSMUSE00001335320.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119859.1";
mm10-chrY	HAVANA	exon	67074184	67074367	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190152.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-207"; exon_number 4; exon_id "ENSMUSE00001320631.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119859.1";
mm10-chrY	HAVANA	exon	67073177	67073668	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000190152.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-207"; exon_number 5; exon_id "ENSMUSE00001323496.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119859.1";
mm10-chrY	HAVANA	transcript	67073599	67077812	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000187095.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119860.1";
mm10-chrY	HAVANA	exon	67077765	67077812	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000187095.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-203"; exon_number 1; exon_id "ENSMUSE00001322367.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119860.1";
mm10-chrY	HAVANA	exon	67075765	67075894	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000187095.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-203"; exon_number 2; exon_id "ENSMUSE00001326888.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119860.1";
mm10-chrY	HAVANA	exon	67073599	67073668	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000187095.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-203"; exon_number 3; exon_id "ENSMUSE00001324702.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119860.1";
mm10-chrY	HAVANA	transcript	67073624	67075862	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000189332.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-205"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119861.1";
mm10-chrY	HAVANA	exon	67075765	67075862	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000189332.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-205"; exon_number 1; exon_id "ENSMUSE00001328763.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119861.1";
mm10-chrY	HAVANA	exon	67074184	67074367	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000189332.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-205"; exon_number 2; exon_id "ENSMUSE00001320631.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119861.1";
mm10-chrY	HAVANA	exon	67073624	67073668	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000189332.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-205"; exon_number 3; exon_id "ENSMUSE00001321720.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119861.1";
mm10-chrY	HAVANA	transcript	67073627	67077844	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000187132.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-204"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119862.1";
mm10-chrY	HAVANA	exon	67077765	67077844	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000187132.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-204"; exon_number 1; exon_id "ENSMUSE00001318246.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119862.1";
mm10-chrY	HAVANA	exon	67076205	67076441	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000187132.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-204"; exon_number 2; exon_id "ENSMUSE00001334418.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119862.1";
mm10-chrY	HAVANA	exon	67074184	67074367	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000187132.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-204"; exon_number 3; exon_id "ENSMUSE00001320631.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119862.1";
mm10-chrY	HAVANA	exon	67073627	67073668	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000187132.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-204"; exon_number 4; exon_id "ENSMUSE00001321551.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119862.1";
mm10-chrY	HAVANA	transcript	67074280	67075862	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000189833.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119863.1";
mm10-chrY	HAVANA	exon	67075765	67075862	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000189833.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-206"; exon_number 1; exon_id "ENSMUSE00001328763.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119863.1";
mm10-chrY	HAVANA	exon	67075063	67075105	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000189833.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-206"; exon_number 2; exon_id "ENSMUSE00001334735.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119863.1";
mm10-chrY	HAVANA	exon	67074280	67074367	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000189833.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "processed_transcript"; transcript_name "Gm29000-206"; exon_number 3; exon_id "ENSMUSE00001335378.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119863.1";
mm10-chrY	HAVANA	transcript	67075685	67076298	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000185444.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29000-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119864.1";
mm10-chrY	HAVANA	exon	67075685	67076298	.	-	.	gene_id "ENSMUSG00000099570.6"; transcript_id "ENSMUST00000185444.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29000"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29000-201"; exon_number 1; exon_id "ENSMUSE00001330233.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045865.1"; havana_transcript "OTTMUST00000119864.1";
mm10-chrY	HAVANA	gene	67112508	67113204	.	-	.	gene_id "ENSMUSG00000100569.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28646"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045885.1";
mm10-chrY	HAVANA	transcript	67112508	67113204	.	-	.	gene_id "ENSMUSG00000100569.1"; transcript_id "ENSMUST00000188220.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28646"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28646-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045885.1"; havana_transcript "OTTMUST00000119886.1";
mm10-chrY	HAVANA	exon	67112508	67113204	.	-	.	gene_id "ENSMUSG00000100569.1"; transcript_id "ENSMUST00000188220.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28646"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28646-201"; exon_number 1; exon_id "ENSMUSE00001326259.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045885.1"; havana_transcript "OTTMUST00000119886.1";
mm10-chrY	HAVANA	gene	67150595	67156992	.	-	.	gene_id "ENSMUSG00000100809.1"; gene_type "lincRNA"; gene_name "Gm28612"; level 2; havana_gene "OTTMUSG00000045886.1";
mm10-chrY	HAVANA	transcript	67150595	67156992	.	-	.	gene_id "ENSMUSG00000100809.1"; transcript_id "ENSMUST00000189214.1"; gene_type "lincRNA"; gene_name "Gm28612"; transcript_type "lincRNA"; transcript_name "Gm28612-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045886.1"; havana_transcript "OTTMUST00000119887.1";
mm10-chrY	HAVANA	exon	67156832	67156992	.	-	.	gene_id "ENSMUSG00000100809.1"; transcript_id "ENSMUST00000189214.1"; gene_type "lincRNA"; gene_name "Gm28612"; transcript_type "lincRNA"; transcript_name "Gm28612-201"; exon_number 1; exon_id "ENSMUSE00001323108.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045886.1"; havana_transcript "OTTMUST00000119887.1";
mm10-chrY	HAVANA	exon	67152154	67152245	.	-	.	gene_id "ENSMUSG00000100809.1"; transcript_id "ENSMUST00000189214.1"; gene_type "lincRNA"; gene_name "Gm28612"; transcript_type "lincRNA"; transcript_name "Gm28612-201"; exon_number 2; exon_id "ENSMUSE00001318505.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045886.1"; havana_transcript "OTTMUST00000119887.1";
mm10-chrY	HAVANA	exon	67150595	67150757	.	-	.	gene_id "ENSMUSG00000100809.1"; transcript_id "ENSMUST00000189214.1"; gene_type "lincRNA"; gene_name "Gm28612"; transcript_type "lincRNA"; transcript_name "Gm28612-201"; exon_number 3; exon_id "ENSMUSE00001328957.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045886.1"; havana_transcript "OTTMUST00000119887.1";
mm10-chrY	HAVANA	gene	67154406	67157201	.	+	.	gene_id "ENSMUSG00000099962.1"; gene_type "lincRNA"; gene_name "Gm28613"; level 2; havana_gene "OTTMUSG00000045887.1";
mm10-chrY	HAVANA	transcript	67154406	67157201	.	+	.	gene_id "ENSMUSG00000099962.1"; transcript_id "ENSMUST00000189627.1"; gene_type "lincRNA"; gene_name "Gm28613"; transcript_type "lincRNA"; transcript_name "Gm28613-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045887.1"; havana_transcript "OTTMUST00000119888.1";
mm10-chrY	HAVANA	exon	67154406	67155002	.	+	.	gene_id "ENSMUSG00000099962.1"; transcript_id "ENSMUST00000189627.1"; gene_type "lincRNA"; gene_name "Gm28613"; transcript_type "lincRNA"; transcript_name "Gm28613-201"; exon_number 1; exon_id "ENSMUSE00001319641.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045887.1"; havana_transcript "OTTMUST00000119888.1";
mm10-chrY	HAVANA	exon	67155045	67155272	.	+	.	gene_id "ENSMUSG00000099962.1"; transcript_id "ENSMUST00000189627.1"; gene_type "lincRNA"; gene_name "Gm28613"; transcript_type "lincRNA"; transcript_name "Gm28613-201"; exon_number 2; exon_id "ENSMUSE00001329464.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045887.1"; havana_transcript "OTTMUST00000119888.1";
mm10-chrY	HAVANA	exon	67156003	67156186	.	+	.	gene_id "ENSMUSG00000099962.1"; transcript_id "ENSMUST00000189627.1"; gene_type "lincRNA"; gene_name "Gm28613"; transcript_type "lincRNA"; transcript_name "Gm28613-201"; exon_number 3; exon_id "ENSMUSE00001318426.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045887.1"; havana_transcript "OTTMUST00000119888.1";
mm10-chrY	HAVANA	exon	67156713	67157201	.	+	.	gene_id "ENSMUSG00000099962.1"; transcript_id "ENSMUST00000189627.1"; gene_type "lincRNA"; gene_name "Gm28613"; transcript_type "lincRNA"; transcript_name "Gm28613-201"; exon_number 4; exon_id "ENSMUSE00001330982.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045887.1"; havana_transcript "OTTMUST00000119888.1";
mm10-chrY	HAVANA	gene	67264488	67265183	.	-	.	gene_id "ENSMUSG00000100547.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28611"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045888.1";
mm10-chrY	HAVANA	transcript	67264488	67265183	.	-	.	gene_id "ENSMUSG00000100547.1"; transcript_id "ENSMUST00000186429.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28611"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28611-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045888.1"; havana_transcript "OTTMUST00000119889.1";
mm10-chrY	HAVANA	exon	67264488	67265183	.	-	.	gene_id "ENSMUSG00000100547.1"; transcript_id "ENSMUST00000186429.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28611"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28611-201"; exon_number 1; exon_id "ENSMUSE00001331313.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045888.1"; havana_transcript "OTTMUST00000119889.1";
mm10-chrY	HAVANA	gene	67339176	67339871	.	-	.	gene_id "ENSMUSG00000099755.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21114"; level 2; havana_gene "OTTMUSG00000045889.1";
mm10-chrY	HAVANA	transcript	67339176	67339871	.	-	.	gene_id "ENSMUSG00000099755.1"; transcript_id "ENSMUST00000191466.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21114"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21114-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045889.1"; havana_transcript "OTTMUST00000119890.1";
mm10-chrY	HAVANA	exon	67339176	67339871	.	-	.	gene_id "ENSMUSG00000099755.1"; transcript_id "ENSMUST00000191466.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21114"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21114-201"; exon_number 1; exon_id "ENSMUSE00001334892.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045889.1"; havana_transcript "OTTMUST00000119890.1";
mm10-chrY	HAVANA	gene	67366350	67371083	.	-	.	gene_id "ENSMUSG00000101686.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045890.2";
mm10-chrY	HAVANA	transcript	67366350	67367539	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000187737.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-204"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119908.1";
mm10-chrY	HAVANA	exon	67367357	67367539	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000187737.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-204"; exon_number 1; exon_id "ENSMUSE00001333424.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119908.1";
mm10-chrY	HAVANA	exon	67366350	67366841	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000187737.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-204"; exon_number 2; exon_id "ENSMUSE00001321878.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119908.1";
mm10-chrY	HAVANA	transcript	67366772	67370997	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000188751.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-205"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119909.1";
mm10-chrY	HAVANA	exon	67370948	67370997	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000188751.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-205"; exon_number 1; exon_id "ENSMUSE00001322958.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119909.1";
mm10-chrY	HAVANA	exon	67366772	67366841	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000188751.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-205"; exon_number 2; exon_id "ENSMUSE00001318648.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119909.1";
mm10-chrY	HAVANA	transcript	67366774	67371083	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000190523.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-207"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119910.1";
mm10-chrY	HAVANA	exon	67370948	67371083	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000190523.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-207"; exon_number 1; exon_id "ENSMUSE00001332968.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119910.1";
mm10-chrY	HAVANA	exon	67368938	67369068	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000190523.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-207"; exon_number 2; exon_id "ENSMUSE00001319735.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119910.1";
mm10-chrY	HAVANA	exon	67368236	67368453	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000190523.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-207"; exon_number 3; exon_id "ENSMUSE00001324520.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119910.1";
mm10-chrY	HAVANA	exon	67367357	67367540	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000190523.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-207"; exon_number 4; exon_id "ENSMUSE00001326428.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119910.1";
mm10-chrY	HAVANA	exon	67366774	67366841	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000190523.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-207"; exon_number 5; exon_id "ENSMUSE00001330601.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119910.1";
mm10-chrY	HAVANA	transcript	67366797	67369035	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000186906.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119911.1";
mm10-chrY	HAVANA	exon	67368938	67369035	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000186906.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-203"; exon_number 1; exon_id "ENSMUSE00001333749.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119911.1";
mm10-chrY	HAVANA	exon	67367357	67367540	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000186906.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-203"; exon_number 2; exon_id "ENSMUSE00001326428.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119911.1";
mm10-chrY	HAVANA	exon	67366797	67366841	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000186906.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-203"; exon_number 3; exon_id "ENSMUSE00001329265.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119911.1";
mm10-chrY	HAVANA	transcript	67366797	67371026	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000185572.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119912.1";
mm10-chrY	HAVANA	exon	67370948	67371026	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000185572.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-201"; exon_number 1; exon_id "ENSMUSE00001326788.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119912.1";
mm10-chrY	HAVANA	exon	67368938	67369068	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000185572.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-201"; exon_number 2; exon_id "ENSMUSE00001319735.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119912.1";
mm10-chrY	HAVANA	exon	67366797	67366841	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000185572.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-201"; exon_number 3; exon_id "ENSMUSE00001329265.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119912.1";
mm10-chrY	HAVANA	transcript	67366800	67371027	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000191172.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-208"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119913.1";
mm10-chrY	HAVANA	exon	67370948	67371027	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000191172.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-208"; exon_number 1; exon_id "ENSMUSE00001320313.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119913.1";
mm10-chrY	HAVANA	exon	67369379	67369615	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000191172.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-208"; exon_number 2; exon_id "ENSMUSE00001326753.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119913.1";
mm10-chrY	HAVANA	exon	67367357	67367540	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000191172.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-208"; exon_number 3; exon_id "ENSMUSE00001326428.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119913.1";
mm10-chrY	HAVANA	exon	67366800	67366841	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000191172.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-208"; exon_number 4; exon_id "ENSMUSE00001330640.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119913.1";
mm10-chrY	HAVANA	transcript	67367396	67371004	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000189561.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119914.1";
mm10-chrY	HAVANA	exon	67370948	67371004	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000189561.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-206"; exon_number 1; exon_id "ENSMUSE00001324903.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119914.1";
mm10-chrY	HAVANA	exon	67367396	67367540	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000189561.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "processed_transcript"; transcript_name "Gm29633-206"; exon_number 2; exon_id "ENSMUSE00001334352.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119914.1";
mm10-chrY	HAVANA	transcript	67368858	67369472	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000186217.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29633-202"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119891.1";
mm10-chrY	HAVANA	exon	67368858	67369472	.	-	.	gene_id "ENSMUSG00000101686.6"; transcript_id "ENSMUST00000186217.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29633"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29633-202"; exon_number 1; exon_id "ENSMUSE00001322791.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045890.2"; havana_transcript "OTTMUST00000119891.1";
mm10-chrY	HAVANA	gene	67405714	67406409	.	-	.	gene_id "ENSMUSG00000099457.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21794"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045891.1";
mm10-chrY	HAVANA	transcript	67405714	67406409	.	-	.	gene_id "ENSMUSG00000099457.1"; transcript_id "ENSMUST00000187056.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21794"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21794-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045891.1"; havana_transcript "OTTMUST00000119892.1";
mm10-chrY	HAVANA	exon	67405714	67406409	.	-	.	gene_id "ENSMUSG00000099457.1"; transcript_id "ENSMUST00000187056.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21794"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21794-201"; exon_number 1; exon_id "ENSMUSE00001332087.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045891.1"; havana_transcript "OTTMUST00000119892.1";
mm10-chrY	HAVANA	gene	67469611	67472849	.	-	.	gene_id "ENSMUSG00000101313.1"; gene_type "lincRNA"; gene_name "Gm29219"; level 2; havana_gene "OTTMUSG00000045902.1";
mm10-chrY	HAVANA	transcript	67469611	67472849	.	-	.	gene_id "ENSMUSG00000101313.1"; transcript_id "ENSMUST00000187224.1"; gene_type "lincRNA"; gene_name "Gm29219"; transcript_type "lincRNA"; transcript_name "Gm29219-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045902.1"; havana_transcript "OTTMUST00000119915.1";
mm10-chrY	HAVANA	exon	67472210	67472849	.	-	.	gene_id "ENSMUSG00000101313.1"; transcript_id "ENSMUST00000187224.1"; gene_type "lincRNA"; gene_name "Gm29219"; transcript_type "lincRNA"; transcript_name "Gm29219-201"; exon_number 1; exon_id "ENSMUSE00001335859.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045902.1"; havana_transcript "OTTMUST00000119915.1";
mm10-chrY	HAVANA	exon	67471539	67471724	.	-	.	gene_id "ENSMUSG00000101313.1"; transcript_id "ENSMUST00000187224.1"; gene_type "lincRNA"; gene_name "Gm29219"; transcript_type "lincRNA"; transcript_name "Gm29219-201"; exon_number 2; exon_id "ENSMUSE00001324327.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045902.1"; havana_transcript "OTTMUST00000119915.1";
mm10-chrY	HAVANA	exon	67470626	67470809	.	-	.	gene_id "ENSMUSG00000101313.1"; transcript_id "ENSMUST00000187224.1"; gene_type "lincRNA"; gene_name "Gm29219"; transcript_type "lincRNA"; transcript_name "Gm29219-201"; exon_number 3; exon_id "ENSMUSE00001333534.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045902.1"; havana_transcript "OTTMUST00000119915.1";
mm10-chrY	HAVANA	exon	67469611	67470099	.	-	.	gene_id "ENSMUSG00000101313.1"; transcript_id "ENSMUST00000187224.1"; gene_type "lincRNA"; gene_name "Gm29219"; transcript_type "lincRNA"; transcript_name "Gm29219-201"; exon_number 4; exon_id "ENSMUSE00001327639.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045902.1"; havana_transcript "OTTMUST00000119915.1";
mm10-chrY	HAVANA	transcript	67470031	67472395	.	-	.	gene_id "ENSMUSG00000101313.1"; transcript_id "ENSMUST00000191144.1"; gene_type "lincRNA"; gene_name "Gm29219"; transcript_type "lincRNA"; transcript_name "Gm29219-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045902.1"; havana_transcript "OTTMUST00000119916.1";
mm10-chrY	HAVANA	exon	67472210	67472395	.	-	.	gene_id "ENSMUSG00000101313.1"; transcript_id "ENSMUST00000191144.1"; gene_type "lincRNA"; gene_name "Gm29219"; transcript_type "lincRNA"; transcript_name "Gm29219-202"; exon_number 1; exon_id "ENSMUSE00001330782.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045902.1"; havana_transcript "OTTMUST00000119916.1";
mm10-chrY	HAVANA	exon	67471539	67471720	.	-	.	gene_id "ENSMUSG00000101313.1"; transcript_id "ENSMUST00000191144.1"; gene_type "lincRNA"; gene_name "Gm29219"; transcript_type "lincRNA"; transcript_name "Gm29219-202"; exon_number 2; exon_id "ENSMUSE00001334962.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045902.1"; havana_transcript "OTTMUST00000119916.1";
mm10-chrY	HAVANA	exon	67470031	67470099	.	-	.	gene_id "ENSMUSG00000101313.1"; transcript_id "ENSMUST00000191144.1"; gene_type "lincRNA"; gene_name "Gm29219"; transcript_type "lincRNA"; transcript_name "Gm29219-202"; exon_number 3; exon_id "ENSMUSE00001318541.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045902.1"; havana_transcript "OTTMUST00000119916.1";
mm10-chrY	HAVANA	gene	67503622	67506965	.	+	.	gene_id "ENSMUSG00000100478.1"; gene_type "lincRNA"; gene_name "Gm29632"; level 2; havana_gene "OTTMUSG00000045892.1";
mm10-chrY	HAVANA	transcript	67503622	67506965	.	+	.	gene_id "ENSMUSG00000100478.1"; transcript_id "ENSMUST00000190335.1"; gene_type "lincRNA"; gene_name "Gm29632"; transcript_type "lincRNA"; transcript_name "Gm29632-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045892.1"; havana_transcript "OTTMUST00000119893.1";
mm10-chrY	HAVANA	exon	67503622	67503844	.	+	.	gene_id "ENSMUSG00000100478.1"; transcript_id "ENSMUST00000190335.1"; gene_type "lincRNA"; gene_name "Gm29632"; transcript_type "lincRNA"; transcript_name "Gm29632-201"; exon_number 1; exon_id "ENSMUSE00001318765.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045892.1"; havana_transcript "OTTMUST00000119893.1";
mm10-chrY	HAVANA	exon	67505023	67506965	.	+	.	gene_id "ENSMUSG00000100478.1"; transcript_id "ENSMUST00000190335.1"; gene_type "lincRNA"; gene_name "Gm29632"; transcript_type "lincRNA"; transcript_name "Gm29632-201"; exon_number 2; exon_id "ENSMUSE00001333280.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045892.1"; havana_transcript "OTTMUST00000119893.1";
mm10-chrY	HAVANA	gene	67508374	67508688	.	+	.	gene_id "ENSMUSG00000101083.1"; gene_type "processed_pseudogene"; gene_name "Gm29631"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045893.1";
mm10-chrY	HAVANA	transcript	67508374	67508688	.	+	.	gene_id "ENSMUSG00000101083.1"; transcript_id "ENSMUST00000191065.1"; gene_type "processed_pseudogene"; gene_name "Gm29631"; transcript_type "processed_pseudogene"; transcript_name "Gm29631-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045893.1"; havana_transcript "OTTMUST00000119894.1";
mm10-chrY	HAVANA	exon	67508374	67508688	.	+	.	gene_id "ENSMUSG00000101083.1"; transcript_id "ENSMUST00000191065.1"; gene_type "processed_pseudogene"; gene_name "Gm29631"; transcript_type "processed_pseudogene"; transcript_name "Gm29631-201"; exon_number 1; exon_id "ENSMUSE00001332742.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045893.1"; havana_transcript "OTTMUST00000119894.1";
mm10-chrY	HAVANA	gene	67544885	67545580	.	+	.	gene_id "ENSMUSG00000102118.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29637"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045894.1";
mm10-chrY	HAVANA	transcript	67544885	67545580	.	+	.	gene_id "ENSMUSG00000102118.1"; transcript_id "ENSMUST00000188877.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29637"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29637-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045894.1"; havana_transcript "OTTMUST00000119895.1";
mm10-chrY	HAVANA	exon	67544885	67545580	.	+	.	gene_id "ENSMUSG00000102118.1"; transcript_id "ENSMUST00000188877.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29637"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29637-201"; exon_number 1; exon_id "ENSMUSE00001319914.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045894.1"; havana_transcript "OTTMUST00000119895.1";
mm10-chrY	HAVANA	gene	67606856	67631468	.	-	.	gene_id "ENSMUSG00000096881.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20874"; level 2; havana_gene "OTTMUSG00000045903.1";
mm10-chrY	HAVANA	transcript	67606856	67631468	.	-	.	gene_id "ENSMUSG00000096881.2"; transcript_id "ENSMUST00000178356.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20874"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20874-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045903.1"; havana_transcript "OTTMUST00000119917.1";
mm10-chrY	HAVANA	exon	67631351	67631468	.	-	.	gene_id "ENSMUSG00000096881.2"; transcript_id "ENSMUST00000178356.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20874"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20874-201"; exon_number 1; exon_id "ENSMUSE00000977652.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045903.1"; havana_transcript "OTTMUST00000119917.1";
mm10-chrY	HAVANA	exon	67625952	67626018	.	-	.	gene_id "ENSMUSG00000096881.2"; transcript_id "ENSMUST00000178356.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20874"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20874-201"; exon_number 2; exon_id "ENSMUSE00001014418.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045903.1"; havana_transcript "OTTMUST00000119917.1";
mm10-chrY	HAVANA	exon	67625251	67625285	.	-	.	gene_id "ENSMUSG00000096881.2"; transcript_id "ENSMUST00000178356.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20874"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20874-201"; exon_number 3; exon_id "ENSMUSE00000963933.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045903.1"; havana_transcript "OTTMUST00000119917.1";
mm10-chrY	HAVANA	exon	67618157	67618223	.	-	.	gene_id "ENSMUSG00000096881.2"; transcript_id "ENSMUST00000178356.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20874"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20874-201"; exon_number 4; exon_id "ENSMUSE00001320638.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045903.1"; havana_transcript "OTTMUST00000119917.1";
mm10-chrY	HAVANA	exon	67617541	67617575	.	-	.	gene_id "ENSMUSG00000096881.2"; transcript_id "ENSMUST00000178356.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20874"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20874-201"; exon_number 5; exon_id "ENSMUSE00001326931.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045903.1"; havana_transcript "OTTMUST00000119917.1";
mm10-chrY	HAVANA	exon	67610229	67610346	.	-	.	gene_id "ENSMUSG00000096881.2"; transcript_id "ENSMUST00000178356.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20874"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20874-201"; exon_number 6; exon_id "ENSMUSE00000985613.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045903.1"; havana_transcript "OTTMUST00000119917.1";
mm10-chrY	HAVANA	exon	67609363	67609462	.	-	.	gene_id "ENSMUSG00000096881.2"; transcript_id "ENSMUST00000178356.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20874"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20874-201"; exon_number 7; exon_id "ENSMUSE00001005588.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045903.1"; havana_transcript "OTTMUST00000119917.1";
mm10-chrY	HAVANA	exon	67607239	67607337	.	-	.	gene_id "ENSMUSG00000096881.2"; transcript_id "ENSMUST00000178356.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20874"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20874-201"; exon_number 8; exon_id "ENSMUSE00001020165.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045903.1"; havana_transcript "OTTMUST00000119917.1";
mm10-chrY	HAVANA	exon	67606856	67606879	.	-	.	gene_id "ENSMUSG00000096881.2"; transcript_id "ENSMUST00000178356.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm20874"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20874-201"; exon_number 9; exon_id "ENSMUSE00001064457.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045903.1"; havana_transcript "OTTMUST00000119917.1";
mm10-chrY	HAVANA	gene	67675333	67685792	.	+	.	gene_id "ENSMUSG00000099716.1"; gene_type "lincRNA"; gene_name "Gm29082"; level 2; havana_gene "OTTMUSG00000045904.1";
mm10-chrY	HAVANA	transcript	67675333	67685792	.	+	.	gene_id "ENSMUSG00000099716.1"; transcript_id "ENSMUST00000185207.1"; gene_type "lincRNA"; gene_name "Gm29082"; transcript_type "lincRNA"; transcript_name "Gm29082-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045904.1"; havana_transcript "OTTMUST00000119918.1";
mm10-chrY	HAVANA	exon	67675333	67675392	.	+	.	gene_id "ENSMUSG00000099716.1"; transcript_id "ENSMUST00000185207.1"; gene_type "lincRNA"; gene_name "Gm29082"; transcript_type "lincRNA"; transcript_name "Gm29082-201"; exon_number 1; exon_id "ENSMUSE00001332551.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045904.1"; havana_transcript "OTTMUST00000119918.1";
mm10-chrY	HAVANA	exon	67679000	67679141	.	+	.	gene_id "ENSMUSG00000099716.1"; transcript_id "ENSMUST00000185207.1"; gene_type "lincRNA"; gene_name "Gm29082"; transcript_type "lincRNA"; transcript_name "Gm29082-201"; exon_number 2; exon_id "ENSMUSE00001329504.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045904.1"; havana_transcript "OTTMUST00000119918.1";
mm10-chrY	HAVANA	exon	67684150	67684241	.	+	.	gene_id "ENSMUSG00000099716.1"; transcript_id "ENSMUST00000185207.1"; gene_type "lincRNA"; gene_name "Gm29082"; transcript_type "lincRNA"; transcript_name "Gm29082-201"; exon_number 3; exon_id "ENSMUSE00001325967.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045904.1"; havana_transcript "OTTMUST00000119918.1";
mm10-chrY	HAVANA	exon	67685639	67685792	.	+	.	gene_id "ENSMUSG00000099716.1"; transcript_id "ENSMUST00000185207.1"; gene_type "lincRNA"; gene_name "Gm29082"; transcript_type "lincRNA"; transcript_name "Gm29082-201"; exon_number 4; exon_id "ENSMUSE00001332425.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045904.1"; havana_transcript "OTTMUST00000119918.1";
mm10-chrY	HAVANA	gene	67678772	67682009	.	-	.	gene_id "ENSMUSG00000101794.1"; gene_type "lincRNA"; gene_name "Gm29217"; level 2; havana_gene "OTTMUSG00000045905.1";
mm10-chrY	HAVANA	transcript	67678772	67682009	.	-	.	gene_id "ENSMUSG00000101794.1"; transcript_id "ENSMUST00000191270.1"; gene_type "lincRNA"; gene_name "Gm29217"; transcript_type "lincRNA"; transcript_name "Gm29217-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045905.1"; havana_transcript "OTTMUST00000119919.1";
mm10-chrY	HAVANA	exon	67681371	67682009	.	-	.	gene_id "ENSMUSG00000101794.1"; transcript_id "ENSMUST00000191270.1"; gene_type "lincRNA"; gene_name "Gm29217"; transcript_type "lincRNA"; transcript_name "Gm29217-202"; exon_number 1; exon_id "ENSMUSE00001335299.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045905.1"; havana_transcript "OTTMUST00000119919.1";
mm10-chrY	HAVANA	exon	67680700	67680885	.	-	.	gene_id "ENSMUSG00000101794.1"; transcript_id "ENSMUST00000191270.1"; gene_type "lincRNA"; gene_name "Gm29217"; transcript_type "lincRNA"; transcript_name "Gm29217-202"; exon_number 2; exon_id "ENSMUSE00001326346.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045905.1"; havana_transcript "OTTMUST00000119919.1";
mm10-chrY	HAVANA	exon	67679787	67679970	.	-	.	gene_id "ENSMUSG00000101794.1"; transcript_id "ENSMUST00000191270.1"; gene_type "lincRNA"; gene_name "Gm29217"; transcript_type "lincRNA"; transcript_name "Gm29217-202"; exon_number 3; exon_id "ENSMUSE00001322693.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045905.1"; havana_transcript "OTTMUST00000119919.1";
mm10-chrY	HAVANA	exon	67678772	67679260	.	-	.	gene_id "ENSMUSG00000101794.1"; transcript_id "ENSMUST00000191270.1"; gene_type "lincRNA"; gene_name "Gm29217"; transcript_type "lincRNA"; transcript_name "Gm29217-202"; exon_number 4; exon_id "ENSMUSE00001329607.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045905.1"; havana_transcript "OTTMUST00000119919.1";
mm10-chrY	HAVANA	transcript	67679192	67681556	.	-	.	gene_id "ENSMUSG00000101794.1"; transcript_id "ENSMUST00000189237.1"; gene_type "lincRNA"; gene_name "Gm29217"; transcript_type "lincRNA"; transcript_name "Gm29217-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045905.1"; havana_transcript "OTTMUST00000119920.1";
mm10-chrY	HAVANA	exon	67681371	67681556	.	-	.	gene_id "ENSMUSG00000101794.1"; transcript_id "ENSMUST00000189237.1"; gene_type "lincRNA"; gene_name "Gm29217"; transcript_type "lincRNA"; transcript_name "Gm29217-201"; exon_number 1; exon_id "ENSMUSE00001332164.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045905.1"; havana_transcript "OTTMUST00000119920.1";
mm10-chrY	HAVANA	exon	67680700	67680881	.	-	.	gene_id "ENSMUSG00000101794.1"; transcript_id "ENSMUST00000189237.1"; gene_type "lincRNA"; gene_name "Gm29217"; transcript_type "lincRNA"; transcript_name "Gm29217-201"; exon_number 2; exon_id "ENSMUSE00001330189.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045905.1"; havana_transcript "OTTMUST00000119920.1";
mm10-chrY	HAVANA	exon	67679192	67679260	.	-	.	gene_id "ENSMUSG00000101794.1"; transcript_id "ENSMUST00000189237.1"; gene_type "lincRNA"; gene_name "Gm29217"; transcript_type "lincRNA"; transcript_name "Gm29217-201"; exon_number 3; exon_id "ENSMUSE00001318544.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045905.1"; havana_transcript "OTTMUST00000119920.1";
mm10-chrY	HAVANA	gene	67716432	67719778	.	+	.	gene_id "ENSMUSG00000101529.1"; gene_type "lincRNA"; gene_name "Gm29636"; level 2; havana_gene "OTTMUSG00000045895.1";
mm10-chrY	HAVANA	transcript	67716432	67719778	.	+	.	gene_id "ENSMUSG00000101529.1"; transcript_id "ENSMUST00000188149.1"; gene_type "lincRNA"; gene_name "Gm29636"; transcript_type "lincRNA"; transcript_name "Gm29636-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045895.1"; havana_transcript "OTTMUST00000119896.1";
mm10-chrY	HAVANA	exon	67716432	67716654	.	+	.	gene_id "ENSMUSG00000101529.1"; transcript_id "ENSMUST00000188149.1"; gene_type "lincRNA"; gene_name "Gm29636"; transcript_type "lincRNA"; transcript_name "Gm29636-201"; exon_number 1; exon_id "ENSMUSE00001330139.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045895.1"; havana_transcript "OTTMUST00000119896.1";
mm10-chrY	HAVANA	exon	67717833	67719778	.	+	.	gene_id "ENSMUSG00000101529.1"; transcript_id "ENSMUST00000188149.1"; gene_type "lincRNA"; gene_name "Gm29636"; transcript_type "lincRNA"; transcript_name "Gm29636-201"; exon_number 2; exon_id "ENSMUSE00001320358.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045895.1"; havana_transcript "OTTMUST00000119896.1";
mm10-chrY	HAVANA	gene	67721188	67721502	.	+	.	gene_id "ENSMUSG00000099335.1"; gene_type "processed_pseudogene"; gene_name "Gm29635"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045896.1";
mm10-chrY	HAVANA	transcript	67721188	67721502	.	+	.	gene_id "ENSMUSG00000099335.1"; transcript_id "ENSMUST00000187221.1"; gene_type "processed_pseudogene"; gene_name "Gm29635"; transcript_type "processed_pseudogene"; transcript_name "Gm29635-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045896.1"; havana_transcript "OTTMUST00000119897.1";
mm10-chrY	HAVANA	exon	67721188	67721502	.	+	.	gene_id "ENSMUSG00000099335.1"; transcript_id "ENSMUST00000187221.1"; gene_type "processed_pseudogene"; gene_name "Gm29635"; transcript_type "processed_pseudogene"; transcript_name "Gm29635-201"; exon_number 1; exon_id "ENSMUSE00001324424.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045896.1"; havana_transcript "OTTMUST00000119897.1";
mm10-chrY	HAVANA	gene	67757697	67758392	.	+	.	gene_id "ENSMUSG00000100897.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29634"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045897.1";
mm10-chrY	HAVANA	transcript	67757697	67758392	.	+	.	gene_id "ENSMUSG00000100897.1"; transcript_id "ENSMUST00000188467.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29634"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29634-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045897.1"; havana_transcript "OTTMUST00000119898.1";
mm10-chrY	HAVANA	exon	67757697	67758392	.	+	.	gene_id "ENSMUSG00000100897.1"; transcript_id "ENSMUST00000188467.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29634"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29634-201"; exon_number 1; exon_id "ENSMUSE00001332268.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045897.1"; havana_transcript "OTTMUST00000119898.1";
mm10-chrY	HAVANA	gene	67818566	67829491	.	-	.	gene_id "ENSMUSG00000101139.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29639"; level 2; havana_gene "OTTMUSG00000045898.1";
mm10-chrY	HAVANA	transcript	67818566	67829491	.	-	.	gene_id "ENSMUSG00000101139.1"; transcript_id "ENSMUST00000188375.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29639"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29639-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045898.1"; havana_transcript "OTTMUST00000119899.1";
mm10-chrY	HAVANA	exon	67829456	67829491	.	-	.	gene_id "ENSMUSG00000101139.1"; transcript_id "ENSMUST00000188375.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29639"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29639-201"; exon_number 1; exon_id "ENSMUSE00001319510.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045898.1"; havana_transcript "OTTMUST00000119899.1";
mm10-chrY	HAVANA	exon	67822171	67822288	.	-	.	gene_id "ENSMUSG00000101139.1"; transcript_id "ENSMUST00000188375.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29639"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29639-201"; exon_number 2; exon_id "ENSMUSE00001333388.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045898.1"; havana_transcript "OTTMUST00000119899.1";
mm10-chrY	HAVANA	exon	67821294	67821393	.	-	.	gene_id "ENSMUSG00000101139.1"; transcript_id "ENSMUST00000188375.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29639"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29639-201"; exon_number 3; exon_id "ENSMUSE00001322616.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045898.1"; havana_transcript "OTTMUST00000119899.1";
mm10-chrY	HAVANA	exon	67819152	67819250	.	-	.	gene_id "ENSMUSG00000101139.1"; transcript_id "ENSMUST00000188375.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29639"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29639-201"; exon_number 4; exon_id "ENSMUSE00001322395.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045898.1"; havana_transcript "OTTMUST00000119899.1";
mm10-chrY	HAVANA	exon	67818566	67818792	.	-	.	gene_id "ENSMUSG00000101139.1"; transcript_id "ENSMUST00000188375.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29639"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29639-201"; exon_number 5; exon_id "ENSMUSE00001319569.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045898.1"; havana_transcript "OTTMUST00000119899.1";
mm10-chrY	HAVANA	gene	67917874	67928301	.	+	.	gene_id "ENSMUSG00000101164.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045906.1";
mm10-chrY	HAVANA	transcript	67917874	67928301	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191419.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-208"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119924.1";
mm10-chrY	HAVANA	exon	67917874	67918010	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191419.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-208"; exon_number 1; exon_id "ENSMUSE00001328808.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119924.1";
mm10-chrY	HAVANA	exon	67927009	67927142	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191419.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-208"; exon_number 2; exon_id "ENSMUSE00001326278.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119924.1";
mm10-chrY	HAVANA	exon	67927437	67928301	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191419.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-208"; exon_number 3; exon_id "ENSMUSE00001331593.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119924.1";
mm10-chrY	HAVANA	transcript	67917931	67922134	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191168.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-206"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119925.1";
mm10-chrY	HAVANA	exon	67917931	67918010	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191168.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-206"; exon_number 1; exon_id "ENSMUSE00001325729.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119925.1";
mm10-chrY	HAVANA	exon	67919319	67919555	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191168.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-206"; exon_number 2; exon_id "ENSMUSE00001335784.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119925.1";
mm10-chrY	HAVANA	exon	67921394	67921577	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191168.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-206"; exon_number 3; exon_id "ENSMUSE00001321888.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119925.1";
mm10-chrY	HAVANA	exon	67922093	67922134	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191168.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-206"; exon_number 4; exon_id "ENSMUSE00001331882.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119925.1";
mm10-chrY	HAVANA	transcript	67917954	67921538	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000186953.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-202"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119926.1";
mm10-chrY	HAVANA	exon	67917954	67918010	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000186953.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-202"; exon_number 1; exon_id "ENSMUSE00001329120.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119926.1";
mm10-chrY	HAVANA	exon	67921394	67921538	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000186953.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-202"; exon_number 2; exon_id "ENSMUSE00001331654.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119926.1";
mm10-chrY	HAVANA	transcript	67919462	67920076	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000190846.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29218-205"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119927.1";
mm10-chrY	HAVANA	exon	67919462	67920076	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000190846.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29218-205"; exon_number 1; exon_id "ENSMUSE00001322019.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119927.1";
mm10-chrY	HAVANA	transcript	67919899	67921481	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000190454.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-204"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119928.1";
mm10-chrY	HAVANA	exon	67919899	67919996	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000190454.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-204"; exon_number 1; exon_id "ENSMUSE00001325402.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119928.1";
mm10-chrY	HAVANA	exon	67920656	67920698	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000190454.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-204"; exon_number 2; exon_id "ENSMUSE00001333188.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119928.1";
mm10-chrY	HAVANA	exon	67921394	67921481	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000190454.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-204"; exon_number 3; exon_id "ENSMUSE00001323581.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119928.1";
mm10-chrY	HAVANA	transcript	67919899	67922134	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000185344.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119929.1";
mm10-chrY	HAVANA	exon	67919899	67919996	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000185344.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-201"; exon_number 1; exon_id "ENSMUSE00001325402.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119929.1";
mm10-chrY	HAVANA	exon	67920481	67920698	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000185344.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-201"; exon_number 2; exon_id "ENSMUSE00001331887.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119929.1";
mm10-chrY	HAVANA	exon	67921394	67921577	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000185344.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-201"; exon_number 3; exon_id "ENSMUSE00001321888.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119929.1";
mm10-chrY	HAVANA	exon	67922093	67922134	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000185344.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-201"; exon_number 4; exon_id "ENSMUSE00001331882.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119929.1";
mm10-chrY	HAVANA	transcript	67919899	67922134	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000189610.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-203"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119930.1";
mm10-chrY	HAVANA	exon	67919899	67919996	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000189610.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-203"; exon_number 1; exon_id "ENSMUSE00001325402.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119930.1";
mm10-chrY	HAVANA	exon	67921394	67921577	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000189610.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-203"; exon_number 2; exon_id "ENSMUSE00001321888.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119930.1";
mm10-chrY	HAVANA	exon	67922093	67922134	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000189610.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-203"; exon_number 3; exon_id "ENSMUSE00001331882.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119930.1";
mm10-chrY	HAVANA	transcript	67919901	67922134	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191342.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-207"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119931.1";
mm10-chrY	HAVANA	exon	67919901	67919996	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191342.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-207"; exon_number 1; exon_id "ENSMUSE00001328847.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119931.1";
mm10-chrY	HAVANA	exon	67922093	67922134	.	+	.	gene_id "ENSMUSG00000101164.6"; transcript_id "ENSMUST00000191342.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29218"; transcript_type "processed_transcript"; transcript_name "Gm29218-207"; exon_number 2; exon_id "ENSMUSE00001331882.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045906.1"; havana_transcript "OTTMUST00000119931.1";
mm10-chrY	HAVANA	gene	67948842	67949537	.	+	.	gene_id "ENSMUSG00000101825.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21806"; level 2; havana_gene "OTTMUSG00000045913.1";
mm10-chrY	HAVANA	transcript	67948842	67949537	.	+	.	gene_id "ENSMUSG00000101825.1"; transcript_id "ENSMUST00000188405.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21806"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21806-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045913.1"; havana_transcript "OTTMUST00000119947.1";
mm10-chrY	HAVANA	exon	67948842	67949537	.	+	.	gene_id "ENSMUSG00000101825.1"; transcript_id "ENSMUST00000188405.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21806"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21806-201"; exon_number 1; exon_id "ENSMUSE00001333604.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045913.1"; havana_transcript "OTTMUST00000119947.1";
mm10-chrY	HAVANA	gene	68023542	68024234	.	+	.	gene_id "ENSMUSG00000099976.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20935"; level 2; havana_gene "OTTMUSG00000045914.1";
mm10-chrY	HAVANA	transcript	68023542	68024234	.	+	.	gene_id "ENSMUSG00000099976.1"; transcript_id "ENSMUST00000187518.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20935"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20935-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045914.1"; havana_transcript "OTTMUST00000119948.1";
mm10-chrY	HAVANA	exon	68023542	68024234	.	+	.	gene_id "ENSMUSG00000099976.1"; transcript_id "ENSMUST00000187518.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20935"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20935-201"; exon_number 1; exon_id "ENSMUSE00001325974.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045914.1"; havana_transcript "OTTMUST00000119948.1";
mm10-chrY	HAVANA	gene	68131623	68134861	.	-	.	gene_id "ENSMUSG00000099501.1"; gene_type "lincRNA"; gene_name "Gm29662"; level 2; havana_gene "OTTMUSG00000045915.1";
mm10-chrY	HAVANA	transcript	68131623	68134861	.	-	.	gene_id "ENSMUSG00000099501.1"; transcript_id "ENSMUST00000185620.1"; gene_type "lincRNA"; gene_name "Gm29662"; transcript_type "lincRNA"; transcript_name "Gm29662-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045915.1"; havana_transcript "OTTMUST00000119949.1";
mm10-chrY	HAVANA	exon	68134222	68134861	.	-	.	gene_id "ENSMUSG00000099501.1"; transcript_id "ENSMUST00000185620.1"; gene_type "lincRNA"; gene_name "Gm29662"; transcript_type "lincRNA"; transcript_name "Gm29662-201"; exon_number 1; exon_id "ENSMUSE00001329105.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045915.1"; havana_transcript "OTTMUST00000119949.1";
mm10-chrY	HAVANA	exon	68133551	68133736	.	-	.	gene_id "ENSMUSG00000099501.1"; transcript_id "ENSMUST00000185620.1"; gene_type "lincRNA"; gene_name "Gm29662"; transcript_type "lincRNA"; transcript_name "Gm29662-201"; exon_number 2; exon_id "ENSMUSE00001335009.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045915.1"; havana_transcript "OTTMUST00000119949.1";
mm10-chrY	HAVANA	exon	68132638	68132821	.	-	.	gene_id "ENSMUSG00000099501.1"; transcript_id "ENSMUST00000185620.1"; gene_type "lincRNA"; gene_name "Gm29662"; transcript_type "lincRNA"; transcript_name "Gm29662-201"; exon_number 3; exon_id "ENSMUSE00001322547.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045915.1"; havana_transcript "OTTMUST00000119949.1";
mm10-chrY	HAVANA	exon	68131623	68132111	.	-	.	gene_id "ENSMUSG00000099501.1"; transcript_id "ENSMUST00000185620.1"; gene_type "lincRNA"; gene_name "Gm29662"; transcript_type "lincRNA"; transcript_name "Gm29662-201"; exon_number 4; exon_id "ENSMUSE00001323319.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045915.1"; havana_transcript "OTTMUST00000119949.1";
mm10-chrY	HAVANA	transcript	68132043	68134408	.	-	.	gene_id "ENSMUSG00000099501.1"; transcript_id "ENSMUST00000190065.1"; gene_type "lincRNA"; gene_name "Gm29662"; transcript_type "lincRNA"; transcript_name "Gm29662-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045915.1"; havana_transcript "OTTMUST00000119950.1";
mm10-chrY	HAVANA	exon	68134222	68134408	.	-	.	gene_id "ENSMUSG00000099501.1"; transcript_id "ENSMUST00000190065.1"; gene_type "lincRNA"; gene_name "Gm29662"; transcript_type "lincRNA"; transcript_name "Gm29662-202"; exon_number 1; exon_id "ENSMUSE00001327482.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045915.1"; havana_transcript "OTTMUST00000119950.1";
mm10-chrY	HAVANA	exon	68133551	68133732	.	-	.	gene_id "ENSMUSG00000099501.1"; transcript_id "ENSMUST00000190065.1"; gene_type "lincRNA"; gene_name "Gm29662"; transcript_type "lincRNA"; transcript_name "Gm29662-202"; exon_number 2; exon_id "ENSMUSE00001323843.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045915.1"; havana_transcript "OTTMUST00000119950.1";
mm10-chrY	HAVANA	exon	68132043	68132111	.	-	.	gene_id "ENSMUSG00000099501.1"; transcript_id "ENSMUST00000190065.1"; gene_type "lincRNA"; gene_name "Gm29662"; transcript_type "lincRNA"; transcript_name "Gm29662-202"; exon_number 3; exon_id "ENSMUSE00001319764.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045915.1"; havana_transcript "OTTMUST00000119950.1";
mm10-chrY	HAVANA	gene	68165621	68168964	.	+	.	gene_id "ENSMUSG00000099991.1"; gene_type "lincRNA"; gene_name "Gm29660"; level 2; havana_gene "OTTMUSG00000045916.1";
mm10-chrY	HAVANA	transcript	68165621	68168964	.	+	.	gene_id "ENSMUSG00000099991.1"; transcript_id "ENSMUST00000185631.1"; gene_type "lincRNA"; gene_name "Gm29660"; transcript_type "lincRNA"; transcript_name "Gm29660-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045916.1"; havana_transcript "OTTMUST00000119951.1";
mm10-chrY	HAVANA	exon	68165621	68165843	.	+	.	gene_id "ENSMUSG00000099991.1"; transcript_id "ENSMUST00000185631.1"; gene_type "lincRNA"; gene_name "Gm29660"; transcript_type "lincRNA"; transcript_name "Gm29660-201"; exon_number 1; exon_id "ENSMUSE00001332328.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045916.1"; havana_transcript "OTTMUST00000119951.1";
mm10-chrY	HAVANA	exon	68167022	68168964	.	+	.	gene_id "ENSMUSG00000099991.1"; transcript_id "ENSMUST00000185631.1"; gene_type "lincRNA"; gene_name "Gm29660"; transcript_type "lincRNA"; transcript_name "Gm29660-201"; exon_number 2; exon_id "ENSMUSE00001318379.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045916.1"; havana_transcript "OTTMUST00000119951.1";
mm10-chrY	HAVANA	gene	68170371	68170685	.	+	.	gene_id "ENSMUSG00000101358.1"; gene_type "processed_pseudogene"; gene_name "Gm29661"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045917.1";
mm10-chrY	HAVANA	transcript	68170371	68170685	.	+	.	gene_id "ENSMUSG00000101358.1"; transcript_id "ENSMUST00000186781.1"; gene_type "processed_pseudogene"; gene_name "Gm29661"; transcript_type "processed_pseudogene"; transcript_name "Gm29661-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045917.1"; havana_transcript "OTTMUST00000119952.1";
mm10-chrY	HAVANA	exon	68170371	68170685	.	+	.	gene_id "ENSMUSG00000101358.1"; transcript_id "ENSMUST00000186781.1"; gene_type "processed_pseudogene"; gene_name "Gm29661"; transcript_type "processed_pseudogene"; transcript_name "Gm29661-201"; exon_number 1; exon_id "ENSMUSE00001335310.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045917.1"; havana_transcript "OTTMUST00000119952.1";
mm10-chrY	HAVANA	gene	68206802	68207497	.	+	.	gene_id "ENSMUSG00000101816.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29659"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045918.1";
mm10-chrY	HAVANA	transcript	68206802	68207497	.	+	.	gene_id "ENSMUSG00000101816.1"; transcript_id "ENSMUST00000187063.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29659"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29659-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045918.1"; havana_transcript "OTTMUST00000119953.1";
mm10-chrY	HAVANA	exon	68206802	68207497	.	+	.	gene_id "ENSMUSG00000101816.1"; transcript_id "ENSMUST00000187063.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29659"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29659-201"; exon_number 1; exon_id "ENSMUSE00001318195.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045918.1"; havana_transcript "OTTMUST00000119953.1";
mm10-chrY	HAVANA	gene	68268651	68294898	.	-	.	gene_id "ENSMUSG00000096016.7"; gene_type "protein_coding"; gene_name "Gm20937"; level 2; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	HAVANA	transcript	68268651	68294888	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	exon	68294855	68294888	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 1; exon_id "ENSMUSE00001324665.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	exon	68293362	68293493	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 2; exon_id "ENSMUSE00001334353.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	CDS	68293362	68293479	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 2; exon_id "ENSMUSE00001334353.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	start_codon	68293477	68293479	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 2; exon_id "ENSMUSE00001334353.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	exon	68287960	68288026	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 3; exon_id "ENSMUSE00001074764.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	CDS	68287960	68288026	.	-	2	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 3; exon_id "ENSMUSE00001074764.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	exon	68287259	68287293	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 4; exon_id "ENSMUSE00001066392.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	CDS	68287259	68287293	.	-	1	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 4; exon_id "ENSMUSE00001066392.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	exon	68272232	68272349	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 5; exon_id "ENSMUSE00000989364.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	CDS	68272232	68272349	.	-	2	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 5; exon_id "ENSMUSE00000989364.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	exon	68271382	68271481	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 6; exon_id "ENSMUSE00000983747.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	CDS	68271382	68271481	.	-	1	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 6; exon_id "ENSMUSE00000983747.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	exon	68269236	68269334	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 7; exon_id "ENSMUSE00001010085.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	CDS	68269236	68269334	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 7; exon_id "ENSMUSE00001010085.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	exon	68268651	68268876	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 8; exon_id "ENSMUSE00001318125.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	CDS	68268850	68268876	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 8; exon_id "ENSMUSE00001318125.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	stop_codon	68268847	68268849	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 8; exon_id "ENSMUSE00001318125.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	UTR	68294855	68294888	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 1; exon_id "ENSMUSE00001324665.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	UTR	68293480	68293493	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 2; exon_id "ENSMUSE00001334353.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	UTR	68268651	68268849	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189084.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-202"; exon_number 8; exon_id "ENSMUSE00001318125.1"; level 2; protein_id "ENSMUSP00000139975.1"; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000120235.1";
mm10-chrY	HAVANA	transcript	68268651	68294898	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	exon	68294855	68294898	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 1; exon_id "ENSMUSE00001325533.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	exon	68293362	68293493	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 2; exon_id "ENSMUSE00001334353.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	CDS	68293362	68293479	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 2; exon_id "ENSMUSE00001334353.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	start_codon	68293477	68293479	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 2; exon_id "ENSMUSE00001334353.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	exon	68287960	68288026	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 3; exon_id "ENSMUSE00001074764.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	CDS	68287960	68288026	.	-	2	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 3; exon_id "ENSMUSE00001074764.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	exon	68287259	68287293	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 4; exon_id "ENSMUSE00001066392.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	CDS	68287259	68287293	.	-	1	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 4; exon_id "ENSMUSE00001066392.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	exon	68280155	68280221	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 5; exon_id "ENSMUSE00001320143.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	CDS	68280155	68280221	.	-	2	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 5; exon_id "ENSMUSE00001320143.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	exon	68279543	68279577	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 6; exon_id "ENSMUSE00001319390.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	CDS	68279543	68279577	.	-	1	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 6; exon_id "ENSMUSE00001319390.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	exon	68272232	68272349	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 7; exon_id "ENSMUSE00000989364.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	CDS	68272232	68272349	.	-	2	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 7; exon_id "ENSMUSE00000989364.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	exon	68271382	68271481	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 8; exon_id "ENSMUSE00000983747.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	CDS	68271382	68271481	.	-	1	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 8; exon_id "ENSMUSE00000983747.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	exon	68269236	68269334	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 9; exon_id "ENSMUSE00001010085.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	CDS	68269236	68269334	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 9; exon_id "ENSMUSE00001010085.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	exon	68268651	68268876	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 10; exon_id "ENSMUSE00001318125.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	CDS	68268850	68268876	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 10; exon_id "ENSMUSE00001318125.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	stop_codon	68268847	68268849	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 10; exon_id "ENSMUSE00001318125.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	UTR	68294855	68294898	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 1; exon_id "ENSMUSE00001325533.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	UTR	68293480	68293493	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 2; exon_id "ENSMUSE00001334353.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	HAVANA	UTR	68268651	68268849	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000189422.6"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-203"; exon_number 10; exon_id "ENSMUSE00001318125.1"; level 2; protein_id "ENSMUSP00000140064.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045919.2"; havana_transcript "OTTMUST00000119954.1";
mm10-chrY	ENSEMBL	transcript	68268847	68293479	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	exon	68293362	68293479	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 1; exon_id "ENSMUSE00001075219.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	CDS	68293362	68293479	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 1; exon_id "ENSMUSE00001075219.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	start_codon	68293477	68293479	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 1; exon_id "ENSMUSE00001075219.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	exon	68287960	68288026	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 2; exon_id "ENSMUSE00001074764.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	CDS	68287960	68288026	.	-	2	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 2; exon_id "ENSMUSE00001074764.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	exon	68287259	68287293	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 3; exon_id "ENSMUSE00001066392.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	CDS	68287259	68287293	.	-	1	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 3; exon_id "ENSMUSE00001066392.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	exon	68272232	68272349	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 4; exon_id "ENSMUSE00000989364.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	CDS	68272232	68272349	.	-	2	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 4; exon_id "ENSMUSE00000989364.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	exon	68271382	68271481	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 5; exon_id "ENSMUSE00000983747.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	CDS	68271382	68271481	.	-	1	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 5; exon_id "ENSMUSE00000983747.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	exon	68269236	68269334	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 6; exon_id "ENSMUSE00001010085.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	CDS	68269236	68269334	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 6; exon_id "ENSMUSE00001010085.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	exon	68268847	68268876	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 7; exon_id "ENSMUSE00001046255.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	CDS	68268850	68268876	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 7; exon_id "ENSMUSE00001046255.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	stop_codon	68268847	68268849	.	-	0	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 7; exon_id "ENSMUSE00001046255.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	ENSEMBL	UTR	68268847	68268849	.	-	.	gene_id "ENSMUSG00000096016.7"; transcript_id "ENSMUST00000180329.1"; gene_type "protein_coding"; gene_name "Gm20937"; transcript_type "protein_coding"; transcript_name "Gm20937-201"; exon_number 7; exon_id "ENSMUSE00001046255.1"; level 3; protein_id "ENSMUSP00000136591.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045919.2";
mm10-chrY	HAVANA	gene	68353849	68357085	.	-	.	gene_id "ENSMUSG00000101861.1"; gene_type "lincRNA"; gene_name "Gm29450"; level 2; havana_gene "OTTMUSG00000045920.1";
mm10-chrY	HAVANA	transcript	68353849	68357085	.	-	.	gene_id "ENSMUSG00000101861.1"; transcript_id "ENSMUST00000189657.1"; gene_type "lincRNA"; gene_name "Gm29450"; transcript_type "lincRNA"; transcript_name "Gm29450-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045920.1"; havana_transcript "OTTMUST00000119955.1";
mm10-chrY	HAVANA	exon	68356448	68357085	.	-	.	gene_id "ENSMUSG00000101861.1"; transcript_id "ENSMUST00000189657.1"; gene_type "lincRNA"; gene_name "Gm29450"; transcript_type "lincRNA"; transcript_name "Gm29450-201"; exon_number 1; exon_id "ENSMUSE00001328486.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045920.1"; havana_transcript "OTTMUST00000119955.1";
mm10-chrY	HAVANA	exon	68355777	68355962	.	-	.	gene_id "ENSMUSG00000101861.1"; transcript_id "ENSMUST00000189657.1"; gene_type "lincRNA"; gene_name "Gm29450"; transcript_type "lincRNA"; transcript_name "Gm29450-201"; exon_number 2; exon_id "ENSMUSE00001323629.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045920.1"; havana_transcript "OTTMUST00000119955.1";
mm10-chrY	HAVANA	exon	68354864	68355047	.	-	.	gene_id "ENSMUSG00000101861.1"; transcript_id "ENSMUST00000189657.1"; gene_type "lincRNA"; gene_name "Gm29450"; transcript_type "lincRNA"; transcript_name "Gm29450-201"; exon_number 3; exon_id "ENSMUSE00001326859.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045920.1"; havana_transcript "OTTMUST00000119955.1";
mm10-chrY	HAVANA	exon	68353849	68354337	.	-	.	gene_id "ENSMUSG00000101861.1"; transcript_id "ENSMUST00000189657.1"; gene_type "lincRNA"; gene_name "Gm29450"; transcript_type "lincRNA"; transcript_name "Gm29450-201"; exon_number 4; exon_id "ENSMUSE00001332988.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045920.1"; havana_transcript "OTTMUST00000119955.1";
mm10-chrY	HAVANA	transcript	68354269	68356633	.	-	.	gene_id "ENSMUSG00000101861.1"; transcript_id "ENSMUST00000191152.1"; gene_type "lincRNA"; gene_name "Gm29450"; transcript_type "lincRNA"; transcript_name "Gm29450-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045920.1"; havana_transcript "OTTMUST00000119956.1";
mm10-chrY	HAVANA	exon	68356448	68356633	.	-	.	gene_id "ENSMUSG00000101861.1"; transcript_id "ENSMUST00000191152.1"; gene_type "lincRNA"; gene_name "Gm29450"; transcript_type "lincRNA"; transcript_name "Gm29450-202"; exon_number 1; exon_id "ENSMUSE00001326524.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045920.1"; havana_transcript "OTTMUST00000119956.1";
mm10-chrY	HAVANA	exon	68355777	68355958	.	-	.	gene_id "ENSMUSG00000101861.1"; transcript_id "ENSMUST00000191152.1"; gene_type "lincRNA"; gene_name "Gm29450"; transcript_type "lincRNA"; transcript_name "Gm29450-202"; exon_number 2; exon_id "ENSMUSE00001333821.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045920.1"; havana_transcript "OTTMUST00000119956.1";
mm10-chrY	HAVANA	exon	68354269	68354337	.	-	.	gene_id "ENSMUSG00000101861.1"; transcript_id "ENSMUST00000191152.1"; gene_type "lincRNA"; gene_name "Gm29450"; transcript_type "lincRNA"; transcript_name "Gm29450-202"; exon_number 3; exon_id "ENSMUSE00001318151.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045920.1"; havana_transcript "OTTMUST00000119956.1";
mm10-chrY	HAVANA	gene	68388969	68392312	.	+	.	gene_id "ENSMUSG00000101598.1"; gene_type "lincRNA"; gene_name "Gm29449"; level 2; havana_gene "OTTMUSG00000045921.1";
mm10-chrY	HAVANA	transcript	68388969	68392312	.	+	.	gene_id "ENSMUSG00000101598.1"; transcript_id "ENSMUST00000187820.1"; gene_type "lincRNA"; gene_name "Gm29449"; transcript_type "lincRNA"; transcript_name "Gm29449-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045921.1"; havana_transcript "OTTMUST00000119957.1";
mm10-chrY	HAVANA	exon	68388969	68389191	.	+	.	gene_id "ENSMUSG00000101598.1"; transcript_id "ENSMUST00000187820.1"; gene_type "lincRNA"; gene_name "Gm29449"; transcript_type "lincRNA"; transcript_name "Gm29449-201"; exon_number 1; exon_id "ENSMUSE00001331320.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045921.1"; havana_transcript "OTTMUST00000119957.1";
mm10-chrY	HAVANA	exon	68390368	68392312	.	+	.	gene_id "ENSMUSG00000101598.1"; transcript_id "ENSMUST00000187820.1"; gene_type "lincRNA"; gene_name "Gm29449"; transcript_type "lincRNA"; transcript_name "Gm29449-201"; exon_number 2; exon_id "ENSMUSE00001329866.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045921.1"; havana_transcript "OTTMUST00000119957.1";
mm10-chrY	HAVANA	gene	68398364	68399059	.	+	.	gene_id "ENSMUSG00000100216.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21867"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045922.1";
mm10-chrY	HAVANA	transcript	68398364	68399059	.	+	.	gene_id "ENSMUSG00000100216.1"; transcript_id "ENSMUST00000189917.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21867"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21867-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045922.1"; havana_transcript "OTTMUST00000119958.1";
mm10-chrY	HAVANA	exon	68398364	68399059	.	+	.	gene_id "ENSMUSG00000100216.1"; transcript_id "ENSMUST00000189917.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21867"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21867-201"; exon_number 1; exon_id "ENSMUSE00001321354.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045922.1"; havana_transcript "OTTMUST00000119958.1";
mm10-chrY	HAVANA	gene	68435293	68435907	.	+	.	gene_id "ENSMUSG00000099641.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29448"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045923.1";
mm10-chrY	HAVANA	transcript	68435293	68435907	.	+	.	gene_id "ENSMUSG00000099641.1"; transcript_id "ENSMUST00000186675.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29448"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29448-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045923.1"; havana_transcript "OTTMUST00000119959.1";
mm10-chrY	HAVANA	exon	68435293	68435907	.	+	.	gene_id "ENSMUSG00000099641.1"; transcript_id "ENSMUST00000186675.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29448"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29448-201"; exon_number 1; exon_id "ENSMUSE00001330786.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045923.1"; havana_transcript "OTTMUST00000119959.1";
mm10-chrY	HAVANA	gene	68464868	68465560	.	+	.	gene_id "ENSMUSG00000100271.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21127"; level 2; havana_gene "OTTMUSG00000045924.1";
mm10-chrY	HAVANA	transcript	68464868	68465560	.	+	.	gene_id "ENSMUSG00000100271.1"; transcript_id "ENSMUST00000186909.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21127"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21127-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045924.1"; havana_transcript "OTTMUST00000119960.1";
mm10-chrY	HAVANA	exon	68464868	68465560	.	+	.	gene_id "ENSMUSG00000100271.1"; transcript_id "ENSMUST00000186909.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21127"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21127-201"; exon_number 1; exon_id "ENSMUSE00001330227.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045924.1"; havana_transcript "OTTMUST00000119960.1";
mm10-chrY	HAVANA	gene	68537955	68540290	.	+	.	gene_id "ENSMUSG00000095634.2"; gene_type "protein_coding"; gene_name "Gm20816"; level 2; havana_gene "OTTMUSG00000045925.2";
mm10-chrY	HAVANA	transcript	68537955	68540290	.	+	.	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000187846.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-202"; level 2; protein_id "ENSMUSP00000140326.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2"; havana_transcript "OTTMUST00000119961.2";
mm10-chrY	HAVANA	exon	68537955	68538078	.	+	.	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000187846.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-202"; exon_number 1; exon_id "ENSMUSE00001326014.1"; level 2; protein_id "ENSMUSP00000140326.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2"; havana_transcript "OTTMUST00000119961.2";
mm10-chrY	HAVANA	exon	68539190	68540290	.	+	.	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000187846.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-202"; exon_number 2; exon_id "ENSMUSE00001330616.1"; level 2; protein_id "ENSMUSP00000140326.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2"; havana_transcript "OTTMUST00000119961.2";
mm10-chrY	HAVANA	CDS	68539472	68540152	.	+	0	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000187846.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-202"; exon_number 2; exon_id "ENSMUSE00001330616.1"; level 2; protein_id "ENSMUSP00000140326.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2"; havana_transcript "OTTMUST00000119961.2";
mm10-chrY	HAVANA	start_codon	68539472	68539474	.	+	0	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000187846.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-202"; exon_number 2; exon_id "ENSMUSE00001330616.1"; level 2; protein_id "ENSMUSP00000140326.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2"; havana_transcript "OTTMUST00000119961.2";
mm10-chrY	HAVANA	stop_codon	68540153	68540155	.	+	0	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000187846.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-202"; exon_number 2; exon_id "ENSMUSE00001330616.1"; level 2; protein_id "ENSMUSP00000140326.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2"; havana_transcript "OTTMUST00000119961.2";
mm10-chrY	HAVANA	UTR	68537955	68538078	.	+	.	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000187846.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-202"; exon_number 1; exon_id "ENSMUSE00001326014.1"; level 2; protein_id "ENSMUSP00000140326.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2"; havana_transcript "OTTMUST00000119961.2";
mm10-chrY	HAVANA	UTR	68539190	68539471	.	+	.	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000187846.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-202"; exon_number 2; exon_id "ENSMUSE00001330616.1"; level 2; protein_id "ENSMUSP00000140326.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2"; havana_transcript "OTTMUST00000119961.2";
mm10-chrY	HAVANA	UTR	68540153	68540290	.	+	.	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000187846.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-202"; exon_number 2; exon_id "ENSMUSE00001330616.1"; level 2; protein_id "ENSMUSP00000140326.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2"; havana_transcript "OTTMUST00000119961.2";
mm10-chrY	ENSEMBL	transcript	68539472	68540155	.	+	.	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000177765.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-201"; level 3; protein_id "ENSMUSP00000137306.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2";
mm10-chrY	ENSEMBL	exon	68539472	68540155	.	+	.	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000177765.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-201"; exon_number 1; exon_id "ENSMUSE00000977305.1"; level 3; protein_id "ENSMUSP00000137306.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2";
mm10-chrY	ENSEMBL	CDS	68539472	68540152	.	+	0	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000177765.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-201"; exon_number 1; exon_id "ENSMUSE00000977305.1"; level 3; protein_id "ENSMUSP00000137306.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2";
mm10-chrY	ENSEMBL	start_codon	68539472	68539474	.	+	0	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000177765.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-201"; exon_number 1; exon_id "ENSMUSE00000977305.1"; level 3; protein_id "ENSMUSP00000137306.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2";
mm10-chrY	ENSEMBL	stop_codon	68540153	68540155	.	+	0	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000177765.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-201"; exon_number 1; exon_id "ENSMUSE00000977305.1"; level 3; protein_id "ENSMUSP00000137306.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2";
mm10-chrY	ENSEMBL	UTR	68540153	68540155	.	+	.	gene_id "ENSMUSG00000095634.2"; transcript_id "ENSMUST00000177765.1"; gene_type "protein_coding"; gene_name "Gm20816"; transcript_type "protein_coding"; transcript_name "Gm20816-201"; exon_number 1; exon_id "ENSMUSE00000977305.1"; level 3; protein_id "ENSMUSP00000137306.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85895.1"; havana_gene "OTTMUSG00000045925.2";
mm10-chrY	HAVANA	gene	68667605	68670844	.	-	.	gene_id "ENSMUSG00000101393.1"; gene_type "processed_transcript"; gene_name "Gm29447"; level 2; havana_gene "OTTMUSG00000045926.1";
mm10-chrY	HAVANA	transcript	68667605	68670844	.	-	.	gene_id "ENSMUSG00000101393.1"; transcript_id "ENSMUST00000186407.1"; gene_type "processed_transcript"; gene_name "Gm29447"; transcript_type "processed_transcript"; transcript_name "Gm29447-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045926.1"; havana_transcript "OTTMUST00000119962.1";
mm10-chrY	HAVANA	exon	68670205	68670844	.	-	.	gene_id "ENSMUSG00000101393.1"; transcript_id "ENSMUST00000186407.1"; gene_type "processed_transcript"; gene_name "Gm29447"; transcript_type "processed_transcript"; transcript_name "Gm29447-201"; exon_number 1; exon_id "ENSMUSE00001334992.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045926.1"; havana_transcript "OTTMUST00000119962.1";
mm10-chrY	HAVANA	exon	68669534	68669719	.	-	.	gene_id "ENSMUSG00000101393.1"; transcript_id "ENSMUST00000186407.1"; gene_type "processed_transcript"; gene_name "Gm29447"; transcript_type "processed_transcript"; transcript_name "Gm29447-201"; exon_number 2; exon_id "ENSMUSE00001325732.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045926.1"; havana_transcript "OTTMUST00000119962.1";
mm10-chrY	HAVANA	exon	68668621	68668804	.	-	.	gene_id "ENSMUSG00000101393.1"; transcript_id "ENSMUST00000186407.1"; gene_type "processed_transcript"; gene_name "Gm29447"; transcript_type "processed_transcript"; transcript_name "Gm29447-201"; exon_number 3; exon_id "ENSMUSE00001320869.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045926.1"; havana_transcript "OTTMUST00000119962.1";
mm10-chrY	HAVANA	exon	68667605	68668094	.	-	.	gene_id "ENSMUSG00000101393.1"; transcript_id "ENSMUST00000186407.1"; gene_type "processed_transcript"; gene_name "Gm29447"; transcript_type "processed_transcript"; transcript_name "Gm29447-201"; exon_number 4; exon_id "ENSMUSE00001329165.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045926.1"; havana_transcript "OTTMUST00000119962.1";
mm10-chrY	HAVANA	transcript	68668026	68670391	.	-	.	gene_id "ENSMUSG00000101393.1"; transcript_id "ENSMUST00000186590.1"; gene_type "processed_transcript"; gene_name "Gm29447"; transcript_type "processed_transcript"; transcript_name "Gm29447-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045926.1"; havana_transcript "OTTMUST00000119963.1";
mm10-chrY	HAVANA	exon	68670205	68670391	.	-	.	gene_id "ENSMUSG00000101393.1"; transcript_id "ENSMUST00000186590.1"; gene_type "processed_transcript"; gene_name "Gm29447"; transcript_type "processed_transcript"; transcript_name "Gm29447-202"; exon_number 1; exon_id "ENSMUSE00001321859.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045926.1"; havana_transcript "OTTMUST00000119963.1";
mm10-chrY	HAVANA	exon	68669534	68669715	.	-	.	gene_id "ENSMUSG00000101393.1"; transcript_id "ENSMUST00000186590.1"; gene_type "processed_transcript"; gene_name "Gm29447"; transcript_type "processed_transcript"; transcript_name "Gm29447-202"; exon_number 2; exon_id "ENSMUSE00001322454.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045926.1"; havana_transcript "OTTMUST00000119963.1";
mm10-chrY	HAVANA	exon	68668026	68668094	.	-	.	gene_id "ENSMUSG00000101393.1"; transcript_id "ENSMUST00000186590.1"; gene_type "processed_transcript"; gene_name "Gm29447"; transcript_type "processed_transcript"; transcript_name "Gm29447-202"; exon_number 3; exon_id "ENSMUSE00001328769.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045926.1"; havana_transcript "OTTMUST00000119963.1";
mm10-chrY	HAVANA	gene	68702856	68706197	.	+	.	gene_id "ENSMUSG00000100885.1"; gene_type "lincRNA"; gene_name "Gm29446"; level 2; havana_gene "OTTMUSG00000045927.1";
mm10-chrY	HAVANA	transcript	68702856	68706197	.	+	.	gene_id "ENSMUSG00000100885.1"; transcript_id "ENSMUST00000190887.1"; gene_type "lincRNA"; gene_name "Gm29446"; transcript_type "lincRNA"; transcript_name "Gm29446-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045927.1"; havana_transcript "OTTMUST00000119964.1";
mm10-chrY	HAVANA	exon	68702856	68703078	.	+	.	gene_id "ENSMUSG00000100885.1"; transcript_id "ENSMUST00000190887.1"; gene_type "lincRNA"; gene_name "Gm29446"; transcript_type "lincRNA"; transcript_name "Gm29446-201"; exon_number 1; exon_id "ENSMUSE00001325599.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045927.1"; havana_transcript "OTTMUST00000119964.1";
mm10-chrY	HAVANA	exon	68704255	68706197	.	+	.	gene_id "ENSMUSG00000100885.1"; transcript_id "ENSMUST00000190887.1"; gene_type "lincRNA"; gene_name "Gm29446"; transcript_type "lincRNA"; transcript_name "Gm29446-201"; exon_number 2; exon_id "ENSMUSE00001330436.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000045927.1"; havana_transcript "OTTMUST00000119964.1";
mm10-chrY	HAVANA	gene	68707611	68707923	.	+	.	gene_id "ENSMUSG00000101120.1"; gene_type "processed_pseudogene"; gene_name "Gm29452"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045928.1";
mm10-chrY	HAVANA	transcript	68707611	68707923	.	+	.	gene_id "ENSMUSG00000101120.1"; transcript_id "ENSMUST00000187996.1"; gene_type "processed_pseudogene"; gene_name "Gm29452"; transcript_type "processed_pseudogene"; transcript_name "Gm29452-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045928.1"; havana_transcript "OTTMUST00000119965.1";
mm10-chrY	HAVANA	exon	68707611	68707923	.	+	.	gene_id "ENSMUSG00000101120.1"; transcript_id "ENSMUST00000187996.1"; gene_type "processed_pseudogene"; gene_name "Gm29452"; transcript_type "processed_pseudogene"; transcript_name "Gm29452-201"; exon_number 1; exon_id "ENSMUSE00001326364.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045928.1"; havana_transcript "OTTMUST00000119965.1";
mm10-chrY	HAVANA	gene	68744295	68744990	.	+	.	gene_id "ENSMUSG00000101216.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29451"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045929.1";
mm10-chrY	HAVANA	transcript	68744295	68744990	.	+	.	gene_id "ENSMUSG00000101216.1"; transcript_id "ENSMUST00000188862.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29451"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29451-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045929.1"; havana_transcript "OTTMUST00000119966.1";
mm10-chrY	HAVANA	exon	68744295	68744990	.	+	.	gene_id "ENSMUSG00000101216.1"; transcript_id "ENSMUST00000188862.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29451"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29451-201"; exon_number 1; exon_id "ENSMUSE00001330706.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045929.1"; havana_transcript "OTTMUST00000119966.1";
mm10-chrY	HAVANA	gene	68806596	68832728	.	-	.	gene_id "ENSMUSG00000100032.1"; gene_type "protein_coding"; gene_name "Gm20817"; level 2; havana_gene "OTTMUSG00000045930.1";
mm10-chrY	HAVANA	transcript	68806596	68832728	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	exon	68832685	68832728	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 1; exon_id "ENSMUSE00001333115.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	exon	68831189	68831320	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 2; exon_id "ENSMUSE00001327978.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	CDS	68831189	68831306	.	-	0	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 2; exon_id "ENSMUSE00001327978.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	start_codon	68831304	68831306	.	-	0	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 2; exon_id "ENSMUSE00001327978.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	exon	68825796	68825862	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 3; exon_id "ENSMUSE00001334184.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	CDS	68825796	68825862	.	-	2	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 3; exon_id "ENSMUSE00001334184.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	exon	68825155	68825189	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 4; exon_id "ENSMUSE00001322816.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	CDS	68825155	68825189	.	-	1	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 4; exon_id "ENSMUSE00001322816.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	exon	68818073	68818139	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 5; exon_id "ENSMUSE00001331289.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	CDS	68818073	68818139	.	-	2	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 5; exon_id "ENSMUSE00001331289.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	exon	68817449	68817483	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 6; exon_id "ENSMUSE00001326680.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	CDS	68817449	68817483	.	-	1	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 6; exon_id "ENSMUSE00001326680.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	exon	68810182	68810299	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 7; exon_id "ENSMUSE00001320230.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	CDS	68810182	68810299	.	-	2	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 7; exon_id "ENSMUSE00001320230.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	exon	68809312	68809411	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 8; exon_id "ENSMUSE00001325983.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	CDS	68809312	68809411	.	-	1	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 8; exon_id "ENSMUSE00001325983.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	exon	68807181	68807279	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 9; exon_id "ENSMUSE00001321168.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	CDS	68807181	68807279	.	-	0	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 9; exon_id "ENSMUSE00001321168.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	exon	68806596	68806821	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 10; exon_id "ENSMUSE00001329435.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	CDS	68806795	68806821	.	-	0	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 10; exon_id "ENSMUSE00001329435.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	stop_codon	68806792	68806794	.	-	0	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 10; exon_id "ENSMUSE00001329435.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	UTR	68832685	68832728	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 1; exon_id "ENSMUSE00001333115.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	UTR	68831307	68831320	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 2; exon_id "ENSMUSE00001327978.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	UTR	68806596	68806794	.	-	.	gene_id "ENSMUSG00000100032.1"; transcript_id "ENSMUST00000191123.1"; gene_type "protein_coding"; gene_name "Gm20817"; transcript_type "protein_coding"; transcript_name "Gm20817-201"; exon_number 10; exon_id "ENSMUSE00001329435.1"; level 2; protein_id "ENSMUSP00000140565.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045930.1"; havana_transcript "OTTMUST00000119969.1";
mm10-chrY	HAVANA	gene	68898829	68901325	.	-	.	gene_id "ENSMUSG00000101080.1"; gene_type "lincRNA"; gene_name "Gm28633"; level 2; havana_gene "OTTMUSG00000045961.1";
mm10-chrY	HAVANA	transcript	68898829	68901325	.	-	.	gene_id "ENSMUSG00000101080.1"; transcript_id "ENSMUST00000190867.1"; gene_type "lincRNA"; gene_name "Gm28633"; transcript_type "lincRNA"; transcript_name "Gm28633-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045961.1"; havana_transcript "OTTMUST00000120086.1";
mm10-chrY	HAVANA	exon	68900685	68901325	.	-	.	gene_id "ENSMUSG00000101080.1"; transcript_id "ENSMUST00000190867.1"; gene_type "lincRNA"; gene_name "Gm28633"; transcript_type "lincRNA"; transcript_name "Gm28633-202"; exon_number 1; exon_id "ENSMUSE00001333850.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045961.1"; havana_transcript "OTTMUST00000120086.1";
mm10-chrY	HAVANA	exon	68899845	68900199	.	-	.	gene_id "ENSMUSG00000101080.1"; transcript_id "ENSMUST00000190867.1"; gene_type "lincRNA"; gene_name "Gm28633"; transcript_type "lincRNA"; transcript_name "Gm28633-202"; exon_number 2; exon_id "ENSMUSE00001322056.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045961.1"; havana_transcript "OTTMUST00000120086.1";
mm10-chrY	HAVANA	exon	68898829	68899317	.	-	.	gene_id "ENSMUSG00000101080.1"; transcript_id "ENSMUST00000190867.1"; gene_type "lincRNA"; gene_name "Gm28633"; transcript_type "lincRNA"; transcript_name "Gm28633-202"; exon_number 3; exon_id "ENSMUSE00001334673.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045961.1"; havana_transcript "OTTMUST00000120086.1";
mm10-chrY	HAVANA	transcript	68899249	68900872	.	-	.	gene_id "ENSMUSG00000101080.1"; transcript_id "ENSMUST00000187906.1"; gene_type "lincRNA"; gene_name "Gm28633"; transcript_type "lincRNA"; transcript_name "Gm28633-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045961.1"; havana_transcript "OTTMUST00000120087.1";
mm10-chrY	HAVANA	exon	68900685	68900872	.	-	.	gene_id "ENSMUSG00000101080.1"; transcript_id "ENSMUST00000187906.1"; gene_type "lincRNA"; gene_name "Gm28633"; transcript_type "lincRNA"; transcript_name "Gm28633-201"; exon_number 1; exon_id "ENSMUSE00001333448.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045961.1"; havana_transcript "OTTMUST00000120087.1";
mm10-chrY	HAVANA	exon	68899845	68900195	.	-	.	gene_id "ENSMUSG00000101080.1"; transcript_id "ENSMUST00000187906.1"; gene_type "lincRNA"; gene_name "Gm28633"; transcript_type "lincRNA"; transcript_name "Gm28633-201"; exon_number 2; exon_id "ENSMUSE00001332784.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045961.1"; havana_transcript "OTTMUST00000120087.1";
mm10-chrY	HAVANA	exon	68899249	68899317	.	-	.	gene_id "ENSMUSG00000101080.1"; transcript_id "ENSMUST00000187906.1"; gene_type "lincRNA"; gene_name "Gm28633"; transcript_type "lincRNA"; transcript_name "Gm28633-201"; exon_number 3; exon_id "ENSMUSE00001329669.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045961.1"; havana_transcript "OTTMUST00000120087.1";
mm10-chrY	HAVANA	gene	68951290	68951983	.	+	.	gene_id "ENSMUSG00000100308.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29410"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045950.1";
mm10-chrY	HAVANA	transcript	68951290	68951983	.	+	.	gene_id "ENSMUSG00000100308.1"; transcript_id "ENSMUST00000188383.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29410"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29410-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045950.1"; havana_transcript "OTTMUST00000120056.1";
mm10-chrY	HAVANA	exon	68951290	68951983	.	+	.	gene_id "ENSMUSG00000100308.1"; transcript_id "ENSMUST00000188383.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29410"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29410-201"; exon_number 1; exon_id "ENSMUSE00001333327.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045950.1"; havana_transcript "OTTMUST00000120056.1";
mm10-chrY	HAVANA	gene	68986605	68997200	.	+	.	gene_id "ENSMUSG00000101106.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045951.1";
mm10-chrY	HAVANA	transcript	68986605	68996702	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000186691.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120057.1";
mm10-chrY	HAVANA	exon	68986605	68986741	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000186691.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-201"; exon_number 1; exon_id "ENSMUSE00001329802.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120057.1";
mm10-chrY	HAVANA	exon	68995974	68996107	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000186691.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-201"; exon_number 2; exon_id "ENSMUSE00001321389.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120057.1";
mm10-chrY	HAVANA	exon	68996402	68996702	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000186691.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-201"; exon_number 3; exon_id "ENSMUSE00001321719.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120057.1";
mm10-chrY	HAVANA	transcript	68986661	68990897	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000188291.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-205"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120058.1";
mm10-chrY	HAVANA	exon	68986661	68986741	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000188291.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-205"; exon_number 1; exon_id "ENSMUSE00001331433.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120058.1";
mm10-chrY	HAVANA	exon	68988054	68988290	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000188291.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-205"; exon_number 2; exon_id "ENSMUSE00001325317.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120058.1";
mm10-chrY	HAVANA	exon	68990129	68990312	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000188291.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-205"; exon_number 3; exon_id "ENSMUSE00001318446.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120058.1";
mm10-chrY	HAVANA	exon	68990828	68990897	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000188291.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-205"; exon_number 4; exon_id "ENSMUSE00001328330.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120058.1";
mm10-chrY	HAVANA	transcript	68986694	68990897	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000190079.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-207"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120059.1";
mm10-chrY	HAVANA	exon	68986694	68986741	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000190079.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-207"; exon_number 1; exon_id "ENSMUSE00001324767.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120059.1";
mm10-chrY	HAVANA	exon	68990129	68990312	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000190079.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-207"; exon_number 2; exon_id "ENSMUSE00001318446.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120059.1";
mm10-chrY	HAVANA	exon	68990828	68990897	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000190079.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-207"; exon_number 3; exon_id "ENSMUSE00001328330.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120059.1";
mm10-chrY	HAVANA	transcript	68986706	68990271	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187843.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120060.1";
mm10-chrY	HAVANA	exon	68986706	68986741	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187843.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-203"; exon_number 1; exon_id "ENSMUSE00001328459.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120060.1";
mm10-chrY	HAVANA	exon	68989216	68989433	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187843.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-203"; exon_number 2; exon_id "ENSMUSE00001334544.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120060.1";
mm10-chrY	HAVANA	exon	68990129	68990271	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187843.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-203"; exon_number 3; exon_id "ENSMUSE00001319886.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120060.1";
mm10-chrY	HAVANA	transcript	68988197	68988811	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000188816.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28819-206"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120061.1";
mm10-chrY	HAVANA	exon	68988197	68988811	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000188816.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28819-206"; exon_number 1; exon_id "ENSMUSE00001323720.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120061.1";
mm10-chrY	HAVANA	transcript	68988634	68990869	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000190333.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-208"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120062.1";
mm10-chrY	HAVANA	exon	68988634	68988731	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000190333.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-208"; exon_number 1; exon_id "ENSMUSE00001326487.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120062.1";
mm10-chrY	HAVANA	exon	68990129	68990312	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000190333.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-208"; exon_number 2; exon_id "ENSMUSE00001318446.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120062.1";
mm10-chrY	HAVANA	exon	68990828	68990869	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000190333.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-208"; exon_number 3; exon_id "ENSMUSE00001329727.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120062.1";
mm10-chrY	HAVANA	transcript	68988634	68990869	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187974.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-204"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120063.1";
mm10-chrY	HAVANA	exon	68988634	68988731	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187974.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-204"; exon_number 1; exon_id "ENSMUSE00001326487.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120063.1";
mm10-chrY	HAVANA	exon	68989216	68989433	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187974.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-204"; exon_number 2; exon_id "ENSMUSE00001334544.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120063.1";
mm10-chrY	HAVANA	exon	68990129	68990312	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187974.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-204"; exon_number 3; exon_id "ENSMUSE00001318446.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120063.1";
mm10-chrY	HAVANA	exon	68990828	68990869	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187974.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-204"; exon_number 4; exon_id "ENSMUSE00001329727.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120063.1";
mm10-chrY	HAVANA	transcript	68989216	68997200	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187416.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120064.1";
mm10-chrY	HAVANA	exon	68989216	68989433	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187416.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-202"; exon_number 1; exon_id "ENSMUSE00001334544.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120064.1";
mm10-chrY	HAVANA	exon	68990129	68990312	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187416.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-202"; exon_number 2; exon_id "ENSMUSE00001318446.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120064.1";
mm10-chrY	HAVANA	exon	68995974	68996107	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187416.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-202"; exon_number 3; exon_id "ENSMUSE00001321389.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120064.1";
mm10-chrY	HAVANA	exon	68996402	68997200	.	+	.	gene_id "ENSMUSG00000101106.6"; transcript_id "ENSMUST00000187416.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28819"; transcript_type "processed_transcript"; transcript_name "Gm28819-202"; exon_number 4; exon_id "ENSMUSE00001320679.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045951.1"; havana_transcript "OTTMUST00000120064.1";
mm10-chrY	HAVANA	gene	68999952	69001511	.	-	.	gene_id "ENSMUSG00000102119.6"; gene_type "lincRNA"; gene_name "Gm28462"; level 2; havana_gene "OTTMUSG00000045931.1";
mm10-chrY	HAVANA	transcript	68999952	69001497	.	-	.	gene_id "ENSMUSG00000102119.6"; transcript_id "ENSMUST00000188058.6"; gene_type "lincRNA"; gene_name "Gm28462"; transcript_type "lincRNA"; transcript_name "Gm28462-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045931.1"; havana_transcript "OTTMUST00000119970.1";
mm10-chrY	HAVANA	exon	69001454	69001497	.	-	.	gene_id "ENSMUSG00000102119.6"; transcript_id "ENSMUST00000188058.6"; gene_type "lincRNA"; gene_name "Gm28462"; transcript_type "lincRNA"; transcript_name "Gm28462-202"; exon_number 1; exon_id "ENSMUSE00001325544.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045931.1"; havana_transcript "OTTMUST00000119970.1";
mm10-chrY	HAVANA	exon	68999952	69000089	.	-	.	gene_id "ENSMUSG00000102119.6"; transcript_id "ENSMUST00000188058.6"; gene_type "lincRNA"; gene_name "Gm28462"; transcript_type "lincRNA"; transcript_name "Gm28462-202"; exon_number 2; exon_id "ENSMUSE00001328289.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045931.1"; havana_transcript "OTTMUST00000119970.1";
mm10-chrY	HAVANA	transcript	68999952	69001511	.	-	.	gene_id "ENSMUSG00000102119.6"; transcript_id "ENSMUST00000185217.1"; gene_type "lincRNA"; gene_name "Gm28462"; transcript_type "lincRNA"; transcript_name "Gm28462-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045931.1"; havana_transcript "OTTMUST00000119971.1";
mm10-chrY	HAVANA	exon	69001276	69001511	.	-	.	gene_id "ENSMUSG00000102119.6"; transcript_id "ENSMUST00000185217.1"; gene_type "lincRNA"; gene_name "Gm28462"; transcript_type "lincRNA"; transcript_name "Gm28462-201"; exon_number 1; exon_id "ENSMUSE00001325551.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045931.1"; havana_transcript "OTTMUST00000119971.1";
mm10-chrY	HAVANA	exon	68999952	69000089	.	-	.	gene_id "ENSMUSG00000102119.6"; transcript_id "ENSMUST00000185217.1"; gene_type "lincRNA"; gene_name "Gm28462"; transcript_type "lincRNA"; transcript_name "Gm28462-201"; exon_number 2; exon_id "ENSMUSE00001328289.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045931.1"; havana_transcript "OTTMUST00000119971.1";
mm10-chrY	HAVANA	gene	69017824	69018516	.	+	.	gene_id "ENSMUSG00000101147.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20818"; level 2; havana_gene "OTTMUSG00000045932.1";
mm10-chrY	HAVANA	transcript	69017824	69018516	.	+	.	gene_id "ENSMUSG00000101147.1"; transcript_id "ENSMUST00000190372.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20818"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20818-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045932.1"; havana_transcript "OTTMUST00000119972.1";
mm10-chrY	HAVANA	exon	69017824	69018516	.	+	.	gene_id "ENSMUSG00000101147.1"; transcript_id "ENSMUST00000190372.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20818"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20818-201"; exon_number 1; exon_id "ENSMUSE00001327857.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045932.1"; havana_transcript "OTTMUST00000119972.1";
mm10-chrY	HAVANA	gene	69092807	69093499	.	+	.	gene_id "ENSMUSG00000101143.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21151"; level 2; havana_gene "OTTMUSG00000045952.1";
mm10-chrY	HAVANA	transcript	69092807	69093499	.	+	.	gene_id "ENSMUSG00000101143.1"; transcript_id "ENSMUST00000191536.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21151"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21151-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045952.1"; havana_transcript "OTTMUST00000120065.1";
mm10-chrY	HAVANA	exon	69092807	69093499	.	+	.	gene_id "ENSMUSG00000101143.1"; transcript_id "ENSMUST00000191536.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21151"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21151-201"; exon_number 1; exon_id "ENSMUSE00001325534.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045952.1"; havana_transcript "OTTMUST00000120065.1";
mm10-chrY	HAVANA	gene	69200934	69203089	.	-	.	gene_id "ENSMUSG00000102005.6"; gene_type "lincRNA"; gene_name "Gm29409"; level 2; havana_gene "OTTMUSG00000045953.1";
mm10-chrY	HAVANA	transcript	69200934	69203089	.	-	.	gene_id "ENSMUSG00000102005.6"; transcript_id "ENSMUST00000189623.6"; gene_type "lincRNA"; gene_name "Gm29409"; transcript_type "lincRNA"; transcript_name "Gm29409-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045953.1"; havana_transcript "OTTMUST00000120066.1";
mm10-chrY	HAVANA	exon	69202862	69203089	.	-	.	gene_id "ENSMUSG00000102005.6"; transcript_id "ENSMUST00000189623.6"; gene_type "lincRNA"; gene_name "Gm29409"; transcript_type "lincRNA"; transcript_name "Gm29409-202"; exon_number 1; exon_id "ENSMUSE00001330167.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045953.1"; havana_transcript "OTTMUST00000120066.1";
mm10-chrY	HAVANA	exon	69201949	69202132	.	-	.	gene_id "ENSMUSG00000102005.6"; transcript_id "ENSMUST00000189623.6"; gene_type "lincRNA"; gene_name "Gm29409"; transcript_type "lincRNA"; transcript_name "Gm29409-202"; exon_number 2; exon_id "ENSMUSE00001322823.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045953.1"; havana_transcript "OTTMUST00000120066.1";
mm10-chrY	HAVANA	exon	69200934	69201422	.	-	.	gene_id "ENSMUSG00000102005.6"; transcript_id "ENSMUST00000189623.6"; gene_type "lincRNA"; gene_name "Gm29409"; transcript_type "lincRNA"; transcript_name "Gm29409-202"; exon_number 3; exon_id "ENSMUSE00001329984.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045953.1"; havana_transcript "OTTMUST00000120066.1";
mm10-chrY	HAVANA	transcript	69201354	69203089	.	-	.	gene_id "ENSMUSG00000102005.6"; transcript_id "ENSMUST00000187878.1"; gene_type "lincRNA"; gene_name "Gm29409"; transcript_type "lincRNA"; transcript_name "Gm29409-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045953.1"; havana_transcript "OTTMUST00000120067.1";
mm10-chrY	HAVANA	exon	69202862	69203089	.	-	.	gene_id "ENSMUSG00000102005.6"; transcript_id "ENSMUST00000187878.1"; gene_type "lincRNA"; gene_name "Gm29409"; transcript_type "lincRNA"; transcript_name "Gm29409-201"; exon_number 1; exon_id "ENSMUSE00001330167.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045953.1"; havana_transcript "OTTMUST00000120067.1";
mm10-chrY	HAVANA	exon	69201354	69201422	.	-	.	gene_id "ENSMUSG00000102005.6"; transcript_id "ENSMUST00000187878.1"; gene_type "lincRNA"; gene_name "Gm29409"; transcript_type "lincRNA"; transcript_name "Gm29409-201"; exon_number 2; exon_id "ENSMUSE00001325162.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045953.1"; havana_transcript "OTTMUST00000120067.1";
mm10-chrY	HAVANA	gene	69241518	69244757	.	-	.	gene_id "ENSMUSG00000101491.1"; gene_type "lincRNA"; gene_name "Gm28632"; level 2; havana_gene "OTTMUSG00000045962.1";
mm10-chrY	HAVANA	transcript	69241518	69244757	.	-	.	gene_id "ENSMUSG00000101491.1"; transcript_id "ENSMUST00000191193.1"; gene_type "lincRNA"; gene_name "Gm28632"; transcript_type "lincRNA"; transcript_name "Gm28632-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045962.1"; havana_transcript "OTTMUST00000120088.1";
mm10-chrY	HAVANA	exon	69244118	69244757	.	-	.	gene_id "ENSMUSG00000101491.1"; transcript_id "ENSMUST00000191193.1"; gene_type "lincRNA"; gene_name "Gm28632"; transcript_type "lincRNA"; transcript_name "Gm28632-202"; exon_number 1; exon_id "ENSMUSE00001321690.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045962.1"; havana_transcript "OTTMUST00000120088.1";
mm10-chrY	HAVANA	exon	69243447	69243632	.	-	.	gene_id "ENSMUSG00000101491.1"; transcript_id "ENSMUST00000191193.1"; gene_type "lincRNA"; gene_name "Gm28632"; transcript_type "lincRNA"; transcript_name "Gm28632-202"; exon_number 2; exon_id "ENSMUSE00001327867.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045962.1"; havana_transcript "OTTMUST00000120088.1";
mm10-chrY	HAVANA	exon	69242534	69242717	.	-	.	gene_id "ENSMUSG00000101491.1"; transcript_id "ENSMUST00000191193.1"; gene_type "lincRNA"; gene_name "Gm28632"; transcript_type "lincRNA"; transcript_name "Gm28632-202"; exon_number 3; exon_id "ENSMUSE00001332874.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045962.1"; havana_transcript "OTTMUST00000120088.1";
mm10-chrY	HAVANA	exon	69241518	69242006	.	-	.	gene_id "ENSMUSG00000101491.1"; transcript_id "ENSMUST00000191193.1"; gene_type "lincRNA"; gene_name "Gm28632"; transcript_type "lincRNA"; transcript_name "Gm28632-202"; exon_number 4; exon_id "ENSMUSE00001320003.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045962.1"; havana_transcript "OTTMUST00000120088.1";
mm10-chrY	HAVANA	transcript	69241938	69244304	.	-	.	gene_id "ENSMUSG00000101491.1"; transcript_id "ENSMUST00000189418.1"; gene_type "lincRNA"; gene_name "Gm28632"; transcript_type "lincRNA"; transcript_name "Gm28632-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045962.1"; havana_transcript "OTTMUST00000120089.1";
mm10-chrY	HAVANA	exon	69244118	69244304	.	-	.	gene_id "ENSMUSG00000101491.1"; transcript_id "ENSMUST00000189418.1"; gene_type "lincRNA"; gene_name "Gm28632"; transcript_type "lincRNA"; transcript_name "Gm28632-201"; exon_number 1; exon_id "ENSMUSE00001319613.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045962.1"; havana_transcript "OTTMUST00000120089.1";
mm10-chrY	HAVANA	exon	69243447	69243628	.	-	.	gene_id "ENSMUSG00000101491.1"; transcript_id "ENSMUST00000189418.1"; gene_type "lincRNA"; gene_name "Gm28632"; transcript_type "lincRNA"; transcript_name "Gm28632-201"; exon_number 2; exon_id "ENSMUSE00001332392.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045962.1"; havana_transcript "OTTMUST00000120089.1";
mm10-chrY	HAVANA	exon	69241938	69242006	.	-	.	gene_id "ENSMUSG00000101491.1"; transcript_id "ENSMUST00000189418.1"; gene_type "lincRNA"; gene_name "Gm28632"; transcript_type "lincRNA"; transcript_name "Gm28632-201"; exon_number 3; exon_id "ENSMUSE00001331548.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045962.1"; havana_transcript "OTTMUST00000120089.1";
mm10-chrY	HAVANA	gene	69286102	69286798	.	+	.	gene_id "ENSMUSG00000100624.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28101"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045954.1";
mm10-chrY	HAVANA	transcript	69286102	69286798	.	+	.	gene_id "ENSMUSG00000100624.1"; transcript_id "ENSMUST00000187608.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28101"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28101-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045954.1"; havana_transcript "OTTMUST00000120068.1";
mm10-chrY	HAVANA	exon	69286102	69286798	.	+	.	gene_id "ENSMUSG00000100624.1"; transcript_id "ENSMUST00000187608.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28101"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28101-201"; exon_number 1; exon_id "ENSMUSE00001331413.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045954.1"; havana_transcript "OTTMUST00000120068.1";
mm10-chrY	HAVANA	gene	69321132	69331861	.	+	.	gene_id "ENSMUSG00000102388.5"; gene_type "protein_coding"; gene_name "Gm33815"; level 2; havana_gene "OTTMUSG00000045955.3";
mm10-chrY	HAVANA	transcript	69321132	69323494	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195574.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "protein_coding"; transcript_name "Gm33815-205"; level 2; protein_id "ENSMUSP00000141626.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120071.2";
mm10-chrY	HAVANA	exon	69321132	69321323	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195574.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "protein_coding"; transcript_name "Gm33815-205"; exon_number 1; exon_id "ENSMUSE00001339596.1"; level 2; protein_id "ENSMUSP00000141626.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120071.2";
mm10-chrY	HAVANA	exon	69321548	69321734	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195574.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "protein_coding"; transcript_name "Gm33815-205"; exon_number 2; exon_id "ENSMUSE00001343614.1"; level 2; protein_id "ENSMUSP00000141626.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120071.2";
mm10-chrY	HAVANA	exon	69322670	69323494	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195574.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "protein_coding"; transcript_name "Gm33815-205"; exon_number 3; exon_id "ENSMUSE00001345028.1"; level 2; protein_id "ENSMUSP00000141626.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120071.2";
mm10-chrY	HAVANA	CDS	69322813	69323340	.	+	0	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195574.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "protein_coding"; transcript_name "Gm33815-205"; exon_number 3; exon_id "ENSMUSE00001345028.1"; level 2; protein_id "ENSMUSP00000141626.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120071.2";
mm10-chrY	HAVANA	start_codon	69322813	69322815	.	+	0	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195574.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "protein_coding"; transcript_name "Gm33815-205"; exon_number 3; exon_id "ENSMUSE00001345028.1"; level 2; protein_id "ENSMUSP00000141626.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120071.2";
mm10-chrY	HAVANA	stop_codon	69323341	69323343	.	+	0	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195574.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "protein_coding"; transcript_name "Gm33815-205"; exon_number 3; exon_id "ENSMUSE00001345028.1"; level 2; protein_id "ENSMUSP00000141626.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120071.2";
mm10-chrY	HAVANA	UTR	69321132	69321323	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195574.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "protein_coding"; transcript_name "Gm33815-205"; exon_number 1; exon_id "ENSMUSE00001339596.1"; level 2; protein_id "ENSMUSP00000141626.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120071.2";
mm10-chrY	HAVANA	UTR	69321548	69321734	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195574.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "protein_coding"; transcript_name "Gm33815-205"; exon_number 2; exon_id "ENSMUSE00001343614.1"; level 2; protein_id "ENSMUSP00000141626.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120071.2";
mm10-chrY	HAVANA	UTR	69322670	69322812	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195574.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "protein_coding"; transcript_name "Gm33815-205"; exon_number 3; exon_id "ENSMUSE00001345028.1"; level 2; protein_id "ENSMUSP00000141626.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120071.2";
mm10-chrY	HAVANA	UTR	69323341	69323494	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195574.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "protein_coding"; transcript_name "Gm33815-205"; exon_number 3; exon_id "ENSMUSE00001345028.1"; level 2; protein_id "ENSMUSP00000141626.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120071.2";
mm10-chrY	HAVANA	transcript	69321188	69331861	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195504.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-204"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120090.1";
mm10-chrY	HAVANA	exon	69321188	69321323	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195504.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-204"; exon_number 1; exon_id "ENSMUSE00001166993.2"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120090.1";
mm10-chrY	HAVANA	exon	69323217	69323346	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195504.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-204"; exon_number 2; exon_id "ENSMUSE00001338368.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120090.1";
mm10-chrY	HAVANA	exon	69323831	69324047	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195504.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-204"; exon_number 3; exon_id "ENSMUSE00001344057.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120090.1";
mm10-chrY	HAVANA	exon	69324743	69324926	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195504.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-204"; exon_number 4; exon_id "ENSMUSE00001340528.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120090.1";
mm10-chrY	HAVANA	exon	69330636	69330769	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195504.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-204"; exon_number 5; exon_id "ENSMUSE00001343453.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120090.1";
mm10-chrY	HAVANA	exon	69331064	69331861	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000195504.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-204"; exon_number 6; exon_id "ENSMUSE00001343367.1"; level 2; transcript_support_level "1"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120090.1";
mm10-chrY	HAVANA	transcript	69321244	69325483	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	exon	69321244	69321323	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 1; exon_id "ENSMUSE00001339210.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	exon	69322670	69322906	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 2; exon_id "ENSMUSE00001339437.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	CDS	69322813	69322906	.	+	0	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 2; exon_id "ENSMUSE00001339437.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	start_codon	69322813	69322815	.	+	0	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 2; exon_id "ENSMUSE00001339437.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	exon	69324743	69324926	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 3; exon_id "ENSMUSE00001345329.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	CDS	69324743	69324777	.	+	2	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 3; exon_id "ENSMUSE00001345329.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	stop_codon	69324778	69324780	.	+	0	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 3; exon_id "ENSMUSE00001345329.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	exon	69325442	69325483	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 4; exon_id "ENSMUSE00001338195.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	UTR	69321244	69321323	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 1; exon_id "ENSMUSE00001339210.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	UTR	69322670	69322812	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 2; exon_id "ENSMUSE00001339437.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	UTR	69324778	69324926	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 3; exon_id "ENSMUSE00001345329.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	UTR	69325442	69325483	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193593.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm33815-202"; exon_number 4; exon_id "ENSMUSE00001338195.1"; level 2; protein_id "ENSMUSP00000142163.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120069.2";
mm10-chrY	HAVANA	transcript	69321270	69325509	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193313.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120070.1";
mm10-chrY	HAVANA	exon	69321270	69321323	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193313.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-201"; exon_number 1; exon_id "ENSMUSE00001336854.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120070.1";
mm10-chrY	HAVANA	exon	69323217	69323346	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193313.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-201"; exon_number 2; exon_id "ENSMUSE00001338368.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120070.1";
mm10-chrY	HAVANA	exon	69323831	69324047	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193313.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-201"; exon_number 3; exon_id "ENSMUSE00001344057.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120070.1";
mm10-chrY	HAVANA	exon	69324743	69324926	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193313.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-201"; exon_number 4; exon_id "ENSMUSE00001340528.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120070.1";
mm10-chrY	HAVANA	exon	69325442	69325509	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000193313.5"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-201"; exon_number 5; exon_id "ENSMUSE00001345596.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120070.1";
mm10-chrY	HAVANA	transcript	69323249	69325483	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000194063.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-203"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120091.1";
mm10-chrY	HAVANA	exon	69323249	69323346	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000194063.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-203"; exon_number 1; exon_id "ENSMUSE00001341360.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120091.1";
mm10-chrY	HAVANA	exon	69324743	69324926	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000194063.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-203"; exon_number 2; exon_id "ENSMUSE00001340528.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120091.1";
mm10-chrY	HAVANA	exon	69325442	69325483	.	+	.	gene_id "ENSMUSG00000102388.5"; transcript_id "ENSMUST00000194063.1"; gene_type "protein_coding"; gene_name "Gm33815"; transcript_type "processed_transcript"; transcript_name "Gm33815-203"; exon_number 3; exon_id "ENSMUSE00001338195.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045955.3"; havana_transcript "OTTMUST00000120091.1";
mm10-chrY	HAVANA	gene	69352610	69353305	.	+	.	gene_id "ENSMUSG00000102131.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21160"; level 2; havana_gene "OTTMUSG00000045963.1";
mm10-chrY	HAVANA	transcript	69352610	69353305	.	+	.	gene_id "ENSMUSG00000102131.1"; transcript_id "ENSMUST00000185838.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21160"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21160-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045963.1"; havana_transcript "OTTMUST00000120092.1";
mm10-chrY	HAVANA	exon	69352610	69353305	.	+	.	gene_id "ENSMUSG00000102131.1"; transcript_id "ENSMUST00000185838.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21160"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21160-201"; exon_number 1; exon_id "ENSMUSE00001332838.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045963.1"; havana_transcript "OTTMUST00000120092.1";
mm10-chrY	HAVANA	gene	69380245	69383755	.	+	.	gene_id "ENSMUSG00000094699.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm28637"; level 2; havana_gene "OTTMUSG00000045964.1";
mm10-chrY	HAVANA	transcript	69380245	69383755	.	+	.	gene_id "ENSMUSG00000094699.2"; transcript_id "ENSMUST00000179424.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm28637"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28637-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045964.1"; havana_transcript "OTTMUST00000120093.1";
mm10-chrY	HAVANA	exon	69380245	69380363	.	+	.	gene_id "ENSMUSG00000094699.2"; transcript_id "ENSMUST00000179424.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm28637"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28637-201"; exon_number 1; exon_id "ENSMUSE00001037600.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045964.1"; havana_transcript "OTTMUST00000120093.1";
mm10-chrY	HAVANA	exon	69381131	69381230	.	+	.	gene_id "ENSMUSG00000094699.2"; transcript_id "ENSMUST00000179424.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm28637"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28637-201"; exon_number 2; exon_id "ENSMUSE00001002776.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045964.1"; havana_transcript "OTTMUST00000120093.1";
mm10-chrY	HAVANA	exon	69383271	69383369	.	+	.	gene_id "ENSMUSG00000094699.2"; transcript_id "ENSMUST00000179424.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm28637"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28637-201"; exon_number 3; exon_id "ENSMUSE00001081340.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045964.1"; havana_transcript "OTTMUST00000120093.1";
mm10-chrY	HAVANA	exon	69383729	69383755	.	+	.	gene_id "ENSMUSG00000094699.2"; transcript_id "ENSMUST00000179424.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm28637"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28637-201"; exon_number 4; exon_id "ENSMUSE00001078290.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045964.1"; havana_transcript "OTTMUST00000120093.1";
mm10-chrY	HAVANA	gene	69449055	69449750	.	-	.	gene_id "ENSMUSG00000100659.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28636"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045965.1";
mm10-chrY	HAVANA	transcript	69449055	69449750	.	-	.	gene_id "ENSMUSG00000100659.1"; transcript_id "ENSMUST00000186353.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28636"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28636-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045965.1"; havana_transcript "OTTMUST00000120094.1";
mm10-chrY	HAVANA	exon	69449055	69449750	.	-	.	gene_id "ENSMUSG00000100659.1"; transcript_id "ENSMUST00000186353.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28636"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28636-201"; exon_number 1; exon_id "ENSMUSE00001332663.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045965.1"; havana_transcript "OTTMUST00000120094.1";
mm10-chrY	HAVANA	gene	69625824	69626517	.	-	.	gene_id "ENSMUSG00000101254.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20932"; level 2; havana_gene "OTTMUSG00000045988.1";
mm10-chrY	HAVANA	transcript	69625824	69626517	.	-	.	gene_id "ENSMUSG00000101254.1"; transcript_id "ENSMUST00000189115.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20932"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20932-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045988.1"; havana_transcript "OTTMUST00000120124.1";
mm10-chrY	HAVANA	exon	69625824	69626517	.	-	.	gene_id "ENSMUSG00000101254.1"; transcript_id "ENSMUST00000189115.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20932"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20932-201"; exon_number 1; exon_id "ENSMUSE00001333708.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045988.1"; havana_transcript "OTTMUST00000120124.1";
mm10-chrY	HAVANA	gene	69670176	69670660	.	+	.	gene_id "ENSMUSG00000100976.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29134"; level 2; havana_gene "OTTMUSG00000045989.1";
mm10-chrY	HAVANA	transcript	69670176	69670660	.	+	.	gene_id "ENSMUSG00000100976.1"; transcript_id "ENSMUST00000186579.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29134"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29134-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045989.1"; havana_transcript "OTTMUST00000120125.1";
mm10-chrY	HAVANA	exon	69670176	69670274	.	+	.	gene_id "ENSMUSG00000100976.1"; transcript_id "ENSMUST00000186579.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29134"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29134-201"; exon_number 1; exon_id "ENSMUSE00001325552.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045989.1"; havana_transcript "OTTMUST00000120125.1";
mm10-chrY	HAVANA	exon	69670634	69670660	.	+	.	gene_id "ENSMUSG00000100976.1"; transcript_id "ENSMUST00000186579.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29134"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29134-201"; exon_number 2; exon_id "ENSMUSE00001335316.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045989.1"; havana_transcript "OTTMUST00000120125.1";
mm10-chrY	HAVANA	gene	69736260	69737006	.	-	.	gene_id "ENSMUSG00000100489.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28303"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045990.1";
mm10-chrY	HAVANA	transcript	69736260	69737006	.	-	.	gene_id "ENSMUSG00000100489.1"; transcript_id "ENSMUST00000185642.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28303"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28303-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045990.1"; havana_transcript "OTTMUST00000120126.1";
mm10-chrY	HAVANA	exon	69736260	69737006	.	-	.	gene_id "ENSMUSG00000100489.1"; transcript_id "ENSMUST00000185642.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28303"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28303-201"; exon_number 1; exon_id "ENSMUSE00001322336.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045990.1"; havana_transcript "OTTMUST00000120126.1";
mm10-chrY	HAVANA	gene	69764804	69765115	.	-	.	gene_id "ENSMUSG00000101239.1"; gene_type "processed_pseudogene"; gene_name "Gm28304"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045991.1";
mm10-chrY	HAVANA	transcript	69764804	69765115	.	-	.	gene_id "ENSMUSG00000101239.1"; transcript_id "ENSMUST00000185977.1"; gene_type "processed_pseudogene"; gene_name "Gm28304"; transcript_type "processed_pseudogene"; transcript_name "Gm28304-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045991.1"; havana_transcript "OTTMUST00000120127.1";
mm10-chrY	HAVANA	exon	69764804	69765115	.	-	.	gene_id "ENSMUSG00000101239.1"; transcript_id "ENSMUST00000185977.1"; gene_type "processed_pseudogene"; gene_name "Gm28304"; transcript_type "processed_pseudogene"; transcript_name "Gm28304-201"; exon_number 1; exon_id "ENSMUSE00001327970.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045991.1"; havana_transcript "OTTMUST00000120127.1";
mm10-chrY	HAVANA	gene	69766529	69769872	.	-	.	gene_id "ENSMUSG00000100971.1"; gene_type "lincRNA"; gene_name "Gm28824"; level 2; havana_gene "OTTMUSG00000045992.1";
mm10-chrY	HAVANA	transcript	69766529	69769872	.	-	.	gene_id "ENSMUSG00000100971.1"; transcript_id "ENSMUST00000187496.1"; gene_type "lincRNA"; gene_name "Gm28824"; transcript_type "lincRNA"; transcript_name "Gm28824-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045992.1"; havana_transcript "OTTMUST00000120128.1";
mm10-chrY	HAVANA	exon	69769650	69769872	.	-	.	gene_id "ENSMUSG00000100971.1"; transcript_id "ENSMUST00000187496.1"; gene_type "lincRNA"; gene_name "Gm28824"; transcript_type "lincRNA"; transcript_name "Gm28824-201"; exon_number 1; exon_id "ENSMUSE00001325638.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045992.1"; havana_transcript "OTTMUST00000120128.1";
mm10-chrY	HAVANA	exon	69766529	69768472	.	-	.	gene_id "ENSMUSG00000100971.1"; transcript_id "ENSMUST00000187496.1"; gene_type "lincRNA"; gene_name "Gm28824"; transcript_type "lincRNA"; transcript_name "Gm28824-201"; exon_number 2; exon_id "ENSMUSE00001334029.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045992.1"; havana_transcript "OTTMUST00000120128.1";
mm10-chrY	HAVANA	gene	69801845	69805081	.	+	.	gene_id "ENSMUSG00000099555.1"; gene_type "lincRNA"; gene_name "Gm28081"; level 2; havana_gene "OTTMUSG00000045993.1";
mm10-chrY	HAVANA	transcript	69801845	69805081	.	+	.	gene_id "ENSMUSG00000099555.1"; transcript_id "ENSMUST00000185321.1"; gene_type "lincRNA"; gene_name "Gm28081"; transcript_type "lincRNA"; transcript_name "Gm28081-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045993.1"; havana_transcript "OTTMUST00000120129.1";
mm10-chrY	HAVANA	exon	69801845	69802482	.	+	.	gene_id "ENSMUSG00000099555.1"; transcript_id "ENSMUST00000185321.1"; gene_type "lincRNA"; gene_name "Gm28081"; transcript_type "lincRNA"; transcript_name "Gm28081-201"; exon_number 1; exon_id "ENSMUSE00001320365.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045993.1"; havana_transcript "OTTMUST00000120129.1";
mm10-chrY	HAVANA	exon	69802968	69803153	.	+	.	gene_id "ENSMUSG00000099555.1"; transcript_id "ENSMUST00000185321.1"; gene_type "lincRNA"; gene_name "Gm28081"; transcript_type "lincRNA"; transcript_name "Gm28081-201"; exon_number 2; exon_id "ENSMUSE00001318543.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045993.1"; havana_transcript "OTTMUST00000120129.1";
mm10-chrY	HAVANA	exon	69803883	69804066	.	+	.	gene_id "ENSMUSG00000099555.1"; transcript_id "ENSMUST00000185321.1"; gene_type "lincRNA"; gene_name "Gm28081"; transcript_type "lincRNA"; transcript_name "Gm28081-201"; exon_number 3; exon_id "ENSMUSE00001331084.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045993.1"; havana_transcript "OTTMUST00000120129.1";
mm10-chrY	HAVANA	exon	69804593	69805081	.	+	.	gene_id "ENSMUSG00000099555.1"; transcript_id "ENSMUST00000185321.1"; gene_type "lincRNA"; gene_name "Gm28081"; transcript_type "lincRNA"; transcript_name "Gm28081-201"; exon_number 4; exon_id "ENSMUSE00001326069.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000045993.1"; havana_transcript "OTTMUST00000120129.1";
mm10-chrY	HAVANA	transcript	69802297	69804661	.	+	.	gene_id "ENSMUSG00000099555.1"; transcript_id "ENSMUST00000186461.1"; gene_type "lincRNA"; gene_name "Gm28081"; transcript_type "lincRNA"; transcript_name "Gm28081-202"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045993.1"; havana_transcript "OTTMUST00000120130.1";
mm10-chrY	HAVANA	exon	69802297	69802482	.	+	.	gene_id "ENSMUSG00000099555.1"; transcript_id "ENSMUST00000186461.1"; gene_type "lincRNA"; gene_name "Gm28081"; transcript_type "lincRNA"; transcript_name "Gm28081-202"; exon_number 1; exon_id "ENSMUSE00001333595.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045993.1"; havana_transcript "OTTMUST00000120130.1";
mm10-chrY	HAVANA	exon	69802972	69803153	.	+	.	gene_id "ENSMUSG00000099555.1"; transcript_id "ENSMUST00000186461.1"; gene_type "lincRNA"; gene_name "Gm28081"; transcript_type "lincRNA"; transcript_name "Gm28081-202"; exon_number 2; exon_id "ENSMUSE00001325425.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045993.1"; havana_transcript "OTTMUST00000120130.1";
mm10-chrY	HAVANA	exon	69804593	69804661	.	+	.	gene_id "ENSMUSG00000099555.1"; transcript_id "ENSMUST00000186461.1"; gene_type "lincRNA"; gene_name "Gm28081"; transcript_type "lincRNA"; transcript_name "Gm28081-202"; exon_number 3; exon_id "ENSMUSE00001329372.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000045993.1"; havana_transcript "OTTMUST00000120130.1";
mm10-chrY	HAVANA	gene	69908283	69909004	.	-	.	gene_id "ENSMUSG00000101369.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28080"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045994.1";
mm10-chrY	HAVANA	transcript	69908283	69909004	.	-	.	gene_id "ENSMUSG00000101369.1"; transcript_id "ENSMUST00000188552.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28080"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28080-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045994.1"; havana_transcript "OTTMUST00000120131.1";
mm10-chrY	HAVANA	exon	69908283	69909004	.	-	.	gene_id "ENSMUSG00000101369.1"; transcript_id "ENSMUST00000188552.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28080"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28080-201"; exon_number 1; exon_id "ENSMUSE00001333136.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045994.1"; havana_transcript "OTTMUST00000120131.1";
mm10-chrY	HAVANA	gene	69982864	69983559	.	-	.	gene_id "ENSMUSG00000101096.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21524"; level 2; havana_gene "OTTMUSG00000045995.1";
mm10-chrY	HAVANA	transcript	69982864	69983559	.	-	.	gene_id "ENSMUSG00000101096.1"; transcript_id "ENSMUST00000190499.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21524"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21524-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045995.1"; havana_transcript "OTTMUST00000120132.1";
mm10-chrY	HAVANA	exon	69982864	69983559	.	-	.	gene_id "ENSMUSG00000101096.1"; transcript_id "ENSMUST00000190499.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21524"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21524-201"; exon_number 1; exon_id "ENSMUSE00001321481.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045995.1"; havana_transcript "OTTMUST00000120132.1";
mm10-chrY	HAVANA	gene	70004208	70014899	.	-	.	gene_id "ENSMUSG00000099550.6"; gene_type "protein_coding"; gene_name "Gm28079"; level 2; havana_gene "OTTMUSG00000045996.4";
mm10-chrY	HAVANA	transcript	70004208	70014843	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000185688.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120133.1";
mm10-chrY	HAVANA	exon	70014708	70014843	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000185688.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-201"; exon_number 1; exon_id "ENSMUSE00001332326.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120133.1";
mm10-chrY	HAVANA	exon	70012701	70012830	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000185688.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-201"; exon_number 2; exon_id "ENSMUSE00001323374.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120133.1";
mm10-chrY	HAVANA	exon	70011999	70012216	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000185688.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-201"; exon_number 3; exon_id "ENSMUSE00001328796.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120133.1";
mm10-chrY	HAVANA	exon	70011120	70011303	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000185688.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-201"; exon_number 4; exon_id "ENSMUSE00001330690.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120133.1";
mm10-chrY	HAVANA	exon	70005300	70005433	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000185688.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-201"; exon_number 5; exon_id "ENSMUSE00001333491.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120133.1";
mm10-chrY	HAVANA	exon	70004208	70005005	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000185688.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-201"; exon_number 6; exon_id "ENSMUSE00001320348.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120133.1";
mm10-chrY	HAVANA	transcript	70010535	70014755	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000186763.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-204"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120134.1";
mm10-chrY	HAVANA	exon	70014708	70014755	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000186763.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-204"; exon_number 1; exon_id "ENSMUSE00001329963.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120134.1";
mm10-chrY	HAVANA	exon	70012701	70012830	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000186763.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-204"; exon_number 2; exon_id "ENSMUSE00001323374.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120134.1";
mm10-chrY	HAVANA	exon	70010535	70010604	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000186763.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-204"; exon_number 3; exon_id "ENSMUSE00001333623.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120134.1";
mm10-chrY	HAVANA	transcript	70010535	70014755	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188634.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-207"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120135.1";
mm10-chrY	HAVANA	exon	70014708	70014755	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188634.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-207"; exon_number 1; exon_id "ENSMUSE00001329963.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120135.1";
mm10-chrY	HAVANA	exon	70011120	70011303	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188634.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-207"; exon_number 2; exon_id "ENSMUSE00001330690.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120135.1";
mm10-chrY	HAVANA	exon	70010535	70010604	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188634.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-207"; exon_number 3; exon_id "ENSMUSE00001333623.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120135.1";
mm10-chrY	HAVANA	transcript	70010537	70014761	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000189328.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-208"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120136.1";
mm10-chrY	HAVANA	exon	70014708	70014761	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000189328.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-208"; exon_number 1; exon_id "ENSMUSE00001326962.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120136.1";
mm10-chrY	HAVANA	exon	70012701	70012830	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000189328.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-208"; exon_number 2; exon_id "ENSMUSE00001323374.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120136.1";
mm10-chrY	HAVANA	exon	70011999	70012216	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000189328.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-208"; exon_number 3; exon_id "ENSMUSE00001328796.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120136.1";
mm10-chrY	HAVANA	exon	70011120	70011303	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000189328.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-208"; exon_number 4; exon_id "ENSMUSE00001330690.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120136.1";
mm10-chrY	HAVANA	exon	70010537	70010604	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000189328.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-208"; exon_number 5; exon_id "ENSMUSE00001320475.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120136.1";
mm10-chrY	HAVANA	transcript	70010563	70012798	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000187271.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-205"; level 2; protein_id "ENSMUSP00000140429.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120137.2";
mm10-chrY	HAVANA	exon	70012701	70012798	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000187271.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-205"; exon_number 1; exon_id "ENSMUSE00001328574.1"; level 2; protein_id "ENSMUSP00000140429.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120137.2";
mm10-chrY	HAVANA	CDS	70012707	70012798	.	-	2	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000187271.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-205"; exon_number 1; exon_id "ENSMUSE00001328574.1"; level 2; protein_id "ENSMUSP00000140429.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120137.2";
mm10-chrY	HAVANA	stop_codon	70012704	70012706	.	-	0	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000187271.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-205"; exon_number 1; exon_id "ENSMUSE00001328574.1"; level 2; protein_id "ENSMUSP00000140429.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120137.2";
mm10-chrY	HAVANA	exon	70011120	70011303	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000187271.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-205"; exon_number 2; exon_id "ENSMUSE00001330690.1"; level 2; protein_id "ENSMUSP00000140429.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120137.2";
mm10-chrY	HAVANA	exon	70010563	70010604	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000187271.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-205"; exon_number 3; exon_id "ENSMUSE00001328380.1"; level 2; protein_id "ENSMUSP00000140429.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120137.2";
mm10-chrY	HAVANA	UTR	70012701	70012706	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000187271.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-205"; exon_number 1; exon_id "ENSMUSE00001328574.1"; level 2; protein_id "ENSMUSP00000140429.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120137.2";
mm10-chrY	HAVANA	UTR	70011120	70011303	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000187271.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-205"; exon_number 2; exon_id "ENSMUSE00001330690.1"; level 2; protein_id "ENSMUSP00000140429.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120137.2";
mm10-chrY	HAVANA	UTR	70010563	70010604	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000187271.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-205"; exon_number 3; exon_id "ENSMUSE00001328380.1"; level 2; protein_id "ENSMUSP00000140429.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120137.2";
mm10-chrY	HAVANA	transcript	70010563	70014786	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000186184.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-203"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120138.1";
mm10-chrY	HAVANA	exon	70014708	70014786	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000186184.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-203"; exon_number 1; exon_id "ENSMUSE00001329797.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120138.1";
mm10-chrY	HAVANA	exon	70010563	70010604	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000186184.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-203"; exon_number 2; exon_id "ENSMUSE00001328380.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120138.1";
mm10-chrY	HAVANA	transcript	70010563	70014787	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	exon	70014708	70014787	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 1; exon_id "ENSMUSE00001320691.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	exon	70013141	70013377	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 2; exon_id "ENSMUSE00001328265.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	CDS	70013141	70013234	.	-	0	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 2; exon_id "ENSMUSE00001328265.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	start_codon	70013232	70013234	.	-	0	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 2; exon_id "ENSMUSE00001328265.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	exon	70011120	70011303	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 3; exon_id "ENSMUSE00001333585.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	CDS	70011269	70011303	.	-	2	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 3; exon_id "ENSMUSE00001333585.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	stop_codon	70011266	70011268	.	-	0	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 3; exon_id "ENSMUSE00001333585.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	exon	70010563	70010604	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 4; exon_id "ENSMUSE00001328380.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	UTR	70014708	70014787	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 1; exon_id "ENSMUSE00001320691.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	UTR	70013235	70013377	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 2; exon_id "ENSMUSE00001328265.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	UTR	70011120	70011268	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 3; exon_id "ENSMUSE00001333585.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	UTR	70010563	70010604	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000190418.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm28079-209"; exon_number 4; exon_id "ENSMUSE00001328380.1"; level 2; protein_id "ENSMUSP00000139495.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120139.2";
mm10-chrY	HAVANA	transcript	70011161	70014743	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000186006.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120140.1";
mm10-chrY	HAVANA	exon	70014708	70014743	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000186006.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-202"; exon_number 1; exon_id "ENSMUSE00001320258.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120140.1";
mm10-chrY	HAVANA	exon	70011999	70012216	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000186006.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-202"; exon_number 2; exon_id "ENSMUSE00001328796.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120140.1";
mm10-chrY	HAVANA	exon	70011161	70011303	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000186006.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "processed_transcript"; transcript_name "Gm28079-202"; exon_number 3; exon_id "ENSMUSE00001323368.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120140.1";
mm10-chrY	HAVANA	transcript	70012553	70014865	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188554.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-206"; level 2; protein_id "ENSMUSP00000139506.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000126061.1";
mm10-chrY	HAVANA	exon	70014708	70014865	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188554.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-206"; exon_number 1; exon_id "ENSMUSE00001325535.1"; level 2; protein_id "ENSMUSP00000139506.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000126061.1";
mm10-chrY	HAVANA	exon	70014297	70014483	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188554.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-206"; exon_number 2; exon_id "ENSMUSE00001321044.1"; level 2; protein_id "ENSMUSP00000139506.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000126061.1";
mm10-chrY	HAVANA	exon	70012553	70013377	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188554.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-206"; exon_number 3; exon_id "ENSMUSE00001334973.1"; level 2; protein_id "ENSMUSP00000139506.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000126061.1";
mm10-chrY	HAVANA	CDS	70012707	70013234	.	-	0	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188554.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-206"; exon_number 3; exon_id "ENSMUSE00001334973.1"; level 2; protein_id "ENSMUSP00000139506.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000126061.1";
mm10-chrY	HAVANA	start_codon	70013232	70013234	.	-	0	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188554.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-206"; exon_number 3; exon_id "ENSMUSE00001334973.1"; level 2; protein_id "ENSMUSP00000139506.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000126061.1";
mm10-chrY	HAVANA	stop_codon	70012704	70012706	.	-	0	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188554.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-206"; exon_number 3; exon_id "ENSMUSE00001334973.1"; level 2; protein_id "ENSMUSP00000139506.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000126061.1";
mm10-chrY	HAVANA	UTR	70014708	70014865	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188554.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-206"; exon_number 1; exon_id "ENSMUSE00001325535.1"; level 2; protein_id "ENSMUSP00000139506.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000126061.1";
mm10-chrY	HAVANA	UTR	70014297	70014483	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188554.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-206"; exon_number 2; exon_id "ENSMUSE00001321044.1"; level 2; protein_id "ENSMUSP00000139506.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000126061.1";
mm10-chrY	HAVANA	UTR	70012553	70012706	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188554.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-206"; exon_number 3; exon_id "ENSMUSE00001334973.1"; level 2; protein_id "ENSMUSP00000139506.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000126061.1";
mm10-chrY	HAVANA	UTR	70013235	70013377	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000188554.6"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-206"; exon_number 3; exon_id "ENSMUSE00001334973.1"; level 2; protein_id "ENSMUSP00000139506.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000126061.1";
mm10-chrY	HAVANA	transcript	70013072	70014899	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000191151.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-210"; level 2; protein_id "ENSMUSP00000139670.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120142.4";
mm10-chrY	HAVANA	exon	70014708	70014899	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000191151.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-210"; exon_number 1; exon_id "ENSMUSE00001332540.1"; level 2; protein_id "ENSMUSP00000139670.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120142.4";
mm10-chrY	HAVANA	exon	70014297	70014483	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000191151.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-210"; exon_number 2; exon_id "ENSMUSE00001321044.1"; level 2; protein_id "ENSMUSP00000139670.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120142.4";
mm10-chrY	HAVANA	exon	70013072	70013377	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000191151.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-210"; exon_number 3; exon_id "ENSMUSE00001320276.1"; level 2; protein_id "ENSMUSP00000139670.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120142.4";
mm10-chrY	HAVANA	CDS	70013072	70013234	.	-	0	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000191151.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-210"; exon_number 3; exon_id "ENSMUSE00001320276.1"; level 2; protein_id "ENSMUSP00000139670.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120142.4";
mm10-chrY	HAVANA	start_codon	70013232	70013234	.	-	0	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000191151.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-210"; exon_number 3; exon_id "ENSMUSE00001320276.1"; level 2; protein_id "ENSMUSP00000139670.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120142.4";
mm10-chrY	HAVANA	UTR	70014708	70014899	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000191151.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-210"; exon_number 1; exon_id "ENSMUSE00001332540.1"; level 2; protein_id "ENSMUSP00000139670.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120142.4";
mm10-chrY	HAVANA	UTR	70014297	70014483	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000191151.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-210"; exon_number 2; exon_id "ENSMUSE00001321044.1"; level 2; protein_id "ENSMUSP00000139670.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120142.4";
mm10-chrY	HAVANA	UTR	70013235	70013377	.	-	.	gene_id "ENSMUSG00000099550.6"; transcript_id "ENSMUST00000191151.1"; gene_type "protein_coding"; gene_name "Gm28079"; transcript_type "protein_coding"; transcript_name "Gm28079-210"; exon_number 3; exon_id "ENSMUSE00001320276.1"; level 2; protein_id "ENSMUSP00000139670.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTMUSG00000045996.4"; havana_transcript "OTTMUST00000120142.4";
mm10-chrY	HAVANA	gene	70049469	70050165	.	-	.	gene_id "ENSMUSG00000102065.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28302"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045997.1";
mm10-chrY	HAVANA	transcript	70049469	70050165	.	-	.	gene_id "ENSMUSG00000102065.1"; transcript_id "ENSMUST00000187931.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28302"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28302-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045997.1"; havana_transcript "OTTMUST00000120143.1";
mm10-chrY	HAVANA	exon	70049469	70050165	.	-	.	gene_id "ENSMUSG00000102065.1"; transcript_id "ENSMUST00000187931.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28302"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28302-201"; exon_number 1; exon_id "ENSMUSE00001330088.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045997.1"; havana_transcript "OTTMUST00000120143.1";
mm10-chrY	HAVANA	gene	70089894	70093132	.	+	.	gene_id "ENSMUSG00000100278.1"; gene_type "lincRNA"; gene_name "Gm28082"; level 2; havana_gene "OTTMUSG00000045998.1";
mm10-chrY	HAVANA	transcript	70089894	70093132	.	+	.	gene_id "ENSMUSG00000100278.1"; transcript_id "ENSMUST00000185683.1"; gene_type "lincRNA"; gene_name "Gm28082"; transcript_type "lincRNA"; transcript_name "Gm28082-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045998.1"; havana_transcript "OTTMUST00000120144.1";
mm10-chrY	HAVANA	exon	70089894	70090533	.	+	.	gene_id "ENSMUSG00000100278.1"; transcript_id "ENSMUST00000185683.1"; gene_type "lincRNA"; gene_name "Gm28082"; transcript_type "lincRNA"; transcript_name "Gm28082-201"; exon_number 1; exon_id "ENSMUSE00001334107.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045998.1"; havana_transcript "OTTMUST00000120144.1";
mm10-chrY	HAVANA	exon	70091019	70091204	.	+	.	gene_id "ENSMUSG00000100278.1"; transcript_id "ENSMUST00000185683.1"; gene_type "lincRNA"; gene_name "Gm28082"; transcript_type "lincRNA"; transcript_name "Gm28082-201"; exon_number 2; exon_id "ENSMUSE00001335018.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045998.1"; havana_transcript "OTTMUST00000120144.1";
mm10-chrY	HAVANA	exon	70091934	70092117	.	+	.	gene_id "ENSMUSG00000100278.1"; transcript_id "ENSMUST00000185683.1"; gene_type "lincRNA"; gene_name "Gm28082"; transcript_type "lincRNA"; transcript_name "Gm28082-201"; exon_number 3; exon_id "ENSMUSE00001323468.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045998.1"; havana_transcript "OTTMUST00000120144.1";
mm10-chrY	HAVANA	exon	70092644	70093132	.	+	.	gene_id "ENSMUSG00000100278.1"; transcript_id "ENSMUST00000185683.1"; gene_type "lincRNA"; gene_name "Gm28082"; transcript_type "lincRNA"; transcript_name "Gm28082-201"; exon_number 4; exon_id "ENSMUSE00001331428.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000045998.1"; havana_transcript "OTTMUST00000120144.1";
mm10-chrY	HAVANA	transcript	70090348	70092712	.	+	.	gene_id "ENSMUSG00000100278.1"; transcript_id "ENSMUST00000190608.1"; gene_type "lincRNA"; gene_name "Gm28082"; transcript_type "lincRNA"; transcript_name "Gm28082-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045998.1"; havana_transcript "OTTMUST00000120145.1";
mm10-chrY	HAVANA	exon	70090348	70090533	.	+	.	gene_id "ENSMUSG00000100278.1"; transcript_id "ENSMUST00000190608.1"; gene_type "lincRNA"; gene_name "Gm28082"; transcript_type "lincRNA"; transcript_name "Gm28082-202"; exon_number 1; exon_id "ENSMUSE00001331908.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045998.1"; havana_transcript "OTTMUST00000120145.1";
mm10-chrY	HAVANA	exon	70091023	70091204	.	+	.	gene_id "ENSMUSG00000100278.1"; transcript_id "ENSMUST00000190608.1"; gene_type "lincRNA"; gene_name "Gm28082"; transcript_type "lincRNA"; transcript_name "Gm28082-202"; exon_number 2; exon_id "ENSMUSE00001333314.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045998.1"; havana_transcript "OTTMUST00000120145.1";
mm10-chrY	HAVANA	exon	70092644	70092712	.	+	.	gene_id "ENSMUSG00000100278.1"; transcript_id "ENSMUST00000190608.1"; gene_type "lincRNA"; gene_name "Gm28082"; transcript_type "lincRNA"; transcript_name "Gm28082-202"; exon_number 3; exon_id "ENSMUSE00001329583.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000045998.1"; havana_transcript "OTTMUST00000120145.1";
mm10-chrY	HAVANA	gene	70196838	70197533	.	-	.	gene_id "ENSMUSG00000100692.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21672"; level 2; havana_gene "OTTMUSG00000045999.1";
mm10-chrY	HAVANA	transcript	70196838	70197533	.	-	.	gene_id "ENSMUSG00000100692.1"; transcript_id "ENSMUST00000191609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21672"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21672-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045999.1"; havana_transcript "OTTMUST00000120146.1";
mm10-chrY	HAVANA	exon	70196838	70197533	.	-	.	gene_id "ENSMUSG00000100692.1"; transcript_id "ENSMUST00000191609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21672"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21672-201"; exon_number 1; exon_id "ENSMUSE00001318285.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000045999.1"; havana_transcript "OTTMUST00000120146.1";
mm10-chrY	HAVANA	gene	70271306	70273642	.	-	.	gene_id "ENSMUSG00000094052.2"; gene_type "protein_coding"; gene_name "Gm21118"; level 2; tag "overlapping_locus"; havana_gene "OTTMUSG00000046000.2";
mm10-chrY	HAVANA	transcript	70271306	70273642	.	-	.	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000187418.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-202"; level 2; protein_id "ENSMUSP00000140466.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2"; havana_transcript "OTTMUST00000120147.2";
mm10-chrY	HAVANA	exon	70273524	70273642	.	-	.	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000187418.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-202"; exon_number 1; exon_id "ENSMUSE00001335095.1"; level 2; protein_id "ENSMUSP00000140466.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2"; havana_transcript "OTTMUST00000120147.2";
mm10-chrY	HAVANA	exon	70271306	70272405	.	-	.	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000187418.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-202"; exon_number 2; exon_id "ENSMUSE00001322989.1"; level 2; protein_id "ENSMUSP00000140466.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2"; havana_transcript "OTTMUST00000120147.2";
mm10-chrY	HAVANA	CDS	70271444	70272124	.	-	0	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000187418.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-202"; exon_number 2; exon_id "ENSMUSE00001322989.1"; level 2; protein_id "ENSMUSP00000140466.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2"; havana_transcript "OTTMUST00000120147.2";
mm10-chrY	HAVANA	start_codon	70272122	70272124	.	-	0	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000187418.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-202"; exon_number 2; exon_id "ENSMUSE00001322989.1"; level 2; protein_id "ENSMUSP00000140466.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2"; havana_transcript "OTTMUST00000120147.2";
mm10-chrY	HAVANA	stop_codon	70271441	70271443	.	-	0	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000187418.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-202"; exon_number 2; exon_id "ENSMUSE00001322989.1"; level 2; protein_id "ENSMUSP00000140466.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2"; havana_transcript "OTTMUST00000120147.2";
mm10-chrY	HAVANA	UTR	70273524	70273642	.	-	.	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000187418.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-202"; exon_number 1; exon_id "ENSMUSE00001335095.1"; level 2; protein_id "ENSMUSP00000140466.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2"; havana_transcript "OTTMUST00000120147.2";
mm10-chrY	HAVANA	UTR	70271306	70271443	.	-	.	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000187418.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-202"; exon_number 2; exon_id "ENSMUSE00001322989.1"; level 2; protein_id "ENSMUSP00000140466.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2"; havana_transcript "OTTMUST00000120147.2";
mm10-chrY	HAVANA	UTR	70272125	70272405	.	-	.	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000187418.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-202"; exon_number 2; exon_id "ENSMUSE00001322989.1"; level 2; protein_id "ENSMUSP00000140466.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2"; havana_transcript "OTTMUST00000120147.2";
mm10-chrY	ENSEMBL	transcript	70271441	70272124	.	-	.	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000180179.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-201"; level 3; protein_id "ENSMUSP00000137343.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2";
mm10-chrY	ENSEMBL	exon	70271441	70272124	.	-	.	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000180179.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-201"; exon_number 1; exon_id "ENSMUSE00001090393.1"; level 3; protein_id "ENSMUSP00000137343.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2";
mm10-chrY	ENSEMBL	CDS	70271444	70272124	.	-	0	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000180179.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-201"; exon_number 1; exon_id "ENSMUSE00001090393.1"; level 3; protein_id "ENSMUSP00000137343.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2";
mm10-chrY	ENSEMBL	start_codon	70272122	70272124	.	-	0	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000180179.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-201"; exon_number 1; exon_id "ENSMUSE00001090393.1"; level 3; protein_id "ENSMUSP00000137343.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2";
mm10-chrY	ENSEMBL	stop_codon	70271441	70271443	.	-	0	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000180179.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-201"; exon_number 1; exon_id "ENSMUSE00001090393.1"; level 3; protein_id "ENSMUSP00000137343.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2";
mm10-chrY	ENSEMBL	UTR	70271441	70271443	.	-	.	gene_id "ENSMUSG00000094052.2"; transcript_id "ENSMUST00000180179.1"; gene_type "protein_coding"; gene_name "Gm21118"; transcript_type "protein_coding"; transcript_name "Gm21118-201"; exon_number 1; exon_id "ENSMUSE00001090393.1"; level 3; protein_id "ENSMUSP00000137343.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046000.2";
mm10-chrY	HAVANA	gene	70271306	70303343	.	-	.	gene_id "ENSMUSG00000099530.1"; gene_type "protein_coding"; gene_name "Gm29644"; level 2; tag "overlapping_locus"; havana_gene "OTTMUSG00000049469.1";
mm10-chrY	HAVANA	transcript	70271306	70303343	.	-	.	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	exon	70303152	70303343	.	-	.	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 1; exon_id "ENSMUSE00001328317.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	exon	70302741	70302927	.	-	.	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 2; exon_id "ENSMUSE00001318208.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	exon	70301090	70301817	.	-	.	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 3; exon_id "ENSMUSE00001330455.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	CDS	70301102	70301674	.	-	0	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 3; exon_id "ENSMUSE00001330455.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	start_codon	70301672	70301674	.	-	0	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 3; exon_id "ENSMUSE00001330455.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	stop_codon	70301099	70301101	.	-	0	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 3; exon_id "ENSMUSE00001330455.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	exon	70271306	70271539	.	-	.	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 4; exon_id "ENSMUSE00001335517.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	UTR	70303152	70303343	.	-	.	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 1; exon_id "ENSMUSE00001328317.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	UTR	70302741	70302927	.	-	.	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 2; exon_id "ENSMUSE00001318208.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	UTR	70301090	70301101	.	-	.	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 3; exon_id "ENSMUSE00001330455.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	UTR	70301675	70301817	.	-	.	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 3; exon_id "ENSMUSE00001330455.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	UTR	70271306	70271539	.	-	.	gene_id "ENSMUSG00000099530.1"; transcript_id "ENSMUST00000189003.1"; gene_type "protein_coding"; gene_name "Gm29644"; transcript_type "protein_coding"; transcript_name "Gm29644-201"; exon_number 4; exon_id "ENSMUSE00001335517.1"; level 2; protein_id "ENSMUSP00000139765.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "readthrough_transcript"; havana_gene "OTTMUSG00000049469.1"; havana_transcript "OTTMUST00000126109.1";
mm10-chrY	HAVANA	gene	70292585	70303287	.	-	.	gene_id "ENSMUSG00000101725.6"; gene_type "protein_coding"; gene_name "Gm29423"; level 2; tag "overlapping_locus"; havana_gene "OTTMUSG00000046001.3";
mm10-chrY	HAVANA	transcript	70292585	70303287	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189006.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-205"; level 2; protein_id "ENSMUSP00000140691.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_5"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120148.2";
mm10-chrY	HAVANA	exon	70303152	70303287	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189006.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-205"; exon_number 1; exon_id "ENSMUSE00001335639.1"; level 2; protein_id "ENSMUSP00000140691.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_5"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120148.2";
mm10-chrY	HAVANA	CDS	70303152	70303173	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189006.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-205"; exon_number 1; exon_id "ENSMUSE00001335639.1"; level 2; protein_id "ENSMUSP00000140691.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_5"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120148.2";
mm10-chrY	HAVANA	start_codon	70303171	70303173	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189006.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-205"; exon_number 1; exon_id "ENSMUSE00001335639.1"; level 2; protein_id "ENSMUSP00000140691.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_5"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120148.2";
mm10-chrY	HAVANA	exon	70293747	70293880	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189006.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-205"; exon_number 2; exon_id "ENSMUSE00001327215.1"; level 2; protein_id "ENSMUSP00000140691.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_5"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120148.2";
mm10-chrY	HAVANA	CDS	70293747	70293880	.	-	2	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189006.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-205"; exon_number 2; exon_id "ENSMUSE00001327215.1"; level 2; protein_id "ENSMUSP00000140691.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_5"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120148.2";
mm10-chrY	HAVANA	exon	70292585	70293452	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189006.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-205"; exon_number 3; exon_id "ENSMUSE00001330700.1"; level 2; protein_id "ENSMUSP00000140691.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_5"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120148.2";
mm10-chrY	HAVANA	CDS	70293444	70293452	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189006.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-205"; exon_number 3; exon_id "ENSMUSE00001330700.1"; level 2; protein_id "ENSMUSP00000140691.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_5"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120148.2";
mm10-chrY	HAVANA	stop_codon	70293441	70293443	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189006.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-205"; exon_number 3; exon_id "ENSMUSE00001330700.1"; level 2; protein_id "ENSMUSP00000140691.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_5"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120148.2";
mm10-chrY	HAVANA	UTR	70303174	70303287	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189006.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-205"; exon_number 1; exon_id "ENSMUSE00001335639.1"; level 2; protein_id "ENSMUSP00000140691.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_5"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120148.2";
mm10-chrY	HAVANA	UTR	70292585	70293443	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189006.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-205"; exon_number 3; exon_id "ENSMUSE00001330700.1"; level 2; protein_id "ENSMUSP00000140691.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_5"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120148.2";
mm10-chrY	HAVANA	transcript	70293280	70303287	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	exon	70303152	70303287	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 1; exon_id "ENSMUSE00001335639.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	CDS	70303152	70303173	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 1; exon_id "ENSMUSE00001335639.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	start_codon	70303171	70303173	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 1; exon_id "ENSMUSE00001335639.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	exon	70301140	70301270	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	CDS	70301146	70301270	.	-	2	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	stop_codon	70301143	70301145	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	exon	70300438	70300655	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 3; exon_id "ENSMUSE00001335757.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	exon	70299559	70299742	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 4; exon_id "ENSMUSE00001319509.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	exon	70293747	70293880	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 5; exon_id "ENSMUSE00001325304.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	exon	70293280	70293452	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 6; exon_id "ENSMUSE00001328421.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	UTR	70303174	70303287	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 1; exon_id "ENSMUSE00001335639.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	UTR	70301140	70301145	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	UTR	70300438	70300655	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 3; exon_id "ENSMUSE00001335757.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	UTR	70299559	70299742	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 4; exon_id "ENSMUSE00001319509.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	UTR	70293747	70293880	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 5; exon_id "ENSMUSE00001325304.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	UTR	70293280	70293452	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000190274.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-208"; exon_number 6; exon_id "ENSMUSE00001328421.1"; level 2; protein_id "ENSMUSP00000139984.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120149.2";
mm10-chrY	HAVANA	transcript	70298974	70303199	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185877.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "processed_transcript"; transcript_name "Gm29423-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120150.1";
mm10-chrY	HAVANA	exon	70303152	70303199	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185877.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "processed_transcript"; transcript_name "Gm29423-201"; exon_number 1; exon_id "ENSMUSE00001330195.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120150.1";
mm10-chrY	HAVANA	exon	70299559	70299742	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185877.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "processed_transcript"; transcript_name "Gm29423-201"; exon_number 2; exon_id "ENSMUSE00001319509.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120150.1";
mm10-chrY	HAVANA	exon	70298974	70299043	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185877.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "processed_transcript"; transcript_name "Gm29423-201"; exon_number 3; exon_id "ENSMUSE00001336049.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120150.1";
mm10-chrY	HAVANA	transcript	70298976	70303205	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	exon	70303152	70303205	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 1; exon_id "ENSMUSE00001330677.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	CDS	70303152	70303173	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 1; exon_id "ENSMUSE00001330677.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	start_codon	70303171	70303173	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 1; exon_id "ENSMUSE00001330677.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	exon	70301140	70301270	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	CDS	70301146	70301270	.	-	2	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	stop_codon	70301143	70301145	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	exon	70300438	70300655	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 3; exon_id "ENSMUSE00001335757.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	exon	70299559	70299742	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 4; exon_id "ENSMUSE00001319509.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	exon	70298976	70299043	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 5; exon_id "ENSMUSE00001333271.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	UTR	70303174	70303205	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 1; exon_id "ENSMUSE00001330677.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	UTR	70301140	70301145	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	UTR	70300438	70300655	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 3; exon_id "ENSMUSE00001335757.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	UTR	70299559	70299742	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 4; exon_id "ENSMUSE00001319509.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	UTR	70298976	70299043	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189304.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-206"; exon_number 5; exon_id "ENSMUSE00001333271.1"; level 2; protein_id "ENSMUSP00000139415.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120151.2";
mm10-chrY	HAVANA	transcript	70298999	70301237	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000187904.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-203"; level 2; protein_id "ENSMUSP00000140960.1"; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120152.2";
mm10-chrY	HAVANA	exon	70301140	70301237	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000187904.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-203"; exon_number 1; exon_id "ENSMUSE00001332310.1"; level 2; protein_id "ENSMUSP00000140960.1"; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120152.2";
mm10-chrY	HAVANA	CDS	70301146	70301237	.	-	2	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000187904.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-203"; exon_number 1; exon_id "ENSMUSE00001332310.1"; level 2; protein_id "ENSMUSP00000140960.1"; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120152.2";
mm10-chrY	HAVANA	stop_codon	70301143	70301145	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000187904.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-203"; exon_number 1; exon_id "ENSMUSE00001332310.1"; level 2; protein_id "ENSMUSP00000140960.1"; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120152.2";
mm10-chrY	HAVANA	exon	70299559	70299742	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000187904.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-203"; exon_number 2; exon_id "ENSMUSE00001319509.1"; level 2; protein_id "ENSMUSP00000140960.1"; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120152.2";
mm10-chrY	HAVANA	exon	70298999	70299043	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000187904.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-203"; exon_number 3; exon_id "ENSMUSE00001333576.1"; level 2; protein_id "ENSMUSP00000140960.1"; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120152.2";
mm10-chrY	HAVANA	UTR	70301140	70301145	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000187904.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-203"; exon_number 1; exon_id "ENSMUSE00001332310.1"; level 2; protein_id "ENSMUSP00000140960.1"; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120152.2";
mm10-chrY	HAVANA	UTR	70299559	70299742	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000187904.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-203"; exon_number 2; exon_id "ENSMUSE00001319509.1"; level 2; protein_id "ENSMUSP00000140960.1"; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120152.2";
mm10-chrY	HAVANA	UTR	70298999	70299043	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000187904.6"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-203"; exon_number 3; exon_id "ENSMUSE00001333576.1"; level 2; protein_id "ENSMUSP00000140960.1"; transcript_support_level "3"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120152.2";
mm10-chrY	HAVANA	transcript	70298999	70303230	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189580.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-207"; level 2; protein_id "ENSMUSP00000139436.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120153.2";
mm10-chrY	HAVANA	exon	70303152	70303230	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189580.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-207"; exon_number 1; exon_id "ENSMUSE00001324138.1"; level 2; protein_id "ENSMUSP00000139436.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120153.2";
mm10-chrY	HAVANA	CDS	70303152	70303173	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189580.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-207"; exon_number 1; exon_id "ENSMUSE00001324138.1"; level 2; protein_id "ENSMUSP00000139436.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120153.2";
mm10-chrY	HAVANA	start_codon	70303171	70303173	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189580.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-207"; exon_number 1; exon_id "ENSMUSE00001324138.1"; level 2; protein_id "ENSMUSP00000139436.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120153.2";
mm10-chrY	HAVANA	exon	70301140	70301270	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189580.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-207"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139436.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120153.2";
mm10-chrY	HAVANA	CDS	70301146	70301270	.	-	2	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189580.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-207"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139436.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120153.2";
mm10-chrY	HAVANA	stop_codon	70301143	70301145	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189580.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-207"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139436.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120153.2";
mm10-chrY	HAVANA	exon	70298999	70299043	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189580.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-207"; exon_number 3; exon_id "ENSMUSE00001333576.1"; level 2; protein_id "ENSMUSP00000139436.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120153.2";
mm10-chrY	HAVANA	UTR	70303174	70303230	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189580.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-207"; exon_number 1; exon_id "ENSMUSE00001324138.1"; level 2; protein_id "ENSMUSP00000139436.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120153.2";
mm10-chrY	HAVANA	UTR	70301140	70301145	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189580.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-207"; exon_number 2; exon_id "ENSMUSE00001330908.1"; level 2; protein_id "ENSMUSP00000139436.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120153.2";
mm10-chrY	HAVANA	UTR	70298999	70299043	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000189580.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-207"; exon_number 3; exon_id "ENSMUSE00001333576.1"; level 2; protein_id "ENSMUSP00000139436.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_alternative_2"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120153.2";
mm10-chrY	HAVANA	transcript	70299002	70303231	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	exon	70303152	70303231	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 1; exon_id "ENSMUSE00001327846.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	CDS	70303152	70303173	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 1; exon_id "ENSMUSE00001327846.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	start_codon	70303171	70303173	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 1; exon_id "ENSMUSE00001327846.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	exon	70301581	70301817	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 2; exon_id "ENSMUSE00001322422.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	CDS	70301705	70301817	.	-	2	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 2; exon_id "ENSMUSE00001322422.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	stop_codon	70301702	70301704	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 2; exon_id "ENSMUSE00001322422.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	exon	70299559	70299742	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 3; exon_id "ENSMUSE00001319509.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	exon	70299002	70299043	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 4; exon_id "ENSMUSE00001334298.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	UTR	70303174	70303231	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 1; exon_id "ENSMUSE00001327846.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	UTR	70301581	70301704	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 2; exon_id "ENSMUSE00001322422.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	UTR	70299559	70299742	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 3; exon_id "ENSMUSE00001319509.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	UTR	70299002	70299043	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000188222.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "nonsense_mediated_decay"; transcript_name "Gm29423-204"; exon_number 4; exon_id "ENSMUSE00001334298.1"; level 2; protein_id "ENSMUSP00000141061.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120156.3";
mm10-chrY	HAVANA	transcript	70299655	70301237	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185989.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-202"; level 2; protein_id "ENSMUSP00000141155.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120154.2";
mm10-chrY	HAVANA	exon	70301140	70301237	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185989.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-202"; exon_number 1; exon_id "ENSMUSE00001332310.1"; level 2; protein_id "ENSMUSP00000141155.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120154.2";
mm10-chrY	HAVANA	CDS	70301146	70301237	.	-	2	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185989.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-202"; exon_number 1; exon_id "ENSMUSE00001332310.1"; level 2; protein_id "ENSMUSP00000141155.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120154.2";
mm10-chrY	HAVANA	stop_codon	70301143	70301145	.	-	0	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185989.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-202"; exon_number 1; exon_id "ENSMUSE00001332310.1"; level 2; protein_id "ENSMUSP00000141155.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120154.2";
mm10-chrY	HAVANA	exon	70300438	70300480	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185989.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-202"; exon_number 2; exon_id "ENSMUSE00001330184.1"; level 2; protein_id "ENSMUSP00000141155.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120154.2";
mm10-chrY	HAVANA	exon	70299655	70299742	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185989.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-202"; exon_number 3; exon_id "ENSMUSE00001334483.1"; level 2; protein_id "ENSMUSP00000141155.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120154.2";
mm10-chrY	HAVANA	UTR	70301140	70301145	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185989.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-202"; exon_number 1; exon_id "ENSMUSE00001332310.1"; level 2; protein_id "ENSMUSP00000141155.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120154.2";
mm10-chrY	HAVANA	UTR	70300438	70300480	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185989.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-202"; exon_number 2; exon_id "ENSMUSE00001330184.1"; level 2; protein_id "ENSMUSP00000141155.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120154.2";
mm10-chrY	HAVANA	UTR	70299655	70299742	.	-	.	gene_id "ENSMUSG00000101725.6"; transcript_id "ENSMUST00000185989.1"; gene_type "protein_coding"; gene_name "Gm29423"; transcript_type "protein_coding"; transcript_name "Gm29423-202"; exon_number 3; exon_id "ENSMUSE00001334483.1"; level 2; protein_id "ENSMUSP00000141155.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTMUSG00000046001.3"; havana_transcript "OTTMUST00000120154.2";
mm10-chrY	HAVANA	gene	70337927	70338622	.	-	.	gene_id "ENSMUSG00000099948.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29424"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046003.1";
mm10-chrY	HAVANA	transcript	70337927	70338622	.	-	.	gene_id "ENSMUSG00000099948.1"; transcript_id "ENSMUST00000189716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29424"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29424-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046003.1"; havana_transcript "OTTMUST00000120157.1";
mm10-chrY	HAVANA	exon	70337927	70338622	.	-	.	gene_id "ENSMUSG00000099948.1"; transcript_id "ENSMUST00000189716.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29424"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29424-201"; exon_number 1; exon_id "ENSMUSE00001328196.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046003.1"; havana_transcript "OTTMUST00000120157.1";
mm10-chrY	HAVANA	gene	70367444	70370583	.	+	.	gene_id "ENSMUSG00000104442.1"; gene_type "TEC"; gene_name "4932431L22Rik"; level 2; havana_gene "OTTMUSG00000046252.1";
mm10-chrY	HAVANA	transcript	70367444	70370583	.	+	.	gene_id "ENSMUSG00000104442.1"; transcript_id "ENSMUST00000193456.1"; gene_type "TEC"; gene_name "4932431L22Rik"; transcript_type "TEC"; transcript_name "4932431L22Rik-201"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000046252.1"; havana_transcript "OTTMUST00000120591.1";
mm10-chrY	HAVANA	exon	70367444	70370583	.	+	.	gene_id "ENSMUSG00000104442.1"; transcript_id "ENSMUST00000193456.1"; gene_type "TEC"; gene_name "4932431L22Rik"; transcript_type "TEC"; transcript_name "4932431L22Rik-201"; exon_number 1; exon_id "ENSMUSE00001340489.1"; level 2; transcript_support_level "NA"; tag "basic"; havana_gene "OTTMUSG00000046252.1"; havana_transcript "OTTMUST00000120591.1";
mm10-chrY	HAVANA	gene	70379763	70383001	.	+	.	gene_id "ENSMUSG00000101440.1"; gene_type "lincRNA"; gene_name "Gm29425"; level 2; havana_gene "OTTMUSG00000046004.1";
mm10-chrY	HAVANA	transcript	70379763	70383001	.	+	.	gene_id "ENSMUSG00000101440.1"; transcript_id "ENSMUST00000189421.1"; gene_type "lincRNA"; gene_name "Gm29425"; transcript_type "lincRNA"; transcript_name "Gm29425-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046004.1"; havana_transcript "OTTMUST00000120158.1";
mm10-chrY	HAVANA	exon	70379763	70380402	.	+	.	gene_id "ENSMUSG00000101440.1"; transcript_id "ENSMUST00000189421.1"; gene_type "lincRNA"; gene_name "Gm29425"; transcript_type "lincRNA"; transcript_name "Gm29425-202"; exon_number 1; exon_id "ENSMUSE00001328195.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046004.1"; havana_transcript "OTTMUST00000120158.1";
mm10-chrY	HAVANA	exon	70380888	70381073	.	+	.	gene_id "ENSMUSG00000101440.1"; transcript_id "ENSMUST00000189421.1"; gene_type "lincRNA"; gene_name "Gm29425"; transcript_type "lincRNA"; transcript_name "Gm29425-202"; exon_number 2; exon_id "ENSMUSE00001326244.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046004.1"; havana_transcript "OTTMUST00000120158.1";
mm10-chrY	HAVANA	exon	70381802	70381985	.	+	.	gene_id "ENSMUSG00000101440.1"; transcript_id "ENSMUST00000189421.1"; gene_type "lincRNA"; gene_name "Gm29425"; transcript_type "lincRNA"; transcript_name "Gm29425-202"; exon_number 3; exon_id "ENSMUSE00001333648.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046004.1"; havana_transcript "OTTMUST00000120158.1";
mm10-chrY	HAVANA	exon	70382513	70383001	.	+	.	gene_id "ENSMUSG00000101440.1"; transcript_id "ENSMUST00000189421.1"; gene_type "lincRNA"; gene_name "Gm29425"; transcript_type "lincRNA"; transcript_name "Gm29425-202"; exon_number 4; exon_id "ENSMUSE00001322017.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046004.1"; havana_transcript "OTTMUST00000120158.1";
mm10-chrY	HAVANA	transcript	70380216	70382581	.	+	.	gene_id "ENSMUSG00000101440.1"; transcript_id "ENSMUST00000186959.1"; gene_type "lincRNA"; gene_name "Gm29425"; transcript_type "lincRNA"; transcript_name "Gm29425-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046004.1"; havana_transcript "OTTMUST00000120159.1";
mm10-chrY	HAVANA	exon	70380216	70380402	.	+	.	gene_id "ENSMUSG00000101440.1"; transcript_id "ENSMUST00000186959.1"; gene_type "lincRNA"; gene_name "Gm29425"; transcript_type "lincRNA"; transcript_name "Gm29425-201"; exon_number 1; exon_id "ENSMUSE00001326377.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046004.1"; havana_transcript "OTTMUST00000120159.1";
mm10-chrY	HAVANA	exon	70380892	70381073	.	+	.	gene_id "ENSMUSG00000101440.1"; transcript_id "ENSMUST00000186959.1"; gene_type "lincRNA"; gene_name "Gm29425"; transcript_type "lincRNA"; transcript_name "Gm29425-201"; exon_number 2; exon_id "ENSMUSE00001328166.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046004.1"; havana_transcript "OTTMUST00000120159.1";
mm10-chrY	HAVANA	exon	70382513	70382581	.	+	.	gene_id "ENSMUSG00000101440.1"; transcript_id "ENSMUST00000186959.1"; gene_type "lincRNA"; gene_name "Gm29425"; transcript_type "lincRNA"; transcript_name "Gm29425-201"; exon_number 3; exon_id "ENSMUSE00001331979.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046004.1"; havana_transcript "OTTMUST00000120159.1";
mm10-chrY	HAVANA	gene	70441882	70468158	.	+	.	gene_id "ENSMUSG00000094616.7"; gene_type "protein_coding"; gene_name "Gm20888"; level 2; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	HAVANA	transcript	70441882	70468158	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	exon	70441882	70441925	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 1; exon_id "ENSMUSE00001323555.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	exon	70443291	70443422	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 2; exon_id "ENSMUSE00001330412.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	CDS	70443305	70443422	.	+	0	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 2; exon_id "ENSMUSE00001330412.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	start_codon	70443305	70443307	.	+	0	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 2; exon_id "ENSMUSE00001330412.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	exon	70448756	70448822	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 3; exon_id "ENSMUSE00000981823.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	CDS	70448756	70448822	.	+	2	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 3; exon_id "ENSMUSE00000981823.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	exon	70449503	70449537	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 4; exon_id "ENSMUSE00001025042.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	CDS	70449503	70449537	.	+	1	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 4; exon_id "ENSMUSE00001025042.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	exon	70456582	70456648	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 5; exon_id "ENSMUSE00001321774.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	CDS	70456582	70456648	.	+	2	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 5; exon_id "ENSMUSE00001321774.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	exon	70457228	70457262	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 6; exon_id "ENSMUSE00001327883.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	CDS	70457228	70457262	.	+	1	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 6; exon_id "ENSMUSE00001327883.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	exon	70464449	70464566	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 7; exon_id "ENSMUSE00001092874.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	CDS	70464449	70464566	.	+	2	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 7; exon_id "ENSMUSE00001092874.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	exon	70465339	70465438	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 8; exon_id "ENSMUSE00000704950.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	CDS	70465339	70465438	.	+	1	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 8; exon_id "ENSMUSE00000704950.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	exon	70467479	70467577	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 9; exon_id "ENSMUSE00001002181.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	CDS	70467479	70467577	.	+	0	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 9; exon_id "ENSMUSE00001002181.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	exon	70467937	70468158	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 10; exon_id "ENSMUSE00001325256.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	CDS	70467937	70467963	.	+	0	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 10; exon_id "ENSMUSE00001325256.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	stop_codon	70467964	70467966	.	+	0	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 10; exon_id "ENSMUSE00001325256.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	UTR	70441882	70441925	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 1; exon_id "ENSMUSE00001323555.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	UTR	70443291	70443304	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 2; exon_id "ENSMUSE00001330412.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	HAVANA	UTR	70467964	70468158	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000186890.6"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-202"; exon_number 10; exon_id "ENSMUSE00001325256.1"; level 2; protein_id "ENSMUSP00000140067.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046010.1"; havana_transcript "OTTMUST00000120173.1";
mm10-chrY	ENSEMBL	transcript	70443305	70467966	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	exon	70443305	70443422	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 1; exon_id "ENSMUSE00001044500.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	CDS	70443305	70443422	.	+	0	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 1; exon_id "ENSMUSE00001044500.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	start_codon	70443305	70443307	.	+	0	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 1; exon_id "ENSMUSE00001044500.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	exon	70448756	70448822	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 2; exon_id "ENSMUSE00000981823.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	CDS	70448756	70448822	.	+	2	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 2; exon_id "ENSMUSE00000981823.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	exon	70449503	70449537	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 3; exon_id "ENSMUSE00001025042.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	CDS	70449503	70449537	.	+	1	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 3; exon_id "ENSMUSE00001025042.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	exon	70464449	70464566	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 4; exon_id "ENSMUSE00001092874.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	CDS	70464449	70464566	.	+	2	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 4; exon_id "ENSMUSE00001092874.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	exon	70465339	70465438	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 5; exon_id "ENSMUSE00000704950.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	CDS	70465339	70465438	.	+	1	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 5; exon_id "ENSMUSE00000704950.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	exon	70467479	70467577	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 6; exon_id "ENSMUSE00001002181.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	CDS	70467479	70467577	.	+	0	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 6; exon_id "ENSMUSE00001002181.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	exon	70467937	70467966	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 7; exon_id "ENSMUSE00001078276.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	CDS	70467937	70467963	.	+	0	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 7; exon_id "ENSMUSE00001078276.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	stop_codon	70467964	70467966	.	+	0	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 7; exon_id "ENSMUSE00001078276.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	ENSEMBL	UTR	70467964	70467966	.	+	.	gene_id "ENSMUSG00000094616.7"; transcript_id "ENSMUST00000178934.1"; gene_type "protein_coding"; gene_name "Gm20888"; transcript_type "protein_coding"; transcript_name "Gm20888-201"; exon_number 7; exon_id "ENSMUSE00001078276.1"; level 3; protein_id "ENSMUSP00000137536.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046010.1";
mm10-chrY	HAVANA	gene	70523216	70523822	.	-	.	gene_id "ENSMUSG00000100653.1"; gene_type "lincRNA"; gene_name "Gm28238"; level 2; havana_gene "OTTMUSG00000046028.1";
mm10-chrY	HAVANA	transcript	70523216	70523822	.	-	.	gene_id "ENSMUSG00000100653.1"; transcript_id "ENSMUST00000188102.1"; gene_type "lincRNA"; gene_name "Gm28238"; transcript_type "lincRNA"; transcript_name "Gm28238-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046028.1"; havana_transcript "OTTMUST00000120207.1";
mm10-chrY	HAVANA	exon	70523631	70523822	.	-	.	gene_id "ENSMUSG00000100653.1"; transcript_id "ENSMUST00000188102.1"; gene_type "lincRNA"; gene_name "Gm28238"; transcript_type "lincRNA"; transcript_name "Gm28238-201"; exon_number 1; exon_id "ENSMUSE00001335453.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046028.1"; havana_transcript "OTTMUST00000120207.1";
mm10-chrY	HAVANA	exon	70523216	70523406	.	-	.	gene_id "ENSMUSG00000100653.1"; transcript_id "ENSMUST00000188102.1"; gene_type "lincRNA"; gene_name "Gm28238"; transcript_type "lincRNA"; transcript_name "Gm28238-201"; exon_number 2; exon_id "ENSMUSE00001321206.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046028.1"; havana_transcript "OTTMUST00000120207.1";
mm10-chrY	HAVANA	gene	70558412	70558726	.	-	.	gene_id "ENSMUSG00000101421.1"; gene_type "processed_pseudogene"; gene_name "Gm28433"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046011.1";
mm10-chrY	HAVANA	transcript	70558412	70558726	.	-	.	gene_id "ENSMUSG00000101421.1"; transcript_id "ENSMUST00000187085.1"; gene_type "processed_pseudogene"; gene_name "Gm28433"; transcript_type "processed_pseudogene"; transcript_name "Gm28433-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046011.1"; havana_transcript "OTTMUST00000120174.1";
mm10-chrY	HAVANA	exon	70558412	70558726	.	-	.	gene_id "ENSMUSG00000101421.1"; transcript_id "ENSMUST00000187085.1"; gene_type "processed_pseudogene"; gene_name "Gm28433"; transcript_type "processed_pseudogene"; transcript_name "Gm28433-201"; exon_number 1; exon_id "ENSMUSE00001328402.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046011.1"; havana_transcript "OTTMUST00000120174.1";
mm10-chrY	HAVANA	gene	70560130	70563472	.	-	.	gene_id "ENSMUSG00000101706.1"; gene_type "lincRNA"; gene_name "Gm28431"; level 2; havana_gene "OTTMUSG00000046012.1";
mm10-chrY	HAVANA	transcript	70560130	70563472	.	-	.	gene_id "ENSMUSG00000101706.1"; transcript_id "ENSMUST00000185592.1"; gene_type "lincRNA"; gene_name "Gm28431"; transcript_type "lincRNA"; transcript_name "Gm28431-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046012.1"; havana_transcript "OTTMUST00000120175.1";
mm10-chrY	HAVANA	exon	70563250	70563472	.	-	.	gene_id "ENSMUSG00000101706.1"; transcript_id "ENSMUST00000185592.1"; gene_type "lincRNA"; gene_name "Gm28431"; transcript_type "lincRNA"; transcript_name "Gm28431-201"; exon_number 1; exon_id "ENSMUSE00001321094.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046012.1"; havana_transcript "OTTMUST00000120175.1";
mm10-chrY	HAVANA	exon	70560130	70562072	.	-	.	gene_id "ENSMUSG00000101706.1"; transcript_id "ENSMUST00000185592.1"; gene_type "lincRNA"; gene_name "Gm28431"; transcript_type "lincRNA"; transcript_name "Gm28431-201"; exon_number 2; exon_id "ENSMUSE00001334016.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046012.1"; havana_transcript "OTTMUST00000120175.1";
mm10-chrY	HAVANA	gene	70595458	70598696	.	+	.	gene_id "ENSMUSG00000101627.1"; gene_type "lincRNA"; gene_name "Gm28432"; level 2; havana_gene "OTTMUSG00000046013.1";
mm10-chrY	HAVANA	transcript	70595458	70598696	.	+	.	gene_id "ENSMUSG00000101627.1"; transcript_id "ENSMUST00000185237.1"; gene_type "lincRNA"; gene_name "Gm28432"; transcript_type "lincRNA"; transcript_name "Gm28432-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046013.1"; havana_transcript "OTTMUST00000120176.1";
mm10-chrY	HAVANA	exon	70595458	70596097	.	+	.	gene_id "ENSMUSG00000101627.1"; transcript_id "ENSMUST00000185237.1"; gene_type "lincRNA"; gene_name "Gm28432"; transcript_type "lincRNA"; transcript_name "Gm28432-201"; exon_number 1; exon_id "ENSMUSE00001335439.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046013.1"; havana_transcript "OTTMUST00000120176.1";
mm10-chrY	HAVANA	exon	70596583	70596768	.	+	.	gene_id "ENSMUSG00000101627.1"; transcript_id "ENSMUST00000185237.1"; gene_type "lincRNA"; gene_name "Gm28432"; transcript_type "lincRNA"; transcript_name "Gm28432-201"; exon_number 2; exon_id "ENSMUSE00001329100.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046013.1"; havana_transcript "OTTMUST00000120176.1";
mm10-chrY	HAVANA	exon	70597498	70597681	.	+	.	gene_id "ENSMUSG00000101627.1"; transcript_id "ENSMUST00000185237.1"; gene_type "lincRNA"; gene_name "Gm28432"; transcript_type "lincRNA"; transcript_name "Gm28432-201"; exon_number 3; exon_id "ENSMUSE00001332944.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046013.1"; havana_transcript "OTTMUST00000120176.1";
mm10-chrY	HAVANA	exon	70598208	70598696	.	+	.	gene_id "ENSMUSG00000101627.1"; transcript_id "ENSMUST00000185237.1"; gene_type "lincRNA"; gene_name "Gm28432"; transcript_type "lincRNA"; transcript_name "Gm28432-201"; exon_number 4; exon_id "ENSMUSE00001324801.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046013.1"; havana_transcript "OTTMUST00000120176.1";
mm10-chrY	HAVANA	transcript	70595911	70598276	.	+	.	gene_id "ENSMUSG00000101627.1"; transcript_id "ENSMUST00000189356.1"; gene_type "lincRNA"; gene_name "Gm28432"; transcript_type "lincRNA"; transcript_name "Gm28432-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046013.1"; havana_transcript "OTTMUST00000120177.1";
mm10-chrY	HAVANA	exon	70595911	70596097	.	+	.	gene_id "ENSMUSG00000101627.1"; transcript_id "ENSMUST00000189356.1"; gene_type "lincRNA"; gene_name "Gm28432"; transcript_type "lincRNA"; transcript_name "Gm28432-202"; exon_number 1; exon_id "ENSMUSE00001319298.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046013.1"; havana_transcript "OTTMUST00000120177.1";
mm10-chrY	HAVANA	exon	70596587	70596768	.	+	.	gene_id "ENSMUSG00000101627.1"; transcript_id "ENSMUST00000189356.1"; gene_type "lincRNA"; gene_name "Gm28432"; transcript_type "lincRNA"; transcript_name "Gm28432-202"; exon_number 2; exon_id "ENSMUSE00001335597.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046013.1"; havana_transcript "OTTMUST00000120177.1";
mm10-chrY	HAVANA	exon	70598208	70598276	.	+	.	gene_id "ENSMUSG00000101627.1"; transcript_id "ENSMUST00000189356.1"; gene_type "lincRNA"; gene_name "Gm28432"; transcript_type "lincRNA"; transcript_name "Gm28432-202"; exon_number 3; exon_id "ENSMUSE00001318627.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046013.1"; havana_transcript "OTTMUST00000120177.1";
mm10-chrY	HAVANA	gene	70706137	70706829	.	-	.	gene_id "ENSMUSG00000101852.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20886"; level 2; havana_gene "OTTMUSG00000046014.1";
mm10-chrY	HAVANA	transcript	70706137	70706829	.	-	.	gene_id "ENSMUSG00000101852.1"; transcript_id "ENSMUST00000187173.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20886"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20886-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046014.1"; havana_transcript "OTTMUST00000120178.1";
mm10-chrY	HAVANA	exon	70706137	70706829	.	-	.	gene_id "ENSMUSG00000101852.1"; transcript_id "ENSMUST00000187173.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20886"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20886-201"; exon_number 1; exon_id "ENSMUSE00001327894.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046014.1"; havana_transcript "OTTMUST00000120178.1";
mm10-chrY	HAVANA	gene	70780706	70781401	.	-	.	gene_id "ENSMUSG00000099438.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21808"; level 2; havana_gene "OTTMUSG00000046029.1";
mm10-chrY	HAVANA	transcript	70780706	70781401	.	-	.	gene_id "ENSMUSG00000099438.1"; transcript_id "ENSMUST00000185495.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21808"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21808-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046029.1"; havana_transcript "OTTMUST00000120208.1";
mm10-chrY	HAVANA	exon	70780706	70781401	.	-	.	gene_id "ENSMUSG00000099438.1"; transcript_id "ENSMUST00000185495.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21808"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21808-201"; exon_number 1; exon_id "ENSMUSE00001334675.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046029.1"; havana_transcript "OTTMUST00000120208.1";
mm10-chrY	HAVANA	gene	70802328	70812605	.	-	.	gene_id "ENSMUSG00000101786.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046030.1";
mm10-chrY	HAVANA	transcript	70802328	70812605	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191514.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-208"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120209.1";
mm10-chrY	HAVANA	exon	70812469	70812605	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191514.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-208"; exon_number 1; exon_id "ENSMUSE00001319217.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120209.1";
mm10-chrY	HAVANA	exon	70803090	70803223	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191514.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-208"; exon_number 2; exon_id "ENSMUSE00001332162.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120209.1";
mm10-chrY	HAVANA	exon	70802328	70802794	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191514.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-208"; exon_number 3; exon_id "ENSMUSE00001335274.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120209.1";
mm10-chrY	HAVANA	transcript	70802624	70812605	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000187128.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-203"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120210.1";
mm10-chrY	HAVANA	exon	70812469	70812605	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000187128.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-203"; exon_number 1; exon_id "ENSMUSE00001319217.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120210.1";
mm10-chrY	HAVANA	exon	70810470	70810600	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000187128.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-203"; exon_number 2; exon_id "ENSMUSE00001322386.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120210.1";
mm10-chrY	HAVANA	exon	70809768	70809985	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000187128.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-203"; exon_number 3; exon_id "ENSMUSE00001328099.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120210.1";
mm10-chrY	HAVANA	exon	70808889	70809072	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000187128.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-203"; exon_number 4; exon_id "ENSMUSE00001321914.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120210.1";
mm10-chrY	HAVANA	exon	70803090	70803223	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000187128.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-203"; exon_number 5; exon_id "ENSMUSE00001332162.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120210.1";
mm10-chrY	HAVANA	exon	70802624	70802794	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000187128.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-203"; exon_number 6; exon_id "ENSMUSE00001325336.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120210.1";
mm10-chrY	HAVANA	transcript	70808304	70812518	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000185850.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120211.1";
mm10-chrY	HAVANA	exon	70812469	70812518	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000185850.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-201"; exon_number 1; exon_id "ENSMUSE00001334917.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120211.1";
mm10-chrY	HAVANA	exon	70808304	70808373	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000185850.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-201"; exon_number 2; exon_id "ENSMUSE00001328658.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120211.1";
mm10-chrY	HAVANA	transcript	70808306	70812522	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191595.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-209"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120212.1";
mm10-chrY	HAVANA	exon	70812469	70812522	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191595.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-209"; exon_number 1; exon_id "ENSMUSE00001321975.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120212.1";
mm10-chrY	HAVANA	exon	70810470	70810600	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191595.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-209"; exon_number 2; exon_id "ENSMUSE00001322386.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120212.1";
mm10-chrY	HAVANA	exon	70809768	70809985	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191595.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-209"; exon_number 3; exon_id "ENSMUSE00001328099.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120212.1";
mm10-chrY	HAVANA	exon	70808889	70809072	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191595.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-209"; exon_number 4; exon_id "ENSMUSE00001321914.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120212.1";
mm10-chrY	HAVANA	exon	70808306	70808373	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191595.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-209"; exon_number 5; exon_id "ENSMUSE00001331071.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120212.1";
mm10-chrY	HAVANA	transcript	70808329	70810567	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191421.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-207"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120213.1";
mm10-chrY	HAVANA	exon	70810470	70810567	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191421.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-207"; exon_number 1; exon_id "ENSMUSE00001321564.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120213.1";
mm10-chrY	HAVANA	exon	70808889	70809072	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191421.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-207"; exon_number 2; exon_id "ENSMUSE00001321914.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120213.1";
mm10-chrY	HAVANA	exon	70808329	70808373	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000191421.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-207"; exon_number 3; exon_id "ENSMUSE00001335730.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120213.1";
mm10-chrY	HAVANA	transcript	70808329	70812548	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000190021.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120214.1";
mm10-chrY	HAVANA	exon	70812469	70812548	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000190021.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-206"; exon_number 1; exon_id "ENSMUSE00001326309.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120214.1";
mm10-chrY	HAVANA	exon	70810470	70810600	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000190021.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-206"; exon_number 2; exon_id "ENSMUSE00001322386.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120214.1";
mm10-chrY	HAVANA	exon	70808329	70808373	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000190021.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-206"; exon_number 3; exon_id "ENSMUSE00001335730.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120214.1";
mm10-chrY	HAVANA	transcript	70808332	70812548	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000189110.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-204"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120215.1";
mm10-chrY	HAVANA	exon	70812469	70812548	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000189110.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-204"; exon_number 1; exon_id "ENSMUSE00001326309.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120215.1";
mm10-chrY	HAVANA	exon	70810911	70811147	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000189110.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-204"; exon_number 2; exon_id "ENSMUSE00001331191.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120215.1";
mm10-chrY	HAVANA	exon	70808889	70809072	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000189110.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-204"; exon_number 3; exon_id "ENSMUSE00001321914.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120215.1";
mm10-chrY	HAVANA	exon	70808332	70808373	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000189110.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-204"; exon_number 4; exon_id "ENSMUSE00001330827.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120215.1";
mm10-chrY	HAVANA	transcript	70808985	70810567	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000186884.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-202"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120216.1";
mm10-chrY	HAVANA	exon	70810470	70810567	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000186884.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-202"; exon_number 1; exon_id "ENSMUSE00001321564.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120216.1";
mm10-chrY	HAVANA	exon	70809768	70809810	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000186884.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-202"; exon_number 2; exon_id "ENSMUSE00001330016.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120216.1";
mm10-chrY	HAVANA	exon	70808985	70809072	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000186884.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "processed_transcript"; transcript_name "Gm28840-202"; exon_number 3; exon_id "ENSMUSE00001325590.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120216.1";
mm10-chrY	HAVANA	transcript	70810390	70811004	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000189320.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28840-205"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120217.1";
mm10-chrY	HAVANA	exon	70810390	70811004	.	-	.	gene_id "ENSMUSG00000101786.6"; transcript_id "ENSMUST00000189320.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28840"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28840-205"; exon_number 1; exon_id "ENSMUSE00001321062.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046030.1"; havana_transcript "OTTMUST00000120217.1";
mm10-chrY	HAVANA	gene	70847257	70847951	.	-	.	gene_id "ENSMUSG00000099806.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28841"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046031.1";
mm10-chrY	HAVANA	transcript	70847257	70847951	.	-	.	gene_id "ENSMUSG00000099806.1"; transcript_id "ENSMUST00000191284.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28841"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28841-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046031.1"; havana_transcript "OTTMUST00000120218.1";
mm10-chrY	HAVANA	exon	70847257	70847951	.	-	.	gene_id "ENSMUSG00000099806.1"; transcript_id "ENSMUST00000191284.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28841"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28841-201"; exon_number 1; exon_id "ENSMUSE00001331520.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046031.1"; havana_transcript "OTTMUST00000120218.1";
mm10-chrY	HAVANA	gene	70890698	70893937	.	+	.	gene_id "ENSMUSG00000099704.1"; gene_type "lincRNA"; gene_name "Gm28842"; level 2; havana_gene "OTTMUSG00000046032.1";
mm10-chrY	HAVANA	transcript	70890698	70893937	.	+	.	gene_id "ENSMUSG00000099704.1"; transcript_id "ENSMUST00000190289.1"; gene_type "lincRNA"; gene_name "Gm28842"; transcript_type "lincRNA"; transcript_name "Gm28842-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046032.1"; havana_transcript "OTTMUST00000120219.1";
mm10-chrY	HAVANA	exon	70890698	70891337	.	+	.	gene_id "ENSMUSG00000099704.1"; transcript_id "ENSMUST00000190289.1"; gene_type "lincRNA"; gene_name "Gm28842"; transcript_type "lincRNA"; transcript_name "Gm28842-202"; exon_number 1; exon_id "ENSMUSE00001319261.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046032.1"; havana_transcript "OTTMUST00000120219.1";
mm10-chrY	HAVANA	exon	70891823	70892008	.	+	.	gene_id "ENSMUSG00000099704.1"; transcript_id "ENSMUST00000190289.1"; gene_type "lincRNA"; gene_name "Gm28842"; transcript_type "lincRNA"; transcript_name "Gm28842-202"; exon_number 2; exon_id "ENSMUSE00001325956.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046032.1"; havana_transcript "OTTMUST00000120219.1";
mm10-chrY	HAVANA	exon	70892739	70892922	.	+	.	gene_id "ENSMUSG00000099704.1"; transcript_id "ENSMUST00000190289.1"; gene_type "lincRNA"; gene_name "Gm28842"; transcript_type "lincRNA"; transcript_name "Gm28842-202"; exon_number 3; exon_id "ENSMUSE00001326376.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046032.1"; havana_transcript "OTTMUST00000120219.1";
mm10-chrY	HAVANA	exon	70893449	70893937	.	+	.	gene_id "ENSMUSG00000099704.1"; transcript_id "ENSMUST00000190289.1"; gene_type "lincRNA"; gene_name "Gm28842"; transcript_type "lincRNA"; transcript_name "Gm28842-202"; exon_number 4; exon_id "ENSMUSE00001323877.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046032.1"; havana_transcript "OTTMUST00000120219.1";
mm10-chrY	HAVANA	transcript	70891151	70893517	.	+	.	gene_id "ENSMUSG00000099704.1"; transcript_id "ENSMUST00000186399.1"; gene_type "lincRNA"; gene_name "Gm28842"; transcript_type "lincRNA"; transcript_name "Gm28842-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046032.1"; havana_transcript "OTTMUST00000120220.1";
mm10-chrY	HAVANA	exon	70891151	70891337	.	+	.	gene_id "ENSMUSG00000099704.1"; transcript_id "ENSMUST00000186399.1"; gene_type "lincRNA"; gene_name "Gm28842"; transcript_type "lincRNA"; transcript_name "Gm28842-201"; exon_number 1; exon_id "ENSMUSE00001331675.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046032.1"; havana_transcript "OTTMUST00000120220.1";
mm10-chrY	HAVANA	exon	70891827	70892008	.	+	.	gene_id "ENSMUSG00000099704.1"; transcript_id "ENSMUST00000186399.1"; gene_type "lincRNA"; gene_name "Gm28842"; transcript_type "lincRNA"; transcript_name "Gm28842-201"; exon_number 2; exon_id "ENSMUSE00001333592.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046032.1"; havana_transcript "OTTMUST00000120220.1";
mm10-chrY	HAVANA	exon	70893449	70893517	.	+	.	gene_id "ENSMUSG00000099704.1"; transcript_id "ENSMUST00000186399.1"; gene_type "lincRNA"; gene_name "Gm28842"; transcript_type "lincRNA"; transcript_name "Gm28842-201"; exon_number 3; exon_id "ENSMUSE00001326142.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046032.1"; havana_transcript "OTTMUST00000120220.1";
mm10-chrY	HAVANA	gene	70959371	70984031	.	+	.	gene_id "ENSMUSG00000101383.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28843"; level 2; havana_gene "OTTMUSG00000046033.1";
mm10-chrY	HAVANA	transcript	70959371	70984031	.	+	.	gene_id "ENSMUSG00000101383.1"; transcript_id "ENSMUST00000189198.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28843-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046033.1"; havana_transcript "OTTMUST00000120221.1";
mm10-chrY	HAVANA	exon	70959371	70959502	.	+	.	gene_id "ENSMUSG00000101383.1"; transcript_id "ENSMUST00000189198.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28843-201"; exon_number 1; exon_id "ENSMUSE00001323674.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046033.1"; havana_transcript "OTTMUST00000120221.1";
mm10-chrY	HAVANA	exon	70964840	70964906	.	+	.	gene_id "ENSMUSG00000101383.1"; transcript_id "ENSMUST00000189198.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28843-201"; exon_number 2; exon_id "ENSMUSE00001329261.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046033.1"; havana_transcript "OTTMUST00000120221.1";
mm10-chrY	HAVANA	exon	70965559	70965593	.	+	.	gene_id "ENSMUSG00000101383.1"; transcript_id "ENSMUST00000189198.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28843-201"; exon_number 3; exon_id "ENSMUSE00001318864.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046033.1"; havana_transcript "OTTMUST00000120221.1";
mm10-chrY	HAVANA	exon	70972637	70972703	.	+	.	gene_id "ENSMUSG00000101383.1"; transcript_id "ENSMUST00000189198.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28843-201"; exon_number 4; exon_id "ENSMUSE00001330055.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046033.1"; havana_transcript "OTTMUST00000120221.1";
mm10-chrY	HAVANA	exon	70973302	70973336	.	+	.	gene_id "ENSMUSG00000101383.1"; transcript_id "ENSMUST00000189198.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28843-201"; exon_number 5; exon_id "ENSMUSE00001322758.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046033.1"; havana_transcript "OTTMUST00000120221.1";
mm10-chrY	HAVANA	exon	70980511	70980628	.	+	.	gene_id "ENSMUSG00000101383.1"; transcript_id "ENSMUST00000189198.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28843-201"; exon_number 6; exon_id "ENSMUSE00001323379.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046033.1"; havana_transcript "OTTMUST00000120221.1";
mm10-chrY	HAVANA	exon	70981400	70981499	.	+	.	gene_id "ENSMUSG00000101383.1"; transcript_id "ENSMUST00000189198.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28843-201"; exon_number 7; exon_id "ENSMUSE00001323914.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046033.1"; havana_transcript "OTTMUST00000120221.1";
mm10-chrY	HAVANA	exon	70983549	70983647	.	+	.	gene_id "ENSMUSG00000101383.1"; transcript_id "ENSMUST00000189198.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28843-201"; exon_number 8; exon_id "ENSMUSE00001319578.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046033.1"; havana_transcript "OTTMUST00000120221.1";
mm10-chrY	HAVANA	exon	70984007	70984031	.	+	.	gene_id "ENSMUSG00000101383.1"; transcript_id "ENSMUST00000189198.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28843"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28843-201"; exon_number 9; exon_id "ENSMUSE00001319922.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046033.1"; havana_transcript "OTTMUST00000120221.1";
mm10-chrY	HAVANA	gene	71044486	71045181	.	-	.	gene_id "ENSMUSG00000099914.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28837"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046034.1";
mm10-chrY	HAVANA	transcript	71044486	71045181	.	-	.	gene_id "ENSMUSG00000099914.1"; transcript_id "ENSMUST00000190397.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28837"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28837-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046034.1"; havana_transcript "OTTMUST00000120222.1";
mm10-chrY	HAVANA	exon	71044486	71045181	.	-	.	gene_id "ENSMUSG00000099914.1"; transcript_id "ENSMUST00000190397.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28837"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28837-201"; exon_number 1; exon_id "ENSMUSE00001321821.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046034.1"; havana_transcript "OTTMUST00000120222.1";
mm10-chrY	HAVANA	gene	71081471	71081785	.	-	.	gene_id "ENSMUSG00000099369.1"; gene_type "processed_pseudogene"; gene_name "Gm28838"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046035.1";
mm10-chrY	HAVANA	transcript	71081471	71081785	.	-	.	gene_id "ENSMUSG00000099369.1"; transcript_id "ENSMUST00000186338.1"; gene_type "processed_pseudogene"; gene_name "Gm28838"; transcript_type "processed_pseudogene"; transcript_name "Gm28838-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046035.1"; havana_transcript "OTTMUST00000120223.1";
mm10-chrY	HAVANA	exon	71081471	71081785	.	-	.	gene_id "ENSMUSG00000099369.1"; transcript_id "ENSMUST00000186338.1"; gene_type "processed_pseudogene"; gene_name "Gm28838"; transcript_type "processed_pseudogene"; transcript_name "Gm28838-201"; exon_number 1; exon_id "ENSMUSE00001319697.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046035.1"; havana_transcript "OTTMUST00000120223.1";
mm10-chrY	HAVANA	gene	71083196	71086543	.	-	.	gene_id "ENSMUSG00000101893.1"; gene_type "lincRNA"; gene_name "Gm28839"; level 2; havana_gene "OTTMUSG00000046036.1";
mm10-chrY	HAVANA	transcript	71083196	71086543	.	-	.	gene_id "ENSMUSG00000101893.1"; transcript_id "ENSMUST00000189579.1"; gene_type "lincRNA"; gene_name "Gm28839"; transcript_type "lincRNA"; transcript_name "Gm28839-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046036.1"; havana_transcript "OTTMUST00000120224.1";
mm10-chrY	HAVANA	exon	71086321	71086543	.	-	.	gene_id "ENSMUSG00000101893.1"; transcript_id "ENSMUST00000189579.1"; gene_type "lincRNA"; gene_name "Gm28839"; transcript_type "lincRNA"; transcript_name "Gm28839-201"; exon_number 1; exon_id "ENSMUSE00001319883.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046036.1"; havana_transcript "OTTMUST00000120224.1";
mm10-chrY	HAVANA	exon	71083196	71085143	.	-	.	gene_id "ENSMUSG00000101893.1"; transcript_id "ENSMUST00000189579.1"; gene_type "lincRNA"; gene_name "Gm28839"; transcript_type "lincRNA"; transcript_name "Gm28839-201"; exon_number 2; exon_id "ENSMUSE00001318963.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046036.1"; havana_transcript "OTTMUST00000120224.1";
mm10-chrY	HAVANA	gene	71223310	71224005	.	-	.	gene_id "ENSMUSG00000100442.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20866"; level 2; havana_gene "OTTMUSG00000046037.1";
mm10-chrY	HAVANA	transcript	71223310	71224005	.	-	.	gene_id "ENSMUSG00000100442.1"; transcript_id "ENSMUST00000187981.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20866-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046037.1"; havana_transcript "OTTMUST00000120225.1";
mm10-chrY	HAVANA	exon	71223310	71224005	.	-	.	gene_id "ENSMUSG00000100442.1"; transcript_id "ENSMUST00000187981.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20866"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20866-201"; exon_number 1; exon_id "ENSMUSE00001326112.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046037.1"; havana_transcript "OTTMUST00000120225.1";
mm10-chrY	HAVANA	gene	71297957	71298649	.	-	.	gene_id "ENSMUSG00000101518.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20868"; level 2; havana_gene "OTTMUSG00000046038.1";
mm10-chrY	HAVANA	transcript	71297957	71298649	.	-	.	gene_id "ENSMUSG00000101518.1"; transcript_id "ENSMUST00000190110.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20868"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20868-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046038.1"; havana_transcript "OTTMUST00000120226.1";
mm10-chrY	HAVANA	exon	71297957	71298649	.	-	.	gene_id "ENSMUSG00000101518.1"; transcript_id "ENSMUST00000190110.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20868"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20868-201"; exon_number 1; exon_id "ENSMUSE00001318559.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046038.1"; havana_transcript "OTTMUST00000120226.1";
mm10-chrY	HAVANA	gene	71319469	71329800	.	-	.	gene_id "ENSMUSG00000101374.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046039.2";
mm10-chrY	HAVANA	transcript	71319469	71329800	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189297.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120248.1";
mm10-chrY	HAVANA	exon	71329665	71329800	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189297.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-206"; exon_number 1; exon_id "ENSMUSE00001319925.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120248.1";
mm10-chrY	HAVANA	exon	71320308	71320441	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189297.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-206"; exon_number 2; exon_id "ENSMUSE00001334499.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120248.1";
mm10-chrY	HAVANA	exon	71319469	71320013	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189297.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-206"; exon_number 3; exon_id "ENSMUSE00001323493.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120248.1";
mm10-chrY	HAVANA	transcript	71325519	71329712	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189411.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-207"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120227.1";
mm10-chrY	HAVANA	exon	71329665	71329712	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189411.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-207"; exon_number 1; exon_id "ENSMUSE00001332539.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120227.1";
mm10-chrY	HAVANA	exon	71326104	71326287	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189411.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-207"; exon_number 2; exon_id "ENSMUSE00001326246.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120227.1";
mm10-chrY	HAVANA	exon	71325519	71325588	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189411.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-207"; exon_number 3; exon_id "ENSMUSE00001335202.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120227.1";
mm10-chrY	HAVANA	transcript	71325519	71329714	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000186680.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-201"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120228.1";
mm10-chrY	HAVANA	exon	71329665	71329714	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000186680.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-201"; exon_number 1; exon_id "ENSMUSE00001334807.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120228.1";
mm10-chrY	HAVANA	exon	71325519	71325588	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000186680.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-201"; exon_number 2; exon_id "ENSMUSE00001335202.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120228.1";
mm10-chrY	HAVANA	transcript	71325519	71329716	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000188806.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-204"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120229.1";
mm10-chrY	HAVANA	exon	71329665	71329716	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000188806.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-204"; exon_number 1; exon_id "ENSMUSE00001319832.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120229.1";
mm10-chrY	HAVANA	exon	71328126	71328362	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000188806.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-204"; exon_number 2; exon_id "ENSMUSE00001318890.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120229.1";
mm10-chrY	HAVANA	exon	71326104	71326287	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000188806.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-204"; exon_number 3; exon_id "ENSMUSE00001326246.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120229.1";
mm10-chrY	HAVANA	exon	71325519	71325588	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000188806.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-204"; exon_number 4; exon_id "ENSMUSE00001335202.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120229.1";
mm10-chrY	HAVANA	transcript	71325521	71329718	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189667.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-208"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120230.1";
mm10-chrY	HAVANA	exon	71329665	71329718	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189667.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-208"; exon_number 1; exon_id "ENSMUSE00001329134.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120230.1";
mm10-chrY	HAVANA	exon	71327685	71327815	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189667.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-208"; exon_number 2; exon_id "ENSMUSE00001324929.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120230.1";
mm10-chrY	HAVANA	exon	71326983	71327200	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189667.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-208"; exon_number 3; exon_id "ENSMUSE00001320768.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120230.1";
mm10-chrY	HAVANA	exon	71326104	71326287	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189667.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-208"; exon_number 4; exon_id "ENSMUSE00001326246.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120230.1";
mm10-chrY	HAVANA	exon	71325521	71325588	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189667.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-208"; exon_number 5; exon_id "ENSMUSE00001335658.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120230.1";
mm10-chrY	HAVANA	transcript	71325544	71327782	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000188713.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-203"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120231.1";
mm10-chrY	HAVANA	exon	71327685	71327782	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000188713.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-203"; exon_number 1; exon_id "ENSMUSE00001322712.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120231.1";
mm10-chrY	HAVANA	exon	71326104	71326287	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000188713.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-203"; exon_number 2; exon_id "ENSMUSE00001326246.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120231.1";
mm10-chrY	HAVANA	exon	71325544	71325588	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000188713.6"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-203"; exon_number 3; exon_id "ENSMUSE00001334914.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120231.1";
mm10-chrY	HAVANA	transcript	71325544	71329743	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189142.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-205"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120232.1";
mm10-chrY	HAVANA	exon	71329665	71329743	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189142.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-205"; exon_number 1; exon_id "ENSMUSE00001330047.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120232.1";
mm10-chrY	HAVANA	exon	71327685	71327815	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189142.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-205"; exon_number 2; exon_id "ENSMUSE00001324929.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120232.1";
mm10-chrY	HAVANA	exon	71325544	71325588	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000189142.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-205"; exon_number 3; exon_id "ENSMUSE00001334914.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120232.1";
mm10-chrY	HAVANA	transcript	71326200	71327782	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000190172.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-209"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120233.1";
mm10-chrY	HAVANA	exon	71327685	71327782	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000190172.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-209"; exon_number 1; exon_id "ENSMUSE00001322712.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120233.1";
mm10-chrY	HAVANA	exon	71326983	71327025	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000190172.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-209"; exon_number 2; exon_id "ENSMUSE00001330722.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120233.1";
mm10-chrY	HAVANA	exon	71326200	71326287	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000190172.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "processed_transcript"; transcript_name "Gm28844-209"; exon_number 3; exon_id "ENSMUSE00001326043.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120233.1";
mm10-chrY	HAVANA	transcript	71327605	71328219	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000187977.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "transcribed_processed_pseudogene"; transcript_name "Gm28844-202"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120234.1";
mm10-chrY	HAVANA	exon	71327605	71328219	.	-	.	gene_id "ENSMUSG00000101374.6"; transcript_id "ENSMUST00000187977.1"; gene_type "transcribed_processed_pseudogene"; gene_name "Gm28844"; transcript_type "transcribed_processed_pseudogene"; transcript_name "Gm28844-202"; exon_number 1; exon_id "ENSMUSE00001333915.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046039.2"; havana_transcript "OTTMUST00000120234.1";
mm10-chrY	HAVANA	gene	71364314	71365009	.	-	.	gene_id "ENSMUSG00000101255.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21841"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046046.1";
mm10-chrY	HAVANA	transcript	71364314	71365009	.	-	.	gene_id "ENSMUSG00000101255.1"; transcript_id "ENSMUST00000189958.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21841"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21841-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046046.1"; havana_transcript "OTTMUST00000120249.1";
mm10-chrY	HAVANA	exon	71364314	71365009	.	-	.	gene_id "ENSMUSG00000101255.1"; transcript_id "ENSMUST00000189958.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21841"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21841-201"; exon_number 1; exon_id "ENSMUSE00001332363.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046046.1"; havana_transcript "OTTMUST00000120249.1";
mm10-chrY	HAVANA	gene	71407250	71410489	.	+	.	gene_id "ENSMUSG00000101713.1"; gene_type "lincRNA"; gene_name "Gm28668"; level 2; havana_gene "OTTMUSG00000046049.1";
mm10-chrY	HAVANA	transcript	71407250	71410489	.	+	.	gene_id "ENSMUSG00000101713.1"; transcript_id "ENSMUST00000186549.1"; gene_type "lincRNA"; gene_name "Gm28668"; transcript_type "lincRNA"; transcript_name "Gm28668-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046049.1"; havana_transcript "OTTMUST00000120252.1";
mm10-chrY	HAVANA	exon	71407250	71407889	.	+	.	gene_id "ENSMUSG00000101713.1"; transcript_id "ENSMUST00000186549.1"; gene_type "lincRNA"; gene_name "Gm28668"; transcript_type "lincRNA"; transcript_name "Gm28668-202"; exon_number 1; exon_id "ENSMUSE00001334787.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046049.1"; havana_transcript "OTTMUST00000120252.1";
mm10-chrY	HAVANA	exon	71408375	71408560	.	+	.	gene_id "ENSMUSG00000101713.1"; transcript_id "ENSMUST00000186549.1"; gene_type "lincRNA"; gene_name "Gm28668"; transcript_type "lincRNA"; transcript_name "Gm28668-202"; exon_number 2; exon_id "ENSMUSE00001328691.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046049.1"; havana_transcript "OTTMUST00000120252.1";
mm10-chrY	HAVANA	exon	71409290	71409473	.	+	.	gene_id "ENSMUSG00000101713.1"; transcript_id "ENSMUST00000186549.1"; gene_type "lincRNA"; gene_name "Gm28668"; transcript_type "lincRNA"; transcript_name "Gm28668-202"; exon_number 3; exon_id "ENSMUSE00001325714.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046049.1"; havana_transcript "OTTMUST00000120252.1";
mm10-chrY	HAVANA	exon	71410001	71410489	.	+	.	gene_id "ENSMUSG00000101713.1"; transcript_id "ENSMUST00000186549.1"; gene_type "lincRNA"; gene_name "Gm28668"; transcript_type "lincRNA"; transcript_name "Gm28668-202"; exon_number 4; exon_id "ENSMUSE00001323473.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046049.1"; havana_transcript "OTTMUST00000120252.1";
mm10-chrY	HAVANA	transcript	71407703	71410065	.	+	.	gene_id "ENSMUSG00000101713.1"; transcript_id "ENSMUST00000185428.1"; gene_type "lincRNA"; gene_name "Gm28668"; transcript_type "lincRNA"; transcript_name "Gm28668-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046049.1"; havana_transcript "OTTMUST00000120253.1";
mm10-chrY	HAVANA	exon	71407703	71407889	.	+	.	gene_id "ENSMUSG00000101713.1"; transcript_id "ENSMUST00000185428.1"; gene_type "lincRNA"; gene_name "Gm28668"; transcript_type "lincRNA"; transcript_name "Gm28668-201"; exon_number 1; exon_id "ENSMUSE00001322170.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046049.1"; havana_transcript "OTTMUST00000120253.1";
mm10-chrY	HAVANA	exon	71408379	71408560	.	+	.	gene_id "ENSMUSG00000101713.1"; transcript_id "ENSMUST00000185428.1"; gene_type "lincRNA"; gene_name "Gm28668"; transcript_type "lincRNA"; transcript_name "Gm28668-201"; exon_number 2; exon_id "ENSMUSE00001330452.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046049.1"; havana_transcript "OTTMUST00000120253.1";
mm10-chrY	HAVANA	exon	71410001	71410065	.	+	.	gene_id "ENSMUSG00000101713.1"; transcript_id "ENSMUST00000185428.1"; gene_type "lincRNA"; gene_name "Gm28668"; transcript_type "lincRNA"; transcript_name "Gm28668-201"; exon_number 3; exon_id "ENSMUSE00001328986.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046049.1"; havana_transcript "OTTMUST00000120253.1";
mm10-chrY	HAVANA	gene	71469449	71495632	.	+	.	gene_id "ENSMUSG00000099531.1"; gene_type "protein_coding"; gene_name "Gm20869"; level 2; havana_gene "OTTMUSG00000046091.1";
mm10-chrY	HAVANA	transcript	71469449	71495632	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	exon	71469449	71469492	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 1; exon_id "ENSMUSE00001320125.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	exon	71470862	71470993	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 2; exon_id "ENSMUSE00001331009.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	CDS	71470876	71470993	.	+	0	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 2; exon_id "ENSMUSE00001331009.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	start_codon	71470876	71470878	.	+	0	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 2; exon_id "ENSMUSE00001331009.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	exon	71476322	71476388	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 3; exon_id "ENSMUSE00001323604.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	CDS	71476322	71476388	.	+	2	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 3; exon_id "ENSMUSE00001323604.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	exon	71477036	71477070	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 4; exon_id "ENSMUSE00001330650.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	CDS	71477036	71477070	.	+	1	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 4; exon_id "ENSMUSE00001330650.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	exon	71484062	71484128	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 5; exon_id "ENSMUSE00001333250.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	CDS	71484062	71484128	.	+	2	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 5; exon_id "ENSMUSE00001333250.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	exon	71484704	71484738	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 6; exon_id "ENSMUSE00001320991.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	CDS	71484704	71484738	.	+	1	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 6; exon_id "ENSMUSE00001320991.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	exon	71491886	71492003	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 7; exon_id "ENSMUSE00001320375.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	CDS	71491886	71492003	.	+	2	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 7; exon_id "ENSMUSE00001320375.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	exon	71492809	71492908	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 8; exon_id "ENSMUSE00001319734.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	CDS	71492809	71492908	.	+	1	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 8; exon_id "ENSMUSE00001319734.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	exon	71494948	71495046	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 9; exon_id "ENSMUSE00001325858.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	CDS	71494948	71495046	.	+	0	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 9; exon_id "ENSMUSE00001325858.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	exon	71495406	71495632	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 10; exon_id "ENSMUSE00001330618.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	CDS	71495406	71495432	.	+	0	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 10; exon_id "ENSMUSE00001330618.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	stop_codon	71495433	71495435	.	+	0	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 10; exon_id "ENSMUSE00001330618.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	UTR	71469449	71469492	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 1; exon_id "ENSMUSE00001320125.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	UTR	71470862	71470875	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 2; exon_id "ENSMUSE00001331009.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	UTR	71495433	71495632	.	+	.	gene_id "ENSMUSG00000099531.1"; transcript_id "ENSMUST00000188958.1"; gene_type "protein_coding"; gene_name "Gm20869"; transcript_type "protein_coding"; transcript_name "Gm20869-201"; exon_number 10; exon_id "ENSMUSE00001330618.1"; level 2; protein_id "ENSMUSP00000139478.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046091.1"; havana_transcript "OTTMUST00000120331.1";
mm10-chrY	HAVANA	gene	71592909	71593223	.	-	.	gene_id "ENSMUSG00000100008.1"; gene_type "processed_pseudogene"; gene_name "Gm28481"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046092.1";
mm10-chrY	HAVANA	transcript	71592909	71593223	.	-	.	gene_id "ENSMUSG00000100008.1"; transcript_id "ENSMUST00000189231.1"; gene_type "processed_pseudogene"; gene_name "Gm28481"; transcript_type "processed_pseudogene"; transcript_name "Gm28481-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046092.1"; havana_transcript "OTTMUST00000120332.1";
mm10-chrY	HAVANA	exon	71592909	71593223	.	-	.	gene_id "ENSMUSG00000100008.1"; transcript_id "ENSMUST00000189231.1"; gene_type "processed_pseudogene"; gene_name "Gm28481"; transcript_type "processed_pseudogene"; transcript_name "Gm28481-201"; exon_number 1; exon_id "ENSMUSE00001327648.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046092.1"; havana_transcript "OTTMUST00000120332.1";
mm10-chrY	HAVANA	gene	71626238	71636635	.	-	.	gene_id "ENSMUSG00000101134.1"; gene_type "lincRNA"; gene_name "Gm28482"; level 2; havana_gene "OTTMUSG00000046093.1";
mm10-chrY	HAVANA	transcript	71626238	71636635	.	-	.	gene_id "ENSMUSG00000101134.1"; transcript_id "ENSMUST00000189350.1"; gene_type "lincRNA"; gene_name "Gm28482"; transcript_type "lincRNA"; transcript_name "Gm28482-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046093.1"; havana_transcript "OTTMUST00000120333.1";
mm10-chrY	HAVANA	exon	71636576	71636635	.	-	.	gene_id "ENSMUSG00000101134.1"; transcript_id "ENSMUST00000189350.1"; gene_type "lincRNA"; gene_name "Gm28482"; transcript_type "lincRNA"; transcript_name "Gm28482-201"; exon_number 1; exon_id "ENSMUSE00001321955.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046093.1"; havana_transcript "OTTMUST00000120333.1";
mm10-chrY	HAVANA	exon	71632833	71632974	.	-	.	gene_id "ENSMUSG00000101134.1"; transcript_id "ENSMUST00000189350.1"; gene_type "lincRNA"; gene_name "Gm28482"; transcript_type "lincRNA"; transcript_name "Gm28482-201"; exon_number 2; exon_id "ENSMUSE00001326923.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046093.1"; havana_transcript "OTTMUST00000120333.1";
mm10-chrY	HAVANA	exon	71627793	71627884	.	-	.	gene_id "ENSMUSG00000101134.1"; transcript_id "ENSMUST00000189350.1"; gene_type "lincRNA"; gene_name "Gm28482"; transcript_type "lincRNA"; transcript_name "Gm28482-201"; exon_number 3; exon_id "ENSMUSE00001330517.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046093.1"; havana_transcript "OTTMUST00000120333.1";
mm10-chrY	HAVANA	exon	71626238	71626395	.	-	.	gene_id "ENSMUSG00000101134.1"; transcript_id "ENSMUST00000189350.1"; gene_type "lincRNA"; gene_name "Gm28482"; transcript_type "lincRNA"; transcript_name "Gm28482-201"; exon_number 4; exon_id "ENSMUSE00001318616.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046093.1"; havana_transcript "OTTMUST00000120333.1";
mm10-chrY	HAVANA	gene	71629963	71633202	.	+	.	gene_id "ENSMUSG00000100537.1"; gene_type "lincRNA"; gene_name "Gm28485"; level 2; havana_gene "OTTMUSG00000046094.1";
mm10-chrY	HAVANA	transcript	71629963	71633202	.	+	.	gene_id "ENSMUSG00000100537.1"; transcript_id "ENSMUST00000185300.1"; gene_type "lincRNA"; gene_name "Gm28485"; transcript_type "lincRNA"; transcript_name "Gm28485-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046094.1"; havana_transcript "OTTMUST00000120334.1";
mm10-chrY	HAVANA	exon	71629963	71630603	.	+	.	gene_id "ENSMUSG00000100537.1"; transcript_id "ENSMUST00000185300.1"; gene_type "lincRNA"; gene_name "Gm28485"; transcript_type "lincRNA"; transcript_name "Gm28485-201"; exon_number 1; exon_id "ENSMUSE00001331113.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046094.1"; havana_transcript "OTTMUST00000120334.1";
mm10-chrY	HAVANA	exon	71631089	71631274	.	+	.	gene_id "ENSMUSG00000100537.1"; transcript_id "ENSMUST00000185300.1"; gene_type "lincRNA"; gene_name "Gm28485"; transcript_type "lincRNA"; transcript_name "Gm28485-201"; exon_number 2; exon_id "ENSMUSE00001320558.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046094.1"; havana_transcript "OTTMUST00000120334.1";
mm10-chrY	HAVANA	exon	71632004	71632187	.	+	.	gene_id "ENSMUSG00000100537.1"; transcript_id "ENSMUST00000185300.1"; gene_type "lincRNA"; gene_name "Gm28485"; transcript_type "lincRNA"; transcript_name "Gm28485-201"; exon_number 3; exon_id "ENSMUSE00001329959.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046094.1"; havana_transcript "OTTMUST00000120334.1";
mm10-chrY	HAVANA	exon	71632714	71633202	.	+	.	gene_id "ENSMUSG00000100537.1"; transcript_id "ENSMUST00000185300.1"; gene_type "lincRNA"; gene_name "Gm28485"; transcript_type "lincRNA"; transcript_name "Gm28485-201"; exon_number 4; exon_id "ENSMUSE00001323136.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046094.1"; havana_transcript "OTTMUST00000120334.1";
mm10-chrY	HAVANA	transcript	71630418	71632782	.	+	.	gene_id "ENSMUSG00000100537.1"; transcript_id "ENSMUST00000187125.1"; gene_type "lincRNA"; gene_name "Gm28485"; transcript_type "lincRNA"; transcript_name "Gm28485-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046094.1"; havana_transcript "OTTMUST00000120335.1";
mm10-chrY	HAVANA	exon	71630418	71630603	.	+	.	gene_id "ENSMUSG00000100537.1"; transcript_id "ENSMUST00000187125.1"; gene_type "lincRNA"; gene_name "Gm28485"; transcript_type "lincRNA"; transcript_name "Gm28485-202"; exon_number 1; exon_id "ENSMUSE00001319755.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046094.1"; havana_transcript "OTTMUST00000120335.1";
mm10-chrY	HAVANA	exon	71631093	71631274	.	+	.	gene_id "ENSMUSG00000100537.1"; transcript_id "ENSMUST00000187125.1"; gene_type "lincRNA"; gene_name "Gm28485"; transcript_type "lincRNA"; transcript_name "Gm28485-202"; exon_number 2; exon_id "ENSMUSE00001326698.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046094.1"; havana_transcript "OTTMUST00000120335.1";
mm10-chrY	HAVANA	exon	71632714	71632782	.	+	.	gene_id "ENSMUSG00000100537.1"; transcript_id "ENSMUST00000187125.1"; gene_type "lincRNA"; gene_name "Gm28485"; transcript_type "lincRNA"; transcript_name "Gm28485-202"; exon_number 3; exon_id "ENSMUSE00001327022.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046094.1"; havana_transcript "OTTMUST00000120335.1";
mm10-chrY	HAVANA	gene	71692043	71718226	.	+	.	gene_id "ENSMUSG00000100535.1"; gene_type "protein_coding"; gene_name "Gm20870"; level 2; havana_gene "OTTMUSG00000046095.1";
mm10-chrY	HAVANA	transcript	71692043	71718226	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	exon	71692043	71692086	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 1; exon_id "ENSMUSE00001320566.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	exon	71693453	71693584	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 2; exon_id "ENSMUSE00001332733.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	CDS	71693467	71693584	.	+	0	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 2; exon_id "ENSMUSE00001332733.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	start_codon	71693467	71693469	.	+	0	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 2; exon_id "ENSMUSE00001332733.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	exon	71698921	71698987	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 3; exon_id "ENSMUSE00001322380.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	CDS	71698921	71698987	.	+	2	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 3; exon_id "ENSMUSE00001322380.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	exon	71699633	71699667	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 4; exon_id "ENSMUSE00001327735.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	CDS	71699633	71699667	.	+	1	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 4; exon_id "ENSMUSE00001327735.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	exon	71706677	71706743	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 5; exon_id "ENSMUSE00001331022.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	CDS	71706677	71706743	.	+	2	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 5; exon_id "ENSMUSE00001331022.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	exon	71707319	71707353	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 6; exon_id "ENSMUSE00001325652.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	CDS	71707319	71707353	.	+	1	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 6; exon_id "ENSMUSE00001325652.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	exon	71714510	71714627	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 7; exon_id "ENSMUSE00001319229.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	CDS	71714510	71714627	.	+	2	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 7; exon_id "ENSMUSE00001319229.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	exon	71715412	71715511	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 8; exon_id "ENSMUSE00001329678.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	CDS	71715412	71715511	.	+	1	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 8; exon_id "ENSMUSE00001329678.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	exon	71717544	71717642	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 9; exon_id "ENSMUSE00001324051.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	CDS	71717544	71717642	.	+	0	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 9; exon_id "ENSMUSE00001324051.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	exon	71718002	71718226	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 10; exon_id "ENSMUSE00001328901.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	CDS	71718002	71718028	.	+	0	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 10; exon_id "ENSMUSE00001328901.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	stop_codon	71718029	71718031	.	+	0	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 10; exon_id "ENSMUSE00001328901.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	UTR	71692043	71692086	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 1; exon_id "ENSMUSE00001320566.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	UTR	71693453	71693466	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 2; exon_id "ENSMUSE00001332733.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	UTR	71718029	71718226	.	+	.	gene_id "ENSMUSG00000100535.1"; transcript_id "ENSMUST00000189315.1"; gene_type "protein_coding"; gene_name "Gm20870"; transcript_type "protein_coding"; transcript_name "Gm20870-201"; exon_number 10; exon_id "ENSMUSE00001328901.1"; level 2; protein_id "ENSMUSP00000139722.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046095.1"; havana_transcript "OTTMUST00000120336.1";
mm10-chrY	HAVANA	gene	71779869	71780564	.	-	.	gene_id "ENSMUSG00000099738.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28483"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046096.1";
mm10-chrY	HAVANA	transcript	71779869	71780564	.	-	.	gene_id "ENSMUSG00000099738.1"; transcript_id "ENSMUST00000189519.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28483"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28483-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046096.1"; havana_transcript "OTTMUST00000120337.1";
mm10-chrY	HAVANA	exon	71779869	71780564	.	-	.	gene_id "ENSMUSG00000099738.1"; transcript_id "ENSMUST00000189519.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28483"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28483-201"; exon_number 1; exon_id "ENSMUSE00001330978.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046096.1"; havana_transcript "OTTMUST00000120337.1";
mm10-chrY	HAVANA	gene	71816900	71817211	.	-	.	gene_id "ENSMUSG00000101988.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28484"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046097.1";
mm10-chrY	HAVANA	transcript	71816900	71817211	.	-	.	gene_id "ENSMUSG00000101988.1"; transcript_id "ENSMUST00000190606.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28484"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28484-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046097.1"; havana_transcript "OTTMUST00000120338.1";
mm10-chrY	HAVANA	exon	71816900	71817211	.	-	.	gene_id "ENSMUSG00000101988.1"; transcript_id "ENSMUST00000190606.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28484"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28484-201"; exon_number 1; exon_id "ENSMUSE00001324237.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046097.1"; havana_transcript "OTTMUST00000120338.1";
mm10-chrY	HAVANA	gene	71964607	71965059	.	-	.	gene_id "ENSMUSG00000101336.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28480"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046098.1";
mm10-chrY	HAVANA	transcript	71964607	71965059	.	-	.	gene_id "ENSMUSG00000101336.1"; transcript_id "ENSMUST00000186383.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28480"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28480-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046098.1"; havana_transcript "OTTMUST00000120339.1";
mm10-chrY	HAVANA	exon	71964607	71965059	.	-	.	gene_id "ENSMUSG00000101336.1"; transcript_id "ENSMUST00000186383.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28480"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28480-201"; exon_number 1; exon_id "ENSMUSE00001331349.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046098.1"; havana_transcript "OTTMUST00000120339.1";
mm10-chrY	HAVANA	gene	72038997	72039692	.	-	.	gene_id "ENSMUSG00000101593.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20842"; level 2; havana_gene "OTTMUSG00000046099.1";
mm10-chrY	HAVANA	transcript	72038997	72039692	.	-	.	gene_id "ENSMUSG00000101593.1"; transcript_id "ENSMUST00000187463.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20842"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20842-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046099.1"; havana_transcript "OTTMUST00000120340.1";
mm10-chrY	HAVANA	exon	72038997	72039692	.	-	.	gene_id "ENSMUSG00000101593.1"; transcript_id "ENSMUST00000187463.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20842"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20842-201"; exon_number 1; exon_id "ENSMUSE00001326003.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046099.1"; havana_transcript "OTTMUST00000120340.1";
mm10-chrY	HAVANA	gene	72060142	72070812	.	-	.	gene_id "ENSMUSG00000101444.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046100.1";
mm10-chrY	HAVANA	transcript	72060142	72070812	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190450.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-208"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120341.1";
mm10-chrY	HAVANA	exon	72070677	72070812	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190450.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-208"; exon_number 1; exon_id "ENSMUSE00001329461.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120341.1";
mm10-chrY	HAVANA	exon	72061303	72061436	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190450.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-208"; exon_number 2; exon_id "ENSMUSE00001328865.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120341.1";
mm10-chrY	HAVANA	exon	72060142	72061008	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190450.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-208"; exon_number 3; exon_id "ENSMUSE00001321942.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120341.1";
mm10-chrY	HAVANA	transcript	72060712	72070812	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190621.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-209"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120342.1";
mm10-chrY	HAVANA	exon	72070677	72070812	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190621.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-209"; exon_number 1; exon_id "ENSMUSE00001329461.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120342.1";
mm10-chrY	HAVANA	exon	72068695	72068825	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190621.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-209"; exon_number 2; exon_id "ENSMUSE00001319198.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120342.1";
mm10-chrY	HAVANA	exon	72067993	72068210	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190621.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-209"; exon_number 3; exon_id "ENSMUSE00001331877.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120342.1";
mm10-chrY	HAVANA	exon	72067114	72067297	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190621.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-209"; exon_number 4; exon_id "ENSMUSE00001331734.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120342.1";
mm10-chrY	HAVANA	exon	72061303	72061436	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190621.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-209"; exon_number 5; exon_id "ENSMUSE00001328865.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120342.1";
mm10-chrY	HAVANA	exon	72060712	72061008	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190621.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-209"; exon_number 6; exon_id "ENSMUSE00001328565.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120342.1";
mm10-chrY	HAVANA	transcript	72066529	72070724	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190860.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-210"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120343.1";
mm10-chrY	HAVANA	exon	72070677	72070724	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190860.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-210"; exon_number 1; exon_id "ENSMUSE00001323206.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120343.1";
mm10-chrY	HAVANA	exon	72067114	72067297	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190860.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-210"; exon_number 2; exon_id "ENSMUSE00001331734.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120343.1";
mm10-chrY	HAVANA	exon	72066529	72066598	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000190860.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-210"; exon_number 3; exon_id "ENSMUSE00001318402.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120343.1";
mm10-chrY	HAVANA	transcript	72066531	72070730	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000186776.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-203"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120344.1";
mm10-chrY	HAVANA	exon	72070677	72070730	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000186776.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-203"; exon_number 1; exon_id "ENSMUSE00001322420.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120344.1";
mm10-chrY	HAVANA	exon	72068695	72068825	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000186776.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-203"; exon_number 2; exon_id "ENSMUSE00001319198.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120344.1";
mm10-chrY	HAVANA	exon	72067993	72068210	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000186776.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-203"; exon_number 3; exon_id "ENSMUSE00001331877.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120344.1";
mm10-chrY	HAVANA	exon	72067114	72067297	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000186776.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-203"; exon_number 4; exon_id "ENSMUSE00001331734.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120344.1";
mm10-chrY	HAVANA	exon	72066531	72066598	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000186776.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-203"; exon_number 5; exon_id "ENSMUSE00001328407.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120344.1";
mm10-chrY	HAVANA	transcript	72066554	72068792	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188219.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-204"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120345.1";
mm10-chrY	HAVANA	exon	72068695	72068792	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188219.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-204"; exon_number 1; exon_id "ENSMUSE00001318777.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120345.1";
mm10-chrY	HAVANA	exon	72067114	72067297	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188219.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-204"; exon_number 2; exon_id "ENSMUSE00001331734.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120345.1";
mm10-chrY	HAVANA	exon	72066554	72066598	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188219.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-204"; exon_number 3; exon_id "ENSMUSE00001324442.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120345.1";
mm10-chrY	HAVANA	transcript	72066554	72070755	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188268.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-205"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120346.1";
mm10-chrY	HAVANA	exon	72070677	72070755	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188268.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-205"; exon_number 1; exon_id "ENSMUSE00001324265.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120346.1";
mm10-chrY	HAVANA	exon	72068695	72068825	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188268.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-205"; exon_number 2; exon_id "ENSMUSE00001319198.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120346.1";
mm10-chrY	HAVANA	exon	72066554	72066598	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188268.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-205"; exon_number 3; exon_id "ENSMUSE00001324442.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120346.1";
mm10-chrY	HAVANA	transcript	72066557	72070756	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188668.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-206"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120347.1";
mm10-chrY	HAVANA	exon	72070677	72070756	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188668.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-206"; exon_number 1; exon_id "ENSMUSE00001323940.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120347.1";
mm10-chrY	HAVANA	exon	72069136	72069372	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188668.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-206"; exon_number 2; exon_id "ENSMUSE00001334336.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120347.1";
mm10-chrY	HAVANA	exon	72067114	72067297	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188668.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-206"; exon_number 3; exon_id "ENSMUSE00001331734.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120347.1";
mm10-chrY	HAVANA	exon	72066557	72066598	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000188668.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-206"; exon_number 4; exon_id "ENSMUSE00001332338.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120347.1";
mm10-chrY	HAVANA	transcript	72067155	72070712	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000185781.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120348.1";
mm10-chrY	HAVANA	exon	72070677	72070712	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000185781.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-201"; exon_number 1; exon_id "ENSMUSE00001323909.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120348.1";
mm10-chrY	HAVANA	exon	72067993	72068210	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000185781.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-201"; exon_number 2; exon_id "ENSMUSE00001331877.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120348.1";
mm10-chrY	HAVANA	exon	72067155	72067297	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000185781.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-201"; exon_number 3; exon_id "ENSMUSE00001318992.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120348.1";
mm10-chrY	HAVANA	transcript	72067209	72068792	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000189351.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-207"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120349.1";
mm10-chrY	HAVANA	exon	72068695	72068792	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000189351.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-207"; exon_number 1; exon_id "ENSMUSE00001318777.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120349.1";
mm10-chrY	HAVANA	exon	72067993	72068035	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000189351.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-207"; exon_number 2; exon_id "ENSMUSE00001320808.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120349.1";
mm10-chrY	HAVANA	exon	72067209	72067297	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000189351.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "processed_transcript"; transcript_name "Gm29179-207"; exon_number 3; exon_id "ENSMUSE00001335226.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120349.1";
mm10-chrY	HAVANA	transcript	72068615	72069229	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000186138.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29179-202"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120350.1";
mm10-chrY	HAVANA	exon	72068615	72069229	.	-	.	gene_id "ENSMUSG00000101444.6"; transcript_id "ENSMUST00000186138.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29179"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29179-202"; exon_number 1; exon_id "ENSMUSE00001330315.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046100.1"; havana_transcript "OTTMUST00000120350.1";
mm10-chrY	HAVANA	gene	72103391	72104086	.	-	.	gene_id "ENSMUSG00000099733.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21880"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046101.1";
mm10-chrY	HAVANA	transcript	72103391	72104086	.	-	.	gene_id "ENSMUSG00000099733.1"; transcript_id "ENSMUST00000187275.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21880"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21880-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046101.1"; havana_transcript "OTTMUST00000120351.1";
mm10-chrY	HAVANA	exon	72103391	72104086	.	-	.	gene_id "ENSMUSG00000099733.1"; transcript_id "ENSMUST00000187275.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21880"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21880-201"; exon_number 1; exon_id "ENSMUSE00001331871.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046101.1"; havana_transcript "OTTMUST00000120351.1";
mm10-chrY	HAVANA	gene	72122523	72122837	.	+	.	gene_id "ENSMUSG00000101339.1"; gene_type "processed_pseudogene"; gene_name "Gm29180"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046102.1";
mm10-chrY	HAVANA	transcript	72122523	72122837	.	+	.	gene_id "ENSMUSG00000101339.1"; transcript_id "ENSMUST00000190003.1"; gene_type "processed_pseudogene"; gene_name "Gm29180"; transcript_type "processed_pseudogene"; transcript_name "Gm29180-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046102.1"; havana_transcript "OTTMUST00000120352.1";
mm10-chrY	HAVANA	exon	72122523	72122837	.	+	.	gene_id "ENSMUSG00000101339.1"; transcript_id "ENSMUST00000190003.1"; gene_type "processed_pseudogene"; gene_name "Gm29180"; transcript_type "processed_pseudogene"; transcript_name "Gm29180-201"; exon_number 1; exon_id "ENSMUSE00001327631.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046102.1"; havana_transcript "OTTMUST00000120352.1";
mm10-chrY	HAVANA	gene	72158991	72159686	.	+	.	gene_id "ENSMUSG00000099731.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29181"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046103.1";
mm10-chrY	HAVANA	transcript	72158991	72159686	.	+	.	gene_id "ENSMUSG00000099731.1"; transcript_id "ENSMUST00000191288.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29181"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29181-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046103.1"; havana_transcript "OTTMUST00000120353.1";
mm10-chrY	HAVANA	exon	72158991	72159686	.	+	.	gene_id "ENSMUSG00000099731.1"; transcript_id "ENSMUST00000191288.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29181"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29181-201"; exon_number 1; exon_id "ENSMUSE00001329586.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046103.1"; havana_transcript "OTTMUST00000120353.1";
mm10-chrY	HAVANA	gene	72220863	72247118	.	-	.	gene_id "ENSMUSG00000096902.7"; gene_type "protein_coding"; gene_name "Gm20843"; level 2; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	HAVANA	transcript	72220863	72247118	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	exon	72247075	72247118	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 1; exon_id "ENSMUSE00001324112.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	exon	72245581	72245712	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 2; exon_id "ENSMUSE00001331171.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	CDS	72245581	72245698	.	-	0	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 2; exon_id "ENSMUSE00001331171.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	start_codon	72245696	72245698	.	-	0	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 2; exon_id "ENSMUSE00001331171.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	exon	72240179	72240245	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 3; exon_id "ENSMUSE00001046009.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	CDS	72240179	72240245	.	-	2	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 3; exon_id "ENSMUSE00001046009.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	exon	72239478	72239512	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 4; exon_id "ENSMUSE00001003326.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	CDS	72239478	72239512	.	-	1	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 4; exon_id "ENSMUSE00001003326.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	exon	72232385	72232451	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 5; exon_id "ENSMUSE00001334769.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	CDS	72232385	72232451	.	-	2	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 5; exon_id "ENSMUSE00001334769.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	exon	72231768	72231802	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 6; exon_id "ENSMUSE00001325075.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	CDS	72231768	72231802	.	-	1	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 6; exon_id "ENSMUSE00001325075.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	exon	72224472	72224589	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 7; exon_id "ENSMUSE00000976160.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	CDS	72224472	72224589	.	-	2	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 7; exon_id "ENSMUSE00000976160.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	exon	72223596	72223695	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 8; exon_id "ENSMUSE00000974206.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	CDS	72223596	72223695	.	-	1	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 8; exon_id "ENSMUSE00000974206.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	exon	72221450	72221548	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 9; exon_id "ENSMUSE00001066866.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	CDS	72221450	72221548	.	-	0	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 9; exon_id "ENSMUSE00001066866.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	exon	72220863	72221090	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 10; exon_id "ENSMUSE00001335020.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	CDS	72221064	72221090	.	-	0	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 10; exon_id "ENSMUSE00001335020.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	stop_codon	72221061	72221063	.	-	0	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 10; exon_id "ENSMUSE00001335020.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	UTR	72247075	72247118	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 1; exon_id "ENSMUSE00001324112.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	UTR	72245699	72245712	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 2; exon_id "ENSMUSE00001331171.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	HAVANA	UTR	72220863	72221063	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000191305.6"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-202"; exon_number 10; exon_id "ENSMUSE00001335020.1"; level 2; protein_id "ENSMUSP00000140105.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "upstream_ATG"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046106.1"; havana_transcript "OTTMUST00000120357.1";
mm10-chrY	ENSEMBL	transcript	72221061	72245698	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	exon	72245581	72245698	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 1; exon_id "ENSMUSE00000967960.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	CDS	72245581	72245698	.	-	0	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 1; exon_id "ENSMUSE00000967960.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	start_codon	72245696	72245698	.	-	0	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 1; exon_id "ENSMUSE00000967960.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	exon	72240179	72240245	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 2; exon_id "ENSMUSE00001046009.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	CDS	72240179	72240245	.	-	2	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 2; exon_id "ENSMUSE00001046009.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	exon	72239478	72239512	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 3; exon_id "ENSMUSE00001003326.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	CDS	72239478	72239512	.	-	1	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 3; exon_id "ENSMUSE00001003326.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	exon	72224472	72224589	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 4; exon_id "ENSMUSE00000976160.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	CDS	72224472	72224589	.	-	2	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 4; exon_id "ENSMUSE00000976160.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	exon	72223596	72223695	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 5; exon_id "ENSMUSE00000974206.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	CDS	72223596	72223695	.	-	1	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 5; exon_id "ENSMUSE00000974206.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	exon	72221450	72221548	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 6; exon_id "ENSMUSE00001066866.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	CDS	72221450	72221548	.	-	0	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 6; exon_id "ENSMUSE00001066866.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	exon	72221061	72221090	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 7; exon_id "ENSMUSE00001011915.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	CDS	72221064	72221090	.	-	0	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 7; exon_id "ENSMUSE00001011915.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	stop_codon	72221061	72221063	.	-	0	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 7; exon_id "ENSMUSE00001011915.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	ENSEMBL	UTR	72221061	72221063	.	-	.	gene_id "ENSMUSG00000096902.7"; transcript_id "ENSMUST00000178505.1"; gene_type "protein_coding"; gene_name "Gm20843"; transcript_type "protein_coding"; transcript_name "Gm20843-201"; exon_number 7; exon_id "ENSMUSE00001011915.1"; level 3; protein_id "ENSMUSP00000136575.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046106.1";
mm10-chrY	HAVANA	gene	72271926	72275164	.	+	.	gene_id "ENSMUSG00000100694.1"; gene_type "lincRNA"; gene_name "Gm29182"; level 2; havana_gene "OTTMUSG00000046107.1";
mm10-chrY	HAVANA	transcript	72271926	72275164	.	+	.	gene_id "ENSMUSG00000100694.1"; transcript_id "ENSMUST00000191008.1"; gene_type "lincRNA"; gene_name "Gm29182"; transcript_type "lincRNA"; transcript_name "Gm29182-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046107.1"; havana_transcript "OTTMUST00000120358.1";
mm10-chrY	HAVANA	exon	72271926	72272565	.	+	.	gene_id "ENSMUSG00000100694.1"; transcript_id "ENSMUST00000191008.1"; gene_type "lincRNA"; gene_name "Gm29182"; transcript_type "lincRNA"; transcript_name "Gm29182-202"; exon_number 1; exon_id "ENSMUSE00001324176.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046107.1"; havana_transcript "OTTMUST00000120358.1";
mm10-chrY	HAVANA	exon	72273051	72273236	.	+	.	gene_id "ENSMUSG00000100694.1"; transcript_id "ENSMUST00000191008.1"; gene_type "lincRNA"; gene_name "Gm29182"; transcript_type "lincRNA"; transcript_name "Gm29182-202"; exon_number 2; exon_id "ENSMUSE00001319934.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046107.1"; havana_transcript "OTTMUST00000120358.1";
mm10-chrY	HAVANA	exon	72273966	72274149	.	+	.	gene_id "ENSMUSG00000100694.1"; transcript_id "ENSMUST00000191008.1"; gene_type "lincRNA"; gene_name "Gm29182"; transcript_type "lincRNA"; transcript_name "Gm29182-202"; exon_number 3; exon_id "ENSMUSE00001324249.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046107.1"; havana_transcript "OTTMUST00000120358.1";
mm10-chrY	HAVANA	exon	72274676	72275164	.	+	.	gene_id "ENSMUSG00000100694.1"; transcript_id "ENSMUST00000191008.1"; gene_type "lincRNA"; gene_name "Gm29182"; transcript_type "lincRNA"; transcript_name "Gm29182-202"; exon_number 4; exon_id "ENSMUSE00001333212.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046107.1"; havana_transcript "OTTMUST00000120358.1";
mm10-chrY	HAVANA	transcript	72272379	72274744	.	+	.	gene_id "ENSMUSG00000100694.1"; transcript_id "ENSMUST00000187534.1"; gene_type "lincRNA"; gene_name "Gm29182"; transcript_type "lincRNA"; transcript_name "Gm29182-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046107.1"; havana_transcript "OTTMUST00000120359.1";
mm10-chrY	HAVANA	exon	72272379	72272565	.	+	.	gene_id "ENSMUSG00000100694.1"; transcript_id "ENSMUST00000187534.1"; gene_type "lincRNA"; gene_name "Gm29182"; transcript_type "lincRNA"; transcript_name "Gm29182-201"; exon_number 1; exon_id "ENSMUSE00001319814.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046107.1"; havana_transcript "OTTMUST00000120359.1";
mm10-chrY	HAVANA	exon	72273055	72273236	.	+	.	gene_id "ENSMUSG00000100694.1"; transcript_id "ENSMUST00000187534.1"; gene_type "lincRNA"; gene_name "Gm29182"; transcript_type "lincRNA"; transcript_name "Gm29182-201"; exon_number 2; exon_id "ENSMUSE00001336035.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046107.1"; havana_transcript "OTTMUST00000120359.1";
mm10-chrY	HAVANA	exon	72274676	72274744	.	+	.	gene_id "ENSMUSG00000100694.1"; transcript_id "ENSMUST00000187534.1"; gene_type "lincRNA"; gene_name "Gm29182"; transcript_type "lincRNA"; transcript_name "Gm29182-201"; exon_number 3; exon_id "ENSMUSE00001333232.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046107.1"; havana_transcript "OTTMUST00000120359.1";
mm10-chrY	HAVANA	gene	72382594	72383247	.	-	.	gene_id "ENSMUSG00000101844.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20844"; level 2; havana_gene "OTTMUSG00000046108.1";
mm10-chrY	HAVANA	transcript	72382594	72383247	.	-	.	gene_id "ENSMUSG00000101844.1"; transcript_id "ENSMUST00000186101.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20844"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20844-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046108.1"; havana_transcript "OTTMUST00000120360.1";
mm10-chrY	HAVANA	exon	72382594	72383247	.	-	.	gene_id "ENSMUSG00000101844.1"; transcript_id "ENSMUST00000186101.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20844"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20844-201"; exon_number 1; exon_id "ENSMUSE00001325165.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046108.1"; havana_transcript "OTTMUST00000120360.1";
mm10-chrY	HAVANA	gene	72404732	72415274	.	-	.	gene_id "ENSMUSG00000100898.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046109.3";
mm10-chrY	HAVANA	transcript	72404732	72415274	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000188496.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-207"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120361.1";
mm10-chrY	HAVANA	exon	72415139	72415274	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000188496.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-207"; exon_number 1; exon_id "ENSMUSE00001321549.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120361.1";
mm10-chrY	HAVANA	exon	72405769	72405902	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000188496.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-207"; exon_number 2; exon_id "ENSMUSE00001324713.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120361.1";
mm10-chrY	HAVANA	exon	72404732	72405474	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000188496.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-207"; exon_number 3; exon_id "ENSMUSE00001325670.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120361.1";
mm10-chrY	HAVANA	transcript	72405174	72415274	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186312.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120362.1";
mm10-chrY	HAVANA	exon	72415139	72415274	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186312.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-203"; exon_number 1; exon_id "ENSMUSE00001321549.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120362.1";
mm10-chrY	HAVANA	exon	72413158	72413288	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186312.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-203"; exon_number 2; exon_id "ENSMUSE00001328743.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120362.1";
mm10-chrY	HAVANA	exon	72412456	72412673	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186312.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-203"; exon_number 3; exon_id "ENSMUSE00001329542.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120362.1";
mm10-chrY	HAVANA	exon	72411577	72411760	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186312.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-203"; exon_number 4; exon_id "ENSMUSE00001326426.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120362.1";
mm10-chrY	HAVANA	exon	72405769	72405902	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186312.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-203"; exon_number 5; exon_id "ENSMUSE00001324713.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120362.1";
mm10-chrY	HAVANA	exon	72405174	72405474	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186312.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-203"; exon_number 6; exon_id "ENSMUSE00001320640.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120362.1";
mm10-chrY	HAVANA	transcript	72410992	72415186	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000189271.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-209"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120366.1";
mm10-chrY	HAVANA	exon	72415139	72415186	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000189271.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-209"; exon_number 1; exon_id "ENSMUSE00001326173.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120366.1";
mm10-chrY	HAVANA	exon	72411577	72411760	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000189271.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-209"; exon_number 2; exon_id "ENSMUSE00001326426.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120366.1";
mm10-chrY	HAVANA	exon	72410992	72411061	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000189271.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-209"; exon_number 3; exon_id "ENSMUSE00001333949.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120366.1";
mm10-chrY	HAVANA	transcript	72410992	72415190	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000190636.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-210"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120367.1";
mm10-chrY	HAVANA	exon	72415139	72415190	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000190636.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-210"; exon_number 1; exon_id "ENSMUSE00001327782.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120367.1";
mm10-chrY	HAVANA	exon	72413599	72413835	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000190636.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-210"; exon_number 2; exon_id "ENSMUSE00001328403.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120367.1";
mm10-chrY	HAVANA	exon	72411577	72411760	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000190636.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-210"; exon_number 3; exon_id "ENSMUSE00001326426.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120367.1";
mm10-chrY	HAVANA	exon	72410992	72411061	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000190636.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-210"; exon_number 4; exon_id "ENSMUSE00001333949.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120367.1";
mm10-chrY	HAVANA	transcript	72410994	72415192	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186224.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120368.1";
mm10-chrY	HAVANA	exon	72415139	72415192	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186224.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-202"; exon_number 1; exon_id "ENSMUSE00001327841.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120368.1";
mm10-chrY	HAVANA	exon	72413158	72413288	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186224.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-202"; exon_number 2; exon_id "ENSMUSE00001328743.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120368.1";
mm10-chrY	HAVANA	exon	72412456	72412673	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186224.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-202"; exon_number 3; exon_id "ENSMUSE00001329542.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120368.1";
mm10-chrY	HAVANA	exon	72411577	72411760	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186224.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-202"; exon_number 4; exon_id "ENSMUSE00001326426.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120368.1";
mm10-chrY	HAVANA	exon	72410994	72411061	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186224.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-202"; exon_number 5; exon_id "ENSMUSE00001328062.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120368.1";
mm10-chrY	HAVANA	transcript	72411020	72413253	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000185816.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120370.1";
mm10-chrY	HAVANA	exon	72413158	72413253	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000185816.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-201"; exon_number 1; exon_id "ENSMUSE00001320589.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120370.1";
mm10-chrY	HAVANA	exon	72411020	72411061	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000185816.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-201"; exon_number 2; exon_id "ENSMUSE00001330279.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120370.1";
mm10-chrY	HAVANA	transcript	72411020	72413255	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000187819.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120371.1";
mm10-chrY	HAVANA	exon	72413158	72413255	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000187819.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-206"; exon_number 1; exon_id "ENSMUSE00001318842.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120371.1";
mm10-chrY	HAVANA	exon	72411577	72411760	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000187819.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-206"; exon_number 2; exon_id "ENSMUSE00001326426.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120371.1";
mm10-chrY	HAVANA	exon	72411020	72411061	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000187819.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-206"; exon_number 3; exon_id "ENSMUSE00001330279.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120371.1";
mm10-chrY	HAVANA	transcript	72411618	72415174	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000187750.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-205"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120369.1";
mm10-chrY	HAVANA	exon	72415139	72415174	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000187750.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-205"; exon_number 1; exon_id "ENSMUSE00001327753.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120369.1";
mm10-chrY	HAVANA	exon	72412456	72412673	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000187750.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-205"; exon_number 2; exon_id "ENSMUSE00001329542.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120369.1";
mm10-chrY	HAVANA	exon	72411618	72411760	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000187750.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-205"; exon_number 3; exon_id "ENSMUSE00001322852.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120369.1";
mm10-chrY	HAVANA	transcript	72411673	72413255	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000188915.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-208"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120372.1";
mm10-chrY	HAVANA	exon	72413158	72413255	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000188915.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-208"; exon_number 1; exon_id "ENSMUSE00001318842.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120372.1";
mm10-chrY	HAVANA	exon	72412456	72412498	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000188915.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-208"; exon_number 2; exon_id "ENSMUSE00001335582.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120372.1";
mm10-chrY	HAVANA	exon	72411673	72411760	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000188915.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "processed_transcript"; transcript_name "Gm29178-208"; exon_number 3; exon_id "ENSMUSE00001332670.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120372.1";
mm10-chrY	HAVANA	transcript	72413078	72413692	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186784.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29178-204"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120363.1";
mm10-chrY	HAVANA	exon	72413078	72413692	.	-	.	gene_id "ENSMUSG00000100898.6"; transcript_id "ENSMUST00000186784.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29178"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29178-204"; exon_number 1; exon_id "ENSMUSE00001325952.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046109.3"; havana_transcript "OTTMUST00000120363.1";
mm10-chrY	HAVANA	gene	72449783	72450478	.	-	.	gene_id "ENSMUSG00000101857.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21757"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046170.1";
mm10-chrY	HAVANA	transcript	72449783	72450478	.	-	.	gene_id "ENSMUSG00000101857.1"; transcript_id "ENSMUST00000191075.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21757"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21757-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046170.1"; havana_transcript "OTTMUST00000120434.1";
mm10-chrY	HAVANA	exon	72449783	72450478	.	-	.	gene_id "ENSMUSG00000101857.1"; transcript_id "ENSMUST00000191075.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21757"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21757-201"; exon_number 1; exon_id "ENSMUSE00001324701.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046170.1"; havana_transcript "OTTMUST00000120434.1";
mm10-chrY	HAVANA	gene	72635212	72635907	.	-	.	gene_id "ENSMUSG00000101836.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28968"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046171.1";
mm10-chrY	HAVANA	transcript	72635212	72635907	.	-	.	gene_id "ENSMUSG00000101836.1"; transcript_id "ENSMUST00000190413.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28968"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28968-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046171.1"; havana_transcript "OTTMUST00000120435.1";
mm10-chrY	HAVANA	exon	72635212	72635907	.	-	.	gene_id "ENSMUSG00000101836.1"; transcript_id "ENSMUST00000190413.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28968"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28968-201"; exon_number 1; exon_id "ENSMUSE00001325326.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046171.1"; havana_transcript "OTTMUST00000120435.1";
mm10-chrY	HAVANA	gene	72672209	72672523	.	-	.	gene_id "ENSMUSG00000102008.1"; gene_type "processed_pseudogene"; gene_name "Gm28495"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046172.1";
mm10-chrY	HAVANA	transcript	72672209	72672523	.	-	.	gene_id "ENSMUSG00000102008.1"; transcript_id "ENSMUST00000188452.1"; gene_type "processed_pseudogene"; gene_name "Gm28495"; transcript_type "processed_pseudogene"; transcript_name "Gm28495-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046172.1"; havana_transcript "OTTMUST00000120436.1";
mm10-chrY	HAVANA	exon	72672209	72672523	.	-	.	gene_id "ENSMUSG00000102008.1"; transcript_id "ENSMUST00000188452.1"; gene_type "processed_pseudogene"; gene_name "Gm28495"; transcript_type "processed_pseudogene"; transcript_name "Gm28495-201"; exon_number 1; exon_id "ENSMUSE00001327698.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046172.1"; havana_transcript "OTTMUST00000120436.1";
mm10-chrY	HAVANA	gene	72819638	72820330	.	-	.	gene_id "ENSMUSG00000100869.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20846"; level 2; havana_gene "OTTMUSG00000046173.1";
mm10-chrY	HAVANA	transcript	72819638	72820330	.	-	.	gene_id "ENSMUSG00000100869.1"; transcript_id "ENSMUST00000188700.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20846"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20846-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046173.1"; havana_transcript "OTTMUST00000120437.1";
mm10-chrY	HAVANA	exon	72819638	72820330	.	-	.	gene_id "ENSMUSG00000100869.1"; transcript_id "ENSMUST00000188700.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20846"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20846-201"; exon_number 1; exon_id "ENSMUSE00001329190.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046173.1"; havana_transcript "OTTMUST00000120437.1";
mm10-chrY	HAVANA	gene	72894527	72895204	.	-	.	gene_id "ENSMUSG00000101277.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20847"; level 2; havana_gene "OTTMUSG00000046174.1";
mm10-chrY	HAVANA	transcript	72894527	72895204	.	-	.	gene_id "ENSMUSG00000101277.1"; transcript_id "ENSMUST00000186066.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20847"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20847-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046174.1"; havana_transcript "OTTMUST00000120438.1";
mm10-chrY	HAVANA	exon	72894527	72895204	.	-	.	gene_id "ENSMUSG00000101277.1"; transcript_id "ENSMUST00000186066.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20847"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20847-201"; exon_number 1; exon_id "ENSMUSE00001328834.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046174.1"; havana_transcript "OTTMUST00000120438.1";
mm10-chrY	HAVANA	gene	72968032	72968709	.	-	.	gene_id "ENSMUSG00000099371.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20848"; level 2; havana_gene "OTTMUSG00000046175.1";
mm10-chrY	HAVANA	transcript	72968032	72968709	.	-	.	gene_id "ENSMUSG00000099371.1"; transcript_id "ENSMUST00000190836.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20848"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20848-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046175.1"; havana_transcript "OTTMUST00000120439.1";
mm10-chrY	HAVANA	exon	72968032	72968709	.	-	.	gene_id "ENSMUSG00000099371.1"; transcript_id "ENSMUST00000190836.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20848"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20848-201"; exon_number 1; exon_id "ENSMUSE00001322467.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046175.1"; havana_transcript "OTTMUST00000120439.1";
mm10-chrY	HAVANA	gene	72989161	72999814	.	-	.	gene_id "ENSMUSG00000102129.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046176.1";
mm10-chrY	HAVANA	transcript	72989161	72999814	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186554.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-204"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120441.1";
mm10-chrY	HAVANA	exon	72999679	72999814	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186554.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-204"; exon_number 1; exon_id "ENSMUSE00001318914.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120441.1";
mm10-chrY	HAVANA	exon	72990321	72990454	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186554.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-204"; exon_number 2; exon_id "ENSMUSE00001323092.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120441.1";
mm10-chrY	HAVANA	exon	72989161	72990026	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186554.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-204"; exon_number 3; exon_id "ENSMUSE00001335339.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120441.1";
mm10-chrY	HAVANA	transcript	72989249	72999814	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186757.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-205"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120442.1";
mm10-chrY	HAVANA	exon	72999679	72999814	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186757.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-205"; exon_number 1; exon_id "ENSMUSE00001318914.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120442.1";
mm10-chrY	HAVANA	exon	72997693	72997823	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186757.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-205"; exon_number 2; exon_id "ENSMUSE00001328696.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120442.1";
mm10-chrY	HAVANA	exon	72996991	72997208	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186757.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-205"; exon_number 3; exon_id "ENSMUSE00001322999.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120442.1";
mm10-chrY	HAVANA	exon	72996113	72996296	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186757.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-205"; exon_number 4; exon_id "ENSMUSE00001334451.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120442.1";
mm10-chrY	HAVANA	exon	72990321	72990454	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186757.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-205"; exon_number 5; exon_id "ENSMUSE00001323092.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120442.1";
mm10-chrY	HAVANA	exon	72989249	72990026	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186757.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-205"; exon_number 6; exon_id "ENSMUSE00001326695.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120442.1";
mm10-chrY	HAVANA	transcript	72995528	72999726	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186094.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-203"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120443.1";
mm10-chrY	HAVANA	exon	72999679	72999726	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186094.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-203"; exon_number 1; exon_id "ENSMUSE00001324724.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120443.1";
mm10-chrY	HAVANA	exon	72996113	72996296	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186094.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-203"; exon_number 2; exon_id "ENSMUSE00001334451.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120443.1";
mm10-chrY	HAVANA	exon	72995528	72995597	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000186094.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-203"; exon_number 3; exon_id "ENSMUSE00001332571.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120443.1";
mm10-chrY	HAVANA	transcript	72995530	72999732	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000187568.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120444.1";
mm10-chrY	HAVANA	exon	72999679	72999732	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000187568.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-206"; exon_number 1; exon_id "ENSMUSE00001335752.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120444.1";
mm10-chrY	HAVANA	exon	72997693	72997823	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000187568.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-206"; exon_number 2; exon_id "ENSMUSE00001328696.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120444.1";
mm10-chrY	HAVANA	exon	72996991	72997208	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000187568.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-206"; exon_number 3; exon_id "ENSMUSE00001322999.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120444.1";
mm10-chrY	HAVANA	exon	72996113	72996296	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000187568.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-206"; exon_number 4; exon_id "ENSMUSE00001334451.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120444.1";
mm10-chrY	HAVANA	exon	72995530	72995597	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000187568.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-206"; exon_number 5; exon_id "ENSMUSE00001323490.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120444.1";
mm10-chrY	HAVANA	transcript	72995553	72997790	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000188989.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-207"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120445.1";
mm10-chrY	HAVANA	exon	72997693	72997790	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000188989.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-207"; exon_number 1; exon_id "ENSMUSE00001321093.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120445.1";
mm10-chrY	HAVANA	exon	72996113	72996296	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000188989.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-207"; exon_number 2; exon_id "ENSMUSE00001334451.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120445.1";
mm10-chrY	HAVANA	exon	72995553	72995597	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000188989.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-207"; exon_number 3; exon_id "ENSMUSE00001332689.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120445.1";
mm10-chrY	HAVANA	transcript	72995553	72999757	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190302.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-209"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120446.1";
mm10-chrY	HAVANA	exon	72999679	72999757	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190302.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-209"; exon_number 1; exon_id "ENSMUSE00001320336.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120446.1";
mm10-chrY	HAVANA	exon	72997693	72997823	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190302.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-209"; exon_number 2; exon_id "ENSMUSE00001328696.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120446.1";
mm10-chrY	HAVANA	exon	72995553	72995597	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190302.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-209"; exon_number 3; exon_id "ENSMUSE00001332689.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120446.1";
mm10-chrY	HAVANA	transcript	72995556	72999757	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190952.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-210"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120447.1";
mm10-chrY	HAVANA	exon	72999679	72999757	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190952.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-210"; exon_number 1; exon_id "ENSMUSE00001320336.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120447.1";
mm10-chrY	HAVANA	exon	72995556	72995597	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190952.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-210"; exon_number 2; exon_id "ENSMUSE00001324528.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120447.1";
mm10-chrY	HAVANA	transcript	72995556	72999758	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000185228.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120448.1";
mm10-chrY	HAVANA	exon	72999679	72999758	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000185228.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-202"; exon_number 1; exon_id "ENSMUSE00001325879.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120448.1";
mm10-chrY	HAVANA	exon	72998134	72998370	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000185228.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-202"; exon_number 2; exon_id "ENSMUSE00001330799.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120448.1";
mm10-chrY	HAVANA	exon	72996113	72996296	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000185228.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-202"; exon_number 3; exon_id "ENSMUSE00001334451.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120448.1";
mm10-chrY	HAVANA	exon	72995556	72995597	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000185228.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-202"; exon_number 4; exon_id "ENSMUSE00001324528.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120448.1";
mm10-chrY	HAVANA	transcript	72996154	72999714	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190200.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-208"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120449.1";
mm10-chrY	HAVANA	exon	72999679	72999714	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190200.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-208"; exon_number 1; exon_id "ENSMUSE00001322047.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120449.1";
mm10-chrY	HAVANA	exon	72996991	72997208	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190200.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-208"; exon_number 2; exon_id "ENSMUSE00001322999.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120449.1";
mm10-chrY	HAVANA	exon	72996154	72996296	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190200.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-208"; exon_number 3; exon_id "ENSMUSE00001326410.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120449.1";
mm10-chrY	HAVANA	transcript	72996209	72997790	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000185208.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120450.1";
mm10-chrY	HAVANA	exon	72997693	72997790	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000185208.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-201"; exon_number 1; exon_id "ENSMUSE00001321093.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120450.1";
mm10-chrY	HAVANA	exon	72996991	72997033	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000185208.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-201"; exon_number 2; exon_id "ENSMUSE00001335543.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120450.1";
mm10-chrY	HAVANA	exon	72996209	72996296	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000185208.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "processed_transcript"; transcript_name "Gm28969-201"; exon_number 3; exon_id "ENSMUSE00001318710.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120450.1";
mm10-chrY	HAVANA	transcript	72997613	72998227	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190992.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28969-211"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "not_best_in_genome_evidence"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120451.1";
mm10-chrY	HAVANA	exon	72997613	72998227	.	-	.	gene_id "ENSMUSG00000102129.6"; transcript_id "ENSMUST00000190992.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28969"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28969-211"; exon_number 1; exon_id "ENSMUSE00001334563.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "not_best_in_genome_evidence"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046176.1"; havana_transcript "OTTMUST00000120451.1";
mm10-chrY	HAVANA	gene	73034444	73035139	.	-	.	gene_id "ENSMUSG00000100359.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21766"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046185.1";
mm10-chrY	HAVANA	transcript	73034444	73035139	.	-	.	gene_id "ENSMUSG00000100359.1"; transcript_id "ENSMUST00000187962.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21766"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21766-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046185.1"; havana_transcript "OTTMUST00000120472.1";
mm10-chrY	HAVANA	exon	73034444	73035139	.	-	.	gene_id "ENSMUSG00000100359.1"; transcript_id "ENSMUST00000187962.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21766"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21766-201"; exon_number 1; exon_id "ENSMUSE00001333383.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046185.1"; havana_transcript "OTTMUST00000120472.1";
mm10-chrY	HAVANA	gene	73239212	73239904	.	-	.	gene_id "ENSMUSG00000099495.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20800"; level 2; havana_gene "OTTMUSG00000046200.1";
mm10-chrY	HAVANA	transcript	73239212	73239904	.	-	.	gene_id "ENSMUSG00000099495.1"; transcript_id "ENSMUST00000185634.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20800"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20800-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046200.1"; havana_transcript "OTTMUST00000120490.1";
mm10-chrY	HAVANA	exon	73239212	73239904	.	-	.	gene_id "ENSMUSG00000099495.1"; transcript_id "ENSMUST00000185634.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20800"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20800-201"; exon_number 1; exon_id "ENSMUSE00001320394.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046200.1"; havana_transcript "OTTMUST00000120490.1";
mm10-chrY	HAVANA	gene	73313835	73314512	.	-	.	gene_id "ENSMUSG00000101747.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21683"; level 2; havana_gene "OTTMUSG00000046201.1";
mm10-chrY	HAVANA	transcript	73313835	73314512	.	-	.	gene_id "ENSMUSG00000101747.1"; transcript_id "ENSMUST00000186201.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21683"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21683-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046201.1"; havana_transcript "OTTMUST00000120491.1";
mm10-chrY	HAVANA	exon	73313835	73314512	.	-	.	gene_id "ENSMUSG00000101747.1"; transcript_id "ENSMUST00000186201.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21683"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21683-201"; exon_number 1; exon_id "ENSMUSE00001336102.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046201.1"; havana_transcript "OTTMUST00000120491.1";
mm10-chrY	HAVANA	gene	73337918	73348642	.	-	.	gene_id "ENSMUSG00000100379.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046202.1";
mm10-chrY	HAVANA	transcript	73337918	73348642	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187144.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-203"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120492.1";
mm10-chrY	HAVANA	exon	73348507	73348642	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187144.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-203"; exon_number 1; exon_id "ENSMUSE00001322942.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120492.1";
mm10-chrY	HAVANA	exon	73339077	73339210	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187144.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-203"; exon_number 2; exon_id "ENSMUSE00001324987.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120492.1";
mm10-chrY	HAVANA	exon	73337918	73338781	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187144.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-203"; exon_number 3; exon_id "ENSMUSE00001321691.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120492.1";
mm10-chrY	HAVANA	transcript	73338004	73348642	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190010.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-209"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120493.1";
mm10-chrY	HAVANA	exon	73348507	73348642	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190010.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-209"; exon_number 1; exon_id "ENSMUSE00001322942.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120493.1";
mm10-chrY	HAVANA	exon	73346504	73346634	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190010.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-209"; exon_number 2; exon_id "ENSMUSE00001321659.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120493.1";
mm10-chrY	HAVANA	exon	73345802	73346019	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190010.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-209"; exon_number 3; exon_id "ENSMUSE00001333021.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120493.1";
mm10-chrY	HAVANA	exon	73344924	73345107	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190010.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-209"; exon_number 4; exon_id "ENSMUSE00001321155.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120493.1";
mm10-chrY	HAVANA	exon	73339077	73339210	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190010.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-209"; exon_number 5; exon_id "ENSMUSE00001324987.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120493.1";
mm10-chrY	HAVANA	exon	73338004	73338781	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190010.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-209"; exon_number 6; exon_id "ENSMUSE00001332022.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120493.1";
mm10-chrY	HAVANA	transcript	73344339	73348554	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187895.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-204"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120494.1";
mm10-chrY	HAVANA	exon	73348507	73348554	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187895.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-204"; exon_number 1; exon_id "ENSMUSE00001332938.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120494.1";
mm10-chrY	HAVANA	exon	73344924	73345107	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187895.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-204"; exon_number 2; exon_id "ENSMUSE00001321155.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120494.1";
mm10-chrY	HAVANA	exon	73344339	73344408	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187895.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-204"; exon_number 3; exon_id "ENSMUSE00001318558.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120494.1";
mm10-chrY	HAVANA	transcript	73344341	73348560	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190560.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-210"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120495.1";
mm10-chrY	HAVANA	exon	73348507	73348560	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190560.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-210"; exon_number 1; exon_id "ENSMUSE00001333690.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120495.1";
mm10-chrY	HAVANA	exon	73346504	73346634	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190560.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-210"; exon_number 2; exon_id "ENSMUSE00001321659.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120495.1";
mm10-chrY	HAVANA	exon	73345802	73346019	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190560.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-210"; exon_number 3; exon_id "ENSMUSE00001333021.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120495.1";
mm10-chrY	HAVANA	exon	73344924	73345107	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190560.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-210"; exon_number 4; exon_id "ENSMUSE00001321155.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120495.1";
mm10-chrY	HAVANA	exon	73344341	73344408	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190560.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-210"; exon_number 5; exon_id "ENSMUSE00001329524.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120495.1";
mm10-chrY	HAVANA	transcript	73344364	73348585	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190939.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-211"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120496.1";
mm10-chrY	HAVANA	exon	73348507	73348585	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190939.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-211"; exon_number 1; exon_id "ENSMUSE00001324643.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120496.1";
mm10-chrY	HAVANA	exon	73346504	73346634	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190939.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-211"; exon_number 2; exon_id "ENSMUSE00001321659.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120496.1";
mm10-chrY	HAVANA	exon	73344364	73344408	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000190939.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-211"; exon_number 3; exon_id "ENSMUSE00001331014.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120496.1";
mm10-chrY	HAVANA	transcript	73344367	73346601	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000188199.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-207"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120497.1";
mm10-chrY	HAVANA	exon	73346504	73346601	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000188199.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-207"; exon_number 1; exon_id "ENSMUSE00001318456.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120497.1";
mm10-chrY	HAVANA	exon	73344924	73345107	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000188199.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-207"; exon_number 2; exon_id "ENSMUSE00001321155.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120497.1";
mm10-chrY	HAVANA	exon	73344367	73344408	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000188199.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-207"; exon_number 3; exon_id "ENSMUSE00001322787.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120497.1";
mm10-chrY	HAVANA	transcript	73344367	73348585	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000191323.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-212"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120498.1";
mm10-chrY	HAVANA	exon	73348507	73348585	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000191323.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-212"; exon_number 1; exon_id "ENSMUSE00001324643.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120498.1";
mm10-chrY	HAVANA	exon	73344367	73344408	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000191323.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-212"; exon_number 2; exon_id "ENSMUSE00001322787.1"; level 2; transcript_support_level "3"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120498.1";
mm10-chrY	HAVANA	transcript	73344367	73348586	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000188067.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120499.1";
mm10-chrY	HAVANA	exon	73348507	73348586	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000188067.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-206"; exon_number 1; exon_id "ENSMUSE00001325408.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120499.1";
mm10-chrY	HAVANA	exon	73346945	73347181	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000188067.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-206"; exon_number 2; exon_id "ENSMUSE00001318339.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120499.1";
mm10-chrY	HAVANA	exon	73344924	73345107	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000188067.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-206"; exon_number 3; exon_id "ENSMUSE00001321155.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120499.1";
mm10-chrY	HAVANA	exon	73344367	73344408	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000188067.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-206"; exon_number 4; exon_id "ENSMUSE00001322787.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120499.1";
mm10-chrY	HAVANA	transcript	73344963	73348563	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000185199.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120500.1";
mm10-chrY	HAVANA	exon	73348507	73348563	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000185199.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-201"; exon_number 1; exon_id "ENSMUSE00001335088.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120500.1";
mm10-chrY	HAVANA	exon	73344963	73345107	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000185199.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-201"; exon_number 2; exon_id "ENSMUSE00001321077.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120500.1";
mm10-chrY	HAVANA	transcript	73344965	73348542	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187958.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-205"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120501.1";
mm10-chrY	HAVANA	exon	73348507	73348542	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187958.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-205"; exon_number 1; exon_id "ENSMUSE00001332871.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120501.1";
mm10-chrY	HAVANA	exon	73345802	73346019	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187958.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-205"; exon_number 2; exon_id "ENSMUSE00001333021.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120501.1";
mm10-chrY	HAVANA	exon	73344965	73345107	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000187958.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-205"; exon_number 3; exon_id "ENSMUSE00001334319.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120501.1";
mm10-chrY	HAVANA	transcript	73345020	73346601	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000189024.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-208"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120502.1";
mm10-chrY	HAVANA	exon	73346504	73346601	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000189024.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-208"; exon_number 1; exon_id "ENSMUSE00001318456.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120502.1";
mm10-chrY	HAVANA	exon	73345802	73345844	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000189024.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-208"; exon_number 2; exon_id "ENSMUSE00001330377.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120502.1";
mm10-chrY	HAVANA	exon	73345020	73345107	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000189024.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "processed_transcript"; transcript_name "Gm28677-208"; exon_number 3; exon_id "ENSMUSE00001320892.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120502.1";
mm10-chrY	HAVANA	transcript	73346424	73347038	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000186904.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28677-202"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120503.1";
mm10-chrY	HAVANA	exon	73346424	73347038	.	-	.	gene_id "ENSMUSG00000100379.6"; transcript_id "ENSMUST00000186904.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm28677"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm28677-202"; exon_number 1; exon_id "ENSMUSE00001325548.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046202.1"; havana_transcript "OTTMUST00000120503.1";
mm10-chrY	HAVANA	gene	73383284	73383979	.	-	.	gene_id "ENSMUSG00000101715.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21855"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046203.1";
mm10-chrY	HAVANA	transcript	73383284	73383979	.	-	.	gene_id "ENSMUSG00000101715.1"; transcript_id "ENSMUST00000191596.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21855"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21855-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046203.1"; havana_transcript "OTTMUST00000120504.1";
mm10-chrY	HAVANA	exon	73383284	73383979	.	-	.	gene_id "ENSMUSG00000101715.1"; transcript_id "ENSMUST00000191596.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21855"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21855-201"; exon_number 1; exon_id "ENSMUSE00001324938.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046203.1"; havana_transcript "OTTMUST00000120504.1";
mm10-chrY	HAVANA	gene	73425315	73428553	.	+	.	gene_id "ENSMUSG00000101425.1"; gene_type "lincRNA"; gene_name "Gm29255"; level 2; havana_gene "OTTMUSG00000046221.1";
mm10-chrY	HAVANA	transcript	73425315	73428553	.	+	.	gene_id "ENSMUSG00000101425.1"; transcript_id "ENSMUST00000185248.1"; gene_type "lincRNA"; gene_name "Gm29255"; transcript_type "lincRNA"; transcript_name "Gm29255-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046221.1"; havana_transcript "OTTMUST00000120534.1";
mm10-chrY	HAVANA	exon	73425315	73425953	.	+	.	gene_id "ENSMUSG00000101425.1"; transcript_id "ENSMUST00000185248.1"; gene_type "lincRNA"; gene_name "Gm29255"; transcript_type "lincRNA"; transcript_name "Gm29255-201"; exon_number 1; exon_id "ENSMUSE00001334094.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046221.1"; havana_transcript "OTTMUST00000120534.1";
mm10-chrY	HAVANA	exon	73426439	73426624	.	+	.	gene_id "ENSMUSG00000101425.1"; transcript_id "ENSMUST00000185248.1"; gene_type "lincRNA"; gene_name "Gm29255"; transcript_type "lincRNA"; transcript_name "Gm29255-201"; exon_number 2; exon_id "ENSMUSE00001328033.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046221.1"; havana_transcript "OTTMUST00000120534.1";
mm10-chrY	HAVANA	exon	73427354	73427537	.	+	.	gene_id "ENSMUSG00000101425.1"; transcript_id "ENSMUST00000185248.1"; gene_type "lincRNA"; gene_name "Gm29255"; transcript_type "lincRNA"; transcript_name "Gm29255-201"; exon_number 3; exon_id "ENSMUSE00001334315.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046221.1"; havana_transcript "OTTMUST00000120534.1";
mm10-chrY	HAVANA	exon	73428065	73428553	.	+	.	gene_id "ENSMUSG00000101425.1"; transcript_id "ENSMUST00000185248.1"; gene_type "lincRNA"; gene_name "Gm29255"; transcript_type "lincRNA"; transcript_name "Gm29255-201"; exon_number 4; exon_id "ENSMUSE00001318939.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046221.1"; havana_transcript "OTTMUST00000120534.1";
mm10-chrY	HAVANA	transcript	73425767	73428133	.	+	.	gene_id "ENSMUSG00000101425.1"; transcript_id "ENSMUST00000187205.1"; gene_type "lincRNA"; gene_name "Gm29255"; transcript_type "lincRNA"; transcript_name "Gm29255-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046221.1"; havana_transcript "OTTMUST00000120535.1";
mm10-chrY	HAVANA	exon	73425767	73425953	.	+	.	gene_id "ENSMUSG00000101425.1"; transcript_id "ENSMUST00000187205.1"; gene_type "lincRNA"; gene_name "Gm29255"; transcript_type "lincRNA"; transcript_name "Gm29255-202"; exon_number 1; exon_id "ENSMUSE00001334547.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046221.1"; havana_transcript "OTTMUST00000120535.1";
mm10-chrY	HAVANA	exon	73426443	73426624	.	+	.	gene_id "ENSMUSG00000101425.1"; transcript_id "ENSMUST00000187205.1"; gene_type "lincRNA"; gene_name "Gm29255"; transcript_type "lincRNA"; transcript_name "Gm29255-202"; exon_number 2; exon_id "ENSMUSE00001321727.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046221.1"; havana_transcript "OTTMUST00000120535.1";
mm10-chrY	HAVANA	exon	73428065	73428133	.	+	.	gene_id "ENSMUSG00000101425.1"; transcript_id "ENSMUST00000187205.1"; gene_type "lincRNA"; gene_name "Gm29255"; transcript_type "lincRNA"; transcript_name "Gm29255-202"; exon_number 3; exon_id "ENSMUSE00001332407.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046221.1"; havana_transcript "OTTMUST00000120535.1";
mm10-chrY	HAVANA	gene	73535535	73536230	.	-	.	gene_id "ENSMUSG00000100698.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20902"; level 2; havana_gene "OTTMUSG00000046204.1";
mm10-chrY	HAVANA	transcript	73535535	73536230	.	-	.	gene_id "ENSMUSG00000100698.1"; transcript_id "ENSMUST00000185643.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20902"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20902-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046204.1"; havana_transcript "OTTMUST00000120505.1";
mm10-chrY	HAVANA	exon	73535535	73536230	.	-	.	gene_id "ENSMUSG00000100698.1"; transcript_id "ENSMUST00000185643.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20902"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20902-201"; exon_number 1; exon_id "ENSMUSE00001320909.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046204.1"; havana_transcript "OTTMUST00000120505.1";
mm10-chrY	HAVANA	gene	73606862	73607557	.	-	.	gene_id "ENSMUSG00000099547.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28678"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046205.1";
mm10-chrY	HAVANA	transcript	73606862	73607557	.	-	.	gene_id "ENSMUSG00000099547.1"; transcript_id "ENSMUST00000191593.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28678"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28678-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046205.1"; havana_transcript "OTTMUST00000120506.1";
mm10-chrY	HAVANA	exon	73606862	73607557	.	-	.	gene_id "ENSMUSG00000099547.1"; transcript_id "ENSMUST00000191593.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28678"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28678-201"; exon_number 1; exon_id "ENSMUSE00001322836.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046205.1"; havana_transcript "OTTMUST00000120506.1";
mm10-chrY	HAVANA	gene	73669315	73695486	.	+	.	gene_id "ENSMUSG00000099782.1"; gene_type "protein_coding"; gene_name "Gm20903"; level 2; havana_gene "OTTMUSG00000046206.1";
mm10-chrY	HAVANA	transcript	73669315	73695486	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	exon	73669315	73669358	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 1; exon_id "ENSMUSE00001335740.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	exon	73670720	73670851	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 2; exon_id "ENSMUSE00001334926.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	CDS	73670734	73670851	.	+	0	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 2; exon_id "ENSMUSE00001334926.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	start_codon	73670734	73670736	.	+	0	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 2; exon_id "ENSMUSE00001334926.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	exon	73676187	73676253	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 3; exon_id "ENSMUSE00001327230.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	CDS	73676187	73676253	.	+	2	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 3; exon_id "ENSMUSE00001327230.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	exon	73676909	73676943	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 4; exon_id "ENSMUSE00001326625.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	CDS	73676909	73676943	.	+	1	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 4; exon_id "ENSMUSE00001326625.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	exon	73683955	73684021	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 5; exon_id "ENSMUSE00001323146.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	CDS	73683955	73684021	.	+	2	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 5; exon_id "ENSMUSE00001323146.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	exon	73684598	73684632	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 6; exon_id "ENSMUSE00001326083.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	CDS	73684598	73684632	.	+	1	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 6; exon_id "ENSMUSE00001326083.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	exon	73691780	73691897	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 7; exon_id "ENSMUSE00001323537.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	CDS	73691780	73691897	.	+	2	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 7; exon_id "ENSMUSE00001323537.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	exon	73692664	73692763	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 8; exon_id "ENSMUSE00001319999.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	CDS	73692664	73692763	.	+	1	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 8; exon_id "ENSMUSE00001319999.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	exon	73694803	73694901	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 9; exon_id "ENSMUSE00001334056.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	CDS	73694803	73694901	.	+	0	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 9; exon_id "ENSMUSE00001334056.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	exon	73695261	73695486	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 10; exon_id "ENSMUSE00001319787.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	CDS	73695261	73695287	.	+	0	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 10; exon_id "ENSMUSE00001319787.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	stop_codon	73695288	73695290	.	+	0	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 10; exon_id "ENSMUSE00001319787.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	UTR	73669315	73669358	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 1; exon_id "ENSMUSE00001335740.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	UTR	73670720	73670733	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 2; exon_id "ENSMUSE00001334926.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	UTR	73695288	73695486	.	+	.	gene_id "ENSMUSG00000099782.1"; transcript_id "ENSMUST00000189346.1"; gene_type "protein_coding"; gene_name "Gm20903"; transcript_type "protein_coding"; transcript_name "Gm20903-201"; exon_number 10; exon_id "ENSMUSE00001319787.1"; level 2; protein_id "ENSMUSP00000141119.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046206.1"; havana_transcript "OTTMUST00000120507.1";
mm10-chrY	HAVANA	gene	73760573	73761268	.	-	.	gene_id "ENSMUSG00000101038.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28272"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046222.1";
mm10-chrY	HAVANA	transcript	73760573	73761268	.	-	.	gene_id "ENSMUSG00000101038.1"; transcript_id "ENSMUST00000189512.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28272"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28272-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046222.1"; havana_transcript "OTTMUST00000120536.1";
mm10-chrY	HAVANA	exon	73760573	73761268	.	-	.	gene_id "ENSMUSG00000101038.1"; transcript_id "ENSMUST00000189512.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28272"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28272-201"; exon_number 1; exon_id "ENSMUSE00001325005.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046222.1"; havana_transcript "OTTMUST00000120536.1";
mm10-chrY	HAVANA	gene	73789144	73789455	.	-	.	gene_id "ENSMUSG00000100604.1"; gene_type "processed_pseudogene"; gene_name "Gm29256"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046223.1";
mm10-chrY	HAVANA	transcript	73789144	73789455	.	-	.	gene_id "ENSMUSG00000100604.1"; transcript_id "ENSMUST00000189094.1"; gene_type "processed_pseudogene"; gene_name "Gm29256"; transcript_type "processed_pseudogene"; transcript_name "Gm29256-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046223.1"; havana_transcript "OTTMUST00000120537.1";
mm10-chrY	HAVANA	exon	73789144	73789455	.	-	.	gene_id "ENSMUSG00000100604.1"; transcript_id "ENSMUST00000189094.1"; gene_type "processed_pseudogene"; gene_name "Gm29256"; transcript_type "processed_pseudogene"; transcript_name "Gm29256-201"; exon_number 1; exon_id "ENSMUSE00001335032.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046223.1"; havana_transcript "OTTMUST00000120537.1";
mm10-chrY	HAVANA	gene	73826159	73829395	.	+	.	gene_id "ENSMUSG00000099554.1"; gene_type "lincRNA"; gene_name "Gm28259"; level 2; havana_gene "OTTMUSG00000046224.1";
mm10-chrY	HAVANA	transcript	73826159	73829395	.	+	.	gene_id "ENSMUSG00000099554.1"; transcript_id "ENSMUST00000190319.1"; gene_type "lincRNA"; gene_name "Gm28259"; transcript_type "lincRNA"; transcript_name "Gm28259-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046224.1"; havana_transcript "OTTMUST00000120538.1";
mm10-chrY	HAVANA	exon	73826159	73826796	.	+	.	gene_id "ENSMUSG00000099554.1"; transcript_id "ENSMUST00000190319.1"; gene_type "lincRNA"; gene_name "Gm28259"; transcript_type "lincRNA"; transcript_name "Gm28259-201"; exon_number 1; exon_id "ENSMUSE00001332638.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046224.1"; havana_transcript "OTTMUST00000120538.1";
mm10-chrY	HAVANA	exon	73827282	73827467	.	+	.	gene_id "ENSMUSG00000099554.1"; transcript_id "ENSMUST00000190319.1"; gene_type "lincRNA"; gene_name "Gm28259"; transcript_type "lincRNA"; transcript_name "Gm28259-201"; exon_number 2; exon_id "ENSMUSE00001334152.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046224.1"; havana_transcript "OTTMUST00000120538.1";
mm10-chrY	HAVANA	exon	73828197	73828380	.	+	.	gene_id "ENSMUSG00000099554.1"; transcript_id "ENSMUST00000190319.1"; gene_type "lincRNA"; gene_name "Gm28259"; transcript_type "lincRNA"; transcript_name "Gm28259-201"; exon_number 3; exon_id "ENSMUSE00001329090.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046224.1"; havana_transcript "OTTMUST00000120538.1";
mm10-chrY	HAVANA	exon	73828907	73829395	.	+	.	gene_id "ENSMUSG00000099554.1"; transcript_id "ENSMUST00000190319.1"; gene_type "lincRNA"; gene_name "Gm28259"; transcript_type "lincRNA"; transcript_name "Gm28259-201"; exon_number 4; exon_id "ENSMUSE00001327286.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046224.1"; havana_transcript "OTTMUST00000120538.1";
mm10-chrY	HAVANA	transcript	73826611	73828971	.	+	.	gene_id "ENSMUSG00000099554.1"; transcript_id "ENSMUST00000190815.1"; gene_type "lincRNA"; gene_name "Gm28259"; transcript_type "lincRNA"; transcript_name "Gm28259-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046224.1"; havana_transcript "OTTMUST00000120539.1";
mm10-chrY	HAVANA	exon	73826611	73826796	.	+	.	gene_id "ENSMUSG00000099554.1"; transcript_id "ENSMUST00000190815.1"; gene_type "lincRNA"; gene_name "Gm28259"; transcript_type "lincRNA"; transcript_name "Gm28259-202"; exon_number 1; exon_id "ENSMUSE00001328655.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046224.1"; havana_transcript "OTTMUST00000120539.1";
mm10-chrY	HAVANA	exon	73827286	73827467	.	+	.	gene_id "ENSMUSG00000099554.1"; transcript_id "ENSMUST00000190815.1"; gene_type "lincRNA"; gene_name "Gm28259"; transcript_type "lincRNA"; transcript_name "Gm28259-202"; exon_number 2; exon_id "ENSMUSE00001329611.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046224.1"; havana_transcript "OTTMUST00000120539.1";
mm10-chrY	HAVANA	exon	73828907	73828971	.	+	.	gene_id "ENSMUSG00000099554.1"; transcript_id "ENSMUST00000190815.1"; gene_type "lincRNA"; gene_name "Gm28259"; transcript_type "lincRNA"; transcript_name "Gm28259-202"; exon_number 3; exon_id "ENSMUSE00001322363.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046224.1"; havana_transcript "OTTMUST00000120539.1";
mm10-chrY	HAVANA	gene	73936805	73937499	.	-	.	gene_id "ENSMUSG00000101757.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28273"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046225.1";
mm10-chrY	HAVANA	transcript	73936805	73937499	.	-	.	gene_id "ENSMUSG00000101757.1"; transcript_id "ENSMUST00000185811.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28273"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28273-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046225.1"; havana_transcript "OTTMUST00000120540.1";
mm10-chrY	HAVANA	exon	73936805	73937499	.	-	.	gene_id "ENSMUSG00000101757.1"; transcript_id "ENSMUST00000185811.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28273"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28273-201"; exon_number 1; exon_id "ENSMUSE00001335763.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046225.1"; havana_transcript "OTTMUST00000120540.1";
mm10-chrY	HAVANA	gene	74011465	74012158	.	-	.	gene_id "ENSMUSG00000100179.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21715"; level 2; havana_gene "OTTMUSG00000046227.2";
mm10-chrY	HAVANA	transcript	74011465	74012158	.	-	.	gene_id "ENSMUSG00000100179.1"; transcript_id "ENSMUST00000191056.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21715"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21715-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046227.2"; havana_transcript "OTTMUST00000120544.2";
mm10-chrY	HAVANA	exon	74011465	74012158	.	-	.	gene_id "ENSMUSG00000100179.1"; transcript_id "ENSMUST00000191056.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21715"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21715-201"; exon_number 1; exon_id "ENSMUSE00001328464.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046227.2"; havana_transcript "OTTMUST00000120544.2";
mm10-chrY	HAVANA	gene	74032832	74043464	.	-	.	gene_id "ENSMUSG00000099685.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046231.1";
mm10-chrY	HAVANA	transcript	74032832	74043464	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000187759.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-206"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120549.1";
mm10-chrY	HAVANA	exon	74043329	74043464	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000187759.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-206"; exon_number 1; exon_id "ENSMUSE00001332351.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120549.1";
mm10-chrY	HAVANA	exon	74041330	74041459	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000187759.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-206"; exon_number 2; exon_id "ENSMUSE00001331410.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120549.1";
mm10-chrY	HAVANA	exon	74040628	74040845	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000187759.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-206"; exon_number 3; exon_id "ENSMUSE00001329721.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120549.1";
mm10-chrY	HAVANA	exon	74039749	74039932	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000187759.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-206"; exon_number 4; exon_id "ENSMUSE00001321447.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120549.1";
mm10-chrY	HAVANA	exon	74033924	74034057	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000187759.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-206"; exon_number 5; exon_id "ENSMUSE00001336029.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120549.1";
mm10-chrY	HAVANA	exon	74032832	74033629	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000187759.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-206"; exon_number 6; exon_id "ENSMUSE00001325524.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120549.1";
mm10-chrY	HAVANA	transcript	74032867	74043464	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000186558.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-203"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120550.1";
mm10-chrY	HAVANA	exon	74043329	74043464	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000186558.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-203"; exon_number 1; exon_id "ENSMUSE00001332351.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120550.1";
mm10-chrY	HAVANA	exon	74033924	74034057	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000186558.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-203"; exon_number 2; exon_id "ENSMUSE00001336029.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120550.1";
mm10-chrY	HAVANA	exon	74032867	74033629	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000186558.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-203"; exon_number 3; exon_id "ENSMUSE00001328927.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120550.1";
mm10-chrY	HAVANA	transcript	74038742	74039931	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000186664.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-204"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120551.1";
mm10-chrY	HAVANA	exon	74039749	74039931	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000186664.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-204"; exon_number 1; exon_id "ENSMUSE00001335281.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120551.1";
mm10-chrY	HAVANA	exon	74038742	74039233	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000186664.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-204"; exon_number 2; exon_id "ENSMUSE00001322041.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120551.1";
mm10-chrY	HAVANA	transcript	74039164	74043369	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000191477.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-212"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120552.1";
mm10-chrY	HAVANA	exon	74043329	74043369	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000191477.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-212"; exon_number 1; exon_id "ENSMUSE00001330546.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120552.1";
mm10-chrY	HAVANA	exon	74039749	74039932	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000191477.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-212"; exon_number 2; exon_id "ENSMUSE00001321447.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120552.1";
mm10-chrY	HAVANA	exon	74039164	74039233	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000191477.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-212"; exon_number 3; exon_id "ENSMUSE00001323109.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120552.1";
mm10-chrY	HAVANA	transcript	74039164	74043378	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000186926.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-205"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120553.1";
mm10-chrY	HAVANA	exon	74043329	74043378	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000186926.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-205"; exon_number 1; exon_id "ENSMUSE00001324208.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120553.1";
mm10-chrY	HAVANA	exon	74039164	74039233	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000186926.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-205"; exon_number 2; exon_id "ENSMUSE00001323109.1"; level 2; transcript_support_level "3"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120553.1";
mm10-chrY	HAVANA	transcript	74039164	74043408	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000185868.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120554.1";
mm10-chrY	HAVANA	exon	74043329	74043408	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000185868.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-202"; exon_number 1; exon_id "ENSMUSE00001327957.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120554.1";
mm10-chrY	HAVANA	exon	74041770	74042006	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000185868.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-202"; exon_number 2; exon_id "ENSMUSE00001322168.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120554.1";
mm10-chrY	HAVANA	exon	74039749	74039932	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000185868.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-202"; exon_number 3; exon_id "ENSMUSE00001321447.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120554.1";
mm10-chrY	HAVANA	exon	74039164	74039233	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000185868.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-202"; exon_number 4; exon_id "ENSMUSE00001323109.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120554.1";
mm10-chrY	HAVANA	transcript	74039166	74043382	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000188238.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-207"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120555.1";
mm10-chrY	HAVANA	exon	74043329	74043382	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000188238.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-207"; exon_number 1; exon_id "ENSMUSE00001330450.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120555.1";
mm10-chrY	HAVANA	exon	74041330	74041459	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000188238.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-207"; exon_number 2; exon_id "ENSMUSE00001331410.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120555.1";
mm10-chrY	HAVANA	exon	74040628	74040845	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000188238.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-207"; exon_number 3; exon_id "ENSMUSE00001329721.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120555.1";
mm10-chrY	HAVANA	exon	74039749	74039932	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000188238.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-207"; exon_number 4; exon_id "ENSMUSE00001321447.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120555.1";
mm10-chrY	HAVANA	exon	74039166	74039233	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000188238.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-207"; exon_number 5; exon_id "ENSMUSE00001326817.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120555.1";
mm10-chrY	HAVANA	transcript	74039189	74041427	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000189305.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-208"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120556.1";
mm10-chrY	HAVANA	exon	74041330	74041427	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000189305.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-208"; exon_number 1; exon_id "ENSMUSE00001330904.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120556.1";
mm10-chrY	HAVANA	exon	74039749	74039932	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000189305.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-208"; exon_number 2; exon_id "ENSMUSE00001321447.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120556.1";
mm10-chrY	HAVANA	exon	74039189	74039233	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000189305.6"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-208"; exon_number 3; exon_id "ENSMUSE00001322542.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120556.1";
mm10-chrY	HAVANA	transcript	74039189	74043407	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000191244.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-211"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120557.1";
mm10-chrY	HAVANA	exon	74043329	74043407	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000191244.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-211"; exon_number 1; exon_id "ENSMUSE00001320307.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120557.1";
mm10-chrY	HAVANA	exon	74041330	74041459	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000191244.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-211"; exon_number 2; exon_id "ENSMUSE00001331410.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120557.1";
mm10-chrY	HAVANA	exon	74039189	74039233	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000191244.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-211"; exon_number 3; exon_id "ENSMUSE00001322542.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120557.1";
mm10-chrY	HAVANA	transcript	74039790	74043364	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000190513.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-210"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120558.1";
mm10-chrY	HAVANA	exon	74043329	74043364	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000190513.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-210"; exon_number 1; exon_id "ENSMUSE00001330664.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120558.1";
mm10-chrY	HAVANA	exon	74040628	74040845	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000190513.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-210"; exon_number 2; exon_id "ENSMUSE00001329721.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120558.1";
mm10-chrY	HAVANA	exon	74039790	74039932	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000190513.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-210"; exon_number 3; exon_id "ENSMUSE00001325306.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120558.1";
mm10-chrY	HAVANA	transcript	74039845	74041427	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000190423.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-209"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120559.1";
mm10-chrY	HAVANA	exon	74041330	74041427	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000190423.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-209"; exon_number 1; exon_id "ENSMUSE00001330904.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120559.1";
mm10-chrY	HAVANA	exon	74040628	74040670	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000190423.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-209"; exon_number 2; exon_id "ENSMUSE00001325386.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120559.1";
mm10-chrY	HAVANA	exon	74039845	74039932	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000190423.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "processed_transcript"; transcript_name "Gm29617-209"; exon_number 3; exon_id "ENSMUSE00001331900.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120559.1";
mm10-chrY	HAVANA	transcript	74041252	74041861	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000185730.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29617-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "not_best_in_genome_evidence"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120560.1";
mm10-chrY	HAVANA	exon	74041252	74041861	.	-	.	gene_id "ENSMUSG00000099685.6"; transcript_id "ENSMUST00000185730.1"; gene_type "transcribed_unprocessed_pseudogene"; gene_name "Gm29617"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_name "Gm29617-201"; exon_number 1; exon_id "ENSMUSE00001330824.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; ont "PGO:0000019"; tag "not_best_in_genome_evidence"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046231.1"; havana_transcript "OTTMUST00000120560.1";
mm10-chrY	HAVANA	gene	74078103	74078799	.	-	.	gene_id "ENSMUSG00000100251.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29615"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046232.1";
mm10-chrY	HAVANA	transcript	74078103	74078799	.	-	.	gene_id "ENSMUSG00000100251.1"; transcript_id "ENSMUST00000185371.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29615"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29615-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046232.1"; havana_transcript "OTTMUST00000120561.1";
mm10-chrY	HAVANA	exon	74078103	74078799	.	-	.	gene_id "ENSMUSG00000100251.1"; transcript_id "ENSMUST00000185371.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29615"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29615-201"; exon_number 1; exon_id "ENSMUSE00001334054.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046232.1"; havana_transcript "OTTMUST00000120561.1";
mm10-chrY	HAVANA	gene	74118552	74121790	.	+	.	gene_id "ENSMUSG00000101774.6"; gene_type "lincRNA"; gene_name "Gm29616"; level 2; havana_gene "OTTMUSG00000046233.1";
mm10-chrY	HAVANA	transcript	74118552	74121790	.	+	.	gene_id "ENSMUSG00000101774.6"; transcript_id "ENSMUST00000188777.6"; gene_type "lincRNA"; gene_name "Gm29616"; transcript_type "lincRNA"; transcript_name "Gm29616-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046233.1"; havana_transcript "OTTMUST00000120562.1";
mm10-chrY	HAVANA	exon	74118552	74119191	.	+	.	gene_id "ENSMUSG00000101774.6"; transcript_id "ENSMUST00000188777.6"; gene_type "lincRNA"; gene_name "Gm29616"; transcript_type "lincRNA"; transcript_name "Gm29616-201"; exon_number 1; exon_id "ENSMUSE00001323130.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046233.1"; havana_transcript "OTTMUST00000120562.1";
mm10-chrY	HAVANA	exon	74119677	74119862	.	+	.	gene_id "ENSMUSG00000101774.6"; transcript_id "ENSMUST00000188777.6"; gene_type "lincRNA"; gene_name "Gm29616"; transcript_type "lincRNA"; transcript_name "Gm29616-201"; exon_number 2; exon_id "ENSMUSE00001335241.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046233.1"; havana_transcript "OTTMUST00000120562.1";
mm10-chrY	HAVANA	exon	74120592	74120775	.	+	.	gene_id "ENSMUSG00000101774.6"; transcript_id "ENSMUST00000188777.6"; gene_type "lincRNA"; gene_name "Gm29616"; transcript_type "lincRNA"; transcript_name "Gm29616-201"; exon_number 3; exon_id "ENSMUSE00001333643.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046233.1"; havana_transcript "OTTMUST00000120562.1";
mm10-chrY	HAVANA	exon	74121302	74121790	.	+	.	gene_id "ENSMUSG00000101774.6"; transcript_id "ENSMUST00000188777.6"; gene_type "lincRNA"; gene_name "Gm29616"; transcript_type "lincRNA"; transcript_name "Gm29616-201"; exon_number 4; exon_id "ENSMUSE00001334469.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046233.1"; havana_transcript "OTTMUST00000120562.1";
mm10-chrY	HAVANA	transcript	74119006	74121370	.	+	.	gene_id "ENSMUSG00000101774.6"; transcript_id "ENSMUST00000190614.1"; gene_type "lincRNA"; gene_name "Gm29616"; transcript_type "lincRNA"; transcript_name "Gm29616-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046233.1"; havana_transcript "OTTMUST00000120563.1";
mm10-chrY	HAVANA	exon	74119006	74119191	.	+	.	gene_id "ENSMUSG00000101774.6"; transcript_id "ENSMUST00000190614.1"; gene_type "lincRNA"; gene_name "Gm29616"; transcript_type "lincRNA"; transcript_name "Gm29616-202"; exon_number 1; exon_id "ENSMUSE00001325947.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046233.1"; havana_transcript "OTTMUST00000120563.1";
mm10-chrY	HAVANA	exon	74119681	74119862	.	+	.	gene_id "ENSMUSG00000101774.6"; transcript_id "ENSMUST00000190614.1"; gene_type "lincRNA"; gene_name "Gm29616"; transcript_type "lincRNA"; transcript_name "Gm29616-202"; exon_number 2; exon_id "ENSMUSE00001320114.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046233.1"; havana_transcript "OTTMUST00000120563.1";
mm10-chrY	HAVANA	exon	74120592	74120775	.	+	.	gene_id "ENSMUSG00000101774.6"; transcript_id "ENSMUST00000190614.1"; gene_type "lincRNA"; gene_name "Gm29616"; transcript_type "lincRNA"; transcript_name "Gm29616-202"; exon_number 3; exon_id "ENSMUSE00001333643.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046233.1"; havana_transcript "OTTMUST00000120563.1";
mm10-chrY	HAVANA	exon	74121302	74121370	.	+	.	gene_id "ENSMUSG00000101774.6"; transcript_id "ENSMUST00000190614.1"; gene_type "lincRNA"; gene_name "Gm29616"; transcript_type "lincRNA"; transcript_name "Gm29616-202"; exon_number 4; exon_id "ENSMUSE00001321602.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046233.1"; havana_transcript "OTTMUST00000120563.1";
mm10-chrY	HAVANA	gene	74225845	74226538	.	-	.	gene_id "ENSMUSG00000099883.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21784"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046291.2";
mm10-chrY	HAVANA	transcript	74225845	74226538	.	-	.	gene_id "ENSMUSG00000099883.1"; transcript_id "ENSMUST00000186639.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21784"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21784-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046291.2"; havana_transcript "OTTMUST00000120684.2";
mm10-chrY	HAVANA	exon	74225845	74226538	.	-	.	gene_id "ENSMUSG00000099883.1"; transcript_id "ENSMUST00000186639.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21784"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21784-201"; exon_number 1; exon_id "ENSMUSE00001326786.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046291.2"; havana_transcript "OTTMUST00000120684.2";
mm10-chrY	HAVANA	gene	74300200	74300895	.	-	.	gene_id "ENSMUSG00000100363.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20805"; level 2; havana_gene "OTTMUSG00000046236.1";
mm10-chrY	HAVANA	transcript	74300200	74300895	.	-	.	gene_id "ENSMUSG00000100363.1"; transcript_id "ENSMUST00000186299.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20805"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20805-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046236.1"; havana_transcript "OTTMUST00000120567.1";
mm10-chrY	HAVANA	exon	74300200	74300895	.	-	.	gene_id "ENSMUSG00000100363.1"; transcript_id "ENSMUST00000186299.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20805"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20805-201"; exon_number 1; exon_id "ENSMUSE00001319564.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046236.1"; havana_transcript "OTTMUST00000120567.1";
mm10-chrY	HAVANA	gene	74329960	74330574	.	-	.	gene_id "ENSMUSG00000100276.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29618"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046237.1";
mm10-chrY	HAVANA	transcript	74329960	74330574	.	-	.	gene_id "ENSMUSG00000100276.1"; transcript_id "ENSMUST00000191423.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29618"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29618-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046237.1"; havana_transcript "OTTMUST00000120568.1";
mm10-chrY	HAVANA	exon	74329960	74330574	.	-	.	gene_id "ENSMUSG00000100276.1"; transcript_id "ENSMUST00000191423.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29618"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29618-201"; exon_number 1; exon_id "ENSMUSE00001324717.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046237.1"; havana_transcript "OTTMUST00000120568.1";
mm10-chrY	HAVANA	gene	74366787	74367482	.	-	.	gene_id "ENSMUSG00000101318.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29109"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046262.1";
mm10-chrY	HAVANA	transcript	74366787	74367482	.	-	.	gene_id "ENSMUSG00000101318.1"; transcript_id "ENSMUST00000185895.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29109"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29109-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046262.1"; havana_transcript "OTTMUST00000120608.1";
mm10-chrY	HAVANA	exon	74366787	74367482	.	-	.	gene_id "ENSMUSG00000101318.1"; transcript_id "ENSMUST00000185895.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29109"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29109-201"; exon_number 1; exon_id "ENSMUSE00001334924.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046262.1"; havana_transcript "OTTMUST00000120608.1";
mm10-chrY	HAVANA	gene	74408375	74411613	.	+	.	gene_id "ENSMUSG00000100805.1"; gene_type "lincRNA"; gene_name "Gm29108"; level 2; havana_gene "OTTMUSG00000046263.1";
mm10-chrY	HAVANA	transcript	74408375	74411613	.	+	.	gene_id "ENSMUSG00000100805.1"; transcript_id "ENSMUST00000186020.1"; gene_type "lincRNA"; gene_name "Gm29108"; transcript_type "lincRNA"; transcript_name "Gm29108-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046263.1"; havana_transcript "OTTMUST00000120609.1";
mm10-chrY	HAVANA	exon	74408375	74409013	.	+	.	gene_id "ENSMUSG00000100805.1"; transcript_id "ENSMUST00000186020.1"; gene_type "lincRNA"; gene_name "Gm29108"; transcript_type "lincRNA"; transcript_name "Gm29108-201"; exon_number 1; exon_id "ENSMUSE00001325141.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046263.1"; havana_transcript "OTTMUST00000120609.1";
mm10-chrY	HAVANA	exon	74409499	74409684	.	+	.	gene_id "ENSMUSG00000100805.1"; transcript_id "ENSMUST00000186020.1"; gene_type "lincRNA"; gene_name "Gm29108"; transcript_type "lincRNA"; transcript_name "Gm29108-201"; exon_number 2; exon_id "ENSMUSE00001320729.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046263.1"; havana_transcript "OTTMUST00000120609.1";
mm10-chrY	HAVANA	exon	74410414	74410597	.	+	.	gene_id "ENSMUSG00000100805.1"; transcript_id "ENSMUST00000186020.1"; gene_type "lincRNA"; gene_name "Gm29108"; transcript_type "lincRNA"; transcript_name "Gm29108-201"; exon_number 3; exon_id "ENSMUSE00001321099.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046263.1"; havana_transcript "OTTMUST00000120609.1";
mm10-chrY	HAVANA	exon	74411125	74411613	.	+	.	gene_id "ENSMUSG00000100805.1"; transcript_id "ENSMUST00000186020.1"; gene_type "lincRNA"; gene_name "Gm29108"; transcript_type "lincRNA"; transcript_name "Gm29108-201"; exon_number 4; exon_id "ENSMUSE00001325829.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046263.1"; havana_transcript "OTTMUST00000120609.1";
mm10-chrY	HAVANA	transcript	74408827	74411193	.	+	.	gene_id "ENSMUSG00000100805.1"; transcript_id "ENSMUST00000187930.1"; gene_type "lincRNA"; gene_name "Gm29108"; transcript_type "lincRNA"; transcript_name "Gm29108-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046263.1"; havana_transcript "OTTMUST00000120610.1";
mm10-chrY	HAVANA	exon	74408827	74409013	.	+	.	gene_id "ENSMUSG00000100805.1"; transcript_id "ENSMUST00000187930.1"; gene_type "lincRNA"; gene_name "Gm29108"; transcript_type "lincRNA"; transcript_name "Gm29108-202"; exon_number 1; exon_id "ENSMUSE00001323968.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046263.1"; havana_transcript "OTTMUST00000120610.1";
mm10-chrY	HAVANA	exon	74409503	74409684	.	+	.	gene_id "ENSMUSG00000100805.1"; transcript_id "ENSMUST00000187930.1"; gene_type "lincRNA"; gene_name "Gm29108"; transcript_type "lincRNA"; transcript_name "Gm29108-202"; exon_number 2; exon_id "ENSMUSE00001334118.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046263.1"; havana_transcript "OTTMUST00000120610.1";
mm10-chrY	HAVANA	exon	74411125	74411193	.	+	.	gene_id "ENSMUSG00000100805.1"; transcript_id "ENSMUST00000187930.1"; gene_type "lincRNA"; gene_name "Gm29108"; transcript_type "lincRNA"; transcript_name "Gm29108-202"; exon_number 3; exon_id "ENSMUSE00001320449.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046263.1"; havana_transcript "OTTMUST00000120610.1";
mm10-chrY	HAVANA	gene	74470531	74496958	.	+	.	gene_id "ENSMUSG00000101528.1"; gene_type "protein_coding"; gene_name "Gm29110"; level 2; havana_gene "OTTMUSG00000046268.1";
mm10-chrY	HAVANA	transcript	74470531	74496958	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	exon	74470531	74470574	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 1; exon_id "ENSMUSE00001323348.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	exon	74471938	74472069	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 2; exon_id "ENSMUSE00001329587.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	CDS	74471952	74472069	.	+	0	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 2; exon_id "ENSMUSE00001329587.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	start_codon	74471952	74471954	.	+	0	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 2; exon_id "ENSMUSE00001329587.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	exon	74477376	74477442	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 3; exon_id "ENSMUSE00001336013.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	CDS	74477376	74477442	.	+	2	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 3; exon_id "ENSMUSE00001336013.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	exon	74478136	74478170	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 4; exon_id "ENSMUSE00001318703.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	CDS	74478136	74478170	.	+	1	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 4; exon_id "ENSMUSE00001318703.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	exon	74485224	74485290	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 5; exon_id "ENSMUSE00001321995.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	CDS	74485224	74485290	.	+	2	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 5; exon_id "ENSMUSE00001321995.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	exon	74485867	74485901	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 6; exon_id "ENSMUSE00001334024.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	CDS	74485867	74485901	.	+	1	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 6; exon_id "ENSMUSE00001334024.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	exon	74493230	74493347	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 7; exon_id "ENSMUSE00001335712.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	CDS	74493230	74493347	.	+	2	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 7; exon_id "ENSMUSE00001335712.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	exon	74494130	74494229	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 8; exon_id "ENSMUSE00001329712.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	CDS	74494130	74494229	.	+	1	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 8; exon_id "ENSMUSE00001329712.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	exon	74496276	74496374	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 9; exon_id "ENSMUSE00001322194.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	CDS	74496276	74496374	.	+	0	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 9; exon_id "ENSMUSE00001322194.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	exon	74496734	74496958	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 10; exon_id "ENSMUSE00001325331.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	CDS	74496734	74496760	.	+	0	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 10; exon_id "ENSMUSE00001325331.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	stop_codon	74496761	74496763	.	+	0	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 10; exon_id "ENSMUSE00001325331.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	UTR	74470531	74470574	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 1; exon_id "ENSMUSE00001323348.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	UTR	74471938	74471951	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 2; exon_id "ENSMUSE00001329587.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	UTR	74496761	74496958	.	+	.	gene_id "ENSMUSG00000101528.1"; transcript_id "ENSMUST00000189924.1"; gene_type "protein_coding"; gene_name "Gm29110"; transcript_type "protein_coding"; transcript_name "Gm29110-201"; exon_number 10; exon_id "ENSMUSE00001325331.1"; level 2; protein_id "ENSMUSP00000140088.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046268.1"; havana_transcript "OTTMUST00000120617.1";
mm10-chrY	HAVANA	gene	74557760	74558455	.	-	.	gene_id "ENSMUSG00000099661.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28781"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046308.1";
mm10-chrY	HAVANA	transcript	74557760	74558455	.	-	.	gene_id "ENSMUSG00000099661.1"; transcript_id "ENSMUST00000185760.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28781"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28781-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046308.1"; havana_transcript "OTTMUST00000120714.1";
mm10-chrY	HAVANA	exon	74557760	74558455	.	-	.	gene_id "ENSMUSG00000099661.1"; transcript_id "ENSMUST00000185760.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28781"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28781-201"; exon_number 1; exon_id "ENSMUSE00001328046.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046308.1"; havana_transcript "OTTMUST00000120714.1";
mm10-chrY	ENSEMBL	gene	74623896	74624978	.	+	.	gene_id "ENSMUSG00000094507.1"; gene_type "protein_coding"; gene_name "Gm21913"; level 3;
mm10-chrY	ENSEMBL	transcript	74623896	74624978	.	+	.	gene_id "ENSMUSG00000094507.1"; transcript_id "ENSMUST00000179880.1"; gene_type "protein_coding"; gene_name "Gm21913"; transcript_type "protein_coding"; transcript_name "Gm21913-201"; level 3; protein_id "ENSMUSP00000135928.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	74623896	74624978	.	+	.	gene_id "ENSMUSG00000094507.1"; transcript_id "ENSMUST00000179880.1"; gene_type "protein_coding"; gene_name "Gm21913"; transcript_type "protein_coding"; transcript_name "Gm21913-201"; exon_number 1; exon_id "ENSMUSE00000997352.1"; level 3; protein_id "ENSMUSP00000135928.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	74623896	74624978	.	+	0	gene_id "ENSMUSG00000094507.1"; transcript_id "ENSMUST00000179880.1"; gene_type "protein_coding"; gene_name "Gm21913"; transcript_type "protein_coding"; transcript_name "Gm21913-201"; exon_number 1; exon_id "ENSMUSE00000997352.1"; level 3; protein_id "ENSMUSP00000135928.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	74623896	74623898	.	+	0	gene_id "ENSMUSG00000094507.1"; transcript_id "ENSMUST00000179880.1"; gene_type "protein_coding"; gene_name "Gm21913"; transcript_type "protein_coding"; transcript_name "Gm21913-201"; exon_number 1; exon_id "ENSMUSE00000997352.1"; level 3; protein_id "ENSMUSP00000135928.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	74635822	74636680	.	+	.	gene_id "ENSMUSG00000100115.1"; gene_type "lincRNA"; gene_name "Gm28174"; level 2; havana_gene "OTTMUSG00000046309.1";
mm10-chrY	HAVANA	transcript	74635822	74636680	.	+	.	gene_id "ENSMUSG00000100115.1"; transcript_id "ENSMUST00000191003.1"; gene_type "lincRNA"; gene_name "Gm28174"; transcript_type "lincRNA"; transcript_name "Gm28174-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046309.1"; havana_transcript "OTTMUST00000120715.1";
mm10-chrY	HAVANA	exon	74635822	74636007	.	+	.	gene_id "ENSMUSG00000100115.1"; transcript_id "ENSMUST00000191003.1"; gene_type "lincRNA"; gene_name "Gm28174"; transcript_type "lincRNA"; transcript_name "Gm28174-201"; exon_number 1; exon_id "ENSMUSE00001328511.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046309.1"; havana_transcript "OTTMUST00000120715.1";
mm10-chrY	HAVANA	exon	74636497	74636680	.	+	.	gene_id "ENSMUSG00000100115.1"; transcript_id "ENSMUST00000191003.1"; gene_type "lincRNA"; gene_name "Gm28174"; transcript_type "lincRNA"; transcript_name "Gm28174-201"; exon_number 2; exon_id "ENSMUSE00001328934.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046309.1"; havana_transcript "OTTMUST00000120715.1";
mm10-chrY	ENSEMBL	gene	74749140	74749247	.	-	.	gene_id "ENSMUSG00000093946.1"; gene_type "rRNA"; gene_name "Gm22832"; level 3;
mm10-chrY	ENSEMBL	transcript	74749140	74749247	.	-	.	gene_id "ENSMUSG00000093946.1"; transcript_id "ENSMUST00000178022.1"; gene_type "rRNA"; gene_name "Gm22832"; transcript_type "rRNA"; transcript_name "Gm22832-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	74749140	74749247	.	-	.	gene_id "ENSMUSG00000093946.1"; transcript_id "ENSMUST00000178022.1"; gene_type "rRNA"; gene_name "Gm22832"; transcript_type "rRNA"; transcript_name "Gm22832-201"; exon_number 1; exon_id "ENSMUSE00001090799.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	74788951	74789646	.	-	.	gene_id "ENSMUSG00000101881.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21076"; level 2; havana_gene "OTTMUSG00000046310.1";
mm10-chrY	HAVANA	transcript	74788951	74789646	.	-	.	gene_id "ENSMUSG00000101881.1"; transcript_id "ENSMUST00000191597.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21076"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21076-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046310.1"; havana_transcript "OTTMUST00000120716.1";
mm10-chrY	HAVANA	exon	74788951	74789646	.	-	.	gene_id "ENSMUSG00000101881.1"; transcript_id "ENSMUST00000191597.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21076"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21076-201"; exon_number 1; exon_id "ENSMUSE00001325489.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046310.1"; havana_transcript "OTTMUST00000120716.1";
mm10-chrY	HAVANA	gene	74800197	74803127	.	+	.	gene_id "ENSMUSG00000101218.1"; gene_type "lincRNA"; gene_name "Gm29416"; level 2; havana_gene "OTTMUSG00000046366.1";
mm10-chrY	HAVANA	transcript	74800197	74803127	.	+	.	gene_id "ENSMUSG00000101218.1"; transcript_id "ENSMUST00000191328.1"; gene_type "lincRNA"; gene_name "Gm29416"; transcript_type "lincRNA"; transcript_name "Gm29416-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046366.1"; havana_transcript "OTTMUST00000120820.1";
mm10-chrY	HAVANA	exon	74800197	74800538	.	+	.	gene_id "ENSMUSG00000101218.1"; transcript_id "ENSMUST00000191328.1"; gene_type "lincRNA"; gene_name "Gm29416"; transcript_type "lincRNA"; transcript_name "Gm29416-202"; exon_number 1; exon_id "ENSMUSE00001318013.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046366.1"; havana_transcript "OTTMUST00000120820.1";
mm10-chrY	HAVANA	exon	74801014	74801199	.	+	.	gene_id "ENSMUSG00000101218.1"; transcript_id "ENSMUST00000191328.1"; gene_type "lincRNA"; gene_name "Gm29416"; transcript_type "lincRNA"; transcript_name "Gm29416-202"; exon_number 2; exon_id "ENSMUSE00001321438.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046366.1"; havana_transcript "OTTMUST00000120820.1";
mm10-chrY	HAVANA	exon	74801929	74802112	.	+	.	gene_id "ENSMUSG00000101218.1"; transcript_id "ENSMUST00000191328.1"; gene_type "lincRNA"; gene_name "Gm29416"; transcript_type "lincRNA"; transcript_name "Gm29416-202"; exon_number 3; exon_id "ENSMUSE00001326684.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046366.1"; havana_transcript "OTTMUST00000120820.1";
mm10-chrY	HAVANA	exon	74802639	74803127	.	+	.	gene_id "ENSMUSG00000101218.1"; transcript_id "ENSMUST00000191328.1"; gene_type "lincRNA"; gene_name "Gm29416"; transcript_type "lincRNA"; transcript_name "Gm29416-202"; exon_number 4; exon_id "ENSMUSE00001329719.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046366.1"; havana_transcript "OTTMUST00000120820.1";
mm10-chrY	HAVANA	transcript	74800353	74802703	.	+	.	gene_id "ENSMUSG00000101218.1"; transcript_id "ENSMUST00000185577.1"; gene_type "lincRNA"; gene_name "Gm29416"; transcript_type "lincRNA"; transcript_name "Gm29416-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046366.1"; havana_transcript "OTTMUST00000120821.1";
mm10-chrY	HAVANA	exon	74800353	74800538	.	+	.	gene_id "ENSMUSG00000101218.1"; transcript_id "ENSMUST00000185577.1"; gene_type "lincRNA"; gene_name "Gm29416"; transcript_type "lincRNA"; transcript_name "Gm29416-201"; exon_number 1; exon_id "ENSMUSE00001326873.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046366.1"; havana_transcript "OTTMUST00000120821.1";
mm10-chrY	HAVANA	exon	74801018	74801199	.	+	.	gene_id "ENSMUSG00000101218.1"; transcript_id "ENSMUST00000185577.1"; gene_type "lincRNA"; gene_name "Gm29416"; transcript_type "lincRNA"; transcript_name "Gm29416-201"; exon_number 2; exon_id "ENSMUSE00001320970.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046366.1"; havana_transcript "OTTMUST00000120821.1";
mm10-chrY	HAVANA	exon	74802639	74802703	.	+	.	gene_id "ENSMUSG00000101218.1"; transcript_id "ENSMUST00000185577.1"; gene_type "lincRNA"; gene_name "Gm29416"; transcript_type "lincRNA"; transcript_name "Gm29416-201"; exon_number 3; exon_id "ENSMUSE00001323987.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046366.1"; havana_transcript "OTTMUST00000120821.1";
mm10-chrY	ENSEMBL	gene	74910855	74910962	.	-	.	gene_id "ENSMUSG00000094654.1"; gene_type "rRNA"; gene_name "Gm25359"; level 3;
mm10-chrY	ENSEMBL	transcript	74910855	74910962	.	-	.	gene_id "ENSMUSG00000094654.1"; transcript_id "ENSMUST00000179315.1"; gene_type "rRNA"; gene_name "Gm25359"; transcript_type "rRNA"; transcript_name "Gm25359-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	74910855	74910962	.	-	.	gene_id "ENSMUSG00000094654.1"; transcript_id "ENSMUST00000179315.1"; gene_type "rRNA"; gene_name "Gm25359"; transcript_type "rRNA"; transcript_name "Gm25359-201"; exon_number 1; exon_id "ENSMUSE00001094723.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	74950643	74951338	.	-	.	gene_id "ENSMUSG00000101128.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21869"; level 2; havana_gene "OTTMUSG00000046410.1";
mm10-chrY	HAVANA	transcript	74950643	74951338	.	-	.	gene_id "ENSMUSG00000101128.1"; transcript_id "ENSMUST00000189976.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21869"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21869-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046410.1"; havana_transcript "OTTMUST00000120888.1";
mm10-chrY	HAVANA	exon	74950643	74951338	.	-	.	gene_id "ENSMUSG00000101128.1"; transcript_id "ENSMUST00000189976.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21869"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21869-201"; exon_number 1; exon_id "ENSMUSE00001319477.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046410.1"; havana_transcript "OTTMUST00000120888.1";
mm10-chrY	HAVANA	gene	75025380	75026084	.	-	.	gene_id "ENSMUSG00000101788.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20813"; level 2; havana_gene "OTTMUSG00000046411.1";
mm10-chrY	HAVANA	transcript	75025380	75026084	.	-	.	gene_id "ENSMUSG00000101788.1"; transcript_id "ENSMUST00000186646.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20813"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20813-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046411.1"; havana_transcript "OTTMUST00000120889.1";
mm10-chrY	HAVANA	exon	75025380	75026084	.	-	.	gene_id "ENSMUSG00000101788.1"; transcript_id "ENSMUST00000186646.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20813"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20813-201"; exon_number 1; exon_id "ENSMUSE00001325711.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046411.1"; havana_transcript "OTTMUST00000120889.1";
mm10-chrY	HAVANA	gene	75055064	75055678	.	-	.	gene_id "ENSMUSG00000102087.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28790"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046412.1";
mm10-chrY	HAVANA	transcript	75055064	75055678	.	-	.	gene_id "ENSMUSG00000102087.1"; transcript_id "ENSMUST00000189642.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28790"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28790-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046412.1"; havana_transcript "OTTMUST00000120890.1";
mm10-chrY	HAVANA	exon	75055064	75055678	.	-	.	gene_id "ENSMUSG00000102087.1"; transcript_id "ENSMUST00000189642.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28790"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28790-201"; exon_number 1; exon_id "ENSMUSE00001319599.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046412.1"; havana_transcript "OTTMUST00000120890.1";
mm10-chrY	HAVANA	gene	75091899	75092594	.	-	.	gene_id "ENSMUSG00000101428.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29272"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046413.1";
mm10-chrY	HAVANA	transcript	75091899	75092594	.	-	.	gene_id "ENSMUSG00000101428.1"; transcript_id "ENSMUST00000185476.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29272"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29272-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046413.1"; havana_transcript "OTTMUST00000120891.1";
mm10-chrY	HAVANA	exon	75091899	75092594	.	-	.	gene_id "ENSMUSG00000101428.1"; transcript_id "ENSMUST00000185476.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29272"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29272-201"; exon_number 1; exon_id "ENSMUSE00001320414.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046413.1"; havana_transcript "OTTMUST00000120891.1";
mm10-chrY	HAVANA	gene	75133734	75136973	.	+	.	gene_id "ENSMUSG00000100140.1"; gene_type "lincRNA"; gene_name "Gm28789"; level 2; havana_gene "OTTMUSG00000046414.1";
mm10-chrY	HAVANA	transcript	75133734	75136973	.	+	.	gene_id "ENSMUSG00000100140.1"; transcript_id "ENSMUST00000190429.1"; gene_type "lincRNA"; gene_name "Gm28789"; transcript_type "lincRNA"; transcript_name "Gm28789-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046414.1"; havana_transcript "OTTMUST00000120892.1";
mm10-chrY	HAVANA	exon	75133734	75134373	.	+	.	gene_id "ENSMUSG00000100140.1"; transcript_id "ENSMUST00000190429.1"; gene_type "lincRNA"; gene_name "Gm28789"; transcript_type "lincRNA"; transcript_name "Gm28789-202"; exon_number 1; exon_id "ENSMUSE00001327557.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046414.1"; havana_transcript "OTTMUST00000120892.1";
mm10-chrY	HAVANA	exon	75134859	75135044	.	+	.	gene_id "ENSMUSG00000100140.1"; transcript_id "ENSMUST00000190429.1"; gene_type "lincRNA"; gene_name "Gm28789"; transcript_type "lincRNA"; transcript_name "Gm28789-202"; exon_number 2; exon_id "ENSMUSE00001331742.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046414.1"; havana_transcript "OTTMUST00000120892.1";
mm10-chrY	HAVANA	exon	75135774	75135957	.	+	.	gene_id "ENSMUSG00000100140.1"; transcript_id "ENSMUST00000190429.1"; gene_type "lincRNA"; gene_name "Gm28789"; transcript_type "lincRNA"; transcript_name "Gm28789-202"; exon_number 3; exon_id "ENSMUSE00001333593.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046414.1"; havana_transcript "OTTMUST00000120892.1";
mm10-chrY	HAVANA	exon	75136485	75136973	.	+	.	gene_id "ENSMUSG00000100140.1"; transcript_id "ENSMUST00000190429.1"; gene_type "lincRNA"; gene_name "Gm28789"; transcript_type "lincRNA"; transcript_name "Gm28789-202"; exon_number 4; exon_id "ENSMUSE00001319762.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046414.1"; havana_transcript "OTTMUST00000120892.1";
mm10-chrY	HAVANA	transcript	75134187	75136553	.	+	.	gene_id "ENSMUSG00000100140.1"; transcript_id "ENSMUST00000187068.1"; gene_type "lincRNA"; gene_name "Gm28789"; transcript_type "lincRNA"; transcript_name "Gm28789-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046414.1"; havana_transcript "OTTMUST00000120893.1";
mm10-chrY	HAVANA	exon	75134187	75134373	.	+	.	gene_id "ENSMUSG00000100140.1"; transcript_id "ENSMUST00000187068.1"; gene_type "lincRNA"; gene_name "Gm28789"; transcript_type "lincRNA"; transcript_name "Gm28789-201"; exon_number 1; exon_id "ENSMUSE00001330487.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046414.1"; havana_transcript "OTTMUST00000120893.1";
mm10-chrY	HAVANA	exon	75134863	75135044	.	+	.	gene_id "ENSMUSG00000100140.1"; transcript_id "ENSMUST00000187068.1"; gene_type "lincRNA"; gene_name "Gm28789"; transcript_type "lincRNA"; transcript_name "Gm28789-201"; exon_number 2; exon_id "ENSMUSE00001326795.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046414.1"; havana_transcript "OTTMUST00000120893.1";
mm10-chrY	HAVANA	exon	75136485	75136553	.	+	.	gene_id "ENSMUSG00000100140.1"; transcript_id "ENSMUST00000187068.1"; gene_type "lincRNA"; gene_name "Gm28789"; transcript_type "lincRNA"; transcript_name "Gm28789-201"; exon_number 3; exon_id "ENSMUSE00001318567.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046414.1"; havana_transcript "OTTMUST00000120893.1";
mm10-chrY	HAVANA	gene	75195856	75222058	.	+	.	gene_id "ENSMUSG00000101146.1"; gene_type "protein_coding"; gene_name "Gm20814"; level 2; havana_gene "OTTMUSG00000046415.1";
mm10-chrY	HAVANA	transcript	75195856	75222058	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	exon	75195856	75195899	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 1; exon_id "ENSMUSE00001335391.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	exon	75197268	75197399	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 2; exon_id "ENSMUSE00001320438.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	CDS	75197282	75197399	.	+	0	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 2; exon_id "ENSMUSE00001320438.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	start_codon	75197282	75197284	.	+	0	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 2; exon_id "ENSMUSE00001320438.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	exon	75202757	75202823	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 3; exon_id "ENSMUSE00001323567.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	CDS	75202757	75202823	.	+	2	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 3; exon_id "ENSMUSE00001323567.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	exon	75203457	75203491	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 4; exon_id "ENSMUSE00001334421.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	CDS	75203457	75203491	.	+	1	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 4; exon_id "ENSMUSE00001334421.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	exon	75210516	75210582	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 5; exon_id "ENSMUSE00001318270.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	CDS	75210516	75210582	.	+	2	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 5; exon_id "ENSMUSE00001318270.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	exon	75211156	75211190	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 6; exon_id "ENSMUSE00001326754.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	CDS	75211156	75211190	.	+	1	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 6; exon_id "ENSMUSE00001326754.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	exon	75218342	75218459	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 7; exon_id "ENSMUSE00001324216.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	CDS	75218342	75218459	.	+	2	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 7; exon_id "ENSMUSE00001324216.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	exon	75219243	75219342	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 8; exon_id "ENSMUSE00001319513.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	CDS	75219243	75219342	.	+	1	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 8; exon_id "ENSMUSE00001319513.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	exon	75221376	75221474	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 9; exon_id "ENSMUSE00001321792.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	CDS	75221376	75221474	.	+	0	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 9; exon_id "ENSMUSE00001321792.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	exon	75221834	75222058	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 10; exon_id "ENSMUSE00001324819.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	CDS	75221834	75221860	.	+	0	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 10; exon_id "ENSMUSE00001324819.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	stop_codon	75221861	75221863	.	+	0	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 10; exon_id "ENSMUSE00001324819.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	UTR	75195856	75195899	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 1; exon_id "ENSMUSE00001335391.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	UTR	75197268	75197281	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 2; exon_id "ENSMUSE00001320438.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	UTR	75221861	75222058	.	+	.	gene_id "ENSMUSG00000101146.1"; transcript_id "ENSMUST00000190173.1"; gene_type "protein_coding"; gene_name "Gm20814"; transcript_type "protein_coding"; transcript_name "Gm20814-201"; exon_number 10; exon_id "ENSMUSE00001324819.1"; level 2; protein_id "ENSMUSP00000140666.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046415.1"; havana_transcript "OTTMUST00000120894.1";
mm10-chrY	HAVANA	gene	75282305	75283000	.	-	.	gene_id "ENSMUSG00000099499.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28787"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046416.1";
mm10-chrY	HAVANA	transcript	75282305	75283000	.	-	.	gene_id "ENSMUSG00000099499.1"; transcript_id "ENSMUST00000188357.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28787"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28787-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046416.1"; havana_transcript "OTTMUST00000120895.1";
mm10-chrY	HAVANA	exon	75282305	75283000	.	-	.	gene_id "ENSMUSG00000099499.1"; transcript_id "ENSMUST00000188357.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28787"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28787-201"; exon_number 1; exon_id "ENSMUSE00001328116.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046416.1"; havana_transcript "OTTMUST00000120895.1";
mm10-chrY	HAVANA	gene	75319249	75319623	.	-	.	gene_id "ENSMUSG00000101213.1"; gene_type "processed_pseudogene"; gene_name "Gm28788"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046417.1";
mm10-chrY	HAVANA	transcript	75319249	75319623	.	-	.	gene_id "ENSMUSG00000101213.1"; transcript_id "ENSMUST00000189717.1"; gene_type "processed_pseudogene"; gene_name "Gm28788"; transcript_type "processed_pseudogene"; transcript_name "Gm28788-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046417.1"; havana_transcript "OTTMUST00000120896.1";
mm10-chrY	HAVANA	exon	75319249	75319623	.	-	.	gene_id "ENSMUSG00000101213.1"; transcript_id "ENSMUST00000189717.1"; gene_type "processed_pseudogene"; gene_name "Gm28788"; transcript_type "processed_pseudogene"; transcript_name "Gm28788-201"; exon_number 1; exon_id "ENSMUSE00001332170.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046417.1"; havana_transcript "OTTMUST00000120896.1";
mm10-chrY	HAVANA	gene	75356342	75359578	.	+	.	gene_id "ENSMUSG00000099896.1"; gene_type "lincRNA"; gene_name "Gm29278"; level 2; havana_gene "OTTMUSG00000046418.1";
mm10-chrY	HAVANA	transcript	75356342	75359578	.	+	.	gene_id "ENSMUSG00000099896.1"; transcript_id "ENSMUST00000189701.1"; gene_type "lincRNA"; gene_name "Gm29278"; transcript_type "lincRNA"; transcript_name "Gm29278-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046418.1"; havana_transcript "OTTMUST00000120897.1";
mm10-chrY	HAVANA	exon	75356342	75356979	.	+	.	gene_id "ENSMUSG00000099896.1"; transcript_id "ENSMUST00000189701.1"; gene_type "lincRNA"; gene_name "Gm29278"; transcript_type "lincRNA"; transcript_name "Gm29278-202"; exon_number 1; exon_id "ENSMUSE00001331079.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046418.1"; havana_transcript "OTTMUST00000120897.1";
mm10-chrY	HAVANA	exon	75357465	75357650	.	+	.	gene_id "ENSMUSG00000099896.1"; transcript_id "ENSMUST00000189701.1"; gene_type "lincRNA"; gene_name "Gm29278"; transcript_type "lincRNA"; transcript_name "Gm29278-202"; exon_number 2; exon_id "ENSMUSE00001333100.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046418.1"; havana_transcript "OTTMUST00000120897.1";
mm10-chrY	HAVANA	exon	75358380	75358563	.	+	.	gene_id "ENSMUSG00000099896.1"; transcript_id "ENSMUST00000189701.1"; gene_type "lincRNA"; gene_name "Gm29278"; transcript_type "lincRNA"; transcript_name "Gm29278-202"; exon_number 3; exon_id "ENSMUSE00001329144.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046418.1"; havana_transcript "OTTMUST00000120897.1";
mm10-chrY	HAVANA	exon	75359090	75359578	.	+	.	gene_id "ENSMUSG00000099896.1"; transcript_id "ENSMUST00000189701.1"; gene_type "lincRNA"; gene_name "Gm29278"; transcript_type "lincRNA"; transcript_name "Gm29278-202"; exon_number 4; exon_id "ENSMUSE00001327081.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046418.1"; havana_transcript "OTTMUST00000120897.1";
mm10-chrY	HAVANA	transcript	75356794	75359158	.	+	.	gene_id "ENSMUSG00000099896.1"; transcript_id "ENSMUST00000186793.1"; gene_type "lincRNA"; gene_name "Gm29278"; transcript_type "lincRNA"; transcript_name "Gm29278-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046418.1"; havana_transcript "OTTMUST00000120898.1";
mm10-chrY	HAVANA	exon	75356794	75356979	.	+	.	gene_id "ENSMUSG00000099896.1"; transcript_id "ENSMUST00000186793.1"; gene_type "lincRNA"; gene_name "Gm29278"; transcript_type "lincRNA"; transcript_name "Gm29278-201"; exon_number 1; exon_id "ENSMUSE00001334082.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046418.1"; havana_transcript "OTTMUST00000120898.1";
mm10-chrY	HAVANA	exon	75357469	75357650	.	+	.	gene_id "ENSMUSG00000099896.1"; transcript_id "ENSMUST00000186793.1"; gene_type "lincRNA"; gene_name "Gm29278"; transcript_type "lincRNA"; transcript_name "Gm29278-201"; exon_number 2; exon_id "ENSMUSE00001318392.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046418.1"; havana_transcript "OTTMUST00000120898.1";
mm10-chrY	HAVANA	exon	75359090	75359158	.	+	.	gene_id "ENSMUSG00000099896.1"; transcript_id "ENSMUST00000186793.1"; gene_type "lincRNA"; gene_name "Gm29278"; transcript_type "lincRNA"; transcript_name "Gm29278-201"; exon_number 3; exon_id "ENSMUSE00001321733.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046418.1"; havana_transcript "OTTMUST00000120898.1";
mm10-chrY	HAVANA	gene	75465695	75466372	.	-	.	gene_id "ENSMUSG00000101980.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21922"; level 2; havana_gene "OTTMUSG00000046419.1";
mm10-chrY	HAVANA	transcript	75465695	75466372	.	-	.	gene_id "ENSMUSG00000101980.1"; transcript_id "ENSMUST00000185911.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21922"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21922-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046419.1"; havana_transcript "OTTMUST00000120899.1";
mm10-chrY	HAVANA	exon	75465695	75466372	.	-	.	gene_id "ENSMUSG00000101980.1"; transcript_id "ENSMUST00000185911.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21922"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21922-201"; exon_number 1; exon_id "ENSMUSE00001328340.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046419.1"; havana_transcript "OTTMUST00000120899.1";
mm10-chrY	HAVANA	gene	75539703	75540398	.	-	.	gene_id "ENSMUSG00000100669.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21111"; level 2; havana_gene "OTTMUSG00000046420.1";
mm10-chrY	HAVANA	transcript	75539703	75540398	.	-	.	gene_id "ENSMUSG00000100669.1"; transcript_id "ENSMUST00000187671.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21111"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21111-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046420.1"; havana_transcript "OTTMUST00000120900.1";
mm10-chrY	HAVANA	exon	75539703	75540398	.	-	.	gene_id "ENSMUSG00000100669.1"; transcript_id "ENSMUST00000187671.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21111"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21111-201"; exon_number 1; exon_id "ENSMUSE00001327325.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046420.1"; havana_transcript "OTTMUST00000120900.1";
mm10-chrY	HAVANA	gene	75568897	75569511	.	-	.	gene_id "ENSMUSG00000100260.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28608"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046421.1";
mm10-chrY	HAVANA	transcript	75568897	75569511	.	-	.	gene_id "ENSMUSG00000100260.1"; transcript_id "ENSMUST00000186860.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28608"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28608-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046421.1"; havana_transcript "OTTMUST00000120901.1";
mm10-chrY	HAVANA	exon	75568897	75569511	.	-	.	gene_id "ENSMUSG00000100260.1"; transcript_id "ENSMUST00000186860.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28608"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28608-201"; exon_number 1; exon_id "ENSMUSE00001333165.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046421.1"; havana_transcript "OTTMUST00000120901.1";
mm10-chrY	HAVANA	gene	75605692	75606030	.	-	.	gene_id "ENSMUSG00000100675.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28607"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046422.1";
mm10-chrY	HAVANA	transcript	75605692	75606030	.	-	.	gene_id "ENSMUSG00000100675.1"; transcript_id "ENSMUST00000190142.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28607"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28607-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046422.1"; havana_transcript "OTTMUST00000120902.1";
mm10-chrY	HAVANA	exon	75605692	75606030	.	-	.	gene_id "ENSMUSG00000100675.1"; transcript_id "ENSMUST00000190142.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28607"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28607-201"; exon_number 1; exon_id "ENSMUSE00001318323.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046422.1"; havana_transcript "OTTMUST00000120902.1";
mm10-chrY	HAVANA	gene	75653226	75656465	.	+	.	gene_id "ENSMUSG00000100544.1"; gene_type "lincRNA"; gene_name "Gm28606"; level 2; havana_gene "OTTMUSG00000046423.1";
mm10-chrY	HAVANA	transcript	75653226	75656465	.	+	.	gene_id "ENSMUSG00000100544.1"; transcript_id "ENSMUST00000188938.1"; gene_type "lincRNA"; gene_name "Gm28606"; transcript_type "lincRNA"; transcript_name "Gm28606-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046423.1"; havana_transcript "OTTMUST00000120903.1";
mm10-chrY	HAVANA	exon	75653226	75653865	.	+	.	gene_id "ENSMUSG00000100544.1"; transcript_id "ENSMUST00000188938.1"; gene_type "lincRNA"; gene_name "Gm28606"; transcript_type "lincRNA"; transcript_name "Gm28606-201"; exon_number 1; exon_id "ENSMUSE00001319857.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046423.1"; havana_transcript "OTTMUST00000120903.1";
mm10-chrY	HAVANA	exon	75654351	75654536	.	+	.	gene_id "ENSMUSG00000100544.1"; transcript_id "ENSMUST00000188938.1"; gene_type "lincRNA"; gene_name "Gm28606"; transcript_type "lincRNA"; transcript_name "Gm28606-201"; exon_number 2; exon_id "ENSMUSE00001320641.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046423.1"; havana_transcript "OTTMUST00000120903.1";
mm10-chrY	HAVANA	exon	75655266	75655449	.	+	.	gene_id "ENSMUSG00000100544.1"; transcript_id "ENSMUST00000188938.1"; gene_type "lincRNA"; gene_name "Gm28606"; transcript_type "lincRNA"; transcript_name "Gm28606-201"; exon_number 3; exon_id "ENSMUSE00001318344.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046423.1"; havana_transcript "OTTMUST00000120903.1";
mm10-chrY	HAVANA	exon	75655977	75656465	.	+	.	gene_id "ENSMUSG00000100544.1"; transcript_id "ENSMUST00000188938.1"; gene_type "lincRNA"; gene_name "Gm28606"; transcript_type "lincRNA"; transcript_name "Gm28606-201"; exon_number 4; exon_id "ENSMUSE00001327300.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046423.1"; havana_transcript "OTTMUST00000120903.1";
mm10-chrY	HAVANA	transcript	75653679	75656045	.	+	.	gene_id "ENSMUSG00000100544.1"; transcript_id "ENSMUST00000190412.1"; gene_type "lincRNA"; gene_name "Gm28606"; transcript_type "lincRNA"; transcript_name "Gm28606-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046423.1"; havana_transcript "OTTMUST00000120904.1";
mm10-chrY	HAVANA	exon	75653679	75653865	.	+	.	gene_id "ENSMUSG00000100544.1"; transcript_id "ENSMUST00000190412.1"; gene_type "lincRNA"; gene_name "Gm28606"; transcript_type "lincRNA"; transcript_name "Gm28606-202"; exon_number 1; exon_id "ENSMUSE00001332694.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046423.1"; havana_transcript "OTTMUST00000120904.1";
mm10-chrY	HAVANA	exon	75654355	75654536	.	+	.	gene_id "ENSMUSG00000100544.1"; transcript_id "ENSMUST00000190412.1"; gene_type "lincRNA"; gene_name "Gm28606"; transcript_type "lincRNA"; transcript_name "Gm28606-202"; exon_number 2; exon_id "ENSMUSE00001324824.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046423.1"; havana_transcript "OTTMUST00000120904.1";
mm10-chrY	HAVANA	exon	75655977	75656045	.	+	.	gene_id "ENSMUSG00000100544.1"; transcript_id "ENSMUST00000190412.1"; gene_type "lincRNA"; gene_name "Gm28606"; transcript_type "lincRNA"; transcript_name "Gm28606-202"; exon_number 3; exon_id "ENSMUSE00001336109.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046423.1"; havana_transcript "OTTMUST00000120904.1";
mm10-chrY	HAVANA	gene	75715322	75741549	.	+	.	gene_id "ENSMUSG00000100902.1"; gene_type "protein_coding"; gene_name "Gm20850"; level 2; havana_gene "OTTMUSG00000046435.1";
mm10-chrY	HAVANA	transcript	75715322	75741549	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	exon	75715322	75715365	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 1; exon_id "ENSMUSE00001334358.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	exon	75716732	75716863	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 2; exon_id "ENSMUSE00001327197.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	CDS	75716746	75716863	.	+	0	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 2; exon_id "ENSMUSE00001327197.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	start_codon	75716746	75716748	.	+	0	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 2; exon_id "ENSMUSE00001327197.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	exon	75722206	75722272	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 3; exon_id "ENSMUSE00001326687.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	CDS	75722206	75722272	.	+	2	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 3; exon_id "ENSMUSE00001326687.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	exon	75722928	75722962	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 4; exon_id "ENSMUSE00001326446.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	CDS	75722928	75722962	.	+	1	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 4; exon_id "ENSMUSE00001326446.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	exon	75729970	75730036	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 5; exon_id "ENSMUSE00001327688.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	CDS	75729970	75730036	.	+	2	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 5; exon_id "ENSMUSE00001327688.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	exon	75730618	75730652	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 6; exon_id "ENSMUSE00001318099.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	CDS	75730618	75730652	.	+	1	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 6; exon_id "ENSMUSE00001318099.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	exon	75737841	75737958	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 7; exon_id "ENSMUSE00001328056.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	CDS	75737841	75737958	.	+	2	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 7; exon_id "ENSMUSE00001328056.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	exon	75738726	75738825	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 8; exon_id "ENSMUSE00001329761.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	CDS	75738726	75738825	.	+	1	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 8; exon_id "ENSMUSE00001329761.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	exon	75740865	75740963	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 9; exon_id "ENSMUSE00001323112.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	CDS	75740865	75740963	.	+	0	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 9; exon_id "ENSMUSE00001323112.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	exon	75741323	75741549	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 10; exon_id "ENSMUSE00001324971.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	CDS	75741323	75741349	.	+	0	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 10; exon_id "ENSMUSE00001324971.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	stop_codon	75741350	75741352	.	+	0	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 10; exon_id "ENSMUSE00001324971.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	UTR	75715322	75715365	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 1; exon_id "ENSMUSE00001334358.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	UTR	75716732	75716745	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 2; exon_id "ENSMUSE00001327197.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	UTR	75741350	75741549	.	+	.	gene_id "ENSMUSG00000100902.1"; transcript_id "ENSMUST00000188672.1"; gene_type "protein_coding"; gene_name "Gm20850"; transcript_type "protein_coding"; transcript_name "Gm20850-201"; exon_number 10; exon_id "ENSMUSE00001324971.1"; level 2; protein_id "ENSMUSP00000141004.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046435.1"; havana_transcript "OTTMUST00000120921.1";
mm10-chrY	HAVANA	gene	75801932	75802627	.	-	.	gene_id "ENSMUSG00000100673.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29574"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046452.1";
mm10-chrY	HAVANA	transcript	75801932	75802627	.	-	.	gene_id "ENSMUSG00000100673.1"; transcript_id "ENSMUST00000186226.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29574"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29574-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046452.1"; havana_transcript "OTTMUST00000120941.1";
mm10-chrY	HAVANA	exon	75801932	75802627	.	-	.	gene_id "ENSMUSG00000100673.1"; transcript_id "ENSMUST00000186226.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29574"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29574-201"; exon_number 1; exon_id "ENSMUSE00001327383.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046452.1"; havana_transcript "OTTMUST00000120941.1";
mm10-chrY	HAVANA	gene	75838914	75839228	.	-	.	gene_id "ENSMUSG00000102025.1"; gene_type "processed_pseudogene"; gene_name "Gm29575"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046453.1";
mm10-chrY	HAVANA	transcript	75838914	75839228	.	-	.	gene_id "ENSMUSG00000102025.1"; transcript_id "ENSMUST00000190597.1"; gene_type "processed_pseudogene"; gene_name "Gm29575"; transcript_type "processed_pseudogene"; transcript_name "Gm29575-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046453.1"; havana_transcript "OTTMUST00000120942.1";
mm10-chrY	HAVANA	exon	75838914	75839228	.	-	.	gene_id "ENSMUSG00000102025.1"; transcript_id "ENSMUST00000190597.1"; gene_type "processed_pseudogene"; gene_name "Gm29575"; transcript_type "processed_pseudogene"; transcript_name "Gm29575-201"; exon_number 1; exon_id "ENSMUSE00001334448.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046453.1"; havana_transcript "OTTMUST00000120942.1";
mm10-chrY	HAVANA	gene	75986728	75987423	.	-	.	gene_id "ENSMUSG00000099944.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21875"; level 2; havana_gene "OTTMUSG00000046454.1";
mm10-chrY	HAVANA	transcript	75986728	75987423	.	-	.	gene_id "ENSMUSG00000099944.1"; transcript_id "ENSMUST00000191195.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21875"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21875-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046454.1"; havana_transcript "OTTMUST00000120943.1";
mm10-chrY	HAVANA	exon	75986728	75987423	.	-	.	gene_id "ENSMUSG00000099944.1"; transcript_id "ENSMUST00000191195.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21875"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21875-201"; exon_number 1; exon_id "ENSMUSE00001321399.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046454.1"; havana_transcript "OTTMUST00000120943.1";
mm10-chrY	HAVANA	gene	76060956	76061651	.	-	.	gene_id "ENSMUSG00000100226.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20904"; level 2; havana_gene "OTTMUSG00000046455.1";
mm10-chrY	HAVANA	transcript	76060956	76061651	.	-	.	gene_id "ENSMUSG00000100226.1"; transcript_id "ENSMUST00000190518.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20904"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20904-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046455.1"; havana_transcript "OTTMUST00000120944.1";
mm10-chrY	HAVANA	exon	76060956	76061651	.	-	.	gene_id "ENSMUSG00000100226.1"; transcript_id "ENSMUST00000190518.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20904"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20904-201"; exon_number 1; exon_id "ENSMUSE00001318000.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046455.1"; havana_transcript "OTTMUST00000120944.1";
mm10-chrY	HAVANA	gene	76090562	76091239	.	-	.	gene_id "ENSMUSG00000101957.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29576"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046456.1";
mm10-chrY	HAVANA	transcript	76090562	76091239	.	-	.	gene_id "ENSMUSG00000101957.1"; transcript_id "ENSMUST00000188020.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29576"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29576-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046456.1"; havana_transcript "OTTMUST00000120945.1";
mm10-chrY	HAVANA	exon	76090562	76091239	.	-	.	gene_id "ENSMUSG00000101957.1"; transcript_id "ENSMUST00000188020.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29576"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29576-201"; exon_number 1; exon_id "ENSMUSE00001331051.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046456.1"; havana_transcript "OTTMUST00000120945.1";
mm10-chrY	HAVANA	gene	76127494	76128186	.	-	.	gene_id "ENSMUSG00000101071.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29577"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046457.1";
mm10-chrY	HAVANA	transcript	76127494	76128186	.	-	.	gene_id "ENSMUSG00000101071.1"; transcript_id "ENSMUST00000186427.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29577"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29577-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046457.1"; havana_transcript "OTTMUST00000120946.1";
mm10-chrY	HAVANA	exon	76127494	76128186	.	-	.	gene_id "ENSMUSG00000101071.1"; transcript_id "ENSMUST00000186427.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29577"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29577-201"; exon_number 1; exon_id "ENSMUSE00001329476.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046457.1"; havana_transcript "OTTMUST00000120946.1";
mm10-chrY	HAVANA	gene	76232645	76258846	.	+	.	gene_id "ENSMUSG00000099425.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; level 2; havana_gene "OTTMUSG00000046458.1";
mm10-chrY	HAVANA	transcript	76232645	76258846	.	+	.	gene_id "ENSMUSG00000099425.1"; transcript_id "ENSMUST00000190291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29573-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046458.1"; havana_transcript "OTTMUST00000120947.1";
mm10-chrY	HAVANA	exon	76232645	76232688	.	+	.	gene_id "ENSMUSG00000099425.1"; transcript_id "ENSMUST00000190291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29573-201"; exon_number 1; exon_id "ENSMUSE00001319545.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046458.1"; havana_transcript "OTTMUST00000120947.1";
mm10-chrY	HAVANA	exon	76234054	76234185	.	+	.	gene_id "ENSMUSG00000099425.1"; transcript_id "ENSMUST00000190291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29573-201"; exon_number 2; exon_id "ENSMUSE00001335215.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046458.1"; havana_transcript "OTTMUST00000120947.1";
mm10-chrY	HAVANA	exon	76239519	76239585	.	+	.	gene_id "ENSMUSG00000099425.1"; transcript_id "ENSMUST00000190291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29573-201"; exon_number 3; exon_id "ENSMUSE00001324588.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046458.1"; havana_transcript "OTTMUST00000120947.1";
mm10-chrY	HAVANA	exon	76240212	76240246	.	+	.	gene_id "ENSMUSG00000099425.1"; transcript_id "ENSMUST00000190291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29573-201"; exon_number 4; exon_id "ENSMUSE00001323777.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046458.1"; havana_transcript "OTTMUST00000120947.1";
mm10-chrY	HAVANA	exon	76247256	76247322	.	+	.	gene_id "ENSMUSG00000099425.1"; transcript_id "ENSMUST00000190291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29573-201"; exon_number 5; exon_id "ENSMUSE00001331384.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046458.1"; havana_transcript "OTTMUST00000120947.1";
mm10-chrY	HAVANA	exon	76247900	76247934	.	+	.	gene_id "ENSMUSG00000099425.1"; transcript_id "ENSMUST00000190291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29573-201"; exon_number 6; exon_id "ENSMUSE00001333450.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046458.1"; havana_transcript "OTTMUST00000120947.1";
mm10-chrY	HAVANA	exon	76255147	76255264	.	+	.	gene_id "ENSMUSG00000099425.1"; transcript_id "ENSMUST00000190291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29573-201"; exon_number 7; exon_id "ENSMUSE00001328226.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046458.1"; havana_transcript "OTTMUST00000120947.1";
mm10-chrY	HAVANA	exon	76256029	76256128	.	+	.	gene_id "ENSMUSG00000099425.1"; transcript_id "ENSMUST00000190291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29573-201"; exon_number 8; exon_id "ENSMUSE00001327335.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046458.1"; havana_transcript "OTTMUST00000120947.1";
mm10-chrY	HAVANA	exon	76258167	76258265	.	+	.	gene_id "ENSMUSG00000099425.1"; transcript_id "ENSMUST00000190291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29573-201"; exon_number 9; exon_id "ENSMUSE00001334381.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046458.1"; havana_transcript "OTTMUST00000120947.1";
mm10-chrY	HAVANA	exon	76258625	76258846	.	+	.	gene_id "ENSMUSG00000099425.1"; transcript_id "ENSMUST00000190291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29573"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29573-201"; exon_number 10; exon_id "ENSMUSE00001332395.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046458.1"; havana_transcript "OTTMUST00000120947.1";
mm10-chrY	HAVANA	gene	76319160	76319879	.	-	.	gene_id "ENSMUSG00000101020.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28377"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046477.1";
mm10-chrY	HAVANA	transcript	76319160	76319879	.	-	.	gene_id "ENSMUSG00000101020.1"; transcript_id "ENSMUST00000189695.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28377"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28377-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046477.1"; havana_transcript "OTTMUST00000120974.1";
mm10-chrY	HAVANA	exon	76319160	76319879	.	-	.	gene_id "ENSMUSG00000101020.1"; transcript_id "ENSMUST00000189695.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28377"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28377-201"; exon_number 1; exon_id "ENSMUSE00001318097.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046477.1"; havana_transcript "OTTMUST00000120974.1";
mm10-chrY	ENSEMBL	gene	76378662	76379744	.	+	.	gene_id "ENSMUSG00000094404.1"; gene_type "protein_coding"; gene_name "Gm21776"; level 3;
mm10-chrY	ENSEMBL	transcript	76378662	76379744	.	+	.	gene_id "ENSMUSG00000094404.1"; transcript_id "ENSMUST00000177676.1"; gene_type "protein_coding"; gene_name "Gm21776"; transcript_type "protein_coding"; transcript_name "Gm21776-201"; level 3; protein_id "ENSMUSP00000137326.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	76378662	76379744	.	+	.	gene_id "ENSMUSG00000094404.1"; transcript_id "ENSMUST00000177676.1"; gene_type "protein_coding"; gene_name "Gm21776"; transcript_type "protein_coding"; transcript_name "Gm21776-201"; exon_number 1; exon_id "ENSMUSE00001049808.1"; level 3; protein_id "ENSMUSP00000137326.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	76378662	76379744	.	+	0	gene_id "ENSMUSG00000094404.1"; transcript_id "ENSMUST00000177676.1"; gene_type "protein_coding"; gene_name "Gm21776"; transcript_type "protein_coding"; transcript_name "Gm21776-201"; exon_number 1; exon_id "ENSMUSE00001049808.1"; level 3; protein_id "ENSMUSP00000137326.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	76378662	76378664	.	+	0	gene_id "ENSMUSG00000094404.1"; transcript_id "ENSMUST00000177676.1"; gene_type "protein_coding"; gene_name "Gm21776"; transcript_type "protein_coding"; transcript_name "Gm21776-201"; exon_number 1; exon_id "ENSMUSE00001049808.1"; level 3; protein_id "ENSMUSP00000137326.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	HAVANA	gene	76500775	76501467	.	-	.	gene_id "ENSMUSG00000101408.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21155"; level 2; havana_gene "OTTMUSG00000046478.1";
mm10-chrY	HAVANA	transcript	76500775	76501467	.	-	.	gene_id "ENSMUSG00000101408.1"; transcript_id "ENSMUST00000190460.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21155"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21155-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046478.1"; havana_transcript "OTTMUST00000120975.1";
mm10-chrY	HAVANA	exon	76500775	76501467	.	-	.	gene_id "ENSMUSG00000101408.1"; transcript_id "ENSMUST00000190460.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21155"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21155-201"; exon_number 1; exon_id "ENSMUSE00001327591.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046478.1"; havana_transcript "OTTMUST00000120975.1";
mm10-chrY	HAVANA	gene	76575718	76576410	.	-	.	gene_id "ENSMUSG00000100643.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21163"; level 2; havana_gene "OTTMUSG00000046479.1";
mm10-chrY	HAVANA	transcript	76575718	76576410	.	-	.	gene_id "ENSMUSG00000100643.1"; transcript_id "ENSMUST00000189276.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21163"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21163-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046479.1"; havana_transcript "OTTMUST00000120976.1";
mm10-chrY	HAVANA	exon	76575718	76576410	.	-	.	gene_id "ENSMUSG00000100643.1"; transcript_id "ENSMUST00000189276.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21163"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21163-201"; exon_number 1; exon_id "ENSMUSE00001319589.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046479.1"; havana_transcript "OTTMUST00000120976.1";
mm10-chrY	HAVANA	gene	76605450	76606064	.	-	.	gene_id "ENSMUSG00000101898.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28122"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046480.1";
mm10-chrY	HAVANA	transcript	76605450	76606064	.	-	.	gene_id "ENSMUSG00000101898.1"; transcript_id "ENSMUST00000187088.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28122"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28122-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046480.1"; havana_transcript "OTTMUST00000120977.1";
mm10-chrY	HAVANA	exon	76605450	76606064	.	-	.	gene_id "ENSMUSG00000101898.1"; transcript_id "ENSMUST00000187088.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28122"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28122-201"; exon_number 1; exon_id "ENSMUSE00001332273.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046480.1"; havana_transcript "OTTMUST00000120977.1";
mm10-chrY	HAVANA	gene	76642270	76642608	.	-	.	gene_id "ENSMUSG00000100050.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28121"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046481.1";
mm10-chrY	HAVANA	transcript	76642270	76642608	.	-	.	gene_id "ENSMUSG00000100050.1"; transcript_id "ENSMUST00000191420.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28121"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28121-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046481.1"; havana_transcript "OTTMUST00000120978.1";
mm10-chrY	HAVANA	exon	76642270	76642608	.	-	.	gene_id "ENSMUSG00000100050.1"; transcript_id "ENSMUST00000191420.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28121"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28121-201"; exon_number 1; exon_id "ENSMUSE00001326573.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046481.1"; havana_transcript "OTTMUST00000120978.1";
mm10-chrY	HAVANA	gene	76761600	76787729	.	+	.	gene_id "ENSMUSG00000100708.1"; gene_type "protein_coding"; gene_name "Gm21173"; level 2; havana_gene "OTTMUSG00000046482.1";
mm10-chrY	HAVANA	transcript	76761600	76787729	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	exon	76761600	76761643	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 1; exon_id "ENSMUSE00001330545.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	exon	76763008	76763139	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 2; exon_id "ENSMUSE00001335362.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	CDS	76763022	76763139	.	+	0	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 2; exon_id "ENSMUSE00001335362.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	start_codon	76763022	76763024	.	+	0	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 2; exon_id "ENSMUSE00001335362.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	exon	76768469	76768535	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 3; exon_id "ENSMUSE00001326569.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	CDS	76768469	76768535	.	+	2	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 3; exon_id "ENSMUSE00001326569.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	exon	76769144	76769178	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 4; exon_id "ENSMUSE00001327262.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	CDS	76769144	76769178	.	+	1	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 4; exon_id "ENSMUSE00001327262.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	exon	76776191	76776257	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 5; exon_id "ENSMUSE00001321211.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	CDS	76776191	76776257	.	+	2	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 5; exon_id "ENSMUSE00001321211.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	exon	76776845	76776879	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 6; exon_id "ENSMUSE00001331695.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	CDS	76776845	76776879	.	+	1	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 6; exon_id "ENSMUSE00001331695.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	exon	76784027	76784144	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 7; exon_id "ENSMUSE00001319106.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	CDS	76784027	76784144	.	+	2	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 7; exon_id "ENSMUSE00001319106.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	exon	76784913	76785012	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 8; exon_id "ENSMUSE00001322879.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	CDS	76784913	76785012	.	+	1	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 8; exon_id "ENSMUSE00001322879.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	exon	76787046	76787144	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 9; exon_id "ENSMUSE00001333920.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	CDS	76787046	76787144	.	+	0	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 9; exon_id "ENSMUSE00001333920.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	exon	76787504	76787729	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 10; exon_id "ENSMUSE00001335868.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	CDS	76787504	76787530	.	+	0	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 10; exon_id "ENSMUSE00001335868.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	stop_codon	76787531	76787533	.	+	0	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 10; exon_id "ENSMUSE00001335868.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	UTR	76761600	76761643	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 1; exon_id "ENSMUSE00001330545.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	UTR	76763008	76763021	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 2; exon_id "ENSMUSE00001335362.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	UTR	76787531	76787729	.	+	.	gene_id "ENSMUSG00000100708.1"; transcript_id "ENSMUST00000189238.1"; gene_type "protein_coding"; gene_name "Gm21173"; transcript_type "protein_coding"; transcript_name "Gm21173-201"; exon_number 10; exon_id "ENSMUSE00001335868.1"; level 2; protein_id "ENSMUSP00000140477.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046482.1"; havana_transcript "OTTMUST00000120979.1";
mm10-chrY	HAVANA	gene	76849181	76849876	.	-	.	gene_id "ENSMUSG00000101238.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28123"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046483.1";
mm10-chrY	HAVANA	transcript	76849181	76849876	.	-	.	gene_id "ENSMUSG00000101238.1"; transcript_id "ENSMUST00000189725.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28123-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046483.1"; havana_transcript "OTTMUST00000120980.1";
mm10-chrY	HAVANA	exon	76849181	76849876	.	-	.	gene_id "ENSMUSG00000101238.1"; transcript_id "ENSMUST00000189725.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28123"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28123-201"; exon_number 1; exon_id "ENSMUSE00001319156.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046483.1"; havana_transcript "OTTMUST00000120980.1";
mm10-chrY	HAVANA	gene	76886276	76886590	.	-	.	gene_id "ENSMUSG00000100406.1"; gene_type "processed_pseudogene"; gene_name "Gm28120"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046484.1";
mm10-chrY	HAVANA	transcript	76886276	76886590	.	-	.	gene_id "ENSMUSG00000100406.1"; transcript_id "ENSMUST00000188812.1"; gene_type "processed_pseudogene"; gene_name "Gm28120"; transcript_type "processed_pseudogene"; transcript_name "Gm28120-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046484.1"; havana_transcript "OTTMUST00000120981.1";
mm10-chrY	HAVANA	exon	76886276	76886590	.	-	.	gene_id "ENSMUSG00000100406.1"; transcript_id "ENSMUST00000188812.1"; gene_type "processed_pseudogene"; gene_name "Gm28120"; transcript_type "processed_pseudogene"; transcript_name "Gm28120-201"; exon_number 1; exon_id "ENSMUSE00001328323.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046484.1"; havana_transcript "OTTMUST00000120981.1";
mm10-chrY	HAVANA	gene	76923339	76926578	.	+	.	gene_id "ENSMUSG00000099526.1"; gene_type "lincRNA"; gene_name "Gm29313"; level 2; havana_gene "OTTMUSG00000046500.1";
mm10-chrY	HAVANA	transcript	76923339	76926578	.	+	.	gene_id "ENSMUSG00000099526.1"; transcript_id "ENSMUST00000187866.1"; gene_type "lincRNA"; gene_name "Gm29313"; transcript_type "lincRNA"; transcript_name "Gm29313-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046500.1"; havana_transcript "OTTMUST00000121004.1";
mm10-chrY	HAVANA	exon	76923339	76923978	.	+	.	gene_id "ENSMUSG00000099526.1"; transcript_id "ENSMUST00000187866.1"; gene_type "lincRNA"; gene_name "Gm29313"; transcript_type "lincRNA"; transcript_name "Gm29313-201"; exon_number 1; exon_id "ENSMUSE00001325695.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046500.1"; havana_transcript "OTTMUST00000121004.1";
mm10-chrY	HAVANA	exon	76924464	76924649	.	+	.	gene_id "ENSMUSG00000099526.1"; transcript_id "ENSMUST00000187866.1"; gene_type "lincRNA"; gene_name "Gm29313"; transcript_type "lincRNA"; transcript_name "Gm29313-201"; exon_number 2; exon_id "ENSMUSE00001322780.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046500.1"; havana_transcript "OTTMUST00000121004.1";
mm10-chrY	HAVANA	exon	76925379	76925562	.	+	.	gene_id "ENSMUSG00000099526.1"; transcript_id "ENSMUST00000187866.1"; gene_type "lincRNA"; gene_name "Gm29313"; transcript_type "lincRNA"; transcript_name "Gm29313-201"; exon_number 3; exon_id "ENSMUSE00001333563.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046500.1"; havana_transcript "OTTMUST00000121004.1";
mm10-chrY	HAVANA	exon	76926089	76926578	.	+	.	gene_id "ENSMUSG00000099526.1"; transcript_id "ENSMUST00000187866.1"; gene_type "lincRNA"; gene_name "Gm29313"; transcript_type "lincRNA"; transcript_name "Gm29313-201"; exon_number 4; exon_id "ENSMUSE00001329795.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046500.1"; havana_transcript "OTTMUST00000121004.1";
mm10-chrY	HAVANA	transcript	76923792	76926157	.	+	.	gene_id "ENSMUSG00000099526.1"; transcript_id "ENSMUST00000189699.1"; gene_type "lincRNA"; gene_name "Gm29313"; transcript_type "lincRNA"; transcript_name "Gm29313-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046500.1"; havana_transcript "OTTMUST00000121005.1";
mm10-chrY	HAVANA	exon	76923792	76923978	.	+	.	gene_id "ENSMUSG00000099526.1"; transcript_id "ENSMUST00000189699.1"; gene_type "lincRNA"; gene_name "Gm29313"; transcript_type "lincRNA"; transcript_name "Gm29313-202"; exon_number 1; exon_id "ENSMUSE00001320781.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046500.1"; havana_transcript "OTTMUST00000121005.1";
mm10-chrY	HAVANA	exon	76924468	76924649	.	+	.	gene_id "ENSMUSG00000099526.1"; transcript_id "ENSMUST00000189699.1"; gene_type "lincRNA"; gene_name "Gm29313"; transcript_type "lincRNA"; transcript_name "Gm29313-202"; exon_number 2; exon_id "ENSMUSE00001323014.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046500.1"; havana_transcript "OTTMUST00000121005.1";
mm10-chrY	HAVANA	exon	76926089	76926157	.	+	.	gene_id "ENSMUSG00000099526.1"; transcript_id "ENSMUST00000189699.1"; gene_type "lincRNA"; gene_name "Gm29313"; transcript_type "lincRNA"; transcript_name "Gm29313-202"; exon_number 3; exon_id "ENSMUSE00001329187.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046500.1"; havana_transcript "OTTMUST00000121005.1";
mm10-chrY	HAVANA	gene	77074033	77074728	.	-	.	gene_id "ENSMUSG00000100560.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21180"; level 2; havana_gene "OTTMUSG00000046501.1";
mm10-chrY	HAVANA	transcript	77074033	77074728	.	-	.	gene_id "ENSMUSG00000100560.1"; transcript_id "ENSMUST00000187388.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21180"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21180-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046501.1"; havana_transcript "OTTMUST00000121006.1";
mm10-chrY	HAVANA	exon	77074033	77074728	.	-	.	gene_id "ENSMUSG00000100560.1"; transcript_id "ENSMUST00000187388.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21180"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21180-201"; exon_number 1; exon_id "ENSMUSE00001329701.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046501.1"; havana_transcript "OTTMUST00000121006.1";
mm10-chrY	HAVANA	gene	77148730	77149422	.	-	.	gene_id "ENSMUSG00000101478.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20859"; level 2; havana_gene "OTTMUSG00000046502.1";
mm10-chrY	HAVANA	transcript	77148730	77149422	.	-	.	gene_id "ENSMUSG00000101478.1"; transcript_id "ENSMUST00000187743.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20859"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20859-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046502.1"; havana_transcript "OTTMUST00000121007.1";
mm10-chrY	HAVANA	exon	77148730	77149422	.	-	.	gene_id "ENSMUSG00000101478.1"; transcript_id "ENSMUST00000187743.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20859"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20859-201"; exon_number 1; exon_id "ENSMUSE00001330387.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046502.1"; havana_transcript "OTTMUST00000121007.1";
mm10-chrY	HAVANA	gene	77178372	77178986	.	-	.	gene_id "ENSMUSG00000101283.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29314"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046503.1";
mm10-chrY	HAVANA	transcript	77178372	77178986	.	-	.	gene_id "ENSMUSG00000101283.1"; transcript_id "ENSMUST00000186800.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29314"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29314-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046503.1"; havana_transcript "OTTMUST00000121008.1";
mm10-chrY	HAVANA	exon	77178372	77178986	.	-	.	gene_id "ENSMUSG00000101283.1"; transcript_id "ENSMUST00000186800.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29314"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29314-201"; exon_number 1; exon_id "ENSMUSE00001334731.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046503.1"; havana_transcript "OTTMUST00000121008.1";
mm10-chrY	HAVANA	gene	77215227	77215922	.	-	.	gene_id "ENSMUSG00000100907.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29310"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046504.1";
mm10-chrY	HAVANA	transcript	77215227	77215922	.	-	.	gene_id "ENSMUSG00000100907.1"; transcript_id "ENSMUST00000185468.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29310"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29310-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046504.1"; havana_transcript "OTTMUST00000121009.1";
mm10-chrY	HAVANA	exon	77215227	77215922	.	-	.	gene_id "ENSMUSG00000100907.1"; transcript_id "ENSMUST00000185468.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29310"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29310-201"; exon_number 1; exon_id "ENSMUSE00001322166.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046504.1"; havana_transcript "OTTMUST00000121009.1";
mm10-chrY	HAVANA	gene	77257246	77260032	.	+	.	gene_id "ENSMUSG00000101960.1"; gene_type "lincRNA"; gene_name "Gm29311"; level 2; havana_gene "OTTMUSG00000046505.1";
mm10-chrY	HAVANA	transcript	77257246	77260032	.	+	.	gene_id "ENSMUSG00000101960.1"; transcript_id "ENSMUST00000189721.1"; gene_type "lincRNA"; gene_name "Gm29311"; transcript_type "lincRNA"; transcript_name "Gm29311-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046505.1"; havana_transcript "OTTMUST00000121010.1";
mm10-chrY	HAVANA	exon	77257246	77258104	.	+	.	gene_id "ENSMUSG00000101960.1"; transcript_id "ENSMUST00000189721.1"; gene_type "lincRNA"; gene_name "Gm29311"; transcript_type "lincRNA"; transcript_name "Gm29311-202"; exon_number 1; exon_id "ENSMUSE00001321545.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046505.1"; havana_transcript "OTTMUST00000121010.1";
mm10-chrY	HAVANA	exon	77258834	77259017	.	+	.	gene_id "ENSMUSG00000101960.1"; transcript_id "ENSMUST00000189721.1"; gene_type "lincRNA"; gene_name "Gm29311"; transcript_type "lincRNA"; transcript_name "Gm29311-202"; exon_number 2; exon_id "ENSMUSE00001330582.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046505.1"; havana_transcript "OTTMUST00000121010.1";
mm10-chrY	HAVANA	exon	77259544	77260032	.	+	.	gene_id "ENSMUSG00000101960.1"; transcript_id "ENSMUST00000189721.1"; gene_type "lincRNA"; gene_name "Gm29311"; transcript_type "lincRNA"; transcript_name "Gm29311-202"; exon_number 3; exon_id "ENSMUSE00001318289.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046505.1"; havana_transcript "OTTMUST00000121010.1";
mm10-chrY	HAVANA	transcript	77257917	77259608	.	+	.	gene_id "ENSMUSG00000101960.1"; transcript_id "ENSMUST00000189277.1"; gene_type "lincRNA"; gene_name "Gm29311"; transcript_type "lincRNA"; transcript_name "Gm29311-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046505.1"; havana_transcript "OTTMUST00000121011.1";
mm10-chrY	HAVANA	exon	77257917	77258104	.	+	.	gene_id "ENSMUSG00000101960.1"; transcript_id "ENSMUST00000189277.1"; gene_type "lincRNA"; gene_name "Gm29311"; transcript_type "lincRNA"; transcript_name "Gm29311-201"; exon_number 1; exon_id "ENSMUSE00001335323.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046505.1"; havana_transcript "OTTMUST00000121011.1";
mm10-chrY	HAVANA	exon	77259544	77259608	.	+	.	gene_id "ENSMUSG00000101960.1"; transcript_id "ENSMUST00000189277.1"; gene_type "lincRNA"; gene_name "Gm29311"; transcript_type "lincRNA"; transcript_name "Gm29311-201"; exon_number 2; exon_id "ENSMUSE00001332190.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046505.1"; havana_transcript "OTTMUST00000121011.1";
mm10-chrY	HAVANA	gene	77318999	77345251	.	+	.	gene_id "ENSMUSG00000095179.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21638"; level 2; havana_gene "OTTMUSG00000046506.1";
mm10-chrY	HAVANA	transcript	77318999	77345251	.	+	.	gene_id "ENSMUSG00000095179.2"; transcript_id "ENSMUST00000179473.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21638-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046506.1"; havana_transcript "OTTMUST00000121012.1";
mm10-chrY	HAVANA	exon	77318999	77319054	.	+	.	gene_id "ENSMUSG00000095179.2"; transcript_id "ENSMUST00000179473.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21638-201"; exon_number 1; exon_id "ENSMUSE00001319645.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046506.1"; havana_transcript "OTTMUST00000121012.1";
mm10-chrY	HAVANA	exon	77320413	77320547	.	+	.	gene_id "ENSMUSG00000095179.2"; transcript_id "ENSMUST00000179473.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21638-201"; exon_number 2; exon_id "ENSMUSE00001072467.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046506.1"; havana_transcript "OTTMUST00000121012.1";
mm10-chrY	HAVANA	exon	77325882	77325948	.	+	.	gene_id "ENSMUSG00000095179.2"; transcript_id "ENSMUST00000179473.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21638-201"; exon_number 3; exon_id "ENSMUSE00001002872.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046506.1"; havana_transcript "OTTMUST00000121012.1";
mm10-chrY	HAVANA	exon	77326619	77326653	.	+	.	gene_id "ENSMUSG00000095179.2"; transcript_id "ENSMUST00000179473.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21638-201"; exon_number 4; exon_id "ENSMUSE00001049030.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046506.1"; havana_transcript "OTTMUST00000121012.1";
mm10-chrY	HAVANA	exon	77341552	77341669	.	+	.	gene_id "ENSMUSG00000095179.2"; transcript_id "ENSMUST00000179473.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21638-201"; exon_number 5; exon_id "ENSMUSE00001084632.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046506.1"; havana_transcript "OTTMUST00000121012.1";
mm10-chrY	HAVANA	exon	77342424	77342523	.	+	.	gene_id "ENSMUSG00000095179.2"; transcript_id "ENSMUST00000179473.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21638-201"; exon_number 6; exon_id "ENSMUSE00001003901.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046506.1"; havana_transcript "OTTMUST00000121012.1";
mm10-chrY	HAVANA	exon	77344568	77344666	.	+	.	gene_id "ENSMUSG00000095179.2"; transcript_id "ENSMUST00000179473.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21638-201"; exon_number 7; exon_id "ENSMUSE00001030864.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046506.1"; havana_transcript "OTTMUST00000121012.1";
mm10-chrY	HAVANA	exon	77345026	77345251	.	+	.	gene_id "ENSMUSG00000095179.2"; transcript_id "ENSMUST00000179473.2"; gene_type "unprocessed_pseudogene"; gene_name "Gm21638"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21638-201"; exon_number 8; exon_id "ENSMUSE00001325759.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046506.1"; havana_transcript "OTTMUST00000121012.1";
mm10-chrY	HAVANA	gene	77406356	77407051	.	-	.	gene_id "ENSMUSG00000101917.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29312"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046507.1";
mm10-chrY	HAVANA	transcript	77406356	77407051	.	-	.	gene_id "ENSMUSG00000101917.1"; transcript_id "ENSMUST00000188724.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29312"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29312-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046507.1"; havana_transcript "OTTMUST00000121013.1";
mm10-chrY	HAVANA	exon	77406356	77407051	.	-	.	gene_id "ENSMUSG00000101917.1"; transcript_id "ENSMUST00000188724.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29312"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29312-201"; exon_number 1; exon_id "ENSMUSE00001320260.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046507.1"; havana_transcript "OTTMUST00000121013.1";
mm10-chrY	HAVANA	gene	77443200	77443514	.	-	.	gene_id "ENSMUSG00000101205.1"; gene_type "processed_pseudogene"; gene_name "Gm29308"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046508.1";
mm10-chrY	HAVANA	transcript	77443200	77443514	.	-	.	gene_id "ENSMUSG00000101205.1"; transcript_id "ENSMUST00000188863.1"; gene_type "processed_pseudogene"; gene_name "Gm29308"; transcript_type "processed_pseudogene"; transcript_name "Gm29308-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046508.1"; havana_transcript "OTTMUST00000121014.1";
mm10-chrY	HAVANA	exon	77443200	77443514	.	-	.	gene_id "ENSMUSG00000101205.1"; transcript_id "ENSMUST00000188863.1"; gene_type "processed_pseudogene"; gene_name "Gm29308"; transcript_type "processed_pseudogene"; transcript_name "Gm29308-201"; exon_number 1; exon_id "ENSMUSE00001322073.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046508.1"; havana_transcript "OTTMUST00000121014.1";
mm10-chrY	HAVANA	gene	77444923	77448266	.	-	.	gene_id "ENSMUSG00000100526.1"; gene_type "lincRNA"; gene_name "Gm29309"; level 2; havana_gene "OTTMUSG00000046509.1";
mm10-chrY	HAVANA	transcript	77444923	77448266	.	-	.	gene_id "ENSMUSG00000100526.1"; transcript_id "ENSMUST00000186251.1"; gene_type "lincRNA"; gene_name "Gm29309"; transcript_type "lincRNA"; transcript_name "Gm29309-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046509.1"; havana_transcript "OTTMUST00000121015.1";
mm10-chrY	HAVANA	exon	77448044	77448266	.	-	.	gene_id "ENSMUSG00000100526.1"; transcript_id "ENSMUST00000186251.1"; gene_type "lincRNA"; gene_name "Gm29309"; transcript_type "lincRNA"; transcript_name "Gm29309-201"; exon_number 1; exon_id "ENSMUSE00001326235.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046509.1"; havana_transcript "OTTMUST00000121015.1";
mm10-chrY	HAVANA	exon	77444923	77446865	.	-	.	gene_id "ENSMUSG00000100526.1"; transcript_id "ENSMUST00000186251.1"; gene_type "lincRNA"; gene_name "Gm29309"; transcript_type "lincRNA"; transcript_name "Gm29309-201"; exon_number 2; exon_id "ENSMUSE00001335998.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046509.1"; havana_transcript "OTTMUST00000121015.1";
mm10-chrY	HAVANA	gene	77476817	77481943	.	-	.	gene_id "ENSMUSG00000101785.1"; gene_type "lincRNA"; gene_name "Gm28702"; level 2; havana_gene "OTTMUSG00000046510.1";
mm10-chrY	HAVANA	transcript	77476817	77481943	.	-	.	gene_id "ENSMUSG00000101785.1"; transcript_id "ENSMUST00000188276.1"; gene_type "lincRNA"; gene_name "Gm28702"; transcript_type "lincRNA"; transcript_name "Gm28702-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046510.1"; havana_transcript "OTTMUST00000121016.1";
mm10-chrY	HAVANA	exon	77481783	77481943	.	-	.	gene_id "ENSMUSG00000101785.1"; transcript_id "ENSMUST00000188276.1"; gene_type "lincRNA"; gene_name "Gm28702"; transcript_type "lincRNA"; transcript_name "Gm28702-201"; exon_number 1; exon_id "ENSMUSE00001335973.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046510.1"; havana_transcript "OTTMUST00000121016.1";
mm10-chrY	HAVANA	exon	77476817	77476908	.	-	.	gene_id "ENSMUSG00000101785.1"; transcript_id "ENSMUST00000188276.1"; gene_type "lincRNA"; gene_name "Gm28702"; transcript_type "lincRNA"; transcript_name "Gm28702-201"; exon_number 2; exon_id "ENSMUSE00001319378.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046510.1"; havana_transcript "OTTMUST00000121016.1";
mm10-chrY	HAVANA	gene	77478913	77481137	.	+	.	gene_id "ENSMUSG00000100149.1"; gene_type "lincRNA"; gene_name "Gm28701"; level 2; havana_gene "OTTMUSG00000046511.1";
mm10-chrY	HAVANA	transcript	77478913	77481137	.	+	.	gene_id "ENSMUSG00000100149.1"; transcript_id "ENSMUST00000189778.1"; gene_type "lincRNA"; gene_name "Gm28701"; transcript_type "lincRNA"; transcript_name "Gm28701-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046511.1"; havana_transcript "OTTMUST00000121017.1";
mm10-chrY	HAVANA	exon	77478913	77479552	.	+	.	gene_id "ENSMUSG00000100149.1"; transcript_id "ENSMUST00000189778.1"; gene_type "lincRNA"; gene_name "Gm28701"; transcript_type "lincRNA"; transcript_name "Gm28701-201"; exon_number 1; exon_id "ENSMUSE00001320333.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046511.1"; havana_transcript "OTTMUST00000121017.1";
mm10-chrY	HAVANA	exon	77480038	77480223	.	+	.	gene_id "ENSMUSG00000100149.1"; transcript_id "ENSMUST00000189778.1"; gene_type "lincRNA"; gene_name "Gm28701"; transcript_type "lincRNA"; transcript_name "Gm28701-201"; exon_number 2; exon_id "ENSMUSE00001320766.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046511.1"; havana_transcript "OTTMUST00000121017.1";
mm10-chrY	HAVANA	exon	77480954	77481137	.	+	.	gene_id "ENSMUSG00000100149.1"; transcript_id "ENSMUST00000189778.1"; gene_type "lincRNA"; gene_name "Gm28701"; transcript_type "lincRNA"; transcript_name "Gm28701-201"; exon_number 3; exon_id "ENSMUSE00001326660.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046511.1"; havana_transcript "OTTMUST00000121017.1";
mm10-chrY	HAVANA	gene	77496199	77507125	.	+	.	gene_id "ENSMUSG00000101602.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28700"; level 2; havana_gene "OTTMUSG00000046512.1";
mm10-chrY	HAVANA	transcript	77496199	77507125	.	+	.	gene_id "ENSMUSG00000101602.1"; transcript_id "ENSMUST00000187614.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28700"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28700-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046512.1"; havana_transcript "OTTMUST00000121018.1";
mm10-chrY	HAVANA	exon	77496199	77496234	.	+	.	gene_id "ENSMUSG00000101602.1"; transcript_id "ENSMUST00000187614.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28700"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28700-201"; exon_number 1; exon_id "ENSMUSE00001333014.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046512.1"; havana_transcript "OTTMUST00000121018.1";
mm10-chrY	HAVANA	exon	77503405	77503522	.	+	.	gene_id "ENSMUSG00000101602.1"; transcript_id "ENSMUST00000187614.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28700"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28700-201"; exon_number 2; exon_id "ENSMUSE00001329838.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046512.1"; havana_transcript "OTTMUST00000121018.1";
mm10-chrY	HAVANA	exon	77504298	77504397	.	+	.	gene_id "ENSMUSG00000101602.1"; transcript_id "ENSMUST00000187614.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28700"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28700-201"; exon_number 3; exon_id "ENSMUSE00001335898.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046512.1"; havana_transcript "OTTMUST00000121018.1";
mm10-chrY	HAVANA	exon	77506442	77506540	.	+	.	gene_id "ENSMUSG00000101602.1"; transcript_id "ENSMUST00000187614.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28700"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28700-201"; exon_number 4; exon_id "ENSMUSE00001331729.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046512.1"; havana_transcript "OTTMUST00000121018.1";
mm10-chrY	HAVANA	exon	77506900	77507125	.	+	.	gene_id "ENSMUSG00000101602.1"; transcript_id "ENSMUST00000187614.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28700"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28700-201"; exon_number 5; exon_id "ENSMUSE00001324839.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046512.1"; havana_transcript "OTTMUST00000121018.1";
mm10-chrY	HAVANA	gene	77567319	77568014	.	-	.	gene_id "ENSMUSG00000099953.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28699"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046513.1";
mm10-chrY	HAVANA	transcript	77567319	77568014	.	-	.	gene_id "ENSMUSG00000099953.1"; transcript_id "ENSMUST00000189193.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28699"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28699-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046513.1"; havana_transcript "OTTMUST00000121019.1";
mm10-chrY	HAVANA	exon	77567319	77568014	.	-	.	gene_id "ENSMUSG00000099953.1"; transcript_id "ENSMUST00000189193.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28699"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28699-201"; exon_number 1; exon_id "ENSMUSE00001334488.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046513.1"; havana_transcript "OTTMUST00000121019.1";
mm10-chrY	HAVANA	gene	77604231	77604545	.	-	.	gene_id "ENSMUSG00000102032.1"; gene_type "processed_pseudogene"; gene_name "Gm28705"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046514.1";
mm10-chrY	HAVANA	transcript	77604231	77604545	.	-	.	gene_id "ENSMUSG00000102032.1"; transcript_id "ENSMUST00000189548.1"; gene_type "processed_pseudogene"; gene_name "Gm28705"; transcript_type "processed_pseudogene"; transcript_name "Gm28705-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046514.1"; havana_transcript "OTTMUST00000121020.1";
mm10-chrY	HAVANA	exon	77604231	77604545	.	-	.	gene_id "ENSMUSG00000102032.1"; transcript_id "ENSMUST00000189548.1"; gene_type "processed_pseudogene"; gene_name "Gm28705"; transcript_type "processed_pseudogene"; transcript_name "Gm28705-201"; exon_number 1; exon_id "ENSMUSE00001333224.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046514.1"; havana_transcript "OTTMUST00000121020.1";
mm10-chrY	HAVANA	gene	77605955	77609301	.	-	.	gene_id "ENSMUSG00000100823.1"; gene_type "lincRNA"; gene_name "Gm28704"; level 2; havana_gene "OTTMUSG00000046515.1";
mm10-chrY	HAVANA	transcript	77605955	77609301	.	-	.	gene_id "ENSMUSG00000100823.1"; transcript_id "ENSMUST00000186589.1"; gene_type "lincRNA"; gene_name "Gm28704"; transcript_type "lincRNA"; transcript_name "Gm28704-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046515.1"; havana_transcript "OTTMUST00000121021.1";
mm10-chrY	HAVANA	exon	77609079	77609301	.	-	.	gene_id "ENSMUSG00000100823.1"; transcript_id "ENSMUST00000186589.1"; gene_type "lincRNA"; gene_name "Gm28704"; transcript_type "lincRNA"; transcript_name "Gm28704-201"; exon_number 1; exon_id "ENSMUSE00001327720.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046515.1"; havana_transcript "OTTMUST00000121021.1";
mm10-chrY	HAVANA	exon	77605955	77607900	.	-	.	gene_id "ENSMUSG00000100823.1"; transcript_id "ENSMUST00000186589.1"; gene_type "lincRNA"; gene_name "Gm28704"; transcript_type "lincRNA"; transcript_name "Gm28704-201"; exon_number 2; exon_id "ENSMUSE00001332833.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046515.1"; havana_transcript "OTTMUST00000121021.1";
mm10-chrY	HAVANA	gene	77643677	77646914	.	+	.	gene_id "ENSMUSG00000099416.1"; gene_type "lincRNA"; gene_name "Gm28540"; level 2; havana_gene "OTTMUSG00000046544.1";
mm10-chrY	HAVANA	transcript	77643677	77646914	.	+	.	gene_id "ENSMUSG00000099416.1"; transcript_id "ENSMUST00000189573.1"; gene_type "lincRNA"; gene_name "Gm28540"; transcript_type "lincRNA"; transcript_name "Gm28540-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046544.1"; havana_transcript "OTTMUST00000121072.1";
mm10-chrY	HAVANA	exon	77643677	77644315	.	+	.	gene_id "ENSMUSG00000099416.1"; transcript_id "ENSMUST00000189573.1"; gene_type "lincRNA"; gene_name "Gm28540"; transcript_type "lincRNA"; transcript_name "Gm28540-202"; exon_number 1; exon_id "ENSMUSE00001322468.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046544.1"; havana_transcript "OTTMUST00000121072.1";
mm10-chrY	HAVANA	exon	77644801	77644986	.	+	.	gene_id "ENSMUSG00000099416.1"; transcript_id "ENSMUST00000189573.1"; gene_type "lincRNA"; gene_name "Gm28540"; transcript_type "lincRNA"; transcript_name "Gm28540-202"; exon_number 2; exon_id "ENSMUSE00001318625.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046544.1"; havana_transcript "OTTMUST00000121072.1";
mm10-chrY	HAVANA	exon	77645716	77645899	.	+	.	gene_id "ENSMUSG00000099416.1"; transcript_id "ENSMUST00000189573.1"; gene_type "lincRNA"; gene_name "Gm28540"; transcript_type "lincRNA"; transcript_name "Gm28540-202"; exon_number 3; exon_id "ENSMUSE00001330573.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046544.1"; havana_transcript "OTTMUST00000121072.1";
mm10-chrY	HAVANA	exon	77646426	77646914	.	+	.	gene_id "ENSMUSG00000099416.1"; transcript_id "ENSMUST00000189573.1"; gene_type "lincRNA"; gene_name "Gm28540"; transcript_type "lincRNA"; transcript_name "Gm28540-202"; exon_number 4; exon_id "ENSMUSE00001324911.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046544.1"; havana_transcript "OTTMUST00000121072.1";
mm10-chrY	HAVANA	transcript	77644130	77646494	.	+	.	gene_id "ENSMUSG00000099416.1"; transcript_id "ENSMUST00000188256.1"; gene_type "lincRNA"; gene_name "Gm28540"; transcript_type "lincRNA"; transcript_name "Gm28540-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046544.1"; havana_transcript "OTTMUST00000121073.1";
mm10-chrY	HAVANA	exon	77644130	77644315	.	+	.	gene_id "ENSMUSG00000099416.1"; transcript_id "ENSMUST00000188256.1"; gene_type "lincRNA"; gene_name "Gm28540"; transcript_type "lincRNA"; transcript_name "Gm28540-201"; exon_number 1; exon_id "ENSMUSE00001328596.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046544.1"; havana_transcript "OTTMUST00000121073.1";
mm10-chrY	HAVANA	exon	77644805	77644986	.	+	.	gene_id "ENSMUSG00000099416.1"; transcript_id "ENSMUST00000188256.1"; gene_type "lincRNA"; gene_name "Gm28540"; transcript_type "lincRNA"; transcript_name "Gm28540-201"; exon_number 2; exon_id "ENSMUSE00001321517.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046544.1"; havana_transcript "OTTMUST00000121073.1";
mm10-chrY	HAVANA	exon	77646426	77646494	.	+	.	gene_id "ENSMUSG00000099416.1"; transcript_id "ENSMUST00000188256.1"; gene_type "lincRNA"; gene_name "Gm28540"; transcript_type "lincRNA"; transcript_name "Gm28540-201"; exon_number 3; exon_id "ENSMUSE00001326297.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046544.1"; havana_transcript "OTTMUST00000121073.1";
mm10-chrY	HAVANA	gene	77692808	77719038	.	+	.	gene_id "ENSMUSG00000094647.7"; gene_type "protein_coding"; gene_name "Gm21650"; level 2; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	HAVANA	transcript	77692808	77719038	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	exon	77692808	77692851	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 1; exon_id "ENSMUSE00001333082.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	exon	77694218	77694349	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 2; exon_id "ENSMUSE00001318466.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	CDS	77694232	77694349	.	+	0	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 2; exon_id "ENSMUSE00001318466.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	start_codon	77694232	77694234	.	+	0	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 2; exon_id "ENSMUSE00001318466.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	exon	77699682	77699748	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 3; exon_id "ENSMUSE00001021902.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	CDS	77699682	77699748	.	+	2	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 3; exon_id "ENSMUSE00001021902.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	exon	77700411	77700445	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 4; exon_id "ENSMUSE00001085313.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	CDS	77700411	77700445	.	+	1	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 4; exon_id "ENSMUSE00001085313.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	exon	77707471	77707537	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 5; exon_id "ENSMUSE00001326342.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	CDS	77707471	77707537	.	+	2	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 5; exon_id "ENSMUSE00001326342.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	exon	77708120	77708154	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 6; exon_id "ENSMUSE00001321228.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	CDS	77708120	77708154	.	+	1	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 6; exon_id "ENSMUSE00001321228.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	exon	77715347	77715464	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 7; exon_id "ENSMUSE00001008944.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	CDS	77715347	77715464	.	+	2	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 7; exon_id "ENSMUSE00001008944.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	exon	77716227	77716326	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 8; exon_id "ENSMUSE00001040441.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	CDS	77716227	77716326	.	+	1	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 8; exon_id "ENSMUSE00001040441.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	exon	77718355	77718453	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 9; exon_id "ENSMUSE00001054054.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	CDS	77718355	77718453	.	+	0	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 9; exon_id "ENSMUSE00001054054.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	exon	77718813	77719038	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 10; exon_id "ENSMUSE00001323745.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	CDS	77718813	77718839	.	+	0	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 10; exon_id "ENSMUSE00001323745.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	stop_codon	77718840	77718842	.	+	0	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 10; exon_id "ENSMUSE00001323745.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	UTR	77692808	77692851	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 1; exon_id "ENSMUSE00001333082.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	UTR	77694218	77694231	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 2; exon_id "ENSMUSE00001318466.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	HAVANA	UTR	77718840	77719038	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000190551.6"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-202"; exon_number 10; exon_id "ENSMUSE00001323745.1"; level 2; protein_id "ENSMUSP00000141092.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046545.1"; havana_transcript "OTTMUST00000121074.1";
mm10-chrY	ENSEMBL	transcript	77694232	77718842	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	exon	77694232	77694349	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 1; exon_id "ENSMUSE00001009406.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	CDS	77694232	77694349	.	+	0	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 1; exon_id "ENSMUSE00001009406.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	start_codon	77694232	77694234	.	+	0	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 1; exon_id "ENSMUSE00001009406.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	exon	77699682	77699748	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 2; exon_id "ENSMUSE00001021902.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	CDS	77699682	77699748	.	+	2	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 2; exon_id "ENSMUSE00001021902.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	exon	77700411	77700445	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 3; exon_id "ENSMUSE00001085313.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	CDS	77700411	77700445	.	+	1	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 3; exon_id "ENSMUSE00001085313.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	exon	77715347	77715464	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 4; exon_id "ENSMUSE00001008944.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	CDS	77715347	77715464	.	+	2	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 4; exon_id "ENSMUSE00001008944.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	exon	77716227	77716326	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 5; exon_id "ENSMUSE00001040441.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	CDS	77716227	77716326	.	+	1	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 5; exon_id "ENSMUSE00001040441.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	exon	77718355	77718453	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 6; exon_id "ENSMUSE00001054054.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	CDS	77718355	77718453	.	+	0	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 6; exon_id "ENSMUSE00001054054.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	exon	77718813	77718842	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 7; exon_id "ENSMUSE00001018063.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	CDS	77718813	77718839	.	+	0	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 7; exon_id "ENSMUSE00001018063.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	stop_codon	77718840	77718842	.	+	0	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 7; exon_id "ENSMUSE00001018063.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	ENSEMBL	UTR	77718840	77718842	.	+	.	gene_id "ENSMUSG00000094647.7"; transcript_id "ENSMUST00000179073.1"; gene_type "protein_coding"; gene_name "Gm21650"; transcript_type "protein_coding"; transcript_name "Gm21650-201"; exon_number 7; exon_id "ENSMUSE00001018063.1"; level 3; protein_id "ENSMUSP00000137112.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046545.1";
mm10-chrY	HAVANA	gene	77751103	77752125	.	-	.	gene_id "ENSMUSG00000099646.1"; gene_type "lincRNA"; gene_name "Gm28541"; level 2; havana_gene "OTTMUSG00000046546.1";
mm10-chrY	HAVANA	transcript	77751103	77752125	.	-	.	gene_id "ENSMUSG00000099646.1"; transcript_id "ENSMUST00000185206.1"; gene_type "lincRNA"; gene_name "Gm28541"; transcript_type "lincRNA"; transcript_name "Gm28541-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046546.1"; havana_transcript "OTTMUST00000121075.1";
mm10-chrY	HAVANA	exon	77751855	77752125	.	-	.	gene_id "ENSMUSG00000099646.1"; transcript_id "ENSMUST00000185206.1"; gene_type "lincRNA"; gene_name "Gm28541"; transcript_type "lincRNA"; transcript_name "Gm28541-201"; exon_number 1; exon_id "ENSMUSE00001328945.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046546.1"; havana_transcript "OTTMUST00000121075.1";
mm10-chrY	HAVANA	exon	77751103	77751273	.	-	.	gene_id "ENSMUSG00000099646.1"; transcript_id "ENSMUST00000185206.1"; gene_type "lincRNA"; gene_name "Gm28541"; transcript_type "lincRNA"; transcript_name "Gm28541-201"; exon_number 2; exon_id "ENSMUSE00001336057.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046546.1"; havana_transcript "OTTMUST00000121075.1";
mm10-chrY	HAVANA	gene	77780148	77780843	.	-	.	gene_id "ENSMUSG00000099535.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28542"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046547.1";
mm10-chrY	HAVANA	transcript	77780148	77780843	.	-	.	gene_id "ENSMUSG00000099535.1"; transcript_id "ENSMUST00000185545.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28542"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28542-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046547.1"; havana_transcript "OTTMUST00000121076.1";
mm10-chrY	HAVANA	exon	77780148	77780843	.	-	.	gene_id "ENSMUSG00000099535.1"; transcript_id "ENSMUST00000185545.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28542"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28542-201"; exon_number 1; exon_id "ENSMUSE00001319511.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046547.1"; havana_transcript "OTTMUST00000121076.1";
mm10-chrY	HAVANA	gene	77817041	77817355	.	-	.	gene_id "ENSMUSG00000099606.1"; gene_type "processed_pseudogene"; gene_name "Gm28537"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046548.1";
mm10-chrY	HAVANA	transcript	77817041	77817355	.	-	.	gene_id "ENSMUSG00000099606.1"; transcript_id "ENSMUST00000189026.1"; gene_type "processed_pseudogene"; gene_name "Gm28537"; transcript_type "processed_pseudogene"; transcript_name "Gm28537-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046548.1"; havana_transcript "OTTMUST00000121077.1";
mm10-chrY	HAVANA	exon	77817041	77817355	.	-	.	gene_id "ENSMUSG00000099606.1"; transcript_id "ENSMUST00000189026.1"; gene_type "processed_pseudogene"; gene_name "Gm28537"; transcript_type "processed_pseudogene"; transcript_name "Gm28537-201"; exon_number 1; exon_id "ENSMUSE00001325082.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046548.1"; havana_transcript "OTTMUST00000121077.1";
mm10-chrY	HAVANA	gene	77818761	77822104	.	-	.	gene_id "ENSMUSG00000100063.1"; gene_type "lincRNA"; gene_name "Gm28538"; level 2; havana_gene "OTTMUSG00000046549.1";
mm10-chrY	HAVANA	transcript	77818761	77822104	.	-	.	gene_id "ENSMUSG00000100063.1"; transcript_id "ENSMUST00000190919.1"; gene_type "lincRNA"; gene_name "Gm28538"; transcript_type "lincRNA"; transcript_name "Gm28538-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046549.1"; havana_transcript "OTTMUST00000121078.1";
mm10-chrY	HAVANA	exon	77821882	77822104	.	-	.	gene_id "ENSMUSG00000100063.1"; transcript_id "ENSMUST00000190919.1"; gene_type "lincRNA"; gene_name "Gm28538"; transcript_type "lincRNA"; transcript_name "Gm28538-201"; exon_number 1; exon_id "ENSMUSE00001333298.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046549.1"; havana_transcript "OTTMUST00000121078.1";
mm10-chrY	HAVANA	exon	77818761	77820703	.	-	.	gene_id "ENSMUSG00000100063.1"; transcript_id "ENSMUST00000190919.1"; gene_type "lincRNA"; gene_name "Gm28538"; transcript_type "lincRNA"; transcript_name "Gm28538-201"; exon_number 2; exon_id "ENSMUSE00001330773.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046549.1"; havana_transcript "OTTMUST00000121078.1";
mm10-chrY	HAVANA	gene	77854094	77857332	.	+	.	gene_id "ENSMUSG00000100722.1"; gene_type "lincRNA"; gene_name "Gm29569"; level 2; havana_gene "OTTMUSG00000046550.1";
mm10-chrY	HAVANA	transcript	77854094	77857332	.	+	.	gene_id "ENSMUSG00000100722.1"; transcript_id "ENSMUST00000187955.1"; gene_type "lincRNA"; gene_name "Gm29569"; transcript_type "lincRNA"; transcript_name "Gm29569-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046550.1"; havana_transcript "OTTMUST00000121079.1";
mm10-chrY	HAVANA	exon	77854094	77854733	.	+	.	gene_id "ENSMUSG00000100722.1"; transcript_id "ENSMUST00000187955.1"; gene_type "lincRNA"; gene_name "Gm29569"; transcript_type "lincRNA"; transcript_name "Gm29569-202"; exon_number 1; exon_id "ENSMUSE00001328005.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046550.1"; havana_transcript "OTTMUST00000121079.1";
mm10-chrY	HAVANA	exon	77855219	77855404	.	+	.	gene_id "ENSMUSG00000100722.1"; transcript_id "ENSMUST00000187955.1"; gene_type "lincRNA"; gene_name "Gm29569"; transcript_type "lincRNA"; transcript_name "Gm29569-202"; exon_number 2; exon_id "ENSMUSE00001330149.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046550.1"; havana_transcript "OTTMUST00000121079.1";
mm10-chrY	HAVANA	exon	77856134	77856317	.	+	.	gene_id "ENSMUSG00000100722.1"; transcript_id "ENSMUST00000187955.1"; gene_type "lincRNA"; gene_name "Gm29569"; transcript_type "lincRNA"; transcript_name "Gm29569-202"; exon_number 3; exon_id "ENSMUSE00001319017.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046550.1"; havana_transcript "OTTMUST00000121079.1";
mm10-chrY	HAVANA	exon	77856844	77857332	.	+	.	gene_id "ENSMUSG00000100722.1"; transcript_id "ENSMUST00000187955.1"; gene_type "lincRNA"; gene_name "Gm29569"; transcript_type "lincRNA"; transcript_name "Gm29569-202"; exon_number 4; exon_id "ENSMUSE00001333155.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046550.1"; havana_transcript "OTTMUST00000121079.1";
mm10-chrY	HAVANA	transcript	77854547	77856912	.	+	.	gene_id "ENSMUSG00000100722.1"; transcript_id "ENSMUST00000187498.1"; gene_type "lincRNA"; gene_name "Gm29569"; transcript_type "lincRNA"; transcript_name "Gm29569-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046550.1"; havana_transcript "OTTMUST00000121080.1";
mm10-chrY	HAVANA	exon	77854547	77854733	.	+	.	gene_id "ENSMUSG00000100722.1"; transcript_id "ENSMUST00000187498.1"; gene_type "lincRNA"; gene_name "Gm29569"; transcript_type "lincRNA"; transcript_name "Gm29569-201"; exon_number 1; exon_id "ENSMUSE00001325375.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046550.1"; havana_transcript "OTTMUST00000121080.1";
mm10-chrY	HAVANA	exon	77855223	77855404	.	+	.	gene_id "ENSMUSG00000100722.1"; transcript_id "ENSMUST00000187498.1"; gene_type "lincRNA"; gene_name "Gm29569"; transcript_type "lincRNA"; transcript_name "Gm29569-201"; exon_number 2; exon_id "ENSMUSE00001329596.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046550.1"; havana_transcript "OTTMUST00000121080.1";
mm10-chrY	HAVANA	exon	77856844	77856912	.	+	.	gene_id "ENSMUSG00000100722.1"; transcript_id "ENSMUST00000187498.1"; gene_type "lincRNA"; gene_name "Gm29569"; transcript_type "lincRNA"; transcript_name "Gm29569-201"; exon_number 3; exon_id "ENSMUSE00001331649.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046550.1"; havana_transcript "OTTMUST00000121080.1";
mm10-chrY	HAVANA	gene	77960873	77963204	.	-	.	gene_id "ENSMUSG00000096898.2"; gene_type "protein_coding"; gene_name "Gm20867"; level 2; havana_gene "OTTMUSG00000046370.1";
mm10-chrY	HAVANA	transcript	77960873	77963204	.	-	.	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000190987.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-202"; level 2; protein_id "ENSMUSP00000139713.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1"; havana_transcript "OTTMUST00000120827.1";
mm10-chrY	HAVANA	exon	77963081	77963204	.	-	.	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000190987.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-202"; exon_number 1; exon_id "ENSMUSE00001328768.1"; level 2; protein_id "ENSMUSP00000139713.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1"; havana_transcript "OTTMUST00000120827.1";
mm10-chrY	HAVANA	exon	77960873	77961972	.	-	.	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000190987.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-202"; exon_number 2; exon_id "ENSMUSE00001334678.1"; level 2; protein_id "ENSMUSP00000139713.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1"; havana_transcript "OTTMUST00000120827.1";
mm10-chrY	HAVANA	CDS	77961010	77961690	.	-	0	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000190987.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-202"; exon_number 2; exon_id "ENSMUSE00001334678.1"; level 2; protein_id "ENSMUSP00000139713.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1"; havana_transcript "OTTMUST00000120827.1";
mm10-chrY	HAVANA	start_codon	77961688	77961690	.	-	0	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000190987.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-202"; exon_number 2; exon_id "ENSMUSE00001334678.1"; level 2; protein_id "ENSMUSP00000139713.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1"; havana_transcript "OTTMUST00000120827.1";
mm10-chrY	HAVANA	stop_codon	77961007	77961009	.	-	0	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000190987.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-202"; exon_number 2; exon_id "ENSMUSE00001334678.1"; level 2; protein_id "ENSMUSP00000139713.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1"; havana_transcript "OTTMUST00000120827.1";
mm10-chrY	HAVANA	UTR	77963081	77963204	.	-	.	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000190987.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-202"; exon_number 1; exon_id "ENSMUSE00001328768.1"; level 2; protein_id "ENSMUSP00000139713.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1"; havana_transcript "OTTMUST00000120827.1";
mm10-chrY	HAVANA	UTR	77960873	77961009	.	-	.	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000190987.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-202"; exon_number 2; exon_id "ENSMUSE00001334678.1"; level 2; protein_id "ENSMUSP00000139713.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1"; havana_transcript "OTTMUST00000120827.1";
mm10-chrY	HAVANA	UTR	77961691	77961972	.	-	.	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000190987.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-202"; exon_number 2; exon_id "ENSMUSE00001334678.1"; level 2; protein_id "ENSMUSP00000139713.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1"; havana_transcript "OTTMUST00000120827.1";
mm10-chrY	ENSEMBL	transcript	77961007	77961690	.	-	.	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000178900.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-201"; level 3; protein_id "ENSMUSP00000136459.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1";
mm10-chrY	ENSEMBL	exon	77961007	77961690	.	-	.	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000178900.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-201"; exon_number 1; exon_id "ENSMUSE00001066509.1"; level 3; protein_id "ENSMUSP00000136459.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1";
mm10-chrY	ENSEMBL	CDS	77961010	77961690	.	-	0	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000178900.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-201"; exon_number 1; exon_id "ENSMUSE00001066509.1"; level 3; protein_id "ENSMUSP00000136459.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1";
mm10-chrY	ENSEMBL	start_codon	77961688	77961690	.	-	0	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000178900.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-201"; exon_number 1; exon_id "ENSMUSE00001066509.1"; level 3; protein_id "ENSMUSP00000136459.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1";
mm10-chrY	ENSEMBL	stop_codon	77961007	77961009	.	-	0	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000178900.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-201"; exon_number 1; exon_id "ENSMUSE00001066509.1"; level 3; protein_id "ENSMUSP00000136459.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1";
mm10-chrY	ENSEMBL	UTR	77961007	77961009	.	-	.	gene_id "ENSMUSG00000096898.2"; transcript_id "ENSMUST00000178900.1"; gene_type "protein_coding"; gene_name "Gm20867"; transcript_type "protein_coding"; transcript_name "Gm20867-201"; exon_number 1; exon_id "ENSMUSE00001066509.1"; level 3; protein_id "ENSMUSP00000136459.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85904.1"; havana_gene "OTTMUSG00000046370.1";
mm10-chrY	HAVANA	gene	78035019	78035714	.	-	.	gene_id "ENSMUSG00000101017.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21658"; level 2; havana_gene "OTTMUSG00000046551.1";
mm10-chrY	HAVANA	transcript	78035019	78035714	.	-	.	gene_id "ENSMUSG00000101017.1"; transcript_id "ENSMUST00000190025.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21658"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21658-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046551.1"; havana_transcript "OTTMUST00000121081.1";
mm10-chrY	HAVANA	exon	78035019	78035714	.	-	.	gene_id "ENSMUSG00000101017.1"; transcript_id "ENSMUST00000190025.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21658"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21658-201"; exon_number 1; exon_id "ENSMUSE00001332834.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046551.1"; havana_transcript "OTTMUST00000121081.1";
mm10-chrY	HAVANA	gene	78052004	78053545	.	+	.	gene_id "ENSMUSG00000100366.1"; gene_type "lincRNA"; gene_name "Gm29568"; level 2; havana_gene "OTTMUSG00000046552.1";
mm10-chrY	HAVANA	transcript	78052004	78053545	.	+	.	gene_id "ENSMUSG00000100366.1"; transcript_id "ENSMUST00000187884.1"; gene_type "lincRNA"; gene_name "Gm29568"; transcript_type "lincRNA"; transcript_name "Gm29568-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046552.1"; havana_transcript "OTTMUST00000121082.1";
mm10-chrY	HAVANA	exon	78052004	78052221	.	+	.	gene_id "ENSMUSG00000100366.1"; transcript_id "ENSMUST00000187884.1"; gene_type "lincRNA"; gene_name "Gm29568"; transcript_type "lincRNA"; transcript_name "Gm29568-201"; exon_number 1; exon_id "ENSMUSE00001334303.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046552.1"; havana_transcript "OTTMUST00000121082.1";
mm10-chrY	HAVANA	exon	78053408	78053545	.	+	.	gene_id "ENSMUSG00000100366.1"; transcript_id "ENSMUST00000187884.1"; gene_type "lincRNA"; gene_name "Gm29568"; transcript_type "lincRNA"; transcript_name "Gm29568-201"; exon_number 2; exon_id "ENSMUSE00001333973.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046552.1"; havana_transcript "OTTMUST00000121082.1";
mm10-chrY	HAVANA	gene	78064684	78065298	.	-	.	gene_id "ENSMUSG00000100888.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29567"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046553.1";
mm10-chrY	HAVANA	transcript	78064684	78065298	.	-	.	gene_id "ENSMUSG00000100888.1"; transcript_id "ENSMUST00000191188.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29567"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29567-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046553.1"; havana_transcript "OTTMUST00000121083.1";
mm10-chrY	HAVANA	exon	78064684	78065298	.	-	.	gene_id "ENSMUSG00000100888.1"; transcript_id "ENSMUST00000191188.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29567"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29567-201"; exon_number 1; exon_id "ENSMUSE00001332352.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046553.1"; havana_transcript "OTTMUST00000121083.1";
mm10-chrY	HAVANA	gene	78101505	78102200	.	-	.	gene_id "ENSMUSG00000100433.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21198"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046554.1";
mm10-chrY	HAVANA	transcript	78101505	78102200	.	-	.	gene_id "ENSMUSG00000100433.1"; transcript_id "ENSMUST00000188393.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21198"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21198-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046554.1"; havana_transcript "OTTMUST00000121084.1";
mm10-chrY	HAVANA	exon	78101505	78102200	.	-	.	gene_id "ENSMUSG00000100433.1"; transcript_id "ENSMUST00000188393.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21198"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21198-201"; exon_number 1; exon_id "ENSMUSE00001322919.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046554.1"; havana_transcript "OTTMUST00000121084.1";
mm10-chrY	HAVANA	gene	78147088	78157505	.	-	.	gene_id "ENSMUSG00000102111.1"; gene_type "lincRNA"; gene_name "Gm29566"; level 2; havana_gene "OTTMUSG00000046555.1";
mm10-chrY	HAVANA	transcript	78147088	78157505	.	-	.	gene_id "ENSMUSG00000102111.1"; transcript_id "ENSMUST00000190627.1"; gene_type "lincRNA"; gene_name "Gm29566"; transcript_type "lincRNA"; transcript_name "Gm29566-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046555.1"; havana_transcript "OTTMUST00000121085.1";
mm10-chrY	HAVANA	exon	78157446	78157505	.	-	.	gene_id "ENSMUSG00000102111.1"; transcript_id "ENSMUST00000190627.1"; gene_type "lincRNA"; gene_name "Gm29566"; transcript_type "lincRNA"; transcript_name "Gm29566-201"; exon_number 1; exon_id "ENSMUSE00001327120.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046555.1"; havana_transcript "OTTMUST00000121085.1";
mm10-chrY	HAVANA	exon	78153722	78153863	.	-	.	gene_id "ENSMUSG00000102111.1"; transcript_id "ENSMUST00000190627.1"; gene_type "lincRNA"; gene_name "Gm29566"; transcript_type "lincRNA"; transcript_name "Gm29566-201"; exon_number 2; exon_id "ENSMUSE00001331812.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046555.1"; havana_transcript "OTTMUST00000121085.1";
mm10-chrY	HAVANA	exon	78148682	78148773	.	-	.	gene_id "ENSMUSG00000102111.1"; transcript_id "ENSMUST00000190627.1"; gene_type "lincRNA"; gene_name "Gm29566"; transcript_type "lincRNA"; transcript_name "Gm29566-201"; exon_number 3; exon_id "ENSMUSE00001325459.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046555.1"; havana_transcript "OTTMUST00000121085.1";
mm10-chrY	HAVANA	exon	78147088	78147250	.	-	.	gene_id "ENSMUSG00000102111.1"; transcript_id "ENSMUST00000190627.1"; gene_type "lincRNA"; gene_name "Gm29566"; transcript_type "lincRNA"; transcript_name "Gm29566-201"; exon_number 4; exon_id "ENSMUSE00001322838.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046555.1"; havana_transcript "OTTMUST00000121085.1";
mm10-chrY	HAVANA	gene	78150852	78154091	.	+	.	gene_id "ENSMUSG00000101060.1"; gene_type "lincRNA"; gene_name "Gm29565"; level 2; havana_gene "OTTMUSG00000046556.1";
mm10-chrY	HAVANA	transcript	78150852	78154091	.	+	.	gene_id "ENSMUSG00000101060.1"; transcript_id "ENSMUST00000186260.1"; gene_type "lincRNA"; gene_name "Gm29565"; transcript_type "lincRNA"; transcript_name "Gm29565-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046556.1"; havana_transcript "OTTMUST00000121086.1";
mm10-chrY	HAVANA	exon	78150852	78151491	.	+	.	gene_id "ENSMUSG00000101060.1"; transcript_id "ENSMUST00000186260.1"; gene_type "lincRNA"; gene_name "Gm29565"; transcript_type "lincRNA"; transcript_name "Gm29565-202"; exon_number 1; exon_id "ENSMUSE00001323562.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046556.1"; havana_transcript "OTTMUST00000121086.1";
mm10-chrY	HAVANA	exon	78151977	78152162	.	+	.	gene_id "ENSMUSG00000101060.1"; transcript_id "ENSMUST00000186260.1"; gene_type "lincRNA"; gene_name "Gm29565"; transcript_type "lincRNA"; transcript_name "Gm29565-202"; exon_number 2; exon_id "ENSMUSE00001327090.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046556.1"; havana_transcript "OTTMUST00000121086.1";
mm10-chrY	HAVANA	exon	78152892	78153075	.	+	.	gene_id "ENSMUSG00000101060.1"; transcript_id "ENSMUST00000186260.1"; gene_type "lincRNA"; gene_name "Gm29565"; transcript_type "lincRNA"; transcript_name "Gm29565-202"; exon_number 3; exon_id "ENSMUSE00001320996.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046556.1"; havana_transcript "OTTMUST00000121086.1";
mm10-chrY	HAVANA	exon	78153603	78154091	.	+	.	gene_id "ENSMUSG00000101060.1"; transcript_id "ENSMUST00000186260.1"; gene_type "lincRNA"; gene_name "Gm29565"; transcript_type "lincRNA"; transcript_name "Gm29565-202"; exon_number 4; exon_id "ENSMUSE00001318667.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046556.1"; havana_transcript "OTTMUST00000121086.1";
mm10-chrY	HAVANA	transcript	78151305	78153671	.	+	.	gene_id "ENSMUSG00000101060.1"; transcript_id "ENSMUST00000185255.1"; gene_type "lincRNA"; gene_name "Gm29565"; transcript_type "lincRNA"; transcript_name "Gm29565-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046556.1"; havana_transcript "OTTMUST00000121087.1";
mm10-chrY	HAVANA	exon	78151305	78151491	.	+	.	gene_id "ENSMUSG00000101060.1"; transcript_id "ENSMUST00000185255.1"; gene_type "lincRNA"; gene_name "Gm29565"; transcript_type "lincRNA"; transcript_name "Gm29565-201"; exon_number 1; exon_id "ENSMUSE00001323426.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046556.1"; havana_transcript "OTTMUST00000121087.1";
mm10-chrY	HAVANA	exon	78151981	78152162	.	+	.	gene_id "ENSMUSG00000101060.1"; transcript_id "ENSMUST00000185255.1"; gene_type "lincRNA"; gene_name "Gm29565"; transcript_type "lincRNA"; transcript_name "Gm29565-201"; exon_number 2; exon_id "ENSMUSE00001324619.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046556.1"; havana_transcript "OTTMUST00000121087.1";
mm10-chrY	HAVANA	exon	78153603	78153671	.	+	.	gene_id "ENSMUSG00000101060.1"; transcript_id "ENSMUST00000185255.1"; gene_type "lincRNA"; gene_name "Gm29565"; transcript_type "lincRNA"; transcript_name "Gm29565-201"; exon_number 3; exon_id "ENSMUSE00001332897.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046556.1"; havana_transcript "OTTMUST00000121087.1";
mm10-chrY	HAVANA	gene	78212993	78239189	.	+	.	gene_id "ENSMUSG00000099792.1"; gene_type "protein_coding"; gene_name "Gm29564"; level 2; havana_gene "OTTMUSG00000046557.1";
mm10-chrY	HAVANA	transcript	78212993	78239189	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	exon	78212993	78213036	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 1; exon_id "ENSMUSE00001332653.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	exon	78214402	78214533	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 2; exon_id "ENSMUSE00001328453.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	CDS	78214416	78214533	.	+	0	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 2; exon_id "ENSMUSE00001328453.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	start_codon	78214416	78214418	.	+	0	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 2; exon_id "ENSMUSE00001328453.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	exon	78219840	78219906	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 3; exon_id "ENSMUSE00001333295.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	CDS	78219840	78219906	.	+	2	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 3; exon_id "ENSMUSE00001333295.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	exon	78220576	78220610	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 4; exon_id "ENSMUSE00001326781.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	CDS	78220576	78220610	.	+	1	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 4; exon_id "ENSMUSE00001326781.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	exon	78227645	78227711	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 5; exon_id "ENSMUSE00001332829.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	CDS	78227645	78227711	.	+	2	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 5; exon_id "ENSMUSE00001332829.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	exon	78228288	78228322	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 6; exon_id "ENSMUSE00001330159.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	CDS	78228288	78228322	.	+	1	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 6; exon_id "ENSMUSE00001330159.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	exon	78235488	78235605	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 7; exon_id "ENSMUSE00001326993.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	CDS	78235488	78235605	.	+	2	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 7; exon_id "ENSMUSE00001326993.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	exon	78236373	78236472	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 8; exon_id "ENSMUSE00001319059.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	CDS	78236373	78236472	.	+	1	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 8; exon_id "ENSMUSE00001319059.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	exon	78238506	78238604	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 9; exon_id "ENSMUSE00001335331.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	CDS	78238506	78238604	.	+	0	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 9; exon_id "ENSMUSE00001335331.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	exon	78238964	78239189	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 10; exon_id "ENSMUSE00001324134.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	CDS	78238964	78238990	.	+	0	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 10; exon_id "ENSMUSE00001324134.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	stop_codon	78238991	78238993	.	+	0	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 10; exon_id "ENSMUSE00001324134.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	UTR	78212993	78213036	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 1; exon_id "ENSMUSE00001332653.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	UTR	78214402	78214415	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 2; exon_id "ENSMUSE00001328453.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	UTR	78238991	78239189	.	+	.	gene_id "ENSMUSG00000099792.1"; transcript_id "ENSMUST00000185575.1"; gene_type "protein_coding"; gene_name "Gm29564"; transcript_type "protein_coding"; transcript_name "Gm29564-201"; exon_number 10; exon_id "ENSMUSE00001324134.1"; level 2; protein_id "ENSMUSP00000139621.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046557.1"; havana_transcript "OTTMUST00000121088.1";
mm10-chrY	HAVANA	gene	78323566	78323880	.	-	.	gene_id "ENSMUSG00000099497.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29147"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046570.1";
mm10-chrY	HAVANA	transcript	78323566	78323880	.	-	.	gene_id "ENSMUSG00000099497.1"; transcript_id "ENSMUST00000186846.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29147"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29147-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046570.1"; havana_transcript "OTTMUST00000121105.1";
mm10-chrY	HAVANA	exon	78323566	78323880	.	-	.	gene_id "ENSMUSG00000099497.1"; transcript_id "ENSMUST00000186846.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29147"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29147-201"; exon_number 1; exon_id "ENSMUSE00001334742.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046570.1"; havana_transcript "OTTMUST00000121105.1";
mm10-chrY	HAVANA	gene	78325294	78328635	.	-	.	gene_id "ENSMUSG00000099479.1"; gene_type "lincRNA"; gene_name "Gm29146"; level 2; havana_gene "OTTMUSG00000046571.1";
mm10-chrY	HAVANA	transcript	78325294	78328635	.	-	.	gene_id "ENSMUSG00000099479.1"; transcript_id "ENSMUST00000188904.1"; gene_type "lincRNA"; gene_name "Gm29146"; transcript_type "lincRNA"; transcript_name "Gm29146-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046571.1"; havana_transcript "OTTMUST00000121106.1";
mm10-chrY	HAVANA	exon	78328413	78328635	.	-	.	gene_id "ENSMUSG00000099479.1"; transcript_id "ENSMUST00000188904.1"; gene_type "lincRNA"; gene_name "Gm29146"; transcript_type "lincRNA"; transcript_name "Gm29146-201"; exon_number 1; exon_id "ENSMUSE00001325286.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046571.1"; havana_transcript "OTTMUST00000121106.1";
mm10-chrY	HAVANA	exon	78325294	78327235	.	-	.	gene_id "ENSMUSG00000099479.1"; transcript_id "ENSMUST00000188904.1"; gene_type "lincRNA"; gene_name "Gm29146"; transcript_type "lincRNA"; transcript_name "Gm29146-201"; exon_number 2; exon_id "ENSMUSE00001335935.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046571.1"; havana_transcript "OTTMUST00000121106.1";
mm10-chrY	HAVANA	gene	78356809	78367279	.	-	.	gene_id "ENSMUSG00000101115.1"; gene_type "lincRNA"; gene_name "Gm28664"; level 2; havana_gene "OTTMUSG00000046598.1";
mm10-chrY	HAVANA	transcript	78356809	78367279	.	-	.	gene_id "ENSMUSG00000101115.1"; transcript_id "ENSMUST00000186118.1"; gene_type "lincRNA"; gene_name "Gm28664"; transcript_type "lincRNA"; transcript_name "Gm28664-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046598.1"; havana_transcript "OTTMUST00000121157.1";
mm10-chrY	HAVANA	exon	78367220	78367279	.	-	.	gene_id "ENSMUSG00000101115.1"; transcript_id "ENSMUST00000186118.1"; gene_type "lincRNA"; gene_name "Gm28664"; transcript_type "lincRNA"; transcript_name "Gm28664-201"; exon_number 1; exon_id "ENSMUSE00001334944.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046598.1"; havana_transcript "OTTMUST00000121157.1";
mm10-chrY	HAVANA	exon	78363496	78363637	.	-	.	gene_id "ENSMUSG00000101115.1"; transcript_id "ENSMUST00000186118.1"; gene_type "lincRNA"; gene_name "Gm28664"; transcript_type "lincRNA"; transcript_name "Gm28664-201"; exon_number 2; exon_id "ENSMUSE00001330200.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046598.1"; havana_transcript "OTTMUST00000121157.1";
mm10-chrY	HAVANA	exon	78358369	78358460	.	-	.	gene_id "ENSMUSG00000101115.1"; transcript_id "ENSMUST00000186118.1"; gene_type "lincRNA"; gene_name "Gm28664"; transcript_type "lincRNA"; transcript_name "Gm28664-201"; exon_number 3; exon_id "ENSMUSE00001325258.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046598.1"; havana_transcript "OTTMUST00000121157.1";
mm10-chrY	HAVANA	exon	78356809	78356971	.	-	.	gene_id "ENSMUSG00000101115.1"; transcript_id "ENSMUST00000186118.1"; gene_type "lincRNA"; gene_name "Gm28664"; transcript_type "lincRNA"; transcript_name "Gm28664-201"; exon_number 4; exon_id "ENSMUSE00001323280.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046598.1"; havana_transcript "OTTMUST00000121157.1";
mm10-chrY	HAVANA	gene	78360628	78363865	.	+	.	gene_id "ENSMUSG00000100849.1"; gene_type "lincRNA"; gene_name "Gm28663"; level 2; havana_gene "OTTMUSG00000046599.1";
mm10-chrY	HAVANA	transcript	78360628	78363865	.	+	.	gene_id "ENSMUSG00000100849.1"; transcript_id "ENSMUST00000186567.1"; gene_type "lincRNA"; gene_name "Gm28663"; transcript_type "lincRNA"; transcript_name "Gm28663-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046599.1"; havana_transcript "OTTMUST00000121158.1";
mm10-chrY	HAVANA	exon	78360628	78361266	.	+	.	gene_id "ENSMUSG00000100849.1"; transcript_id "ENSMUST00000186567.1"; gene_type "lincRNA"; gene_name "Gm28663"; transcript_type "lincRNA"; transcript_name "Gm28663-201"; exon_number 1; exon_id "ENSMUSE00001327442.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046599.1"; havana_transcript "OTTMUST00000121158.1";
mm10-chrY	HAVANA	exon	78361752	78361937	.	+	.	gene_id "ENSMUSG00000100849.1"; transcript_id "ENSMUST00000186567.1"; gene_type "lincRNA"; gene_name "Gm28663"; transcript_type "lincRNA"; transcript_name "Gm28663-201"; exon_number 2; exon_id "ENSMUSE00001331373.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046599.1"; havana_transcript "OTTMUST00000121158.1";
mm10-chrY	HAVANA	exon	78362667	78362850	.	+	.	gene_id "ENSMUSG00000100849.1"; transcript_id "ENSMUST00000186567.1"; gene_type "lincRNA"; gene_name "Gm28663"; transcript_type "lincRNA"; transcript_name "Gm28663-201"; exon_number 3; exon_id "ENSMUSE00001328926.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046599.1"; havana_transcript "OTTMUST00000121158.1";
mm10-chrY	HAVANA	exon	78363377	78363865	.	+	.	gene_id "ENSMUSG00000100849.1"; transcript_id "ENSMUST00000186567.1"; gene_type "lincRNA"; gene_name "Gm28663"; transcript_type "lincRNA"; transcript_name "Gm28663-201"; exon_number 4; exon_id "ENSMUSE00001324344.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046599.1"; havana_transcript "OTTMUST00000121158.1";
mm10-chrY	HAVANA	transcript	78361081	78363445	.	+	.	gene_id "ENSMUSG00000100849.1"; transcript_id "ENSMUST00000189180.1"; gene_type "lincRNA"; gene_name "Gm28663"; transcript_type "lincRNA"; transcript_name "Gm28663-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046599.1"; havana_transcript "OTTMUST00000121159.1";
mm10-chrY	HAVANA	exon	78361081	78361266	.	+	.	gene_id "ENSMUSG00000100849.1"; transcript_id "ENSMUST00000189180.1"; gene_type "lincRNA"; gene_name "Gm28663"; transcript_type "lincRNA"; transcript_name "Gm28663-202"; exon_number 1; exon_id "ENSMUSE00001333060.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046599.1"; havana_transcript "OTTMUST00000121159.1";
mm10-chrY	HAVANA	exon	78361756	78361937	.	+	.	gene_id "ENSMUSG00000100849.1"; transcript_id "ENSMUST00000189180.1"; gene_type "lincRNA"; gene_name "Gm28663"; transcript_type "lincRNA"; transcript_name "Gm28663-202"; exon_number 2; exon_id "ENSMUSE00001318130.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046599.1"; havana_transcript "OTTMUST00000121159.1";
mm10-chrY	HAVANA	exon	78363377	78363445	.	+	.	gene_id "ENSMUSG00000100849.1"; transcript_id "ENSMUST00000189180.1"; gene_type "lincRNA"; gene_name "Gm28663"; transcript_type "lincRNA"; transcript_name "Gm28663-202"; exon_number 3; exon_id "ENSMUSE00001331382.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046599.1"; havana_transcript "OTTMUST00000121159.1";
mm10-chrY	HAVANA	gene	78471258	78471953	.	-	.	gene_id "ENSMUSG00000101194.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29149"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046572.1";
mm10-chrY	HAVANA	transcript	78471258	78471953	.	-	.	gene_id "ENSMUSG00000101194.1"; transcript_id "ENSMUST00000191590.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29149"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29149-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046572.1"; havana_transcript "OTTMUST00000121107.1";
mm10-chrY	HAVANA	exon	78471258	78471953	.	-	.	gene_id "ENSMUSG00000101194.1"; transcript_id "ENSMUST00000191590.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29149"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29149-201"; exon_number 1; exon_id "ENSMUSE00001324616.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046572.1"; havana_transcript "OTTMUST00000121107.1";
mm10-chrY	HAVANA	gene	78545906	78546241	.	-	.	gene_id "ENSMUSG00000099742.1"; gene_type "processed_pseudogene"; gene_name "Gm29148"; level 2; havana_gene "OTTMUSG00000046573.1";
mm10-chrY	HAVANA	transcript	78545906	78546241	.	-	.	gene_id "ENSMUSG00000099742.1"; transcript_id "ENSMUST00000188140.1"; gene_type "processed_pseudogene"; gene_name "Gm29148"; transcript_type "processed_pseudogene"; transcript_name "Gm29148-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000046573.1"; havana_transcript "OTTMUST00000121108.1";
mm10-chrY	HAVANA	exon	78545906	78546241	.	-	.	gene_id "ENSMUSG00000099742.1"; transcript_id "ENSMUST00000188140.1"; gene_type "processed_pseudogene"; gene_name "Gm29148"; transcript_type "processed_pseudogene"; transcript_name "Gm29148-201"; exon_number 1; exon_id "ENSMUSE00001326116.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000046573.1"; havana_transcript "OTTMUST00000121108.1";
mm10-chrY	HAVANA	gene	78573401	78573856	.	-	.	gene_id "ENSMUSG00000100999.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29145"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046574.1";
mm10-chrY	HAVANA	transcript	78573401	78573856	.	-	.	gene_id "ENSMUSG00000100999.1"; transcript_id "ENSMUST00000189914.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29145"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29145-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046574.1"; havana_transcript "OTTMUST00000121109.1";
mm10-chrY	HAVANA	exon	78573401	78573856	.	-	.	gene_id "ENSMUSG00000100999.1"; transcript_id "ENSMUST00000189914.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29145"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29145-201"; exon_number 1; exon_id "ENSMUSE00001322776.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046574.1"; havana_transcript "OTTMUST00000121109.1";
mm10-chrY	HAVANA	gene	78609396	78609734	.	-	.	gene_id "ENSMUSG00000101562.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29144"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046575.1";
mm10-chrY	HAVANA	transcript	78609396	78609734	.	-	.	gene_id "ENSMUSG00000101562.1"; transcript_id "ENSMUST00000189235.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29144"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29144-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046575.1"; havana_transcript "OTTMUST00000121110.1";
mm10-chrY	HAVANA	exon	78609396	78609734	.	-	.	gene_id "ENSMUSG00000101562.1"; transcript_id "ENSMUST00000189235.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29144"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29144-201"; exon_number 1; exon_id "ENSMUSE00001325839.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046575.1"; havana_transcript "OTTMUST00000121110.1";
mm10-chrY	HAVANA	gene	78632526	78657490	.	-	.	gene_id "ENSMUSG00000101321.1"; gene_type "lincRNA"; gene_name "Gm28817"; level 2; havana_gene "OTTMUSG00000046600.1";
mm10-chrY	HAVANA	transcript	78632526	78657490	.	-	.	gene_id "ENSMUSG00000101321.1"; transcript_id "ENSMUST00000187598.1"; gene_type "lincRNA"; gene_name "Gm28817"; transcript_type "lincRNA"; transcript_name "Gm28817-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046600.1"; havana_transcript "OTTMUST00000121160.1";
mm10-chrY	HAVANA	exon	78657431	78657490	.	-	.	gene_id "ENSMUSG00000101321.1"; transcript_id "ENSMUST00000187598.1"; gene_type "lincRNA"; gene_name "Gm28817"; transcript_type "lincRNA"; transcript_name "Gm28817-201"; exon_number 1; exon_id "ENSMUSE00001319505.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046600.1"; havana_transcript "OTTMUST00000121160.1";
mm10-chrY	HAVANA	exon	78653684	78653825	.	-	.	gene_id "ENSMUSG00000101321.1"; transcript_id "ENSMUST00000187598.1"; gene_type "lincRNA"; gene_name "Gm28817"; transcript_type "lincRNA"; transcript_name "Gm28817-201"; exon_number 2; exon_id "ENSMUSE00001324241.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046600.1"; havana_transcript "OTTMUST00000121160.1";
mm10-chrY	HAVANA	exon	78649047	78649138	.	-	.	gene_id "ENSMUSG00000101321.1"; transcript_id "ENSMUST00000187598.1"; gene_type "lincRNA"; gene_name "Gm28817"; transcript_type "lincRNA"; transcript_name "Gm28817-201"; exon_number 3; exon_id "ENSMUSE00001319516.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046600.1"; havana_transcript "OTTMUST00000121160.1";
mm10-chrY	HAVANA	exon	78647497	78647650	.	-	.	gene_id "ENSMUSG00000101321.1"; transcript_id "ENSMUST00000187598.1"; gene_type "lincRNA"; gene_name "Gm28817"; transcript_type "lincRNA"; transcript_name "Gm28817-201"; exon_number 4; exon_id "ENSMUSE00001333607.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046600.1"; havana_transcript "OTTMUST00000121160.1";
mm10-chrY	HAVANA	exon	78634152	78634304	.	-	.	gene_id "ENSMUSG00000101321.1"; transcript_id "ENSMUST00000187598.1"; gene_type "lincRNA"; gene_name "Gm28817"; transcript_type "lincRNA"; transcript_name "Gm28817-201"; exon_number 5; exon_id "ENSMUSE00001334428.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046600.1"; havana_transcript "OTTMUST00000121160.1";
mm10-chrY	HAVANA	exon	78632526	78632754	.	-	.	gene_id "ENSMUSG00000101321.1"; transcript_id "ENSMUST00000187598.1"; gene_type "lincRNA"; gene_name "Gm28817"; transcript_type "lincRNA"; transcript_name "Gm28817-201"; exon_number 6; exon_id "ENSMUSE00001331479.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046600.1"; havana_transcript "OTTMUST00000121160.1";
mm10-chrY	HAVANA	gene	78651259	78654053	.	+	.	gene_id "ENSMUSG00000100328.6"; gene_type "lincRNA"; gene_name "Gm28816"; level 2; havana_gene "OTTMUSG00000046601.1";
mm10-chrY	HAVANA	transcript	78651259	78654053	.	+	.	gene_id "ENSMUSG00000100328.6"; transcript_id "ENSMUST00000189686.6"; gene_type "lincRNA"; gene_name "Gm28816"; transcript_type "lincRNA"; transcript_name "Gm28816-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046601.1"; havana_transcript "OTTMUST00000121161.1";
mm10-chrY	HAVANA	exon	78651259	78651855	.	+	.	gene_id "ENSMUSG00000100328.6"; transcript_id "ENSMUST00000189686.6"; gene_type "lincRNA"; gene_name "Gm28816"; transcript_type "lincRNA"; transcript_name "Gm28816-202"; exon_number 1; exon_id "ENSMUSE00001335192.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046601.1"; havana_transcript "OTTMUST00000121161.1";
mm10-chrY	HAVANA	exon	78651898	78652125	.	+	.	gene_id "ENSMUSG00000100328.6"; transcript_id "ENSMUST00000189686.6"; gene_type "lincRNA"; gene_name "Gm28816"; transcript_type "lincRNA"; transcript_name "Gm28816-202"; exon_number 2; exon_id "ENSMUSE00001330415.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046601.1"; havana_transcript "OTTMUST00000121161.1";
mm10-chrY	HAVANA	exon	78652855	78653038	.	+	.	gene_id "ENSMUSG00000100328.6"; transcript_id "ENSMUST00000189686.6"; gene_type "lincRNA"; gene_name "Gm28816"; transcript_type "lincRNA"; transcript_name "Gm28816-202"; exon_number 3; exon_id "ENSMUSE00001318325.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046601.1"; havana_transcript "OTTMUST00000121161.1";
mm10-chrY	HAVANA	exon	78653565	78654053	.	+	.	gene_id "ENSMUSG00000100328.6"; transcript_id "ENSMUST00000189686.6"; gene_type "lincRNA"; gene_name "Gm28816"; transcript_type "lincRNA"; transcript_name "Gm28816-202"; exon_number 4; exon_id "ENSMUSE00001323162.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046601.1"; havana_transcript "OTTMUST00000121161.1";
mm10-chrY	HAVANA	transcript	78651713	78653633	.	+	.	gene_id "ENSMUSG00000100328.6"; transcript_id "ENSMUST00000189295.1"; gene_type "lincRNA"; gene_name "Gm28816"; transcript_type "lincRNA"; transcript_name "Gm28816-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046601.1"; havana_transcript "OTTMUST00000121162.1";
mm10-chrY	HAVANA	exon	78651713	78651855	.	+	.	gene_id "ENSMUSG00000100328.6"; transcript_id "ENSMUST00000189295.1"; gene_type "lincRNA"; gene_name "Gm28816"; transcript_type "lincRNA"; transcript_name "Gm28816-201"; exon_number 1; exon_id "ENSMUSE00001320228.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046601.1"; havana_transcript "OTTMUST00000121162.1";
mm10-chrY	HAVANA	exon	78651898	78652125	.	+	.	gene_id "ENSMUSG00000100328.6"; transcript_id "ENSMUST00000189295.1"; gene_type "lincRNA"; gene_name "Gm28816"; transcript_type "lincRNA"; transcript_name "Gm28816-201"; exon_number 2; exon_id "ENSMUSE00001330415.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046601.1"; havana_transcript "OTTMUST00000121162.1";
mm10-chrY	HAVANA	exon	78653565	78653633	.	+	.	gene_id "ENSMUSG00000100328.6"; transcript_id "ENSMUST00000189295.1"; gene_type "lincRNA"; gene_name "Gm28816"; transcript_type "lincRNA"; transcript_name "Gm28816-201"; exon_number 3; exon_id "ENSMUSE00001323982.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046601.1"; havana_transcript "OTTMUST00000121162.1";
mm10-chrY	HAVANA	gene	78761346	78762038	.	-	.	gene_id "ENSMUSG00000101098.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20808"; level 2; havana_gene "OTTMUSG00000046576.1";
mm10-chrY	HAVANA	transcript	78761346	78762038	.	-	.	gene_id "ENSMUSG00000101098.1"; transcript_id "ENSMUST00000191433.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20808"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20808-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046576.1"; havana_transcript "OTTMUST00000121111.1";
mm10-chrY	HAVANA	exon	78761346	78762038	.	-	.	gene_id "ENSMUSG00000101098.1"; transcript_id "ENSMUST00000191433.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20808"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20808-201"; exon_number 1; exon_id "ENSMUSE00001333500.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046576.1"; havana_transcript "OTTMUST00000121111.1";
mm10-chrY	HAVANA	gene	78835721	78838056	.	-	.	gene_id "ENSMUSG00000094739.2"; gene_type "protein_coding"; gene_name "Gm20806"; level 2; havana_gene "OTTMUSG00000046577.2";
mm10-chrY	HAVANA	transcript	78835721	78838056	.	-	.	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000190349.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-202"; level 2; protein_id "ENSMUSP00000141047.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2"; havana_transcript "OTTMUST00000121112.2";
mm10-chrY	HAVANA	exon	78837938	78838056	.	-	.	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000190349.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-202"; exon_number 1; exon_id "ENSMUSE00001319612.1"; level 2; protein_id "ENSMUSP00000141047.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2"; havana_transcript "OTTMUST00000121112.2";
mm10-chrY	HAVANA	exon	78835721	78836824	.	-	.	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000190349.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-202"; exon_number 2; exon_id "ENSMUSE00001332533.1"; level 2; protein_id "ENSMUSP00000141047.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2"; havana_transcript "OTTMUST00000121112.2";
mm10-chrY	HAVANA	CDS	78835863	78836543	.	-	0	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000190349.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-202"; exon_number 2; exon_id "ENSMUSE00001332533.1"; level 2; protein_id "ENSMUSP00000141047.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2"; havana_transcript "OTTMUST00000121112.2";
mm10-chrY	HAVANA	start_codon	78836541	78836543	.	-	0	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000190349.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-202"; exon_number 2; exon_id "ENSMUSE00001332533.1"; level 2; protein_id "ENSMUSP00000141047.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2"; havana_transcript "OTTMUST00000121112.2";
mm10-chrY	HAVANA	stop_codon	78835860	78835862	.	-	0	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000190349.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-202"; exon_number 2; exon_id "ENSMUSE00001332533.1"; level 2; protein_id "ENSMUSP00000141047.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2"; havana_transcript "OTTMUST00000121112.2";
mm10-chrY	HAVANA	UTR	78837938	78838056	.	-	.	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000190349.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-202"; exon_number 1; exon_id "ENSMUSE00001319612.1"; level 2; protein_id "ENSMUSP00000141047.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2"; havana_transcript "OTTMUST00000121112.2";
mm10-chrY	HAVANA	UTR	78835721	78835862	.	-	.	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000190349.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-202"; exon_number 2; exon_id "ENSMUSE00001332533.1"; level 2; protein_id "ENSMUSP00000141047.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2"; havana_transcript "OTTMUST00000121112.2";
mm10-chrY	HAVANA	UTR	78836544	78836824	.	-	.	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000190349.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-202"; exon_number 2; exon_id "ENSMUSE00001332533.1"; level 2; protein_id "ENSMUSP00000141047.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2"; havana_transcript "OTTMUST00000121112.2";
mm10-chrY	ENSEMBL	transcript	78835860	78836543	.	-	.	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000180324.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-201"; level 3; protein_id "ENSMUSP00000136000.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2";
mm10-chrY	ENSEMBL	exon	78835860	78836543	.	-	.	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000180324.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-201"; exon_number 1; exon_id "ENSMUSE00000984153.1"; level 3; protein_id "ENSMUSP00000136000.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2";
mm10-chrY	ENSEMBL	CDS	78835863	78836543	.	-	0	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000180324.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-201"; exon_number 1; exon_id "ENSMUSE00000984153.1"; level 3; protein_id "ENSMUSP00000136000.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2";
mm10-chrY	ENSEMBL	start_codon	78836541	78836543	.	-	0	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000180324.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-201"; exon_number 1; exon_id "ENSMUSE00000984153.1"; level 3; protein_id "ENSMUSP00000136000.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2";
mm10-chrY	ENSEMBL	stop_codon	78835860	78835862	.	-	0	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000180324.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-201"; exon_number 1; exon_id "ENSMUSE00000984153.1"; level 3; protein_id "ENSMUSP00000136000.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2";
mm10-chrY	ENSEMBL	UTR	78835860	78835862	.	-	.	gene_id "ENSMUSG00000094739.2"; transcript_id "ENSMUST00000180324.1"; gene_type "protein_coding"; gene_name "Gm20806"; transcript_type "protein_coding"; transcript_name "Gm20806-201"; exon_number 1; exon_id "ENSMUSE00000984153.1"; level 3; protein_id "ENSMUSP00000136000.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85905.1"; havana_gene "OTTMUSG00000046577.2";
mm10-chrY	HAVANA	gene	78865482	78866096	.	-	.	gene_id "ENSMUSG00000102071.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28815"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046602.1";
mm10-chrY	HAVANA	transcript	78865482	78866096	.	-	.	gene_id "ENSMUSG00000102071.1"; transcript_id "ENSMUST00000186751.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28815-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046602.1"; havana_transcript "OTTMUST00000121163.1";
mm10-chrY	HAVANA	exon	78865482	78866096	.	-	.	gene_id "ENSMUSG00000102071.1"; transcript_id "ENSMUST00000186751.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28815"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28815-201"; exon_number 1; exon_id "ENSMUSE00001326443.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046602.1"; havana_transcript "OTTMUST00000121163.1";
mm10-chrY	HAVANA	gene	78902314	78903009	.	-	.	gene_id "ENSMUSG00000100741.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28814"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046603.1";
mm10-chrY	HAVANA	transcript	78902314	78903009	.	-	.	gene_id "ENSMUSG00000100741.1"; transcript_id "ENSMUST00000187334.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28814"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28814-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046603.1"; havana_transcript "OTTMUST00000121164.1";
mm10-chrY	HAVANA	exon	78902314	78903009	.	-	.	gene_id "ENSMUSG00000100741.1"; transcript_id "ENSMUST00000187334.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28814"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28814-201"; exon_number 1; exon_id "ENSMUSE00001330008.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046603.1"; havana_transcript "OTTMUST00000121164.1";
mm10-chrY	HAVANA	gene	78927796	78931033	.	+	.	gene_id "ENSMUSG00000101804.1"; gene_type "lincRNA"; gene_name "Gm28813"; level 2; havana_gene "OTTMUSG00000046604.1";
mm10-chrY	HAVANA	transcript	78927796	78931033	.	+	.	gene_id "ENSMUSG00000101804.1"; transcript_id "ENSMUST00000186293.1"; gene_type "lincRNA"; gene_name "Gm28813"; transcript_type "lincRNA"; transcript_name "Gm28813-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046604.1"; havana_transcript "OTTMUST00000121165.1";
mm10-chrY	HAVANA	exon	78927796	78928433	.	+	.	gene_id "ENSMUSG00000101804.1"; transcript_id "ENSMUST00000186293.1"; gene_type "lincRNA"; gene_name "Gm28813"; transcript_type "lincRNA"; transcript_name "Gm28813-201"; exon_number 1; exon_id "ENSMUSE00001319880.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046604.1"; havana_transcript "OTTMUST00000121165.1";
mm10-chrY	HAVANA	exon	78928919	78929104	.	+	.	gene_id "ENSMUSG00000101804.1"; transcript_id "ENSMUST00000186293.1"; gene_type "lincRNA"; gene_name "Gm28813"; transcript_type "lincRNA"; transcript_name "Gm28813-201"; exon_number 2; exon_id "ENSMUSE00001334852.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046604.1"; havana_transcript "OTTMUST00000121165.1";
mm10-chrY	HAVANA	exon	78929834	78930017	.	+	.	gene_id "ENSMUSG00000101804.1"; transcript_id "ENSMUST00000186293.1"; gene_type "lincRNA"; gene_name "Gm28813"; transcript_type "lincRNA"; transcript_name "Gm28813-201"; exon_number 3; exon_id "ENSMUSE00001321530.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046604.1"; havana_transcript "OTTMUST00000121165.1";
mm10-chrY	HAVANA	exon	78930545	78931033	.	+	.	gene_id "ENSMUSG00000101804.1"; transcript_id "ENSMUST00000186293.1"; gene_type "lincRNA"; gene_name "Gm28813"; transcript_type "lincRNA"; transcript_name "Gm28813-201"; exon_number 4; exon_id "ENSMUSE00001325210.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046604.1"; havana_transcript "OTTMUST00000121165.1";
mm10-chrY	HAVANA	transcript	78928248	78930612	.	+	.	gene_id "ENSMUSG00000101804.1"; transcript_id "ENSMUST00000190034.1"; gene_type "lincRNA"; gene_name "Gm28813"; transcript_type "lincRNA"; transcript_name "Gm28813-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046604.1"; havana_transcript "OTTMUST00000121166.1";
mm10-chrY	HAVANA	exon	78928248	78928433	.	+	.	gene_id "ENSMUSG00000101804.1"; transcript_id "ENSMUST00000190034.1"; gene_type "lincRNA"; gene_name "Gm28813"; transcript_type "lincRNA"; transcript_name "Gm28813-202"; exon_number 1; exon_id "ENSMUSE00001321805.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046604.1"; havana_transcript "OTTMUST00000121166.1";
mm10-chrY	HAVANA	exon	78928923	78929104	.	+	.	gene_id "ENSMUSG00000101804.1"; transcript_id "ENSMUST00000190034.1"; gene_type "lincRNA"; gene_name "Gm28813"; transcript_type "lincRNA"; transcript_name "Gm28813-202"; exon_number 2; exon_id "ENSMUSE00001323760.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046604.1"; havana_transcript "OTTMUST00000121166.1";
mm10-chrY	HAVANA	exon	78930545	78930612	.	+	.	gene_id "ENSMUSG00000101804.1"; transcript_id "ENSMUST00000190034.1"; gene_type "lincRNA"; gene_name "Gm28813"; transcript_type "lincRNA"; transcript_name "Gm28813-202"; exon_number 3; exon_id "ENSMUSE00001335927.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046604.1"; havana_transcript "OTTMUST00000121166.1";
mm10-chrY	HAVANA	gene	79074245	79074940	.	-	.	gene_id "ENSMUSG00000099621.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20919"; level 2; havana_gene "OTTMUSG00000046618.1";
mm10-chrY	HAVANA	transcript	79074245	79074940	.	-	.	gene_id "ENSMUSG00000099621.1"; transcript_id "ENSMUST00000185282.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20919"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20919-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046618.1"; havana_transcript "OTTMUST00000121190.1";
mm10-chrY	HAVANA	exon	79074245	79074940	.	-	.	gene_id "ENSMUSG00000099621.1"; transcript_id "ENSMUST00000185282.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20919"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20919-201"; exon_number 1; exon_id "ENSMUSE00001318607.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046618.1"; havana_transcript "OTTMUST00000121190.1";
mm10-chrY	HAVANA	gene	79148789	79151122	.	-	.	gene_id "ENSMUSG00000095867.2"; gene_type "protein_coding"; gene_name "Gm20917"; level 2; havana_gene "OTTMUSG00000046619.2";
mm10-chrY	HAVANA	transcript	79148789	79151122	.	-	.	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000188706.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-202"; level 2; protein_id "ENSMUSP00000140501.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2"; havana_transcript "OTTMUST00000121191.2";
mm10-chrY	HAVANA	exon	79151003	79151122	.	-	.	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000188706.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-202"; exon_number 1; exon_id "ENSMUSE00001323652.1"; level 2; protein_id "ENSMUSP00000140501.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2"; havana_transcript "OTTMUST00000121191.2";
mm10-chrY	HAVANA	exon	79148789	79149892	.	-	.	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000188706.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-202"; exon_number 2; exon_id "ENSMUSE00001328635.1"; level 2; protein_id "ENSMUSP00000140501.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2"; havana_transcript "OTTMUST00000121191.2";
mm10-chrY	HAVANA	CDS	79148931	79149611	.	-	0	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000188706.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-202"; exon_number 2; exon_id "ENSMUSE00001328635.1"; level 2; protein_id "ENSMUSP00000140501.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2"; havana_transcript "OTTMUST00000121191.2";
mm10-chrY	HAVANA	start_codon	79149609	79149611	.	-	0	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000188706.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-202"; exon_number 2; exon_id "ENSMUSE00001328635.1"; level 2; protein_id "ENSMUSP00000140501.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2"; havana_transcript "OTTMUST00000121191.2";
mm10-chrY	HAVANA	stop_codon	79148928	79148930	.	-	0	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000188706.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-202"; exon_number 2; exon_id "ENSMUSE00001328635.1"; level 2; protein_id "ENSMUSP00000140501.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2"; havana_transcript "OTTMUST00000121191.2";
mm10-chrY	HAVANA	UTR	79151003	79151122	.	-	.	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000188706.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-202"; exon_number 1; exon_id "ENSMUSE00001323652.1"; level 2; protein_id "ENSMUSP00000140501.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2"; havana_transcript "OTTMUST00000121191.2";
mm10-chrY	HAVANA	UTR	79148789	79148930	.	-	.	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000188706.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-202"; exon_number 2; exon_id "ENSMUSE00001328635.1"; level 2; protein_id "ENSMUSP00000140501.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2"; havana_transcript "OTTMUST00000121191.2";
mm10-chrY	HAVANA	UTR	79149612	79149892	.	-	.	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000188706.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-202"; exon_number 2; exon_id "ENSMUSE00001328635.1"; level 2; protein_id "ENSMUSP00000140501.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2"; havana_transcript "OTTMUST00000121191.2";
mm10-chrY	ENSEMBL	transcript	79148798	79149787	.	-	.	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000179922.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-201"; level 3; protein_id "ENSMUSP00000137546.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2";
mm10-chrY	ENSEMBL	exon	79148798	79149787	.	-	.	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000179922.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-201"; exon_number 1; exon_id "ENSMUSE00000975289.1"; level 3; protein_id "ENSMUSP00000137546.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2";
mm10-chrY	ENSEMBL	CDS	79148931	79149611	.	-	0	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000179922.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-201"; exon_number 1; exon_id "ENSMUSE00000975289.1"; level 3; protein_id "ENSMUSP00000137546.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2";
mm10-chrY	ENSEMBL	start_codon	79149609	79149611	.	-	0	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000179922.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-201"; exon_number 1; exon_id "ENSMUSE00000975289.1"; level 3; protein_id "ENSMUSP00000137546.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2";
mm10-chrY	ENSEMBL	stop_codon	79148928	79148930	.	-	0	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000179922.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-201"; exon_number 1; exon_id "ENSMUSE00000975289.1"; level 3; protein_id "ENSMUSP00000137546.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2";
mm10-chrY	ENSEMBL	UTR	79148798	79148930	.	-	.	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000179922.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-201"; exon_number 1; exon_id "ENSMUSE00000975289.1"; level 3; protein_id "ENSMUSP00000137546.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2";
mm10-chrY	ENSEMBL	UTR	79149612	79149787	.	-	.	gene_id "ENSMUSG00000095867.2"; transcript_id "ENSMUST00000179922.1"; gene_type "protein_coding"; gene_name "Gm20917"; transcript_type "protein_coding"; transcript_name "Gm20917-201"; exon_number 1; exon_id "ENSMUSE00000975289.1"; level 3; protein_id "ENSMUSP00000137546.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85906.1"; havana_gene "OTTMUSG00000046619.2";
mm10-chrY	HAVANA	gene	79165870	79167412	.	+	.	gene_id "ENSMUSG00000100784.1"; gene_type "lincRNA"; gene_name "Gm28421"; level 2; havana_gene "OTTMUSG00000046620.1";
mm10-chrY	HAVANA	transcript	79165870	79167412	.	+	.	gene_id "ENSMUSG00000100784.1"; transcript_id "ENSMUST00000186378.1"; gene_type "lincRNA"; gene_name "Gm28421"; transcript_type "lincRNA"; transcript_name "Gm28421-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046620.1"; havana_transcript "OTTMUST00000121192.1";
mm10-chrY	HAVANA	exon	79165870	79166087	.	+	.	gene_id "ENSMUSG00000100784.1"; transcript_id "ENSMUST00000186378.1"; gene_type "lincRNA"; gene_name "Gm28421"; transcript_type "lincRNA"; transcript_name "Gm28421-201"; exon_number 1; exon_id "ENSMUSE00001328632.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046620.1"; havana_transcript "OTTMUST00000121192.1";
mm10-chrY	HAVANA	exon	79167275	79167412	.	+	.	gene_id "ENSMUSG00000100784.1"; transcript_id "ENSMUST00000186378.1"; gene_type "lincRNA"; gene_name "Gm28421"; transcript_type "lincRNA"; transcript_name "Gm28421-201"; exon_number 2; exon_id "ENSMUSE00001327850.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046620.1"; havana_transcript "OTTMUST00000121192.1";
mm10-chrY	HAVANA	gene	79178550	79179164	.	-	.	gene_id "ENSMUSG00000101044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28420"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046621.1";
mm10-chrY	HAVANA	transcript	79178550	79179164	.	-	.	gene_id "ENSMUSG00000101044.1"; transcript_id "ENSMUST00000187340.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28420"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28420-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046621.1"; havana_transcript "OTTMUST00000121193.1";
mm10-chrY	HAVANA	exon	79178550	79179164	.	-	.	gene_id "ENSMUSG00000101044.1"; transcript_id "ENSMUST00000187340.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28420"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28420-201"; exon_number 1; exon_id "ENSMUSE00001324074.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046621.1"; havana_transcript "OTTMUST00000121193.1";
mm10-chrY	HAVANA	gene	79215343	79216038	.	-	.	gene_id "ENSMUSG00000099670.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28423"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046622.1";
mm10-chrY	HAVANA	transcript	79215343	79216038	.	-	.	gene_id "ENSMUSG00000099670.1"; transcript_id "ENSMUST00000190701.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28423"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28423-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046622.1"; havana_transcript "OTTMUST00000121194.1";
mm10-chrY	HAVANA	exon	79215343	79216038	.	-	.	gene_id "ENSMUSG00000099670.1"; transcript_id "ENSMUST00000190701.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28423"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28423-201"; exon_number 1; exon_id "ENSMUSE00001327861.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046622.1"; havana_transcript "OTTMUST00000121194.1";
mm10-chrY	HAVANA	gene	79257493	79260745	.	+	.	gene_id "ENSMUSG00000099636.1"; gene_type "lincRNA"; gene_name "Gm28422"; level 2; havana_gene "OTTMUSG00000046623.1";
mm10-chrY	HAVANA	transcript	79257493	79260745	.	+	.	gene_id "ENSMUSG00000099636.1"; transcript_id "ENSMUST00000186112.1"; gene_type "lincRNA"; gene_name "Gm28422"; transcript_type "lincRNA"; transcript_name "Gm28422-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046623.1"; havana_transcript "OTTMUST00000121195.1";
mm10-chrY	HAVANA	exon	79257493	79258133	.	+	.	gene_id "ENSMUSG00000099636.1"; transcript_id "ENSMUST00000186112.1"; gene_type "lincRNA"; gene_name "Gm28422"; transcript_type "lincRNA"; transcript_name "Gm28422-201"; exon_number 1; exon_id "ENSMUSE00001332137.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046623.1"; havana_transcript "OTTMUST00000121195.1";
mm10-chrY	HAVANA	exon	79258619	79258804	.	+	.	gene_id "ENSMUSG00000099636.1"; transcript_id "ENSMUST00000186112.1"; gene_type "lincRNA"; gene_name "Gm28422"; transcript_type "lincRNA"; transcript_name "Gm28422-201"; exon_number 2; exon_id "ENSMUSE00001326637.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046623.1"; havana_transcript "OTTMUST00000121195.1";
mm10-chrY	HAVANA	exon	79259534	79259717	.	+	.	gene_id "ENSMUSG00000099636.1"; transcript_id "ENSMUST00000186112.1"; gene_type "lincRNA"; gene_name "Gm28422"; transcript_type "lincRNA"; transcript_name "Gm28422-201"; exon_number 3; exon_id "ENSMUSE00001322517.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046623.1"; havana_transcript "OTTMUST00000121195.1";
mm10-chrY	HAVANA	exon	79260257	79260745	.	+	.	gene_id "ENSMUSG00000099636.1"; transcript_id "ENSMUST00000186112.1"; gene_type "lincRNA"; gene_name "Gm28422"; transcript_type "lincRNA"; transcript_name "Gm28422-201"; exon_number 4; exon_id "ENSMUSE00001332023.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046623.1"; havana_transcript "OTTMUST00000121195.1";
mm10-chrY	HAVANA	transcript	79257947	79260325	.	+	.	gene_id "ENSMUSG00000099636.1"; transcript_id "ENSMUST00000186849.1"; gene_type "lincRNA"; gene_name "Gm28422"; transcript_type "lincRNA"; transcript_name "Gm28422-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046623.1"; havana_transcript "OTTMUST00000121196.1";
mm10-chrY	HAVANA	exon	79257947	79258133	.	+	.	gene_id "ENSMUSG00000099636.1"; transcript_id "ENSMUST00000186849.1"; gene_type "lincRNA"; gene_name "Gm28422"; transcript_type "lincRNA"; transcript_name "Gm28422-202"; exon_number 1; exon_id "ENSMUSE00001325212.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046623.1"; havana_transcript "OTTMUST00000121196.1";
mm10-chrY	HAVANA	exon	79258623	79258804	.	+	.	gene_id "ENSMUSG00000099636.1"; transcript_id "ENSMUST00000186849.1"; gene_type "lincRNA"; gene_name "Gm28422"; transcript_type "lincRNA"; transcript_name "Gm28422-202"; exon_number 2; exon_id "ENSMUSE00001323300.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046623.1"; havana_transcript "OTTMUST00000121196.1";
mm10-chrY	HAVANA	exon	79260257	79260325	.	+	.	gene_id "ENSMUSG00000099636.1"; transcript_id "ENSMUST00000186849.1"; gene_type "lincRNA"; gene_name "Gm28422"; transcript_type "lincRNA"; transcript_name "Gm28422-202"; exon_number 3; exon_id "ENSMUSE00001324487.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046623.1"; havana_transcript "OTTMUST00000121196.1";
mm10-chrY	HAVANA	gene	79319565	79345707	.	+	.	gene_id "ENSMUSG00000094746.7"; gene_type "protein_coding"; gene_name "Gm20916"; level 2; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	HAVANA	transcript	79319565	79345707	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	exon	79319565	79319608	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 1; exon_id "ENSMUSE00001328791.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	exon	79320974	79321105	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 2; exon_id "ENSMUSE00001325619.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	CDS	79320988	79321105	.	+	0	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 2; exon_id "ENSMUSE00001325619.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	start_codon	79320988	79320990	.	+	0	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 2; exon_id "ENSMUSE00001325619.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	exon	79326436	79326502	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 3; exon_id "ENSMUSE00001090654.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	CDS	79326436	79326502	.	+	2	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 3; exon_id "ENSMUSE00001090654.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	exon	79327126	79327160	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 4; exon_id "ENSMUSE00001059890.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	CDS	79327126	79327160	.	+	1	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 4; exon_id "ENSMUSE00001059890.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	exon	79334163	79334229	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 5; exon_id "ENSMUSE00001023082.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	CDS	79334163	79334229	.	+	2	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 5; exon_id "ENSMUSE00001023082.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	exon	79334810	79334844	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 6; exon_id "ENSMUSE00001085282.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	CDS	79334810	79334844	.	+	1	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 6; exon_id "ENSMUSE00001085282.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	exon	79342006	79342123	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 7; exon_id "ENSMUSE00000976268.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	CDS	79342006	79342123	.	+	2	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 7; exon_id "ENSMUSE00000976268.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	exon	79342888	79342987	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 8; exon_id "ENSMUSE00001334035.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	CDS	79342888	79342987	.	+	1	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 8; exon_id "ENSMUSE00001334035.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	exon	79345024	79345122	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 9; exon_id "ENSMUSE00001321616.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	CDS	79345024	79345122	.	+	0	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 9; exon_id "ENSMUSE00001321616.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	exon	79345482	79345707	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 10; exon_id "ENSMUSE00001325908.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	CDS	79345482	79345508	.	+	0	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 10; exon_id "ENSMUSE00001325908.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	stop_codon	79345509	79345511	.	+	0	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 10; exon_id "ENSMUSE00001325908.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	UTR	79319565	79319608	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 1; exon_id "ENSMUSE00001328791.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	UTR	79320974	79320987	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 2; exon_id "ENSMUSE00001325619.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	HAVANA	UTR	79345509	79345707	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000185338.6"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-202"; exon_number 10; exon_id "ENSMUSE00001325908.1"; level 2; protein_id "ENSMUSP00000140607.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046633.1"; havana_transcript "OTTMUST00000121214.1";
mm10-chrY	ENSEMBL	transcript	79320997	79342954	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	exon	79320997	79321105	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 1; exon_id "ENSMUSE00000965083.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	CDS	79320997	79321105	.	+	0	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 1; exon_id "ENSMUSE00000965083.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	start_codon	79320997	79320999	.	+	0	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 1; exon_id "ENSMUSE00000965083.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	exon	79326436	79326502	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 2; exon_id "ENSMUSE00001090654.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	CDS	79326436	79326502	.	+	2	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 2; exon_id "ENSMUSE00001090654.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	exon	79327126	79327160	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 3; exon_id "ENSMUSE00001059890.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	CDS	79327126	79327160	.	+	1	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 3; exon_id "ENSMUSE00001059890.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	exon	79334163	79334229	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 4; exon_id "ENSMUSE00001023082.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	CDS	79334163	79334229	.	+	2	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 4; exon_id "ENSMUSE00001023082.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	exon	79334810	79334844	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 5; exon_id "ENSMUSE00001085282.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	CDS	79334810	79334844	.	+	1	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 5; exon_id "ENSMUSE00001085282.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	exon	79342006	79342123	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 6; exon_id "ENSMUSE00000976268.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	CDS	79342006	79342123	.	+	2	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 6; exon_id "ENSMUSE00000976268.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	exon	79342888	79342954	.	+	.	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 7; exon_id "ENSMUSE00000972070.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	ENSEMBL	CDS	79342888	79342954	.	+	1	gene_id "ENSMUSG00000094746.7"; transcript_id "ENSMUST00000178063.1"; gene_type "protein_coding"; gene_name "Gm20916"; transcript_type "protein_coding"; transcript_name "Gm20916-201"; exon_number 7; exon_id "ENSMUSE00000972070.1"; level 3; protein_id "ENSMUSP00000136085.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046633.1";
mm10-chrY	HAVANA	gene	79406050	79406745	.	-	.	gene_id "ENSMUSG00000100494.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29033"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046634.1";
mm10-chrY	HAVANA	transcript	79406050	79406745	.	-	.	gene_id "ENSMUSG00000100494.1"; transcript_id "ENSMUST00000189114.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29033"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29033-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046634.1"; havana_transcript "OTTMUST00000121215.1";
mm10-chrY	HAVANA	exon	79406050	79406745	.	-	.	gene_id "ENSMUSG00000100494.1"; transcript_id "ENSMUST00000189114.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29033"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29033-201"; exon_number 1; exon_id "ENSMUSE00001324939.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046634.1"; havana_transcript "OTTMUST00000121215.1";
mm10-chrY	HAVANA	gene	79442960	79443274	.	-	.	gene_id "ENSMUSG00000101118.1"; gene_type "processed_pseudogene"; gene_name "Gm29034"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046635.1";
mm10-chrY	HAVANA	transcript	79442960	79443274	.	-	.	gene_id "ENSMUSG00000101118.1"; transcript_id "ENSMUST00000188099.1"; gene_type "processed_pseudogene"; gene_name "Gm29034"; transcript_type "processed_pseudogene"; transcript_name "Gm29034-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046635.1"; havana_transcript "OTTMUST00000121216.1";
mm10-chrY	HAVANA	exon	79442960	79443274	.	-	.	gene_id "ENSMUSG00000101118.1"; transcript_id "ENSMUST00000188099.1"; gene_type "processed_pseudogene"; gene_name "Gm29034"; transcript_type "processed_pseudogene"; transcript_name "Gm29034-201"; exon_number 1; exon_id "ENSMUSE00001325507.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046635.1"; havana_transcript "OTTMUST00000121216.1";
mm10-chrY	HAVANA	gene	79590266	79590961	.	-	.	gene_id "ENSMUSG00000101748.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21823"; level 2; havana_gene "OTTMUSG00000046636.1";
mm10-chrY	HAVANA	transcript	79590266	79590961	.	-	.	gene_id "ENSMUSG00000101748.1"; transcript_id "ENSMUST00000189122.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21823"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21823-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046636.1"; havana_transcript "OTTMUST00000121217.1";
mm10-chrY	HAVANA	exon	79590266	79590961	.	-	.	gene_id "ENSMUSG00000101748.1"; transcript_id "ENSMUST00000189122.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21823"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21823-201"; exon_number 1; exon_id "ENSMUSE00001322082.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046636.1"; havana_transcript "OTTMUST00000121217.1";
mm10-chrY	HAVANA	gene	79664875	79665570	.	-	.	gene_id "ENSMUSG00000101259.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21242"; level 2; havana_gene "OTTMUSG00000046637.1";
mm10-chrY	HAVANA	transcript	79664875	79665570	.	-	.	gene_id "ENSMUSG00000101259.1"; transcript_id "ENSMUST00000190489.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21242"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21242-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046637.1"; havana_transcript "OTTMUST00000121222.1";
mm10-chrY	HAVANA	exon	79664875	79665570	.	-	.	gene_id "ENSMUSG00000101259.1"; transcript_id "ENSMUST00000190489.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21242"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21242-201"; exon_number 1; exon_id "ENSMUSE00001327889.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046637.1"; havana_transcript "OTTMUST00000121222.1";
mm10-chrY	HAVANA	gene	79694715	79695328	.	-	.	gene_id "ENSMUSG00000100610.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29031"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046638.1";
mm10-chrY	HAVANA	transcript	79694715	79695328	.	-	.	gene_id "ENSMUSG00000100610.1"; transcript_id "ENSMUST00000185316.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29031"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29031-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046638.1"; havana_transcript "OTTMUST00000121223.1";
mm10-chrY	HAVANA	exon	79694715	79695328	.	-	.	gene_id "ENSMUSG00000100610.1"; transcript_id "ENSMUST00000185316.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29031"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29031-201"; exon_number 1; exon_id "ENSMUSE00001322250.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046638.1"; havana_transcript "OTTMUST00000121223.1";
mm10-chrY	HAVANA	gene	79731521	79732217	.	-	.	gene_id "ENSMUSG00000101197.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29032"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046639.1";
mm10-chrY	HAVANA	transcript	79731521	79732217	.	-	.	gene_id "ENSMUSG00000101197.1"; transcript_id "ENSMUST00000189797.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29032"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29032-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046639.1"; havana_transcript "OTTMUST00000121224.1";
mm10-chrY	HAVANA	exon	79731521	79732217	.	-	.	gene_id "ENSMUSG00000101197.1"; transcript_id "ENSMUST00000189797.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29032"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29032-201"; exon_number 1; exon_id "ENSMUSE00001330679.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046639.1"; havana_transcript "OTTMUST00000121224.1";
mm10-chrY	HAVANA	gene	79773450	79776245	.	+	.	gene_id "ENSMUSG00000102016.6"; gene_type "lincRNA"; gene_name "Gm29606"; level 2; havana_gene "OTTMUSG00000046656.1";
mm10-chrY	HAVANA	transcript	79773450	79776245	.	+	.	gene_id "ENSMUSG00000102016.6"; transcript_id "ENSMUST00000188564.6"; gene_type "lincRNA"; gene_name "Gm29606"; transcript_type "lincRNA"; transcript_name "Gm29606-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046656.1"; havana_transcript "OTTMUST00000121249.1";
mm10-chrY	HAVANA	exon	79773450	79774046	.	+	.	gene_id "ENSMUSG00000102016.6"; transcript_id "ENSMUST00000188564.6"; gene_type "lincRNA"; gene_name "Gm29606"; transcript_type "lincRNA"; transcript_name "Gm29606-202"; exon_number 1; exon_id "ENSMUSE00001326701.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046656.1"; havana_transcript "OTTMUST00000121249.1";
mm10-chrY	HAVANA	exon	79774089	79774316	.	+	.	gene_id "ENSMUSG00000102016.6"; transcript_id "ENSMUST00000188564.6"; gene_type "lincRNA"; gene_name "Gm29606"; transcript_type "lincRNA"; transcript_name "Gm29606-202"; exon_number 2; exon_id "ENSMUSE00001326575.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046656.1"; havana_transcript "OTTMUST00000121249.1";
mm10-chrY	HAVANA	exon	79775047	79775230	.	+	.	gene_id "ENSMUSG00000102016.6"; transcript_id "ENSMUST00000188564.6"; gene_type "lincRNA"; gene_name "Gm29606"; transcript_type "lincRNA"; transcript_name "Gm29606-202"; exon_number 3; exon_id "ENSMUSE00001319188.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046656.1"; havana_transcript "OTTMUST00000121249.1";
mm10-chrY	HAVANA	exon	79775757	79776245	.	+	.	gene_id "ENSMUSG00000102016.6"; transcript_id "ENSMUST00000188564.6"; gene_type "lincRNA"; gene_name "Gm29606"; transcript_type "lincRNA"; transcript_name "Gm29606-202"; exon_number 4; exon_id "ENSMUSE00001334561.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046656.1"; havana_transcript "OTTMUST00000121249.1";
mm10-chrY	HAVANA	transcript	79773904	79775825	.	+	.	gene_id "ENSMUSG00000102016.6"; transcript_id "ENSMUST00000187995.1"; gene_type "lincRNA"; gene_name "Gm29606"; transcript_type "lincRNA"; transcript_name "Gm29606-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046656.1"; havana_transcript "OTTMUST00000121250.1";
mm10-chrY	HAVANA	exon	79773904	79774046	.	+	.	gene_id "ENSMUSG00000102016.6"; transcript_id "ENSMUST00000187995.1"; gene_type "lincRNA"; gene_name "Gm29606"; transcript_type "lincRNA"; transcript_name "Gm29606-201"; exon_number 1; exon_id "ENSMUSE00001329567.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046656.1"; havana_transcript "OTTMUST00000121250.1";
mm10-chrY	HAVANA	exon	79774089	79774316	.	+	.	gene_id "ENSMUSG00000102016.6"; transcript_id "ENSMUST00000187995.1"; gene_type "lincRNA"; gene_name "Gm29606"; transcript_type "lincRNA"; transcript_name "Gm29606-201"; exon_number 2; exon_id "ENSMUSE00001326575.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046656.1"; havana_transcript "OTTMUST00000121250.1";
mm10-chrY	HAVANA	exon	79775757	79775825	.	+	.	gene_id "ENSMUSG00000102016.6"; transcript_id "ENSMUST00000187995.1"; gene_type "lincRNA"; gene_name "Gm29606"; transcript_type "lincRNA"; transcript_name "Gm29606-201"; exon_number 3; exon_id "ENSMUSE00001331470.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046656.1"; havana_transcript "OTTMUST00000121250.1";
mm10-chrY	HAVANA	gene	79883600	79884295	.	-	.	gene_id "ENSMUSG00000101340.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29607"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046657.1";
mm10-chrY	HAVANA	transcript	79883600	79884295	.	-	.	gene_id "ENSMUSG00000101340.1"; transcript_id "ENSMUST00000191009.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29607"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29607-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046657.1"; havana_transcript "OTTMUST00000121251.1";
mm10-chrY	HAVANA	exon	79883600	79884295	.	-	.	gene_id "ENSMUSG00000101340.1"; transcript_id "ENSMUST00000191009.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29607"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29607-201"; exon_number 1; exon_id "ENSMUSE00001327473.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046657.1"; havana_transcript "OTTMUST00000121251.1";
mm10-chrY	HAVANA	gene	79958386	79959081	.	-	.	gene_id "ENSMUSG00000099972.1"; gene_type "processed_pseudogene"; gene_name "Gm21248"; level 2; havana_gene "OTTMUSG00000046665.1";
mm10-chrY	HAVANA	transcript	79958386	79959081	.	-	.	gene_id "ENSMUSG00000099972.1"; transcript_id "ENSMUST00000187765.1"; gene_type "processed_pseudogene"; gene_name "Gm21248"; transcript_type "processed_pseudogene"; transcript_name "Gm21248-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000046665.1"; havana_transcript "OTTMUST00000121267.1";
mm10-chrY	HAVANA	exon	79958386	79959081	.	-	.	gene_id "ENSMUSG00000099972.1"; transcript_id "ENSMUST00000187765.1"; gene_type "processed_pseudogene"; gene_name "Gm21248"; transcript_type "processed_pseudogene"; transcript_name "Gm21248-201"; exon_number 1; exon_id "ENSMUSE00001320374.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000046665.1"; havana_transcript "OTTMUST00000121267.1";
mm10-chrY	HAVANA	gene	79985619	79986233	.	-	.	gene_id "ENSMUSG00000101733.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29189"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046666.1";
mm10-chrY	HAVANA	transcript	79985619	79986233	.	-	.	gene_id "ENSMUSG00000101733.1"; transcript_id "ENSMUST00000188018.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29189"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29189-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046666.1"; havana_transcript "OTTMUST00000121268.1";
mm10-chrY	HAVANA	exon	79985619	79986233	.	-	.	gene_id "ENSMUSG00000101733.1"; transcript_id "ENSMUST00000188018.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29189"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29189-201"; exon_number 1; exon_id "ENSMUSE00001332645.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046666.1"; havana_transcript "OTTMUST00000121268.1";
mm10-chrY	HAVANA	gene	80022433	80023128	.	-	.	gene_id "ENSMUSG00000102019.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21873"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046667.1";
mm10-chrY	HAVANA	transcript	80022433	80023128	.	-	.	gene_id "ENSMUSG00000102019.1"; transcript_id "ENSMUST00000186728.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21873"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21873-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046667.1"; havana_transcript "OTTMUST00000121269.1";
mm10-chrY	HAVANA	exon	80022433	80023128	.	-	.	gene_id "ENSMUSG00000102019.1"; transcript_id "ENSMUST00000186728.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21873"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21873-201"; exon_number 1; exon_id "ENSMUSE00001328318.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046667.1"; havana_transcript "OTTMUST00000121269.1";
mm10-chrY	HAVANA	gene	80071842	80075081	.	+	.	gene_id "ENSMUSG00000101465.1"; gene_type "lincRNA"; gene_name "Gm29190"; level 2; havana_gene "OTTMUSG00000046668.1";
mm10-chrY	HAVANA	transcript	80071842	80075081	.	+	.	gene_id "ENSMUSG00000101465.1"; transcript_id "ENSMUST00000188255.1"; gene_type "lincRNA"; gene_name "Gm29190"; transcript_type "lincRNA"; transcript_name "Gm29190-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046668.1"; havana_transcript "OTTMUST00000121270.1";
mm10-chrY	HAVANA	exon	80071842	80072481	.	+	.	gene_id "ENSMUSG00000101465.1"; transcript_id "ENSMUST00000188255.1"; gene_type "lincRNA"; gene_name "Gm29190"; transcript_type "lincRNA"; transcript_name "Gm29190-201"; exon_number 1; exon_id "ENSMUSE00001328767.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046668.1"; havana_transcript "OTTMUST00000121270.1";
mm10-chrY	HAVANA	exon	80072967	80073152	.	+	.	gene_id "ENSMUSG00000101465.1"; transcript_id "ENSMUST00000188255.1"; gene_type "lincRNA"; gene_name "Gm29190"; transcript_type "lincRNA"; transcript_name "Gm29190-201"; exon_number 2; exon_id "ENSMUSE00001330507.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046668.1"; havana_transcript "OTTMUST00000121270.1";
mm10-chrY	HAVANA	exon	80073882	80074065	.	+	.	gene_id "ENSMUSG00000101465.1"; transcript_id "ENSMUST00000188255.1"; gene_type "lincRNA"; gene_name "Gm29190"; transcript_type "lincRNA"; transcript_name "Gm29190-201"; exon_number 3; exon_id "ENSMUSE00001334251.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046668.1"; havana_transcript "OTTMUST00000121270.1";
mm10-chrY	HAVANA	exon	80074593	80075081	.	+	.	gene_id "ENSMUSG00000101465.1"; transcript_id "ENSMUST00000188255.1"; gene_type "lincRNA"; gene_name "Gm29190"; transcript_type "lincRNA"; transcript_name "Gm29190-201"; exon_number 4; exon_id "ENSMUSE00001320882.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046668.1"; havana_transcript "OTTMUST00000121270.1";
mm10-chrY	HAVANA	transcript	80072295	80074661	.	+	.	gene_id "ENSMUSG00000101465.1"; transcript_id "ENSMUST00000191600.1"; gene_type "lincRNA"; gene_name "Gm29190"; transcript_type "lincRNA"; transcript_name "Gm29190-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046668.1"; havana_transcript "OTTMUST00000121271.1";
mm10-chrY	HAVANA	exon	80072295	80072481	.	+	.	gene_id "ENSMUSG00000101465.1"; transcript_id "ENSMUST00000191600.1"; gene_type "lincRNA"; gene_name "Gm29190"; transcript_type "lincRNA"; transcript_name "Gm29190-202"; exon_number 1; exon_id "ENSMUSE00001334648.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046668.1"; havana_transcript "OTTMUST00000121271.1";
mm10-chrY	HAVANA	exon	80072971	80073152	.	+	.	gene_id "ENSMUSG00000101465.1"; transcript_id "ENSMUST00000191600.1"; gene_type "lincRNA"; gene_name "Gm29190"; transcript_type "lincRNA"; transcript_name "Gm29190-202"; exon_number 2; exon_id "ENSMUSE00001330409.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046668.1"; havana_transcript "OTTMUST00000121271.1";
mm10-chrY	HAVANA	exon	80074593	80074661	.	+	.	gene_id "ENSMUSG00000101465.1"; transcript_id "ENSMUST00000191600.1"; gene_type "lincRNA"; gene_name "Gm29190"; transcript_type "lincRNA"; transcript_name "Gm29190-202"; exon_number 3; exon_id "ENSMUSE00001325085.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046668.1"; havana_transcript "OTTMUST00000121271.1";
mm10-chrY	HAVANA	gene	80133779	80159975	.	+	.	gene_id "ENSMUSG00000095578.7"; gene_type "protein_coding"; gene_name "Gm21760"; level 2; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	HAVANA	transcript	80133779	80159975	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	exon	80133779	80133822	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 1; exon_id "ENSMUSE00001333111.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	exon	80135187	80135318	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 2; exon_id "ENSMUSE00001328049.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	CDS	80135201	80135318	.	+	0	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 2; exon_id "ENSMUSE00001328049.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	start_codon	80135201	80135203	.	+	0	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 2; exon_id "ENSMUSE00001328049.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	exon	80140629	80140695	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 3; exon_id "ENSMUSE00001056797.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	CDS	80140629	80140695	.	+	2	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 3; exon_id "ENSMUSE00001056797.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	exon	80141357	80141391	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 4; exon_id "ENSMUSE00001079254.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	CDS	80141357	80141391	.	+	1	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 4; exon_id "ENSMUSE00001079254.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	exon	80148414	80148480	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 5; exon_id "ENSMUSE00000979303.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	CDS	80148414	80148480	.	+	2	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 5; exon_id "ENSMUSE00000979303.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	exon	80149057	80149091	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 6; exon_id "ENSMUSE00001084643.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	CDS	80149057	80149091	.	+	1	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 6; exon_id "ENSMUSE00001084643.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	exon	80156258	80156375	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 7; exon_id "ENSMUSE00001065506.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	CDS	80156258	80156375	.	+	2	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 7; exon_id "ENSMUSE00001065506.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	exon	80157155	80157254	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 8; exon_id "ENSMUSE00001322901.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	CDS	80157155	80157254	.	+	1	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 8; exon_id "ENSMUSE00001322901.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	exon	80159292	80159390	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 9; exon_id "ENSMUSE00001329002.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	CDS	80159292	80159390	.	+	0	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 9; exon_id "ENSMUSE00001329002.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	exon	80159750	80159975	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 10; exon_id "ENSMUSE00001331253.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	CDS	80159750	80159776	.	+	0	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 10; exon_id "ENSMUSE00001331253.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	stop_codon	80159777	80159779	.	+	0	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 10; exon_id "ENSMUSE00001331253.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	UTR	80133779	80133822	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 1; exon_id "ENSMUSE00001333111.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	UTR	80135187	80135200	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 2; exon_id "ENSMUSE00001328049.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	HAVANA	UTR	80159777	80159975	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000187433.6"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-202"; exon_number 10; exon_id "ENSMUSE00001331253.1"; level 2; protein_id "ENSMUSP00000140706.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046669.1"; havana_transcript "OTTMUST00000121272.1";
mm10-chrY	ENSEMBL	transcript	80135210	80157221	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	exon	80135210	80135318	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 1; exon_id "ENSMUSE00001041861.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	CDS	80135210	80135318	.	+	0	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 1; exon_id "ENSMUSE00001041861.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	start_codon	80135210	80135212	.	+	0	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 1; exon_id "ENSMUSE00001041861.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	exon	80140629	80140695	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 2; exon_id "ENSMUSE00001056797.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	CDS	80140629	80140695	.	+	2	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 2; exon_id "ENSMUSE00001056797.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	exon	80141357	80141391	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 3; exon_id "ENSMUSE00001079254.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	CDS	80141357	80141391	.	+	1	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 3; exon_id "ENSMUSE00001079254.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	exon	80148414	80148480	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 4; exon_id "ENSMUSE00000979303.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	CDS	80148414	80148480	.	+	2	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 4; exon_id "ENSMUSE00000979303.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	exon	80149057	80149091	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 5; exon_id "ENSMUSE00001084643.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	CDS	80149057	80149091	.	+	1	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 5; exon_id "ENSMUSE00001084643.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	exon	80156258	80156375	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 6; exon_id "ENSMUSE00001065506.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	CDS	80156258	80156375	.	+	2	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 6; exon_id "ENSMUSE00001065506.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	exon	80157155	80157221	.	+	.	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 7; exon_id "ENSMUSE00001022279.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	ENSEMBL	CDS	80157155	80157221	.	+	1	gene_id "ENSMUSG00000095578.7"; transcript_id "ENSMUST00000179811.1"; gene_type "protein_coding"; gene_name "Gm21760"; transcript_type "protein_coding"; transcript_name "Gm21760-201"; exon_number 7; exon_id "ENSMUSE00001022279.1"; level 3; protein_id "ENSMUSP00000137009.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046669.1";
mm10-chrY	HAVANA	gene	80220073	80220768	.	-	.	gene_id "ENSMUSG00000099734.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28159"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046670.1";
mm10-chrY	HAVANA	transcript	80220073	80220768	.	-	.	gene_id "ENSMUSG00000099734.1"; transcript_id "ENSMUST00000190296.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28159"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28159-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046670.1"; havana_transcript "OTTMUST00000121273.1";
mm10-chrY	HAVANA	exon	80220073	80220768	.	-	.	gene_id "ENSMUSG00000099734.1"; transcript_id "ENSMUST00000190296.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28159"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28159-201"; exon_number 1; exon_id "ENSMUSE00001328508.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046670.1"; havana_transcript "OTTMUST00000121273.1";
mm10-chrY	HAVANA	gene	80239443	80239757	.	-	.	gene_id "ENSMUSG00000100723.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28160"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046671.1";
mm10-chrY	HAVANA	transcript	80239443	80239757	.	-	.	gene_id "ENSMUSG00000100723.1"; transcript_id "ENSMUST00000191229.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28160"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28160-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046671.1"; havana_transcript "OTTMUST00000121274.1";
mm10-chrY	HAVANA	exon	80239443	80239757	.	-	.	gene_id "ENSMUSG00000100723.1"; transcript_id "ENSMUST00000191229.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28160"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28160-201"; exon_number 1; exon_id "ENSMUSE00001336043.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046671.1"; havana_transcript "OTTMUST00000121274.1";
mm10-chrY	HAVANA	gene	80241172	80244513	.	-	.	gene_id "ENSMUSG00000101981.1"; gene_type "lincRNA"; gene_name "Gm28157"; level 2; havana_gene "OTTMUSG00000046672.1";
mm10-chrY	HAVANA	transcript	80241172	80244513	.	-	.	gene_id "ENSMUSG00000101981.1"; transcript_id "ENSMUST00000187675.1"; gene_type "lincRNA"; gene_name "Gm28157"; transcript_type "lincRNA"; transcript_name "Gm28157-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046672.1"; havana_transcript "OTTMUST00000121275.1";
mm10-chrY	HAVANA	exon	80244291	80244513	.	-	.	gene_id "ENSMUSG00000101981.1"; transcript_id "ENSMUST00000187675.1"; gene_type "lincRNA"; gene_name "Gm28157"; transcript_type "lincRNA"; transcript_name "Gm28157-201"; exon_number 1; exon_id "ENSMUSE00001324751.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046672.1"; havana_transcript "OTTMUST00000121275.1";
mm10-chrY	HAVANA	exon	80241172	80243113	.	-	.	gene_id "ENSMUSG00000101981.1"; transcript_id "ENSMUST00000187675.1"; gene_type "lincRNA"; gene_name "Gm28157"; transcript_type "lincRNA"; transcript_name "Gm28157-201"; exon_number 2; exon_id "ENSMUSE00001321328.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046672.1"; havana_transcript "OTTMUST00000121275.1";
mm10-chrY	HAVANA	gene	80388569	80389264	.	-	.	gene_id "ENSMUSG00000100148.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28158"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046673.1";
mm10-chrY	HAVANA	transcript	80388569	80389264	.	-	.	gene_id "ENSMUSG00000100148.1"; transcript_id "ENSMUST00000188431.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28158"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28158-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046673.1"; havana_transcript "OTTMUST00000121276.1";
mm10-chrY	HAVANA	exon	80388569	80389264	.	-	.	gene_id "ENSMUSG00000100148.1"; transcript_id "ENSMUST00000188431.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28158"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28158-201"; exon_number 1; exon_id "ENSMUSE00001334310.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046673.1"; havana_transcript "OTTMUST00000121276.1";
mm10-chrY	HAVANA	gene	80463234	80463929	.	-	.	gene_id "ENSMUSG00000100756.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21257"; level 2; havana_gene "OTTMUSG00000046674.1";
mm10-chrY	HAVANA	transcript	80463234	80463929	.	-	.	gene_id "ENSMUSG00000100756.1"; transcript_id "ENSMUST00000185655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21257"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21257-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046674.1"; havana_transcript "OTTMUST00000121277.1";
mm10-chrY	HAVANA	exon	80463234	80463929	.	-	.	gene_id "ENSMUSG00000100756.1"; transcript_id "ENSMUST00000185655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21257"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21257-201"; exon_number 1; exon_id "ENSMUSE00001326811.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046674.1"; havana_transcript "OTTMUST00000121277.1";
mm10-chrY	HAVANA	gene	80493027	80493640	.	-	.	gene_id "ENSMUSG00000099805.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28161"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046675.1";
mm10-chrY	HAVANA	transcript	80493027	80493640	.	-	.	gene_id "ENSMUSG00000099805.1"; transcript_id "ENSMUST00000186669.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28161"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28161-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046675.1"; havana_transcript "OTTMUST00000121278.1";
mm10-chrY	HAVANA	exon	80493027	80493640	.	-	.	gene_id "ENSMUSG00000099805.1"; transcript_id "ENSMUST00000186669.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28161"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28161-201"; exon_number 1; exon_id "ENSMUSE00001330126.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046675.1"; havana_transcript "OTTMUST00000121278.1";
mm10-chrY	HAVANA	gene	80529823	80530519	.	-	.	gene_id "ENSMUSG00000101070.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28695"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046676.1";
mm10-chrY	HAVANA	transcript	80529823	80530519	.	-	.	gene_id "ENSMUSG00000101070.1"; transcript_id "ENSMUST00000190300.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28695"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28695-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046676.1"; havana_transcript "OTTMUST00000121279.1";
mm10-chrY	HAVANA	exon	80529823	80530519	.	-	.	gene_id "ENSMUSG00000101070.1"; transcript_id "ENSMUST00000190300.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28695"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28695-201"; exon_number 1; exon_id "ENSMUSE00001320274.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046676.1"; havana_transcript "OTTMUST00000121279.1";
mm10-chrY	HAVANA	gene	80536406	80539754	.	-	.	gene_id "ENSMUSG00000100286.1"; gene_type "lincRNA"; gene_name "Gm28696"; level 2; havana_gene "OTTMUSG00000046677.1";
mm10-chrY	HAVANA	transcript	80536406	80539754	.	-	.	gene_id "ENSMUSG00000100286.1"; transcript_id "ENSMUST00000189187.1"; gene_type "lincRNA"; gene_name "Gm28696"; transcript_type "lincRNA"; transcript_name "Gm28696-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046677.1"; havana_transcript "OTTMUST00000121280.1";
mm10-chrY	HAVANA	exon	80539532	80539754	.	-	.	gene_id "ENSMUSG00000100286.1"; transcript_id "ENSMUST00000189187.1"; gene_type "lincRNA"; gene_name "Gm28696"; transcript_type "lincRNA"; transcript_name "Gm28696-201"; exon_number 1; exon_id "ENSMUSE00001326997.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046677.1"; havana_transcript "OTTMUST00000121280.1";
mm10-chrY	HAVANA	exon	80536406	80538351	.	-	.	gene_id "ENSMUSG00000100286.1"; transcript_id "ENSMUST00000189187.1"; gene_type "lincRNA"; gene_name "Gm28696"; transcript_type "lincRNA"; transcript_name "Gm28696-201"; exon_number 2; exon_id "ENSMUSE00001320063.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046677.1"; havana_transcript "OTTMUST00000121280.1";
mm10-chrY	HAVANA	gene	80681811	80682503	.	-	.	gene_id "ENSMUSG00000101833.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20791"; level 2; havana_gene "OTTMUSG00000046678.1";
mm10-chrY	HAVANA	transcript	80681811	80682503	.	-	.	gene_id "ENSMUSG00000101833.1"; transcript_id "ENSMUST00000187310.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20791"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20791-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046678.1"; havana_transcript "OTTMUST00000121281.1";
mm10-chrY	HAVANA	exon	80681811	80682503	.	-	.	gene_id "ENSMUSG00000101833.1"; transcript_id "ENSMUST00000187310.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20791"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20791-201"; exon_number 1; exon_id "ENSMUSE00001321983.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046678.1"; havana_transcript "OTTMUST00000121281.1";
mm10-chrY	HAVANA	gene	80756339	80757034	.	-	.	gene_id "ENSMUSG00000101688.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20841"; level 2; havana_gene "OTTMUSG00000046679.1";
mm10-chrY	HAVANA	transcript	80756339	80757034	.	-	.	gene_id "ENSMUSG00000101688.1"; transcript_id "ENSMUST00000190209.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20841"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20841-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046679.1"; havana_transcript "OTTMUST00000121282.1";
mm10-chrY	HAVANA	exon	80756339	80757034	.	-	.	gene_id "ENSMUSG00000101688.1"; transcript_id "ENSMUST00000190209.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20841"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20841-201"; exon_number 1; exon_id "ENSMUSE00001335006.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046679.1"; havana_transcript "OTTMUST00000121282.1";
mm10-chrY	HAVANA	gene	80785961	80786575	.	-	.	gene_id "ENSMUSG00000099679.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28899"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046680.1";
mm10-chrY	HAVANA	transcript	80785961	80786575	.	-	.	gene_id "ENSMUSG00000099679.1"; transcript_id "ENSMUST00000191161.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28899"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28899-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046680.1"; havana_transcript "OTTMUST00000121283.1";
mm10-chrY	HAVANA	exon	80785961	80786575	.	-	.	gene_id "ENSMUSG00000099679.1"; transcript_id "ENSMUST00000191161.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28899"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28899-201"; exon_number 1; exon_id "ENSMUSE00001323894.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046680.1"; havana_transcript "OTTMUST00000121283.1";
mm10-chrY	HAVANA	gene	80822758	80823453	.	-	.	gene_id "ENSMUSG00000099677.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21722"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046681.1";
mm10-chrY	HAVANA	transcript	80822758	80823453	.	-	.	gene_id "ENSMUSG00000099677.1"; transcript_id "ENSMUST00000190153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21722"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21722-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046681.1"; havana_transcript "OTTMUST00000121284.1";
mm10-chrY	HAVANA	exon	80822758	80823453	.	-	.	gene_id "ENSMUSG00000099677.1"; transcript_id "ENSMUST00000190153.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21722"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21722-201"; exon_number 1; exon_id "ENSMUSE00001323264.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046681.1"; havana_transcript "OTTMUST00000121284.1";
mm10-chrY	HAVANA	gene	80829542	80832885	.	-	.	gene_id "ENSMUSG00000100925.1"; gene_type "lincRNA"; gene_name "Gm28898"; level 2; havana_gene "OTTMUSG00000046682.1";
mm10-chrY	HAVANA	transcript	80829542	80832885	.	-	.	gene_id "ENSMUSG00000100925.1"; transcript_id "ENSMUST00000189604.1"; gene_type "lincRNA"; gene_name "Gm28898"; transcript_type "lincRNA"; transcript_name "Gm28898-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046682.1"; havana_transcript "OTTMUST00000121285.1";
mm10-chrY	HAVANA	exon	80832663	80832885	.	-	.	gene_id "ENSMUSG00000100925.1"; transcript_id "ENSMUST00000189604.1"; gene_type "lincRNA"; gene_name "Gm28898"; transcript_type "lincRNA"; transcript_name "Gm28898-201"; exon_number 1; exon_id "ENSMUSE00001333505.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046682.1"; havana_transcript "OTTMUST00000121285.1";
mm10-chrY	HAVANA	exon	80829542	80831485	.	-	.	gene_id "ENSMUSG00000100925.1"; transcript_id "ENSMUST00000189604.1"; gene_type "lincRNA"; gene_name "Gm28898"; transcript_type "lincRNA"; transcript_name "Gm28898-201"; exon_number 2; exon_id "ENSMUSE00001332100.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046682.1"; havana_transcript "OTTMUST00000121285.1";
mm10-chrY	HAVANA	gene	80926995	80953258	.	+	.	gene_id "ENSMUSG00000099740.1"; gene_type "protein_coding"; gene_name "Gm28897"; level 2; havana_gene "OTTMUSG00000046683.1";
mm10-chrY	HAVANA	transcript	80926995	80953258	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	exon	80926995	80927038	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 1; exon_id "ENSMUSE00001319083.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	exon	80928404	80928535	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 2; exon_id "ENSMUSE00001321804.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	CDS	80928418	80928535	.	+	0	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 2; exon_id "ENSMUSE00001321804.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	start_codon	80928418	80928420	.	+	0	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 2; exon_id "ENSMUSE00001321804.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	exon	80933843	80933909	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 3; exon_id "ENSMUSE00001319391.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	CDS	80933843	80933909	.	+	2	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 3; exon_id "ENSMUSE00001319391.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	exon	80934601	80934635	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 4; exon_id "ENSMUSE00001324243.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	CDS	80934601	80934635	.	+	1	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 4; exon_id "ENSMUSE00001324243.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	exon	80941675	80941741	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 5; exon_id "ENSMUSE00001332669.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	CDS	80941675	80941741	.	+	2	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 5; exon_id "ENSMUSE00001332669.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	exon	80942319	80942353	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 6; exon_id "ENSMUSE00001321919.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	CDS	80942319	80942353	.	+	1	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 6; exon_id "ENSMUSE00001321919.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	exon	80949539	80949656	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 7; exon_id "ENSMUSE00001332428.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	CDS	80949539	80949656	.	+	2	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 7; exon_id "ENSMUSE00001332428.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	exon	80950438	80950537	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 8; exon_id "ENSMUSE00001332110.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	CDS	80950438	80950537	.	+	1	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 8; exon_id "ENSMUSE00001332110.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	exon	80952575	80952673	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 9; exon_id "ENSMUSE00001319429.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	CDS	80952575	80952673	.	+	0	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 9; exon_id "ENSMUSE00001319429.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	exon	80953033	80953258	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 10; exon_id "ENSMUSE00001328429.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	CDS	80953033	80953059	.	+	0	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 10; exon_id "ENSMUSE00001328429.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	stop_codon	80953060	80953062	.	+	0	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 10; exon_id "ENSMUSE00001328429.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	UTR	80926995	80927038	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 1; exon_id "ENSMUSE00001319083.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	UTR	80928404	80928417	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 2; exon_id "ENSMUSE00001321804.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	UTR	80953060	80953258	.	+	.	gene_id "ENSMUSG00000099740.1"; transcript_id "ENSMUST00000185340.1"; gene_type "protein_coding"; gene_name "Gm28897"; transcript_type "protein_coding"; transcript_name "Gm28897-201"; exon_number 10; exon_id "ENSMUSE00001328429.1"; level 2; protein_id "ENSMUSP00000140644.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046683.1"; havana_transcript "OTTMUST00000121286.1";
mm10-chrY	HAVANA	gene	81013392	81014087	.	-	.	gene_id "ENSMUSG00000101637.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28896"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046684.1";
mm10-chrY	HAVANA	transcript	81013392	81014087	.	-	.	gene_id "ENSMUSG00000101637.1"; transcript_id "ENSMUST00000188609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28896"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28896-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046684.1"; havana_transcript "OTTMUST00000121287.1";
mm10-chrY	HAVANA	exon	81013392	81014087	.	-	.	gene_id "ENSMUSG00000101637.1"; transcript_id "ENSMUST00000188609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28896"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28896-201"; exon_number 1; exon_id "ENSMUSE00001326267.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046684.1"; havana_transcript "OTTMUST00000121287.1";
mm10-chrY	HAVANA	gene	81203798	81204493	.	-	.	gene_id "ENSMUSG00000100245.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21282"; level 2; havana_gene "OTTMUSG00000046685.1";
mm10-chrY	HAVANA	transcript	81203798	81204493	.	-	.	gene_id "ENSMUSG00000100245.1"; transcript_id "ENSMUST00000186766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21282"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21282-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046685.1"; havana_transcript "OTTMUST00000121288.1";
mm10-chrY	HAVANA	exon	81203798	81204493	.	-	.	gene_id "ENSMUSG00000100245.1"; transcript_id "ENSMUST00000186766.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21282"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21282-201"; exon_number 1; exon_id "ENSMUSE00001320830.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046685.1"; havana_transcript "OTTMUST00000121288.1";
mm10-chrY	HAVANA	gene	81284980	81285675	.	-	.	gene_id "ENSMUSG00000100469.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28895"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046686.1";
mm10-chrY	HAVANA	transcript	81284980	81285675	.	-	.	gene_id "ENSMUSG00000100469.1"; transcript_id "ENSMUST00000188733.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28895"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28895-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046686.1"; havana_transcript "OTTMUST00000121289.1";
mm10-chrY	HAVANA	exon	81284980	81285675	.	-	.	gene_id "ENSMUSG00000100469.1"; transcript_id "ENSMUST00000188733.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28895"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28895-201"; exon_number 1; exon_id "ENSMUSE00001322102.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046686.1"; havana_transcript "OTTMUST00000121289.1";
mm10-chrY	HAVANA	gene	81314499	81315113	.	-	.	gene_id "ENSMUSG00000100821.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28894"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046687.1";
mm10-chrY	HAVANA	transcript	81314499	81315113	.	-	.	gene_id "ENSMUSG00000100821.1"; transcript_id "ENSMUST00000185214.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28894"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28894-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046687.1"; havana_transcript "OTTMUST00000121290.1";
mm10-chrY	HAVANA	exon	81314499	81315113	.	-	.	gene_id "ENSMUSG00000100821.1"; transcript_id "ENSMUST00000185214.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28894"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28894-201"; exon_number 1; exon_id "ENSMUSE00001324798.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046687.1"; havana_transcript "OTTMUST00000121290.1";
mm10-chrY	HAVANA	gene	81351339	81352034	.	-	.	gene_id "ENSMUSG00000101058.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21829"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046718.1";
mm10-chrY	HAVANA	transcript	81351339	81352034	.	-	.	gene_id "ENSMUSG00000101058.1"; transcript_id "ENSMUST00000188787.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21829"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21829-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046718.1"; havana_transcript "OTTMUST00000121339.1";
mm10-chrY	HAVANA	exon	81351339	81352034	.	-	.	gene_id "ENSMUSG00000101058.1"; transcript_id "ENSMUST00000188787.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21829"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21829-201"; exon_number 1; exon_id "ENSMUSE00001320249.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046718.1"; havana_transcript "OTTMUST00000121339.1";
mm10-chrY	HAVANA	gene	81395901	81399138	.	+	.	gene_id "ENSMUSG00000100187.1"; gene_type "lincRNA"; gene_name "Gm29324"; level 2; havana_gene "OTTMUSG00000046719.1";
mm10-chrY	HAVANA	transcript	81395901	81399138	.	+	.	gene_id "ENSMUSG00000100187.1"; transcript_id "ENSMUST00000188242.1"; gene_type "lincRNA"; gene_name "Gm29324"; transcript_type "lincRNA"; transcript_name "Gm29324-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046719.1"; havana_transcript "OTTMUST00000121340.1";
mm10-chrY	HAVANA	exon	81395901	81396538	.	+	.	gene_id "ENSMUSG00000100187.1"; transcript_id "ENSMUST00000188242.1"; gene_type "lincRNA"; gene_name "Gm29324"; transcript_type "lincRNA"; transcript_name "Gm29324-202"; exon_number 1; exon_id "ENSMUSE00001328719.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046719.1"; havana_transcript "OTTMUST00000121340.1";
mm10-chrY	HAVANA	exon	81397024	81397209	.	+	.	gene_id "ENSMUSG00000100187.1"; transcript_id "ENSMUST00000188242.1"; gene_type "lincRNA"; gene_name "Gm29324"; transcript_type "lincRNA"; transcript_name "Gm29324-202"; exon_number 2; exon_id "ENSMUSE00001333063.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046719.1"; havana_transcript "OTTMUST00000121340.1";
mm10-chrY	HAVANA	exon	81397940	81398123	.	+	.	gene_id "ENSMUSG00000100187.1"; transcript_id "ENSMUST00000188242.1"; gene_type "lincRNA"; gene_name "Gm29324"; transcript_type "lincRNA"; transcript_name "Gm29324-202"; exon_number 3; exon_id "ENSMUSE00001328237.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046719.1"; havana_transcript "OTTMUST00000121340.1";
mm10-chrY	HAVANA	exon	81398650	81399138	.	+	.	gene_id "ENSMUSG00000100187.1"; transcript_id "ENSMUST00000188242.1"; gene_type "lincRNA"; gene_name "Gm29324"; transcript_type "lincRNA"; transcript_name "Gm29324-202"; exon_number 4; exon_id "ENSMUSE00001326874.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046719.1"; havana_transcript "OTTMUST00000121340.1";
mm10-chrY	HAVANA	transcript	81396352	81398718	.	+	.	gene_id "ENSMUSG00000100187.1"; transcript_id "ENSMUST00000186348.1"; gene_type "lincRNA"; gene_name "Gm29324"; transcript_type "lincRNA"; transcript_name "Gm29324-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046719.1"; havana_transcript "OTTMUST00000121341.1";
mm10-chrY	HAVANA	exon	81396352	81396538	.	+	.	gene_id "ENSMUSG00000100187.1"; transcript_id "ENSMUST00000186348.1"; gene_type "lincRNA"; gene_name "Gm29324"; transcript_type "lincRNA"; transcript_name "Gm29324-201"; exon_number 1; exon_id "ENSMUSE00001332575.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046719.1"; havana_transcript "OTTMUST00000121341.1";
mm10-chrY	HAVANA	exon	81397028	81397209	.	+	.	gene_id "ENSMUSG00000100187.1"; transcript_id "ENSMUST00000186348.1"; gene_type "lincRNA"; gene_name "Gm29324"; transcript_type "lincRNA"; transcript_name "Gm29324-201"; exon_number 2; exon_id "ENSMUSE00001321643.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046719.1"; havana_transcript "OTTMUST00000121341.1";
mm10-chrY	HAVANA	exon	81398650	81398718	.	+	.	gene_id "ENSMUSG00000100187.1"; transcript_id "ENSMUST00000186348.1"; gene_type "lincRNA"; gene_name "Gm29324"; transcript_type "lincRNA"; transcript_name "Gm29324-201"; exon_number 3; exon_id "ENSMUSE00001330215.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046719.1"; havana_transcript "OTTMUST00000121341.1";
mm10-chrY	HAVANA	gene	81458007	81484087	.	+	.	gene_id "ENSMUSG00000099894.1"; gene_type "protein_coding"; gene_name "Gm20911"; level 2; havana_gene "OTTMUSG00000046720.1";
mm10-chrY	HAVANA	transcript	81458007	81484087	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	exon	81458007	81458050	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 1; exon_id "ENSMUSE00001328321.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	exon	81459415	81459546	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 2; exon_id "ENSMUSE00001334299.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	CDS	81459429	81459546	.	+	0	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 2; exon_id "ENSMUSE00001334299.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	start_codon	81459429	81459431	.	+	0	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 2; exon_id "ENSMUSE00001334299.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	exon	81464881	81464947	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 3; exon_id "ENSMUSE00001327010.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	CDS	81464881	81464947	.	+	2	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 3; exon_id "ENSMUSE00001327010.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	exon	81465554	81465588	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 4; exon_id "ENSMUSE00001325666.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	CDS	81465554	81465588	.	+	1	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 4; exon_id "ENSMUSE00001325666.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	exon	81472543	81472609	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 5; exon_id "ENSMUSE00001319205.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	CDS	81472543	81472609	.	+	2	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 5; exon_id "ENSMUSE00001319205.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	exon	81473186	81473220	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 6; exon_id "ENSMUSE00001318353.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	CDS	81473186	81473220	.	+	1	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 6; exon_id "ENSMUSE00001318353.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	exon	81480375	81480492	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 7; exon_id "ENSMUSE00001324941.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	CDS	81480375	81480492	.	+	2	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 7; exon_id "ENSMUSE00001324941.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	exon	81481265	81481364	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 8; exon_id "ENSMUSE00001333440.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	CDS	81481265	81481364	.	+	1	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 8; exon_id "ENSMUSE00001333440.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	exon	81483403	81483501	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 9; exon_id "ENSMUSE00001319584.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	CDS	81483403	81483501	.	+	0	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 9; exon_id "ENSMUSE00001319584.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	exon	81483861	81484087	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 10; exon_id "ENSMUSE00001334987.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	CDS	81483861	81483887	.	+	0	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 10; exon_id "ENSMUSE00001334987.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	stop_codon	81483888	81483890	.	+	0	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 10; exon_id "ENSMUSE00001334987.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	UTR	81458007	81458050	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 1; exon_id "ENSMUSE00001328321.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	UTR	81459415	81459428	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 2; exon_id "ENSMUSE00001334299.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	UTR	81483888	81484087	.	+	.	gene_id "ENSMUSG00000099894.1"; transcript_id "ENSMUST00000187135.1"; gene_type "protein_coding"; gene_name "Gm20911"; transcript_type "protein_coding"; transcript_name "Gm20911-201"; exon_number 10; exon_id "ENSMUSE00001334987.1"; level 2; protein_id "ENSMUSP00000141161.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046720.1"; havana_transcript "OTTMUST00000121342.1";
mm10-chrY	HAVANA	gene	81545079	81545774	.	-	.	gene_id "ENSMUSG00000100125.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28739"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046721.1";
mm10-chrY	HAVANA	transcript	81545079	81545774	.	-	.	gene_id "ENSMUSG00000100125.1"; transcript_id "ENSMUST00000185415.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28739"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28739-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046721.1"; havana_transcript "OTTMUST00000121343.1";
mm10-chrY	HAVANA	exon	81545079	81545774	.	-	.	gene_id "ENSMUSG00000100125.1"; transcript_id "ENSMUST00000185415.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28739"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28739-201"; exon_number 1; exon_id "ENSMUSE00001326930.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046721.1"; havana_transcript "OTTMUST00000121343.1";
mm10-chrY	HAVANA	gene	81618972	81622209	.	+	.	gene_id "ENSMUSG00000101962.1"; gene_type "lincRNA"; gene_name "Gm28741"; level 2; havana_gene "OTTMUSG00000046723.1";
mm10-chrY	HAVANA	transcript	81618972	81622209	.	+	.	gene_id "ENSMUSG00000101962.1"; transcript_id "ENSMUST00000189417.1"; gene_type "lincRNA"; gene_name "Gm28741"; transcript_type "lincRNA"; transcript_name "Gm28741-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046723.1"; havana_transcript "OTTMUST00000121345.1";
mm10-chrY	HAVANA	exon	81618972	81619610	.	+	.	gene_id "ENSMUSG00000101962.1"; transcript_id "ENSMUST00000189417.1"; gene_type "lincRNA"; gene_name "Gm28741"; transcript_type "lincRNA"; transcript_name "Gm28741-201"; exon_number 1; exon_id "ENSMUSE00001335790.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046723.1"; havana_transcript "OTTMUST00000121345.1";
mm10-chrY	HAVANA	exon	81620096	81620281	.	+	.	gene_id "ENSMUSG00000101962.1"; transcript_id "ENSMUST00000189417.1"; gene_type "lincRNA"; gene_name "Gm28741"; transcript_type "lincRNA"; transcript_name "Gm28741-201"; exon_number 2; exon_id "ENSMUSE00001330308.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046723.1"; havana_transcript "OTTMUST00000121345.1";
mm10-chrY	HAVANA	exon	81621011	81621194	.	+	.	gene_id "ENSMUSG00000101962.1"; transcript_id "ENSMUST00000189417.1"; gene_type "lincRNA"; gene_name "Gm28741"; transcript_type "lincRNA"; transcript_name "Gm28741-201"; exon_number 3; exon_id "ENSMUSE00001323415.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046723.1"; havana_transcript "OTTMUST00000121345.1";
mm10-chrY	HAVANA	exon	81621721	81622209	.	+	.	gene_id "ENSMUSG00000101962.1"; transcript_id "ENSMUST00000189417.1"; gene_type "lincRNA"; gene_name "Gm28741"; transcript_type "lincRNA"; transcript_name "Gm28741-201"; exon_number 4; exon_id "ENSMUSE00001320898.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046723.1"; havana_transcript "OTTMUST00000121345.1";
mm10-chrY	HAVANA	transcript	81619425	81621785	.	+	.	gene_id "ENSMUSG00000101962.1"; transcript_id "ENSMUST00000189713.1"; gene_type "lincRNA"; gene_name "Gm28741"; transcript_type "lincRNA"; transcript_name "Gm28741-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046723.1"; havana_transcript "OTTMUST00000121346.1";
mm10-chrY	HAVANA	exon	81619425	81619610	.	+	.	gene_id "ENSMUSG00000101962.1"; transcript_id "ENSMUST00000189713.1"; gene_type "lincRNA"; gene_name "Gm28741"; transcript_type "lincRNA"; transcript_name "Gm28741-202"; exon_number 1; exon_id "ENSMUSE00001324991.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046723.1"; havana_transcript "OTTMUST00000121346.1";
mm10-chrY	HAVANA	exon	81620100	81620281	.	+	.	gene_id "ENSMUSG00000101962.1"; transcript_id "ENSMUST00000189713.1"; gene_type "lincRNA"; gene_name "Gm28741"; transcript_type "lincRNA"; transcript_name "Gm28741-202"; exon_number 2; exon_id "ENSMUSE00001329151.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046723.1"; havana_transcript "OTTMUST00000121346.1";
mm10-chrY	HAVANA	exon	81621721	81621785	.	+	.	gene_id "ENSMUSG00000101962.1"; transcript_id "ENSMUST00000189713.1"; gene_type "lincRNA"; gene_name "Gm28741"; transcript_type "lincRNA"; transcript_name "Gm28741-202"; exon_number 3; exon_id "ENSMUSE00001327247.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046723.1"; havana_transcript "OTTMUST00000121346.1";
mm10-chrY	HAVANA	gene	81724610	81725302	.	-	.	gene_id "ENSMUSG00000100978.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20912"; level 2; havana_gene "OTTMUSG00000046724.1";
mm10-chrY	HAVANA	transcript	81724610	81725302	.	-	.	gene_id "ENSMUSG00000100978.1"; transcript_id "ENSMUST00000189184.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20912"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20912-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046724.1"; havana_transcript "OTTMUST00000121347.1";
mm10-chrY	HAVANA	exon	81724610	81725302	.	-	.	gene_id "ENSMUSG00000100978.1"; transcript_id "ENSMUST00000189184.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20912"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20912-201"; exon_number 1; exon_id "ENSMUSE00001325119.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046724.1"; havana_transcript "OTTMUST00000121347.1";
mm10-chrY	HAVANA	gene	81799290	81799967	.	-	.	gene_id "ENSMUSG00000100519.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20801"; level 2; havana_gene "OTTMUSG00000046726.1";
mm10-chrY	HAVANA	transcript	81799290	81799967	.	-	.	gene_id "ENSMUSG00000100519.1"; transcript_id "ENSMUST00000187654.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20801"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20801-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046726.1"; havana_transcript "OTTMUST00000121349.1";
mm10-chrY	HAVANA	exon	81799290	81799967	.	-	.	gene_id "ENSMUSG00000100519.1"; transcript_id "ENSMUST00000187654.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20801"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20801-201"; exon_number 1; exon_id "ENSMUSE00001329788.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046726.1"; havana_transcript "OTTMUST00000121349.1";
mm10-chrY	HAVANA	gene	81831779	81832393	.	-	.	gene_id "ENSMUSG00000100598.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28742"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046727.1";
mm10-chrY	HAVANA	transcript	81831779	81832393	.	-	.	gene_id "ENSMUSG00000100598.1"; transcript_id "ENSMUST00000191001.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28742"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28742-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046727.1"; havana_transcript "OTTMUST00000121350.1";
mm10-chrY	HAVANA	exon	81831779	81832393	.	-	.	gene_id "ENSMUSG00000100598.1"; transcript_id "ENSMUST00000191001.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28742"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28742-201"; exon_number 1; exon_id "ENSMUSE00001335928.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046727.1"; havana_transcript "OTTMUST00000121350.1";
mm10-chrY	HAVANA	gene	81868597	81869292	.	-	.	gene_id "ENSMUSG00000100591.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21919"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046728.1";
mm10-chrY	HAVANA	transcript	81868597	81869292	.	-	.	gene_id "ENSMUSG00000100591.1"; transcript_id "ENSMUST00000185653.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21919"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21919-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046728.1"; havana_transcript "OTTMUST00000121351.1";
mm10-chrY	HAVANA	exon	81868597	81869292	.	-	.	gene_id "ENSMUSG00000100591.1"; transcript_id "ENSMUST00000185653.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21919"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21919-201"; exon_number 1; exon_id "ENSMUSE00001326382.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046728.1"; havana_transcript "OTTMUST00000121351.1";
mm10-chrY	HAVANA	gene	81875412	81878760	.	-	.	gene_id "ENSMUSG00000100879.1"; gene_type "lincRNA"; gene_name "Gm28743"; level 2; havana_gene "OTTMUSG00000046729.1";
mm10-chrY	HAVANA	transcript	81875412	81878760	.	-	.	gene_id "ENSMUSG00000100879.1"; transcript_id "ENSMUST00000189014.1"; gene_type "lincRNA"; gene_name "Gm28743"; transcript_type "lincRNA"; transcript_name "Gm28743-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046729.1"; havana_transcript "OTTMUST00000121352.1";
mm10-chrY	HAVANA	exon	81878538	81878760	.	-	.	gene_id "ENSMUSG00000100879.1"; transcript_id "ENSMUST00000189014.1"; gene_type "lincRNA"; gene_name "Gm28743"; transcript_type "lincRNA"; transcript_name "Gm28743-201"; exon_number 1; exon_id "ENSMUSE00001322553.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046729.1"; havana_transcript "OTTMUST00000121352.1";
mm10-chrY	HAVANA	exon	81875412	81877356	.	-	.	gene_id "ENSMUSG00000100879.1"; transcript_id "ENSMUST00000189014.1"; gene_type "lincRNA"; gene_name "Gm28743"; transcript_type "lincRNA"; transcript_name "Gm28743-201"; exon_number 2; exon_id "ENSMUSE00001323249.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000046729.1"; havana_transcript "OTTMUST00000121352.1";
mm10-chrY	HAVANA	gene	81910690	81913928	.	+	.	gene_id "ENSMUSG00000099480.1"; gene_type "lincRNA"; gene_name "Gm28124"; level 2; havana_gene "OTTMUSG00000046730.1";
mm10-chrY	HAVANA	transcript	81910690	81913928	.	+	.	gene_id "ENSMUSG00000099480.1"; transcript_id "ENSMUST00000191099.1"; gene_type "lincRNA"; gene_name "Gm28124"; transcript_type "lincRNA"; transcript_name "Gm28124-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046730.1"; havana_transcript "OTTMUST00000121353.1";
mm10-chrY	HAVANA	exon	81910690	81911328	.	+	.	gene_id "ENSMUSG00000099480.1"; transcript_id "ENSMUST00000191099.1"; gene_type "lincRNA"; gene_name "Gm28124"; transcript_type "lincRNA"; transcript_name "Gm28124-202"; exon_number 1; exon_id "ENSMUSE00001329400.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046730.1"; havana_transcript "OTTMUST00000121353.1";
mm10-chrY	HAVANA	exon	81911814	81911999	.	+	.	gene_id "ENSMUSG00000099480.1"; transcript_id "ENSMUST00000191099.1"; gene_type "lincRNA"; gene_name "Gm28124"; transcript_type "lincRNA"; transcript_name "Gm28124-202"; exon_number 2; exon_id "ENSMUSE00001319906.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046730.1"; havana_transcript "OTTMUST00000121353.1";
mm10-chrY	HAVANA	exon	81912729	81912912	.	+	.	gene_id "ENSMUSG00000099480.1"; transcript_id "ENSMUST00000191099.1"; gene_type "lincRNA"; gene_name "Gm28124"; transcript_type "lincRNA"; transcript_name "Gm28124-202"; exon_number 3; exon_id "ENSMUSE00001325325.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046730.1"; havana_transcript "OTTMUST00000121353.1";
mm10-chrY	HAVANA	exon	81913440	81913928	.	+	.	gene_id "ENSMUSG00000099480.1"; transcript_id "ENSMUST00000191099.1"; gene_type "lincRNA"; gene_name "Gm28124"; transcript_type "lincRNA"; transcript_name "Gm28124-202"; exon_number 4; exon_id "ENSMUSE00001328386.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046730.1"; havana_transcript "OTTMUST00000121353.1";
mm10-chrY	HAVANA	transcript	81911142	81913508	.	+	.	gene_id "ENSMUSG00000099480.1"; transcript_id "ENSMUST00000188498.1"; gene_type "lincRNA"; gene_name "Gm28124"; transcript_type "lincRNA"; transcript_name "Gm28124-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046730.1"; havana_transcript "OTTMUST00000121354.1";
mm10-chrY	HAVANA	exon	81911142	81911328	.	+	.	gene_id "ENSMUSG00000099480.1"; transcript_id "ENSMUST00000188498.1"; gene_type "lincRNA"; gene_name "Gm28124"; transcript_type "lincRNA"; transcript_name "Gm28124-201"; exon_number 1; exon_id "ENSMUSE00001323824.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046730.1"; havana_transcript "OTTMUST00000121354.1";
mm10-chrY	HAVANA	exon	81911818	81911999	.	+	.	gene_id "ENSMUSG00000099480.1"; transcript_id "ENSMUST00000188498.1"; gene_type "lincRNA"; gene_name "Gm28124"; transcript_type "lincRNA"; transcript_name "Gm28124-201"; exon_number 2; exon_id "ENSMUSE00001334314.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046730.1"; havana_transcript "OTTMUST00000121354.1";
mm10-chrY	HAVANA	exon	81913440	81913508	.	+	.	gene_id "ENSMUSG00000099480.1"; transcript_id "ENSMUST00000188498.1"; gene_type "lincRNA"; gene_name "Gm28124"; transcript_type "lincRNA"; transcript_name "Gm28124-201"; exon_number 3; exon_id "ENSMUSE00001320947.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046730.1"; havana_transcript "OTTMUST00000121354.1";
mm10-chrY	HAVANA	gene	82019229	82019921	.	-	.	gene_id "ENSMUSG00000101914.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21790"; level 2; havana_gene "OTTMUSG00000046736.1";
mm10-chrY	HAVANA	transcript	82019229	82019921	.	-	.	gene_id "ENSMUSG00000101914.1"; transcript_id "ENSMUST00000191392.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21790"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21790-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046736.1"; havana_transcript "OTTMUST00000121366.1";
mm10-chrY	HAVANA	exon	82019229	82019921	.	-	.	gene_id "ENSMUSG00000101914.1"; transcript_id "ENSMUST00000191392.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21790"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21790-201"; exon_number 1; exon_id "ENSMUSE00001332056.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046736.1"; havana_transcript "OTTMUST00000121366.1";
mm10-chrY	HAVANA	gene	82093811	82094505	.	-	.	gene_id "ENSMUSG00000099834.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21728"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046737.1";
mm10-chrY	HAVANA	transcript	82093811	82094505	.	-	.	gene_id "ENSMUSG00000099834.1"; transcript_id "ENSMUST00000188442.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21728-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046737.1"; havana_transcript "OTTMUST00000121367.1";
mm10-chrY	HAVANA	exon	82093811	82094505	.	-	.	gene_id "ENSMUSG00000099834.1"; transcript_id "ENSMUST00000188442.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21728"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21728-201"; exon_number 1; exon_id "ENSMUSE00001324022.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046737.1"; havana_transcript "OTTMUST00000121367.1";
mm10-chrY	HAVANA	gene	82110703	82112245	.	+	.	gene_id "ENSMUSG00000100298.1"; gene_type "lincRNA"; gene_name "Gm28126"; level 2; havana_gene "OTTMUSG00000046738.1";
mm10-chrY	HAVANA	transcript	82110703	82112245	.	+	.	gene_id "ENSMUSG00000100298.1"; transcript_id "ENSMUST00000185286.1"; gene_type "lincRNA"; gene_name "Gm28126"; transcript_type "lincRNA"; transcript_name "Gm28126-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046738.1"; havana_transcript "OTTMUST00000121368.1";
mm10-chrY	HAVANA	exon	82110703	82110920	.	+	.	gene_id "ENSMUSG00000100298.1"; transcript_id "ENSMUST00000185286.1"; gene_type "lincRNA"; gene_name "Gm28126"; transcript_type "lincRNA"; transcript_name "Gm28126-201"; exon_number 1; exon_id "ENSMUSE00001330185.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046738.1"; havana_transcript "OTTMUST00000121368.1";
mm10-chrY	HAVANA	exon	82112108	82112245	.	+	.	gene_id "ENSMUSG00000100298.1"; transcript_id "ENSMUST00000185286.1"; gene_type "lincRNA"; gene_name "Gm28126"; transcript_type "lincRNA"; transcript_name "Gm28126-201"; exon_number 2; exon_id "ENSMUSE00001322932.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046738.1"; havana_transcript "OTTMUST00000121368.1";
mm10-chrY	HAVANA	gene	82125942	82126556	.	-	.	gene_id "ENSMUSG00000101201.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28125"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046739.1";
mm10-chrY	HAVANA	transcript	82125942	82126556	.	-	.	gene_id "ENSMUSG00000101201.1"; transcript_id "ENSMUST00000188470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28125"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28125-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046739.1"; havana_transcript "OTTMUST00000121369.1";
mm10-chrY	HAVANA	exon	82125942	82126556	.	-	.	gene_id "ENSMUSG00000101201.1"; transcript_id "ENSMUST00000188470.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28125"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28125-201"; exon_number 1; exon_id "ENSMUSE00001331994.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046739.1"; havana_transcript "OTTMUST00000121369.1";
mm10-chrY	HAVANA	gene	82162737	82163432	.	-	.	gene_id "ENSMUSG00000100438.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21825"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046740.1";
mm10-chrY	HAVANA	transcript	82162737	82163432	.	-	.	gene_id "ENSMUSG00000100438.1"; transcript_id "ENSMUST00000185728.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21825"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21825-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046740.1"; havana_transcript "OTTMUST00000121370.1";
mm10-chrY	HAVANA	exon	82162737	82163432	.	-	.	gene_id "ENSMUSG00000100438.1"; transcript_id "ENSMUST00000185728.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21825"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21825-201"; exon_number 1; exon_id "ENSMUSE00001328726.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046740.1"; havana_transcript "OTTMUST00000121370.1";
mm10-chrY	HAVANA	gene	82225227	82251419	.	+	.	gene_id "ENSMUSG00000101286.1"; gene_type "protein_coding"; gene_name "Gm21317"; level 2; havana_gene "OTTMUSG00000046741.1";
mm10-chrY	HAVANA	transcript	82225227	82251419	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	exon	82225227	82225270	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 1; exon_id "ENSMUSE00001333551.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	exon	82226635	82226766	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 2; exon_id "ENSMUSE00001320524.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	CDS	82226649	82226766	.	+	0	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 2; exon_id "ENSMUSE00001320524.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	start_codon	82226649	82226651	.	+	0	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 2; exon_id "ENSMUSE00001320524.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	exon	82232098	82232164	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 3; exon_id "ENSMUSE00001330915.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	CDS	82232098	82232164	.	+	2	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 3; exon_id "ENSMUSE00001330915.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	exon	82232842	82232876	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 4; exon_id "ENSMUSE00001335224.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	CDS	82232842	82232876	.	+	1	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 4; exon_id "ENSMUSE00001335224.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	exon	82239896	82239962	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 5; exon_id "ENSMUSE00001324727.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	CDS	82239896	82239962	.	+	2	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 5; exon_id "ENSMUSE00001324727.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	exon	82240536	82240570	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 6; exon_id "ENSMUSE00001322674.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	CDS	82240536	82240570	.	+	1	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 6; exon_id "ENSMUSE00001322674.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	exon	82247722	82247839	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 7; exon_id "ENSMUSE00001331182.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	CDS	82247722	82247839	.	+	2	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 7; exon_id "ENSMUSE00001331182.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	exon	82248601	82248700	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 8; exon_id "ENSMUSE00001321748.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	CDS	82248601	82248700	.	+	1	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 8; exon_id "ENSMUSE00001321748.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	exon	82250736	82250834	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 9; exon_id "ENSMUSE00001333875.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	CDS	82250736	82250834	.	+	0	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 9; exon_id "ENSMUSE00001333875.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	exon	82251194	82251419	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 10; exon_id "ENSMUSE00001333013.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	CDS	82251194	82251220	.	+	0	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 10; exon_id "ENSMUSE00001333013.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	stop_codon	82251221	82251223	.	+	0	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 10; exon_id "ENSMUSE00001333013.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	UTR	82225227	82225270	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 1; exon_id "ENSMUSE00001333551.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	UTR	82226635	82226648	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 2; exon_id "ENSMUSE00001320524.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	UTR	82251221	82251419	.	+	.	gene_id "ENSMUSG00000101286.1"; transcript_id "ENSMUST00000185636.1"; gene_type "protein_coding"; gene_name "Gm21317"; transcript_type "protein_coding"; transcript_name "Gm21317-201"; exon_number 10; exon_id "ENSMUSE00001333013.1"; level 2; protein_id "ENSMUSP00000140162.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046741.1"; havana_transcript "OTTMUST00000121371.1";
mm10-chrY	HAVANA	gene	82316567	82317262	.	-	.	gene_id "ENSMUSG00000100268.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29468"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046742.1";
mm10-chrY	HAVANA	transcript	82316567	82317262	.	-	.	gene_id "ENSMUSG00000100268.1"; transcript_id "ENSMUST00000185978.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29468"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29468-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046742.1"; havana_transcript "OTTMUST00000121372.1";
mm10-chrY	HAVANA	exon	82316567	82317262	.	-	.	gene_id "ENSMUSG00000100268.1"; transcript_id "ENSMUST00000185978.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29468"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29468-201"; exon_number 1; exon_id "ENSMUSE00001320963.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046742.1"; havana_transcript "OTTMUST00000121372.1";
mm10-chrY	HAVANA	gene	82345116	82345430	.	-	.	gene_id "ENSMUSG00000101343.1"; gene_type "processed_pseudogene"; gene_name "Gm29469"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046743.1";
mm10-chrY	HAVANA	transcript	82345116	82345430	.	-	.	gene_id "ENSMUSG00000101343.1"; transcript_id "ENSMUST00000191448.1"; gene_type "processed_pseudogene"; gene_name "Gm29469"; transcript_type "processed_pseudogene"; transcript_name "Gm29469-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046743.1"; havana_transcript "OTTMUST00000121373.1";
mm10-chrY	HAVANA	exon	82345116	82345430	.	-	.	gene_id "ENSMUSG00000101343.1"; transcript_id "ENSMUST00000191448.1"; gene_type "processed_pseudogene"; gene_name "Gm29469"; transcript_type "processed_pseudogene"; transcript_name "Gm29469-201"; exon_number 1; exon_id "ENSMUSE00001335231.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046743.1"; havana_transcript "OTTMUST00000121373.1";
mm10-chrY	HAVANA	gene	82346845	82350188	.	-	.	gene_id "ENSMUSG00000101907.1"; gene_type "lincRNA"; gene_name "Gm29472"; level 2; havana_gene "OTTMUSG00000046744.1";
mm10-chrY	HAVANA	transcript	82346845	82350188	.	-	.	gene_id "ENSMUSG00000101907.1"; transcript_id "ENSMUST00000188599.1"; gene_type "lincRNA"; gene_name "Gm29472"; transcript_type "lincRNA"; transcript_name "Gm29472-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046744.1"; havana_transcript "OTTMUST00000121374.1";
mm10-chrY	HAVANA	exon	82349966	82350188	.	-	.	gene_id "ENSMUSG00000101907.1"; transcript_id "ENSMUST00000188599.1"; gene_type "lincRNA"; gene_name "Gm29472"; transcript_type "lincRNA"; transcript_name "Gm29472-201"; exon_number 1; exon_id "ENSMUSE00001323501.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046744.1"; havana_transcript "OTTMUST00000121374.1";
mm10-chrY	HAVANA	exon	82346845	82348788	.	-	.	gene_id "ENSMUSG00000101907.1"; transcript_id "ENSMUST00000188599.1"; gene_type "lincRNA"; gene_name "Gm29472"; transcript_type "lincRNA"; transcript_name "Gm29472-201"; exon_number 2; exon_id "ENSMUSE00001327359.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046744.1"; havana_transcript "OTTMUST00000121374.1";
mm10-chrY	HAVANA	gene	82382189	82385425	.	+	.	gene_id "ENSMUSG00000100035.1"; gene_type "lincRNA"; gene_name "Gm29473"; level 2; havana_gene "OTTMUSG00000046745.1";
mm10-chrY	HAVANA	transcript	82382189	82385425	.	+	.	gene_id "ENSMUSG00000100035.1"; transcript_id "ENSMUST00000185588.1"; gene_type "lincRNA"; gene_name "Gm29473"; transcript_type "lincRNA"; transcript_name "Gm29473-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046745.1"; havana_transcript "OTTMUST00000121375.1";
mm10-chrY	HAVANA	exon	82382189	82382826	.	+	.	gene_id "ENSMUSG00000100035.1"; transcript_id "ENSMUST00000185588.1"; gene_type "lincRNA"; gene_name "Gm29473"; transcript_type "lincRNA"; transcript_name "Gm29473-201"; exon_number 1; exon_id "ENSMUSE00001328348.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046745.1"; havana_transcript "OTTMUST00000121375.1";
mm10-chrY	HAVANA	exon	82383312	82383497	.	+	.	gene_id "ENSMUSG00000100035.1"; transcript_id "ENSMUST00000185588.1"; gene_type "lincRNA"; gene_name "Gm29473"; transcript_type "lincRNA"; transcript_name "Gm29473-201"; exon_number 2; exon_id "ENSMUSE00001330790.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046745.1"; havana_transcript "OTTMUST00000121375.1";
mm10-chrY	HAVANA	exon	82384227	82384410	.	+	.	gene_id "ENSMUSG00000100035.1"; transcript_id "ENSMUST00000185588.1"; gene_type "lincRNA"; gene_name "Gm29473"; transcript_type "lincRNA"; transcript_name "Gm29473-201"; exon_number 3; exon_id "ENSMUSE00001335880.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046745.1"; havana_transcript "OTTMUST00000121375.1";
mm10-chrY	HAVANA	exon	82384937	82385425	.	+	.	gene_id "ENSMUSG00000100035.1"; transcript_id "ENSMUST00000185588.1"; gene_type "lincRNA"; gene_name "Gm29473"; transcript_type "lincRNA"; transcript_name "Gm29473-201"; exon_number 4; exon_id "ENSMUSE00001321263.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046745.1"; havana_transcript "OTTMUST00000121375.1";
mm10-chrY	HAVANA	transcript	82382641	82385005	.	+	.	gene_id "ENSMUSG00000100035.1"; transcript_id "ENSMUST00000186503.1"; gene_type "lincRNA"; gene_name "Gm29473"; transcript_type "lincRNA"; transcript_name "Gm29473-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046745.1"; havana_transcript "OTTMUST00000121376.1";
mm10-chrY	HAVANA	exon	82382641	82382826	.	+	.	gene_id "ENSMUSG00000100035.1"; transcript_id "ENSMUST00000186503.1"; gene_type "lincRNA"; gene_name "Gm29473"; transcript_type "lincRNA"; transcript_name "Gm29473-202"; exon_number 1; exon_id "ENSMUSE00001329568.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046745.1"; havana_transcript "OTTMUST00000121376.1";
mm10-chrY	HAVANA	exon	82383316	82383497	.	+	.	gene_id "ENSMUSG00000100035.1"; transcript_id "ENSMUST00000186503.1"; gene_type "lincRNA"; gene_name "Gm29473"; transcript_type "lincRNA"; transcript_name "Gm29473-202"; exon_number 2; exon_id "ENSMUSE00001335375.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046745.1"; havana_transcript "OTTMUST00000121376.1";
mm10-chrY	HAVANA	exon	82384937	82385005	.	+	.	gene_id "ENSMUSG00000100035.1"; transcript_id "ENSMUST00000186503.1"; gene_type "lincRNA"; gene_name "Gm29473"; transcript_type "lincRNA"; transcript_name "Gm29473-202"; exon_number 3; exon_id "ENSMUSE00001321770.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046745.1"; havana_transcript "OTTMUST00000121376.1";
mm10-chrY	HAVANA	gene	82492958	82493653	.	-	.	gene_id "ENSMUSG00000101072.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29470"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046746.1";
mm10-chrY	HAVANA	transcript	82492958	82493653	.	-	.	gene_id "ENSMUSG00000101072.1"; transcript_id "ENSMUST00000188007.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29470"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29470-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046746.1"; havana_transcript "OTTMUST00000121377.1";
mm10-chrY	HAVANA	exon	82492958	82493653	.	-	.	gene_id "ENSMUSG00000101072.1"; transcript_id "ENSMUST00000188007.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29470"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29470-201"; exon_number 1; exon_id "ENSMUSE00001324677.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046746.1"; havana_transcript "OTTMUST00000121377.1";
mm10-chrY	HAVANA	gene	82567512	82568207	.	-	.	gene_id "ENSMUSG00000100994.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21333"; level 2; havana_gene "OTTMUSG00000046789.1";
mm10-chrY	HAVANA	transcript	82567512	82568207	.	-	.	gene_id "ENSMUSG00000100994.1"; transcript_id "ENSMUST00000187487.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21333"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21333-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046789.1"; havana_transcript "OTTMUST00000121420.1";
mm10-chrY	HAVANA	exon	82567512	82568207	.	-	.	gene_id "ENSMUSG00000100994.1"; transcript_id "ENSMUST00000187487.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21333"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21333-201"; exon_number 1; exon_id "ENSMUSE00001332674.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046789.1"; havana_transcript "OTTMUST00000121420.1";
mm10-chrY	HAVANA	gene	82597290	82597904	.	-	.	gene_id "ENSMUSG00000100861.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29382"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046790.1";
mm10-chrY	HAVANA	transcript	82597290	82597904	.	-	.	gene_id "ENSMUSG00000100861.1"; transcript_id "ENSMUST00000189549.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29382"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29382-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046790.1"; havana_transcript "OTTMUST00000121421.1";
mm10-chrY	HAVANA	exon	82597290	82597904	.	-	.	gene_id "ENSMUSG00000100861.1"; transcript_id "ENSMUST00000189549.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29382"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29382-201"; exon_number 1; exon_id "ENSMUSE00001320459.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046790.1"; havana_transcript "OTTMUST00000121421.1";
mm10-chrY	HAVANA	gene	82633907	82634603	.	-	.	gene_id "ENSMUSG00000100317.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28224"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046805.1";
mm10-chrY	HAVANA	transcript	82633907	82634603	.	-	.	gene_id "ENSMUSG00000100317.1"; transcript_id "ENSMUST00000186078.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28224"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28224-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046805.1"; havana_transcript "OTTMUST00000121439.1";
mm10-chrY	HAVANA	exon	82633907	82634603	.	-	.	gene_id "ENSMUSG00000100317.1"; transcript_id "ENSMUST00000186078.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28224"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28224-201"; exon_number 1; exon_id "ENSMUSE00001334589.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046805.1"; havana_transcript "OTTMUST00000121439.1";
mm10-chrY	HAVANA	gene	82640490	82643838	.	-	.	gene_id "ENSMUSG00000101329.1"; gene_type "lincRNA"; gene_name "Gm28226"; level 2; havana_gene "OTTMUSG00000046806.1";
mm10-chrY	HAVANA	transcript	82640490	82643838	.	-	.	gene_id "ENSMUSG00000101329.1"; transcript_id "ENSMUST00000186916.1"; gene_type "lincRNA"; gene_name "Gm28226"; transcript_type "lincRNA"; transcript_name "Gm28226-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046806.1"; havana_transcript "OTTMUST00000121440.1";
mm10-chrY	HAVANA	exon	82643616	82643838	.	-	.	gene_id "ENSMUSG00000101329.1"; transcript_id "ENSMUST00000186916.1"; gene_type "lincRNA"; gene_name "Gm28226"; transcript_type "lincRNA"; transcript_name "Gm28226-201"; exon_number 1; exon_id "ENSMUSE00001323504.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046806.1"; havana_transcript "OTTMUST00000121440.1";
mm10-chrY	HAVANA	exon	82640490	82642435	.	-	.	gene_id "ENSMUSG00000101329.1"; transcript_id "ENSMUST00000186916.1"; gene_type "lincRNA"; gene_name "Gm28226"; transcript_type "lincRNA"; transcript_name "Gm28226-201"; exon_number 2; exon_id "ENSMUSE00001330031.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046806.1"; havana_transcript "OTTMUST00000121440.1";
mm10-chrY	HAVANA	gene	82675727	82678966	.	+	.	gene_id "ENSMUSG00000100532.1"; gene_type "lincRNA"; gene_name "Gm28225"; level 2; havana_gene "OTTMUSG00000046807.1";
mm10-chrY	HAVANA	transcript	82675727	82678966	.	+	.	gene_id "ENSMUSG00000100532.1"; transcript_id "ENSMUST00000187730.1"; gene_type "lincRNA"; gene_name "Gm28225"; transcript_type "lincRNA"; transcript_name "Gm28225-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046807.1"; havana_transcript "OTTMUST00000121441.1";
mm10-chrY	HAVANA	exon	82675727	82676366	.	+	.	gene_id "ENSMUSG00000100532.1"; transcript_id "ENSMUST00000187730.1"; gene_type "lincRNA"; gene_name "Gm28225"; transcript_type "lincRNA"; transcript_name "Gm28225-201"; exon_number 1; exon_id "ENSMUSE00001333627.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046807.1"; havana_transcript "OTTMUST00000121441.1";
mm10-chrY	HAVANA	exon	82676852	82677037	.	+	.	gene_id "ENSMUSG00000100532.1"; transcript_id "ENSMUST00000187730.1"; gene_type "lincRNA"; gene_name "Gm28225"; transcript_type "lincRNA"; transcript_name "Gm28225-201"; exon_number 2; exon_id "ENSMUSE00001318600.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046807.1"; havana_transcript "OTTMUST00000121441.1";
mm10-chrY	HAVANA	exon	82677767	82677950	.	+	.	gene_id "ENSMUSG00000100532.1"; transcript_id "ENSMUST00000187730.1"; gene_type "lincRNA"; gene_name "Gm28225"; transcript_type "lincRNA"; transcript_name "Gm28225-201"; exon_number 3; exon_id "ENSMUSE00001321951.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046807.1"; havana_transcript "OTTMUST00000121441.1";
mm10-chrY	HAVANA	exon	82678478	82678966	.	+	.	gene_id "ENSMUSG00000100532.1"; transcript_id "ENSMUST00000187730.1"; gene_type "lincRNA"; gene_name "Gm28225"; transcript_type "lincRNA"; transcript_name "Gm28225-201"; exon_number 4; exon_id "ENSMUSE00001325067.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046807.1"; havana_transcript "OTTMUST00000121441.1";
mm10-chrY	HAVANA	transcript	82676180	82678542	.	+	.	gene_id "ENSMUSG00000100532.1"; transcript_id "ENSMUST00000188925.1"; gene_type "lincRNA"; gene_name "Gm28225"; transcript_type "lincRNA"; transcript_name "Gm28225-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046807.1"; havana_transcript "OTTMUST00000121442.1";
mm10-chrY	HAVANA	exon	82676180	82676366	.	+	.	gene_id "ENSMUSG00000100532.1"; transcript_id "ENSMUST00000188925.1"; gene_type "lincRNA"; gene_name "Gm28225"; transcript_type "lincRNA"; transcript_name "Gm28225-202"; exon_number 1; exon_id "ENSMUSE00001324259.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046807.1"; havana_transcript "OTTMUST00000121442.1";
mm10-chrY	HAVANA	exon	82676856	82677037	.	+	.	gene_id "ENSMUSG00000100532.1"; transcript_id "ENSMUST00000188925.1"; gene_type "lincRNA"; gene_name "Gm28225"; transcript_type "lincRNA"; transcript_name "Gm28225-202"; exon_number 2; exon_id "ENSMUSE00001327315.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046807.1"; havana_transcript "OTTMUST00000121442.1";
mm10-chrY	HAVANA	exon	82678478	82678542	.	+	.	gene_id "ENSMUSG00000100532.1"; transcript_id "ENSMUST00000188925.1"; gene_type "lincRNA"; gene_name "Gm28225"; transcript_type "lincRNA"; transcript_name "Gm28225-202"; exon_number 3; exon_id "ENSMUSE00001333211.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046807.1"; havana_transcript "OTTMUST00000121442.1";
mm10-chrY	HAVANA	gene	82787051	82787743	.	-	.	gene_id "ENSMUSG00000099374.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21344"; level 2; havana_gene "OTTMUSG00000046808.1";
mm10-chrY	HAVANA	transcript	82787051	82787743	.	-	.	gene_id "ENSMUSG00000099374.1"; transcript_id "ENSMUST00000186754.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21344"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21344-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046808.1"; havana_transcript "OTTMUST00000121443.1";
mm10-chrY	HAVANA	exon	82787051	82787743	.	-	.	gene_id "ENSMUSG00000099374.1"; transcript_id "ENSMUST00000186754.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21344"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21344-201"; exon_number 1; exon_id "ENSMUSE00001334131.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046808.1"; havana_transcript "OTTMUST00000121443.1";
mm10-chrY	HAVANA	gene	82861333	82862028	.	-	.	gene_id "ENSMUSG00000100882.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20849"; level 2; havana_gene "OTTMUSG00000046809.1";
mm10-chrY	HAVANA	transcript	82861333	82862028	.	-	.	gene_id "ENSMUSG00000100882.1"; transcript_id "ENSMUST00000189065.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20849"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20849-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046809.1"; havana_transcript "OTTMUST00000121444.1";
mm10-chrY	HAVANA	exon	82861333	82862028	.	-	.	gene_id "ENSMUSG00000100882.1"; transcript_id "ENSMUST00000189065.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20849"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20849-201"; exon_number 1; exon_id "ENSMUSE00001335347.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046809.1"; havana_transcript "OTTMUST00000121444.1";
mm10-chrY	HAVANA	gene	82890986	82891600	.	-	.	gene_id "ENSMUSG00000101772.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28829"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046810.1";
mm10-chrY	HAVANA	transcript	82890986	82891600	.	-	.	gene_id "ENSMUSG00000101772.1"; transcript_id "ENSMUST00000186231.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28829"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28829-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046810.1"; havana_transcript "OTTMUST00000121445.1";
mm10-chrY	HAVANA	exon	82890986	82891600	.	-	.	gene_id "ENSMUSG00000101772.1"; transcript_id "ENSMUST00000186231.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28829"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28829-201"; exon_number 1; exon_id "ENSMUSE00001324687.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046810.1"; havana_transcript "OTTMUST00000121445.1";
mm10-chrY	HAVANA	gene	82927738	82928433	.	-	.	gene_id "ENSMUSG00000099667.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21901"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046811.1";
mm10-chrY	HAVANA	transcript	82927738	82928433	.	-	.	gene_id "ENSMUSG00000099667.1"; transcript_id "ENSMUST00000189568.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21901-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046811.1"; havana_transcript "OTTMUST00000121446.1";
mm10-chrY	HAVANA	exon	82927738	82928433	.	-	.	gene_id "ENSMUSG00000099667.1"; transcript_id "ENSMUST00000189568.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21901"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21901-201"; exon_number 1; exon_id "ENSMUSE00001332953.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046811.1"; havana_transcript "OTTMUST00000121446.1";
mm10-chrY	HAVANA	gene	83030947	83057301	.	+	.	gene_id "ENSMUSG00000099925.1"; gene_type "protein_coding"; gene_name "Gm28827"; level 2; havana_gene "OTTMUSG00000046812.1";
mm10-chrY	HAVANA	transcript	83030947	83057301	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	exon	83030947	83030990	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 1; exon_id "ENSMUSE00001328264.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	exon	83032355	83032486	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 2; exon_id "ENSMUSE00001335805.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	CDS	83032369	83032486	.	+	0	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 2; exon_id "ENSMUSE00001335805.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	start_codon	83032369	83032371	.	+	0	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 2; exon_id "ENSMUSE00001335805.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	exon	83037791	83037857	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 3; exon_id "ENSMUSE00001331779.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	CDS	83037791	83037857	.	+	2	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 3; exon_id "ENSMUSE00001331779.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	exon	83038507	83038541	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 4; exon_id "ENSMUSE00001329697.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	CDS	83038507	83038541	.	+	1	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 4; exon_id "ENSMUSE00001329697.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	exon	83045595	83045661	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 5; exon_id "ENSMUSE00001320410.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	CDS	83045595	83045661	.	+	2	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 5; exon_id "ENSMUSE00001320410.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	exon	83046237	83046271	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 6; exon_id "ENSMUSE00001331175.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	CDS	83046237	83046271	.	+	1	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 6; exon_id "ENSMUSE00001331175.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	exon	83053583	83053700	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 7; exon_id "ENSMUSE00001326490.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	CDS	83053583	83053700	.	+	2	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 7; exon_id "ENSMUSE00001326490.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	exon	83054475	83054574	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 8; exon_id "ENSMUSE00001319875.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	CDS	83054475	83054574	.	+	1	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 8; exon_id "ENSMUSE00001319875.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	exon	83056618	83056716	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 9; exon_id "ENSMUSE00001324594.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	CDS	83056618	83056716	.	+	0	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 9; exon_id "ENSMUSE00001324594.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	exon	83057076	83057301	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 10; exon_id "ENSMUSE00001323516.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	CDS	83057076	83057102	.	+	0	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 10; exon_id "ENSMUSE00001323516.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	stop_codon	83057103	83057105	.	+	0	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 10; exon_id "ENSMUSE00001323516.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	UTR	83030947	83030990	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 1; exon_id "ENSMUSE00001328264.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	UTR	83032355	83032368	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 2; exon_id "ENSMUSE00001335805.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	UTR	83057103	83057301	.	+	.	gene_id "ENSMUSG00000099925.1"; transcript_id "ENSMUST00000187165.1"; gene_type "protein_coding"; gene_name "Gm28827"; transcript_type "protein_coding"; transcript_name "Gm28827-201"; exon_number 10; exon_id "ENSMUSE00001323516.1"; level 2; protein_id "ENSMUSP00000139992.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046812.1"; havana_transcript "OTTMUST00000121447.1";
mm10-chrY	HAVANA	gene	83117631	83118326	.	-	.	gene_id "ENSMUSG00000101582.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28828"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046813.1";
mm10-chrY	HAVANA	transcript	83117631	83118326	.	-	.	gene_id "ENSMUSG00000101582.1"; transcript_id "ENSMUST00000186601.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28828"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28828-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046813.1"; havana_transcript "OTTMUST00000121448.1";
mm10-chrY	HAVANA	exon	83117631	83118326	.	-	.	gene_id "ENSMUSG00000101582.1"; transcript_id "ENSMUST00000186601.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28828"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28828-201"; exon_number 1; exon_id "ENSMUSE00001327640.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046813.1"; havana_transcript "OTTMUST00000121448.1";
mm10-chrY	HAVANA	gene	83154640	83154954	.	-	.	gene_id "ENSMUSG00000101273.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28831"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046814.1";
mm10-chrY	HAVANA	transcript	83154640	83154954	.	-	.	gene_id "ENSMUSG00000101273.1"; transcript_id "ENSMUST00000187739.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28831"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28831-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046814.1"; havana_transcript "OTTMUST00000121449.1";
mm10-chrY	HAVANA	exon	83154640	83154954	.	-	.	gene_id "ENSMUSG00000101273.1"; transcript_id "ENSMUST00000187739.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28831"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28831-201"; exon_number 1; exon_id "ENSMUSE00001321184.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046814.1"; havana_transcript "OTTMUST00000121449.1";
mm10-chrY	HAVANA	gene	83191727	83194964	.	+	.	gene_id "ENSMUSG00000101508.1"; gene_type "lincRNA"; gene_name "Gm28832"; level 2; havana_gene "OTTMUSG00000046815.1";
mm10-chrY	HAVANA	transcript	83191727	83194964	.	+	.	gene_id "ENSMUSG00000101508.1"; transcript_id "ENSMUST00000188603.1"; gene_type "lincRNA"; gene_name "Gm28832"; transcript_type "lincRNA"; transcript_name "Gm28832-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046815.1"; havana_transcript "OTTMUST00000121450.1";
mm10-chrY	HAVANA	exon	83191727	83192365	.	+	.	gene_id "ENSMUSG00000101508.1"; transcript_id "ENSMUST00000188603.1"; gene_type "lincRNA"; gene_name "Gm28832"; transcript_type "lincRNA"; transcript_name "Gm28832-201"; exon_number 1; exon_id "ENSMUSE00001319848.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046815.1"; havana_transcript "OTTMUST00000121450.1";
mm10-chrY	HAVANA	exon	83192851	83193036	.	+	.	gene_id "ENSMUSG00000101508.1"; transcript_id "ENSMUST00000188603.1"; gene_type "lincRNA"; gene_name "Gm28832"; transcript_type "lincRNA"; transcript_name "Gm28832-201"; exon_number 2; exon_id "ENSMUSE00001331756.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046815.1"; havana_transcript "OTTMUST00000121450.1";
mm10-chrY	HAVANA	exon	83193766	83193949	.	+	.	gene_id "ENSMUSG00000101508.1"; transcript_id "ENSMUST00000188603.1"; gene_type "lincRNA"; gene_name "Gm28832"; transcript_type "lincRNA"; transcript_name "Gm28832-201"; exon_number 3; exon_id "ENSMUSE00001318966.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046815.1"; havana_transcript "OTTMUST00000121450.1";
mm10-chrY	HAVANA	exon	83194476	83194964	.	+	.	gene_id "ENSMUSG00000101508.1"; transcript_id "ENSMUST00000188603.1"; gene_type "lincRNA"; gene_name "Gm28832"; transcript_type "lincRNA"; transcript_name "Gm28832-201"; exon_number 4; exon_id "ENSMUSE00001326238.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046815.1"; havana_transcript "OTTMUST00000121450.1";
mm10-chrY	HAVANA	transcript	83192180	83194540	.	+	.	gene_id "ENSMUSG00000101508.1"; transcript_id "ENSMUST00000190616.1"; gene_type "lincRNA"; gene_name "Gm28832"; transcript_type "lincRNA"; transcript_name "Gm28832-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046815.1"; havana_transcript "OTTMUST00000121451.1";
mm10-chrY	HAVANA	exon	83192180	83192365	.	+	.	gene_id "ENSMUSG00000101508.1"; transcript_id "ENSMUST00000190616.1"; gene_type "lincRNA"; gene_name "Gm28832"; transcript_type "lincRNA"; transcript_name "Gm28832-202"; exon_number 1; exon_id "ENSMUSE00001326185.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046815.1"; havana_transcript "OTTMUST00000121451.1";
mm10-chrY	HAVANA	exon	83192855	83193036	.	+	.	gene_id "ENSMUSG00000101508.1"; transcript_id "ENSMUST00000190616.1"; gene_type "lincRNA"; gene_name "Gm28832"; transcript_type "lincRNA"; transcript_name "Gm28832-202"; exon_number 2; exon_id "ENSMUSE00001319719.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046815.1"; havana_transcript "OTTMUST00000121451.1";
mm10-chrY	HAVANA	exon	83194476	83194540	.	+	.	gene_id "ENSMUSG00000101508.1"; transcript_id "ENSMUST00000190616.1"; gene_type "lincRNA"; gene_name "Gm28832"; transcript_type "lincRNA"; transcript_name "Gm28832-202"; exon_number 3; exon_id "ENSMUSE00001331688.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046815.1"; havana_transcript "OTTMUST00000121451.1";
mm10-chrY	HAVANA	gene	83287884	83288579	.	-	.	gene_id "ENSMUSG00000100339.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21864"; level 2; havana_gene "OTTMUSG00000046827.1";
mm10-chrY	HAVANA	transcript	83287884	83288579	.	-	.	gene_id "ENSMUSG00000100339.1"; transcript_id "ENSMUST00000187269.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21864"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21864-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046827.1"; havana_transcript "OTTMUST00000121466.1";
mm10-chrY	HAVANA	exon	83287884	83288579	.	-	.	gene_id "ENSMUSG00000100339.1"; transcript_id "ENSMUST00000187269.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21864"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21864-201"; exon_number 1; exon_id "ENSMUSE00001318067.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046827.1"; havana_transcript "OTTMUST00000121466.1";
mm10-chrY	HAVANA	gene	83361686	83362381	.	-	.	gene_id "ENSMUSG00000099546.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21802"; level 2; havana_gene "OTTMUSG00000046828.1";
mm10-chrY	HAVANA	transcript	83361686	83362381	.	-	.	gene_id "ENSMUSG00000099546.1"; transcript_id "ENSMUST00000190593.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21802"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21802-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046828.1"; havana_transcript "OTTMUST00000121467.1";
mm10-chrY	HAVANA	exon	83361686	83362381	.	-	.	gene_id "ENSMUSG00000099546.1"; transcript_id "ENSMUST00000190593.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21802"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21802-201"; exon_number 1; exon_id "ENSMUSE00001324049.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046828.1"; havana_transcript "OTTMUST00000121467.1";
mm10-chrY	HAVANA	gene	83390832	83391446	.	-	.	gene_id "ENSMUSG00000101884.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28658"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046829.1";
mm10-chrY	HAVANA	transcript	83390832	83391446	.	-	.	gene_id "ENSMUSG00000101884.1"; transcript_id "ENSMUST00000191532.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28658"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28658-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046829.1"; havana_transcript "OTTMUST00000121468.1";
mm10-chrY	HAVANA	exon	83390832	83391446	.	-	.	gene_id "ENSMUSG00000101884.1"; transcript_id "ENSMUST00000191532.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28658"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28658-201"; exon_number 1; exon_id "ENSMUSE00001324606.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046829.1"; havana_transcript "OTTMUST00000121468.1";
mm10-chrY	HAVANA	gene	83427709	83428403	.	-	.	gene_id "ENSMUSG00000100906.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29238"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046830.1";
mm10-chrY	HAVANA	transcript	83427709	83428403	.	-	.	gene_id "ENSMUSG00000100906.1"; transcript_id "ENSMUST00000189709.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29238"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29238-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046830.1"; havana_transcript "OTTMUST00000121469.1";
mm10-chrY	HAVANA	exon	83427709	83428403	.	-	.	gene_id "ENSMUSG00000100906.1"; transcript_id "ENSMUST00000189709.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29238"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29238-201"; exon_number 1; exon_id "ENSMUSE00001327047.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046830.1"; havana_transcript "OTTMUST00000121469.1";
mm10-chrY	HAVANA	gene	83537567	83551484	.	+	.	gene_id "ENSMUSG00000100092.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21088"; level 2; havana_gene "OTTMUSG00000046831.1";
mm10-chrY	HAVANA	transcript	83537567	83551484	.	+	.	gene_id "ENSMUSG00000100092.1"; transcript_id "ENSMUST00000190875.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21088"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21088-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046831.1"; havana_transcript "OTTMUST00000121470.1";
mm10-chrY	HAVANA	exon	83537567	83537684	.	+	.	gene_id "ENSMUSG00000100092.1"; transcript_id "ENSMUST00000190875.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21088"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21088-201"; exon_number 1; exon_id "ENSMUSE00001336036.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046831.1"; havana_transcript "OTTMUST00000121470.1";
mm10-chrY	HAVANA	exon	83543020	83543086	.	+	.	gene_id "ENSMUSG00000100092.1"; transcript_id "ENSMUST00000190875.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21088"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21088-201"; exon_number 2; exon_id "ENSMUSE00001333885.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046831.1"; havana_transcript "OTTMUST00000121470.1";
mm10-chrY	HAVANA	exon	83543760	83543794	.	+	.	gene_id "ENSMUSG00000100092.1"; transcript_id "ENSMUST00000190875.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21088"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21088-201"; exon_number 3; exon_id "ENSMUSE00001326230.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046831.1"; havana_transcript "OTTMUST00000121470.1";
mm10-chrY	HAVANA	exon	83550813	83550879	.	+	.	gene_id "ENSMUSG00000100092.1"; transcript_id "ENSMUST00000190875.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21088"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21088-201"; exon_number 4; exon_id "ENSMUSE00001332494.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046831.1"; havana_transcript "OTTMUST00000121470.1";
mm10-chrY	HAVANA	exon	83551456	83551484	.	+	.	gene_id "ENSMUSG00000100092.1"; transcript_id "ENSMUST00000190875.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21088"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21088-201"; exon_number 5; exon_id "ENSMUSE00001324784.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046831.1"; havana_transcript "OTTMUST00000121470.1";
mm10-chrY	HAVANA	gene	83617440	83618135	.	-	.	gene_id "ENSMUSG00000100284.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29239"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046832.1";
mm10-chrY	HAVANA	transcript	83617440	83618135	.	-	.	gene_id "ENSMUSG00000100284.1"; transcript_id "ENSMUST00000190304.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29239"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29239-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046832.1"; havana_transcript "OTTMUST00000121471.1";
mm10-chrY	HAVANA	exon	83617440	83618135	.	-	.	gene_id "ENSMUSG00000100284.1"; transcript_id "ENSMUST00000190304.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29239"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29239-201"; exon_number 1; exon_id "ENSMUSE00001323519.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046832.1"; havana_transcript "OTTMUST00000121471.1";
mm10-chrY	ENSEMBL	gene	83675342	83675449	.	-	.	gene_id "ENSMUSG00000096523.1"; gene_type "rRNA"; gene_name "Gm25729"; level 3;
mm10-chrY	ENSEMBL	transcript	83675342	83675449	.	-	.	gene_id "ENSMUSG00000096523.1"; transcript_id "ENSMUST00000179050.1"; gene_type "rRNA"; gene_name "Gm25729"; transcript_type "rRNA"; transcript_name "Gm25729-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	83675342	83675449	.	-	.	gene_id "ENSMUSG00000096523.1"; transcript_id "ENSMUST00000179050.1"; gene_type "rRNA"; gene_name "Gm25729"; transcript_type "rRNA"; transcript_name "Gm25729-201"; exon_number 1; exon_id "ENSMUSE00001036265.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	83715087	83715782	.	-	.	gene_id "ENSMUSG00000100986.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21741"; level 2; havana_gene "OTTMUSG00000046833.1";
mm10-chrY	HAVANA	transcript	83715087	83715782	.	-	.	gene_id "ENSMUSG00000100986.1"; transcript_id "ENSMUST00000185883.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21741"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21741-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046833.1"; havana_transcript "OTTMUST00000121472.1";
mm10-chrY	HAVANA	exon	83715087	83715782	.	-	.	gene_id "ENSMUSG00000100986.1"; transcript_id "ENSMUST00000185883.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21741"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21741-201"; exon_number 1; exon_id "ENSMUSE00001331990.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046833.1"; havana_transcript "OTTMUST00000121472.1";
mm10-chrY	HAVANA	gene	83789871	83790566	.	-	.	gene_id "ENSMUSG00000101718.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20862"; level 2; havana_gene "OTTMUSG00000046834.1";
mm10-chrY	HAVANA	transcript	83789871	83790566	.	-	.	gene_id "ENSMUSG00000101718.1"; transcript_id "ENSMUST00000191559.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20862"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20862-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046834.1"; havana_transcript "OTTMUST00000121473.1";
mm10-chrY	HAVANA	exon	83789871	83790566	.	-	.	gene_id "ENSMUSG00000101718.1"; transcript_id "ENSMUST00000191559.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20862"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20862-201"; exon_number 1; exon_id "ENSMUSE00001323314.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046834.1"; havana_transcript "OTTMUST00000121473.1";
mm10-chrY	ENSEMBL	gene	83812588	83812695	.	-	.	gene_id "ENSMUSG00000094454.1"; gene_type "rRNA"; gene_name "Gm22624"; level 3;
mm10-chrY	ENSEMBL	transcript	83812588	83812695	.	-	.	gene_id "ENSMUSG00000094454.1"; transcript_id "ENSMUST00000179913.1"; gene_type "rRNA"; gene_name "Gm22624"; transcript_type "rRNA"; transcript_name "Gm22624-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	83812588	83812695	.	-	.	gene_id "ENSMUSG00000094454.1"; transcript_id "ENSMUST00000179913.1"; gene_type "rRNA"; gene_name "Gm22624"; transcript_type "rRNA"; transcript_name "Gm22624-201"; exon_number 1; exon_id "ENSMUSE00001077049.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	83852364	83853059	.	-	.	gene_id "ENSMUSG00000099736.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20863"; level 2; havana_gene "OTTMUSG00000046835.1";
mm10-chrY	HAVANA	transcript	83852364	83853059	.	-	.	gene_id "ENSMUSG00000099736.1"; transcript_id "ENSMUST00000188992.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20863"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20863-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046835.1"; havana_transcript "OTTMUST00000121474.1";
mm10-chrY	HAVANA	exon	83852364	83853059	.	-	.	gene_id "ENSMUSG00000099736.1"; transcript_id "ENSMUST00000188992.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20863"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20863-201"; exon_number 1; exon_id "ENSMUSE00001335718.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046835.1"; havana_transcript "OTTMUST00000121474.1";
mm10-chrY	HAVANA	gene	83927040	83927735	.	-	.	gene_id "ENSMUSG00000101657.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20864"; level 2; havana_gene "OTTMUSG00000046868.1";
mm10-chrY	HAVANA	transcript	83927040	83927735	.	-	.	gene_id "ENSMUSG00000101657.1"; transcript_id "ENSMUST00000188075.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20864"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20864-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046868.1"; havana_transcript "OTTMUST00000121536.1";
mm10-chrY	HAVANA	exon	83927040	83927735	.	-	.	gene_id "ENSMUSG00000101657.1"; transcript_id "ENSMUST00000188075.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20864"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20864-201"; exon_number 1; exon_id "ENSMUSE00001332183.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046868.1"; havana_transcript "OTTMUST00000121536.1";
mm10-chrY	HAVANA	gene	83956703	83957317	.	-	.	gene_id "ENSMUSG00000100740.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29476"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046869.1";
mm10-chrY	HAVANA	transcript	83956703	83957317	.	-	.	gene_id "ENSMUSG00000100740.1"; transcript_id "ENSMUST00000188397.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29476"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29476-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046869.1"; havana_transcript "OTTMUST00000121537.1";
mm10-chrY	HAVANA	exon	83956703	83957317	.	-	.	gene_id "ENSMUSG00000100740.1"; transcript_id "ENSMUST00000188397.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29476"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29476-201"; exon_number 1; exon_id "ENSMUSE00001330879.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046869.1"; havana_transcript "OTTMUST00000121537.1";
mm10-chrY	HAVANA	gene	83993652	83994347	.	-	.	gene_id "ENSMUSG00000100718.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21717"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046870.1";
mm10-chrY	HAVANA	transcript	83993652	83994347	.	-	.	gene_id "ENSMUSG00000100718.1"; transcript_id "ENSMUST00000189902.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21717"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21717-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046870.1"; havana_transcript "OTTMUST00000121538.1";
mm10-chrY	HAVANA	exon	83993652	83994347	.	-	.	gene_id "ENSMUSG00000100718.1"; transcript_id "ENSMUST00000189902.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21717"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21717-201"; exon_number 1; exon_id "ENSMUSE00001324952.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046870.1"; havana_transcript "OTTMUST00000121538.1";
mm10-chrY	HAVANA	gene	84035192	84038431	.	+	.	gene_id "ENSMUSG00000100407.1"; gene_type "lincRNA"; gene_name "Gm28472"; level 2; havana_gene "OTTMUSG00000046871.1";
mm10-chrY	HAVANA	transcript	84035192	84038431	.	+	.	gene_id "ENSMUSG00000100407.1"; transcript_id "ENSMUST00000190133.1"; gene_type "lincRNA"; gene_name "Gm28472"; transcript_type "lincRNA"; transcript_name "Gm28472-202"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046871.1"; havana_transcript "OTTMUST00000121539.1";
mm10-chrY	HAVANA	exon	84035192	84035831	.	+	.	gene_id "ENSMUSG00000100407.1"; transcript_id "ENSMUST00000190133.1"; gene_type "lincRNA"; gene_name "Gm28472"; transcript_type "lincRNA"; transcript_name "Gm28472-202"; exon_number 1; exon_id "ENSMUSE00001325014.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046871.1"; havana_transcript "OTTMUST00000121539.1";
mm10-chrY	HAVANA	exon	84036317	84036502	.	+	.	gene_id "ENSMUSG00000100407.1"; transcript_id "ENSMUST00000190133.1"; gene_type "lincRNA"; gene_name "Gm28472"; transcript_type "lincRNA"; transcript_name "Gm28472-202"; exon_number 2; exon_id "ENSMUSE00001320980.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046871.1"; havana_transcript "OTTMUST00000121539.1";
mm10-chrY	HAVANA	exon	84037232	84037415	.	+	.	gene_id "ENSMUSG00000100407.1"; transcript_id "ENSMUST00000190133.1"; gene_type "lincRNA"; gene_name "Gm28472"; transcript_type "lincRNA"; transcript_name "Gm28472-202"; exon_number 3; exon_id "ENSMUSE00001320629.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046871.1"; havana_transcript "OTTMUST00000121539.1";
mm10-chrY	HAVANA	exon	84037943	84038431	.	+	.	gene_id "ENSMUSG00000100407.1"; transcript_id "ENSMUST00000190133.1"; gene_type "lincRNA"; gene_name "Gm28472"; transcript_type "lincRNA"; transcript_name "Gm28472-202"; exon_number 4; exon_id "ENSMUSE00001326210.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046871.1"; havana_transcript "OTTMUST00000121539.1";
mm10-chrY	HAVANA	transcript	84035645	84038011	.	+	.	gene_id "ENSMUSG00000100407.1"; transcript_id "ENSMUST00000189995.1"; gene_type "lincRNA"; gene_name "Gm28472"; transcript_type "lincRNA"; transcript_name "Gm28472-201"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046871.1"; havana_transcript "OTTMUST00000121540.1";
mm10-chrY	HAVANA	exon	84035645	84035831	.	+	.	gene_id "ENSMUSG00000100407.1"; transcript_id "ENSMUST00000189995.1"; gene_type "lincRNA"; gene_name "Gm28472"; transcript_type "lincRNA"; transcript_name "Gm28472-201"; exon_number 1; exon_id "ENSMUSE00001325123.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046871.1"; havana_transcript "OTTMUST00000121540.1";
mm10-chrY	HAVANA	exon	84036321	84036502	.	+	.	gene_id "ENSMUSG00000100407.1"; transcript_id "ENSMUST00000189995.1"; gene_type "lincRNA"; gene_name "Gm28472"; transcript_type "lincRNA"; transcript_name "Gm28472-201"; exon_number 2; exon_id "ENSMUSE00001331506.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046871.1"; havana_transcript "OTTMUST00000121540.1";
mm10-chrY	HAVANA	exon	84037943	84038011	.	+	.	gene_id "ENSMUSG00000100407.1"; transcript_id "ENSMUST00000189995.1"; gene_type "lincRNA"; gene_name "Gm28472"; transcript_type "lincRNA"; transcript_name "Gm28472-201"; exon_number 3; exon_id "ENSMUSE00001334057.1"; level 2; transcript_support_level "5"; havana_gene "OTTMUSG00000046871.1"; havana_transcript "OTTMUST00000121540.1";
mm10-chrY	HAVANA	gene	84097279	84123494	.	+	.	gene_id "ENSMUSG00000095153.7"; gene_type "protein_coding"; gene_name "Gm21095"; level 2; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	HAVANA	transcript	84097279	84123494	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	exon	84097279	84097322	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 1; exon_id "ENSMUSE00001326184.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	exon	84098688	84098819	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 2; exon_id "ENSMUSE00001335660.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	CDS	84098702	84098819	.	+	0	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 2; exon_id "ENSMUSE00001335660.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	start_codon	84098702	84098704	.	+	0	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 2; exon_id "ENSMUSE00001335660.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	exon	84104156	84104222	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 3; exon_id "ENSMUSE00001010786.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	CDS	84104156	84104222	.	+	2	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 3; exon_id "ENSMUSE00001010786.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	exon	84104866	84104900	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 4; exon_id "ENSMUSE00001025732.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	CDS	84104866	84104900	.	+	1	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 4; exon_id "ENSMUSE00001025732.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	exon	84111923	84111989	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 5; exon_id "ENSMUSE00001062232.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	CDS	84111923	84111989	.	+	2	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 5; exon_id "ENSMUSE00001062232.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	exon	84112570	84112604	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 6; exon_id "ENSMUSE00001072573.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	CDS	84112570	84112604	.	+	1	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 6; exon_id "ENSMUSE00001072573.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	exon	84119765	84119882	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 7; exon_id "ENSMUSE00001077450.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	CDS	84119765	84119882	.	+	2	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 7; exon_id "ENSMUSE00001077450.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	exon	84120679	84120778	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 8; exon_id "ENSMUSE00001320437.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	CDS	84120679	84120778	.	+	1	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 8; exon_id "ENSMUSE00001320437.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	exon	84122811	84122909	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 9; exon_id "ENSMUSE00001327541.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	CDS	84122811	84122909	.	+	0	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 9; exon_id "ENSMUSE00001327541.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	exon	84123269	84123494	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 10; exon_id "ENSMUSE00001318943.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	CDS	84123269	84123295	.	+	0	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 10; exon_id "ENSMUSE00001318943.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	stop_codon	84123296	84123298	.	+	0	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 10; exon_id "ENSMUSE00001318943.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	UTR	84097279	84097322	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 1; exon_id "ENSMUSE00001326184.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	UTR	84098688	84098701	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 2; exon_id "ENSMUSE00001335660.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	HAVANA	UTR	84123296	84123494	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000185776.6"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-202"; exon_number 10; exon_id "ENSMUSE00001318943.1"; level 2; protein_id "ENSMUSP00000140431.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046872.1"; havana_transcript "OTTMUST00000121541.1";
mm10-chrY	ENSEMBL	transcript	84098711	84120745	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	exon	84098711	84098819	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 1; exon_id "ENSMUSE00001094100.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	CDS	84098711	84098819	.	+	0	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 1; exon_id "ENSMUSE00001094100.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	start_codon	84098711	84098713	.	+	0	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 1; exon_id "ENSMUSE00001094100.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	exon	84104156	84104222	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 2; exon_id "ENSMUSE00001010786.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	CDS	84104156	84104222	.	+	2	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 2; exon_id "ENSMUSE00001010786.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	exon	84104866	84104900	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 3; exon_id "ENSMUSE00001025732.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	CDS	84104866	84104900	.	+	1	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 3; exon_id "ENSMUSE00001025732.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	exon	84111923	84111989	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 4; exon_id "ENSMUSE00001062232.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	CDS	84111923	84111989	.	+	2	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 4; exon_id "ENSMUSE00001062232.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	exon	84112570	84112604	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 5; exon_id "ENSMUSE00001072573.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	CDS	84112570	84112604	.	+	1	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 5; exon_id "ENSMUSE00001072573.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	exon	84119765	84119882	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 6; exon_id "ENSMUSE00001077450.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	CDS	84119765	84119882	.	+	2	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 6; exon_id "ENSMUSE00001077450.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	exon	84120679	84120745	.	+	.	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 7; exon_id "ENSMUSE00001021928.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	ENSEMBL	CDS	84120679	84120745	.	+	1	gene_id "ENSMUSG00000095153.7"; transcript_id "ENSMUST00000177775.1"; gene_type "protein_coding"; gene_name "Gm21095"; transcript_type "protein_coding"; transcript_name "Gm21095-201"; exon_number 7; exon_id "ENSMUSE00001021928.1"; level 3; protein_id "ENSMUSP00000136961.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046872.1";
mm10-chrY	HAVANA	gene	84183656	84184351	.	-	.	gene_id "ENSMUSG00000100946.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28473"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046873.1";
mm10-chrY	HAVANA	transcript	84183656	84184351	.	-	.	gene_id "ENSMUSG00000100946.1"; transcript_id "ENSMUST00000187325.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28473"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28473-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046873.1"; havana_transcript "OTTMUST00000121542.1";
mm10-chrY	HAVANA	exon	84183656	84184351	.	-	.	gene_id "ENSMUSG00000100946.1"; transcript_id "ENSMUST00000187325.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28473"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28473-201"; exon_number 1; exon_id "ENSMUSE00001329317.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046873.1"; havana_transcript "OTTMUST00000121542.1";
mm10-chrY	HAVANA	gene	84220600	84220914	.	-	.	gene_id "ENSMUSG00000101851.1"; gene_type "processed_pseudogene"; gene_name "Gm28474"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046874.1";
mm10-chrY	HAVANA	transcript	84220600	84220914	.	-	.	gene_id "ENSMUSG00000101851.1"; transcript_id "ENSMUST00000188501.1"; gene_type "processed_pseudogene"; gene_name "Gm28474"; transcript_type "processed_pseudogene"; transcript_name "Gm28474-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046874.1"; havana_transcript "OTTMUST00000121543.1";
mm10-chrY	HAVANA	exon	84220600	84220914	.	-	.	gene_id "ENSMUSG00000101851.1"; transcript_id "ENSMUST00000188501.1"; gene_type "processed_pseudogene"; gene_name "Gm28474"; transcript_type "processed_pseudogene"; transcript_name "Gm28474-201"; exon_number 1; exon_id "ENSMUSE00001328449.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046874.1"; havana_transcript "OTTMUST00000121543.1";
mm10-chrY	HAVANA	gene	84257641	84260877	.	+	.	gene_id "ENSMUSG00000100531.1"; gene_type "lincRNA"; gene_name "Gm28475"; level 2; havana_gene "OTTMUSG00000046875.1";
mm10-chrY	HAVANA	transcript	84257641	84260877	.	+	.	gene_id "ENSMUSG00000100531.1"; transcript_id "ENSMUST00000187645.1"; gene_type "lincRNA"; gene_name "Gm28475"; transcript_type "lincRNA"; transcript_name "Gm28475-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046875.1"; havana_transcript "OTTMUST00000121544.1";
mm10-chrY	HAVANA	exon	84257641	84258278	.	+	.	gene_id "ENSMUSG00000100531.1"; transcript_id "ENSMUST00000187645.1"; gene_type "lincRNA"; gene_name "Gm28475"; transcript_type "lincRNA"; transcript_name "Gm28475-201"; exon_number 1; exon_id "ENSMUSE00001329396.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046875.1"; havana_transcript "OTTMUST00000121544.1";
mm10-chrY	HAVANA	exon	84258764	84258949	.	+	.	gene_id "ENSMUSG00000100531.1"; transcript_id "ENSMUST00000187645.1"; gene_type "lincRNA"; gene_name "Gm28475"; transcript_type "lincRNA"; transcript_name "Gm28475-201"; exon_number 2; exon_id "ENSMUSE00001325765.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046875.1"; havana_transcript "OTTMUST00000121544.1";
mm10-chrY	HAVANA	exon	84259679	84259862	.	+	.	gene_id "ENSMUSG00000100531.1"; transcript_id "ENSMUST00000187645.1"; gene_type "lincRNA"; gene_name "Gm28475"; transcript_type "lincRNA"; transcript_name "Gm28475-201"; exon_number 3; exon_id "ENSMUSE00001323213.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046875.1"; havana_transcript "OTTMUST00000121544.1";
mm10-chrY	HAVANA	exon	84260389	84260877	.	+	.	gene_id "ENSMUSG00000100531.1"; transcript_id "ENSMUST00000187645.1"; gene_type "lincRNA"; gene_name "Gm28475"; transcript_type "lincRNA"; transcript_name "Gm28475-201"; exon_number 4; exon_id "ENSMUSE00001328995.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046875.1"; havana_transcript "OTTMUST00000121544.1";
mm10-chrY	HAVANA	transcript	84258093	84260457	.	+	.	gene_id "ENSMUSG00000100531.1"; transcript_id "ENSMUST00000190299.1"; gene_type "lincRNA"; gene_name "Gm28475"; transcript_type "lincRNA"; transcript_name "Gm28475-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046875.1"; havana_transcript "OTTMUST00000121545.1";
mm10-chrY	HAVANA	exon	84258093	84258278	.	+	.	gene_id "ENSMUSG00000100531.1"; transcript_id "ENSMUST00000190299.1"; gene_type "lincRNA"; gene_name "Gm28475"; transcript_type "lincRNA"; transcript_name "Gm28475-202"; exon_number 1; exon_id "ENSMUSE00001324841.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046875.1"; havana_transcript "OTTMUST00000121545.1";
mm10-chrY	HAVANA	exon	84258768	84258949	.	+	.	gene_id "ENSMUSG00000100531.1"; transcript_id "ENSMUST00000190299.1"; gene_type "lincRNA"; gene_name "Gm28475"; transcript_type "lincRNA"; transcript_name "Gm28475-202"; exon_number 2; exon_id "ENSMUSE00001322268.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046875.1"; havana_transcript "OTTMUST00000121545.1";
mm10-chrY	HAVANA	exon	84260389	84260457	.	+	.	gene_id "ENSMUSG00000100531.1"; transcript_id "ENSMUST00000190299.1"; gene_type "lincRNA"; gene_name "Gm28475"; transcript_type "lincRNA"; transcript_name "Gm28475-202"; exon_number 3; exon_id "ENSMUSE00001332840.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046875.1"; havana_transcript "OTTMUST00000121545.1";
mm10-chrY	HAVANA	gene	84365555	84366250	.	-	.	gene_id "ENSMUSG00000099483.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28476"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046876.1";
mm10-chrY	HAVANA	transcript	84365555	84366250	.	-	.	gene_id "ENSMUSG00000099483.1"; transcript_id "ENSMUST00000190540.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28476"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28476-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046876.1"; havana_transcript "OTTMUST00000121546.1";
mm10-chrY	HAVANA	exon	84365555	84366250	.	-	.	gene_id "ENSMUSG00000099483.1"; transcript_id "ENSMUST00000190540.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28476"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28476-201"; exon_number 1; exon_id "ENSMUSE00001318980.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046876.1"; havana_transcript "OTTMUST00000121546.1";
mm10-chrY	HAVANA	gene	84440269	84440964	.	-	.	gene_id "ENSMUSG00000101742.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21380"; level 2; havana_gene "OTTMUSG00000046877.1";
mm10-chrY	HAVANA	transcript	84440269	84440964	.	-	.	gene_id "ENSMUSG00000101742.1"; transcript_id "ENSMUST00000189621.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21380"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21380-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046877.1"; havana_transcript "OTTMUST00000121547.1";
mm10-chrY	HAVANA	exon	84440269	84440964	.	-	.	gene_id "ENSMUSG00000101742.1"; transcript_id "ENSMUST00000189621.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21380"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21380-201"; exon_number 1; exon_id "ENSMUSE00001322593.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046877.1"; havana_transcript "OTTMUST00000121547.1";
mm10-chrY	HAVANA	gene	84489103	84489780	.	-	.	gene_id "ENSMUSG00000100024.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21782"; level 2; havana_gene "OTTMUSG00000046878.1";
mm10-chrY	HAVANA	transcript	84489103	84489780	.	-	.	gene_id "ENSMUSG00000100024.1"; transcript_id "ENSMUST00000188517.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21782"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21782-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046878.1"; havana_transcript "OTTMUST00000121549.1";
mm10-chrY	HAVANA	exon	84489103	84489780	.	-	.	gene_id "ENSMUSG00000100024.1"; transcript_id "ENSMUST00000188517.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21782"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21782-201"; exon_number 1; exon_id "ENSMUSE00001325059.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046878.1"; havana_transcript "OTTMUST00000121549.1";
mm10-chrY	HAVANA	gene	84562572	84564907	.	-	.	gene_id "ENSMUSG00000094660.2"; gene_type "protein_coding"; gene_name "Gm21394"; level 2; havana_gene "OTTMUSG00000045415.1";
mm10-chrY	HAVANA	transcript	84562572	84564907	.	-	.	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000189463.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-202"; level 2; protein_id "ENSMUSP00000141090.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1"; havana_transcript "OTTMUST00000119178.1";
mm10-chrY	HAVANA	exon	84564789	84564907	.	-	.	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000189463.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-202"; exon_number 1; exon_id "ENSMUSE00001331644.1"; level 2; protein_id "ENSMUSP00000141090.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1"; havana_transcript "OTTMUST00000119178.1";
mm10-chrY	HAVANA	exon	84562572	84563675	.	-	.	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000189463.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-202"; exon_number 2; exon_id "ENSMUSE00001319847.1"; level 2; protein_id "ENSMUSP00000141090.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1"; havana_transcript "OTTMUST00000119178.1";
mm10-chrY	HAVANA	CDS	84562714	84563394	.	-	0	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000189463.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-202"; exon_number 2; exon_id "ENSMUSE00001319847.1"; level 2; protein_id "ENSMUSP00000141090.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1"; havana_transcript "OTTMUST00000119178.1";
mm10-chrY	HAVANA	start_codon	84563392	84563394	.	-	0	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000189463.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-202"; exon_number 2; exon_id "ENSMUSE00001319847.1"; level 2; protein_id "ENSMUSP00000141090.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1"; havana_transcript "OTTMUST00000119178.1";
mm10-chrY	HAVANA	stop_codon	84562711	84562713	.	-	0	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000189463.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-202"; exon_number 2; exon_id "ENSMUSE00001319847.1"; level 2; protein_id "ENSMUSP00000141090.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1"; havana_transcript "OTTMUST00000119178.1";
mm10-chrY	HAVANA	UTR	84564789	84564907	.	-	.	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000189463.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-202"; exon_number 1; exon_id "ENSMUSE00001331644.1"; level 2; protein_id "ENSMUSP00000141090.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1"; havana_transcript "OTTMUST00000119178.1";
mm10-chrY	HAVANA	UTR	84562572	84562713	.	-	.	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000189463.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-202"; exon_number 2; exon_id "ENSMUSE00001319847.1"; level 2; protein_id "ENSMUSP00000141090.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1"; havana_transcript "OTTMUST00000119178.1";
mm10-chrY	HAVANA	UTR	84563395	84563675	.	-	.	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000189463.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-202"; exon_number 2; exon_id "ENSMUSE00001319847.1"; level 2; protein_id "ENSMUSP00000141090.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1"; havana_transcript "OTTMUST00000119178.1";
mm10-chrY	ENSEMBL	transcript	84562711	84563394	.	-	.	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000179523.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-201"; level 3; protein_id "ENSMUSP00000136571.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1";
mm10-chrY	ENSEMBL	exon	84562711	84563394	.	-	.	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000179523.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-201"; exon_number 1; exon_id "ENSMUSE00000981183.1"; level 3; protein_id "ENSMUSP00000136571.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1";
mm10-chrY	ENSEMBL	CDS	84562714	84563394	.	-	0	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000179523.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-201"; exon_number 1; exon_id "ENSMUSE00000981183.1"; level 3; protein_id "ENSMUSP00000136571.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1";
mm10-chrY	ENSEMBL	start_codon	84563392	84563394	.	-	0	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000179523.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-201"; exon_number 1; exon_id "ENSMUSE00000981183.1"; level 3; protein_id "ENSMUSP00000136571.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1";
mm10-chrY	ENSEMBL	stop_codon	84562711	84562713	.	-	0	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000179523.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-201"; exon_number 1; exon_id "ENSMUSE00000981183.1"; level 3; protein_id "ENSMUSP00000136571.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1";
mm10-chrY	ENSEMBL	UTR	84562711	84562713	.	-	.	gene_id "ENSMUSG00000094660.2"; transcript_id "ENSMUST00000179523.1"; gene_type "protein_coding"; gene_name "Gm21394"; transcript_type "protein_coding"; transcript_name "Gm21394-201"; exon_number 1; exon_id "ENSMUSE00000981183.1"; level 3; protein_id "ENSMUSP00000136571.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000045415.1";
mm10-chrY	HAVANA	gene	84591832	84592446	.	-	.	gene_id "ENSMUSG00000101052.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28471"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046879.1";
mm10-chrY	HAVANA	transcript	84591832	84592446	.	-	.	gene_id "ENSMUSG00000101052.1"; transcript_id "ENSMUST00000185994.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28471"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28471-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046879.1"; havana_transcript "OTTMUST00000121550.1";
mm10-chrY	HAVANA	exon	84591832	84592446	.	-	.	gene_id "ENSMUSG00000101052.1"; transcript_id "ENSMUST00000185994.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28471"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28471-201"; exon_number 1; exon_id "ENSMUSE00001334045.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046879.1"; havana_transcript "OTTMUST00000121550.1";
mm10-chrY	HAVANA	gene	84628700	84629395	.	-	.	gene_id "ENSMUSG00000100881.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21824"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046906.1";
mm10-chrY	HAVANA	transcript	84628700	84629395	.	-	.	gene_id "ENSMUSG00000100881.1"; transcript_id "ENSMUST00000186810.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21824"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21824-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046906.1"; havana_transcript "OTTMUST00000121608.1";
mm10-chrY	HAVANA	exon	84628700	84629395	.	-	.	gene_id "ENSMUSG00000100881.1"; transcript_id "ENSMUST00000186810.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21824"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21824-201"; exon_number 1; exon_id "ENSMUSE00001320513.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046906.1"; havana_transcript "OTTMUST00000121608.1";
mm10-chrY	HAVANA	gene	84677587	84680826	.	+	.	gene_id "ENSMUSG00000101160.1"; gene_type "lincRNA"; gene_name "Gm29338"; level 2; havana_gene "OTTMUSG00000046907.1";
mm10-chrY	HAVANA	transcript	84677587	84680826	.	+	.	gene_id "ENSMUSG00000101160.1"; transcript_id "ENSMUST00000189318.1"; gene_type "lincRNA"; gene_name "Gm29338"; transcript_type "lincRNA"; transcript_name "Gm29338-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046907.1"; havana_transcript "OTTMUST00000121609.1";
mm10-chrY	HAVANA	exon	84677587	84678226	.	+	.	gene_id "ENSMUSG00000101160.1"; transcript_id "ENSMUST00000189318.1"; gene_type "lincRNA"; gene_name "Gm29338"; transcript_type "lincRNA"; transcript_name "Gm29338-201"; exon_number 1; exon_id "ENSMUSE00001321823.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046907.1"; havana_transcript "OTTMUST00000121609.1";
mm10-chrY	HAVANA	exon	84678712	84678897	.	+	.	gene_id "ENSMUSG00000101160.1"; transcript_id "ENSMUST00000189318.1"; gene_type "lincRNA"; gene_name "Gm29338"; transcript_type "lincRNA"; transcript_name "Gm29338-201"; exon_number 2; exon_id "ENSMUSE00001321341.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046907.1"; havana_transcript "OTTMUST00000121609.1";
mm10-chrY	HAVANA	exon	84679627	84679810	.	+	.	gene_id "ENSMUSG00000101160.1"; transcript_id "ENSMUST00000189318.1"; gene_type "lincRNA"; gene_name "Gm29338"; transcript_type "lincRNA"; transcript_name "Gm29338-201"; exon_number 3; exon_id "ENSMUSE00001333454.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046907.1"; havana_transcript "OTTMUST00000121609.1";
mm10-chrY	HAVANA	exon	84680338	84680826	.	+	.	gene_id "ENSMUSG00000101160.1"; transcript_id "ENSMUST00000189318.1"; gene_type "lincRNA"; gene_name "Gm29338"; transcript_type "lincRNA"; transcript_name "Gm29338-201"; exon_number 4; exon_id "ENSMUSE00001333090.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046907.1"; havana_transcript "OTTMUST00000121609.1";
mm10-chrY	HAVANA	transcript	84678040	84680406	.	+	.	gene_id "ENSMUSG00000101160.1"; transcript_id "ENSMUST00000190234.1"; gene_type "lincRNA"; gene_name "Gm29338"; transcript_type "lincRNA"; transcript_name "Gm29338-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046907.1"; havana_transcript "OTTMUST00000121610.1";
mm10-chrY	HAVANA	exon	84678040	84678226	.	+	.	gene_id "ENSMUSG00000101160.1"; transcript_id "ENSMUST00000190234.1"; gene_type "lincRNA"; gene_name "Gm29338"; transcript_type "lincRNA"; transcript_name "Gm29338-202"; exon_number 1; exon_id "ENSMUSE00001332109.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046907.1"; havana_transcript "OTTMUST00000121610.1";
mm10-chrY	HAVANA	exon	84678716	84678897	.	+	.	gene_id "ENSMUSG00000101160.1"; transcript_id "ENSMUST00000190234.1"; gene_type "lincRNA"; gene_name "Gm29338"; transcript_type "lincRNA"; transcript_name "Gm29338-202"; exon_number 2; exon_id "ENSMUSE00001320327.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046907.1"; havana_transcript "OTTMUST00000121610.1";
mm10-chrY	HAVANA	exon	84680338	84680406	.	+	.	gene_id "ENSMUSG00000101160.1"; transcript_id "ENSMUST00000190234.1"; gene_type "lincRNA"; gene_name "Gm29338"; transcript_type "lincRNA"; transcript_name "Gm29338-202"; exon_number 3; exon_id "ENSMUSE00001326305.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046907.1"; havana_transcript "OTTMUST00000121610.1";
mm10-chrY	HAVANA	gene	84746685	84772902	.	+	.	gene_id "ENSMUSG00000099840.1"; gene_type "protein_coding"; gene_name "Gm21409"; level 2; havana_gene "OTTMUSG00000046908.1";
mm10-chrY	HAVANA	transcript	84746685	84772902	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	exon	84746685	84746728	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 1; exon_id "ENSMUSE00001334587.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	exon	84748093	84748224	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 2; exon_id "ENSMUSE00001332102.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	CDS	84748107	84748224	.	+	0	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 2; exon_id "ENSMUSE00001332102.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	start_codon	84748107	84748109	.	+	0	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 2; exon_id "ENSMUSE00001332102.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	exon	84753557	84753623	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 3; exon_id "ENSMUSE00001331274.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	CDS	84753557	84753623	.	+	2	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 3; exon_id "ENSMUSE00001331274.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	exon	84754286	84754320	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 4; exon_id "ENSMUSE00001329149.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	CDS	84754286	84754320	.	+	1	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 4; exon_id "ENSMUSE00001329149.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	exon	84761336	84761402	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 5; exon_id "ENSMUSE00001334202.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	CDS	84761336	84761402	.	+	2	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 5; exon_id "ENSMUSE00001334202.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	exon	84761988	84762022	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 6; exon_id "ENSMUSE00001322064.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	CDS	84761988	84762022	.	+	1	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 6; exon_id "ENSMUSE00001322064.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	exon	84769190	84769307	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 7; exon_id "ENSMUSE00001319264.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	CDS	84769190	84769307	.	+	2	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 7; exon_id "ENSMUSE00001319264.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	exon	84770076	84770175	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 8; exon_id "ENSMUSE00001334200.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	CDS	84770076	84770175	.	+	1	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 8; exon_id "ENSMUSE00001334200.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	exon	84772219	84772317	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 9; exon_id "ENSMUSE00001319746.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	CDS	84772219	84772317	.	+	0	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 9; exon_id "ENSMUSE00001319746.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	exon	84772677	84772902	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 10; exon_id "ENSMUSE00001331850.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	CDS	84772677	84772703	.	+	0	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 10; exon_id "ENSMUSE00001331850.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	stop_codon	84772704	84772706	.	+	0	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 10; exon_id "ENSMUSE00001331850.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	UTR	84746685	84746728	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 1; exon_id "ENSMUSE00001334587.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	UTR	84748093	84748106	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 2; exon_id "ENSMUSE00001332102.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	UTR	84772704	84772902	.	+	.	gene_id "ENSMUSG00000099840.1"; transcript_id "ENSMUST00000186110.1"; gene_type "protein_coding"; gene_name "Gm21409"; transcript_type "protein_coding"; transcript_name "Gm21409-201"; exon_number 10; exon_id "ENSMUSE00001331850.1"; level 2; protein_id "ENSMUSP00000140850.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000046908.1"; havana_transcript "OTTMUST00000121611.1";
mm10-chrY	HAVANA	gene	84833330	84834025	.	-	.	gene_id "ENSMUSG00000100951.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29339"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046909.1";
mm10-chrY	HAVANA	transcript	84833330	84834025	.	-	.	gene_id "ENSMUSG00000100951.1"; transcript_id "ENSMUST00000189613.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29339"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29339-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046909.1"; havana_transcript "OTTMUST00000121612.1";
mm10-chrY	HAVANA	exon	84833330	84834025	.	-	.	gene_id "ENSMUSG00000100951.1"; transcript_id "ENSMUST00000189613.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29339"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29339-201"; exon_number 1; exon_id "ENSMUSE00001331055.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046909.1"; havana_transcript "OTTMUST00000121612.1";
mm10-chrY	HAVANA	gene	84870410	84870724	.	-	.	gene_id "ENSMUSG00000101068.1"; gene_type "processed_pseudogene"; gene_name "Gm28759"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046910.1";
mm10-chrY	HAVANA	transcript	84870410	84870724	.	-	.	gene_id "ENSMUSG00000101068.1"; transcript_id "ENSMUST00000187621.1"; gene_type "processed_pseudogene"; gene_name "Gm28759"; transcript_type "processed_pseudogene"; transcript_name "Gm28759-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046910.1"; havana_transcript "OTTMUST00000121613.1";
mm10-chrY	HAVANA	exon	84870410	84870724	.	-	.	gene_id "ENSMUSG00000101068.1"; transcript_id "ENSMUST00000187621.1"; gene_type "processed_pseudogene"; gene_name "Gm28759"; transcript_type "processed_pseudogene"; transcript_name "Gm28759-201"; exon_number 1; exon_id "ENSMUSE00001329698.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046910.1"; havana_transcript "OTTMUST00000121613.1";
mm10-chrY	HAVANA	gene	84872139	84875484	.	-	.	gene_id "ENSMUSG00000101405.1"; gene_type "lincRNA"; gene_name "Gm28758"; level 2; havana_gene "OTTMUSG00000046911.1";
mm10-chrY	HAVANA	transcript	84872139	84875484	.	-	.	gene_id "ENSMUSG00000101405.1"; transcript_id "ENSMUST00000186123.1"; gene_type "lincRNA"; gene_name "Gm28758"; transcript_type "lincRNA"; transcript_name "Gm28758-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046911.1"; havana_transcript "OTTMUST00000121614.1";
mm10-chrY	HAVANA	exon	84875262	84875484	.	-	.	gene_id "ENSMUSG00000101405.1"; transcript_id "ENSMUST00000186123.1"; gene_type "lincRNA"; gene_name "Gm28758"; transcript_type "lincRNA"; transcript_name "Gm28758-201"; exon_number 1; exon_id "ENSMUSE00001322220.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046911.1"; havana_transcript "OTTMUST00000121614.1";
mm10-chrY	HAVANA	exon	84872139	84874082	.	-	.	gene_id "ENSMUSG00000101405.1"; transcript_id "ENSMUST00000186123.1"; gene_type "lincRNA"; gene_name "Gm28758"; transcript_type "lincRNA"; transcript_name "Gm28758-201"; exon_number 2; exon_id "ENSMUSE00001326353.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046911.1"; havana_transcript "OTTMUST00000121614.1";
mm10-chrY	HAVANA	gene	84907473	84910700	.	+	.	gene_id "ENSMUSG00000099633.1"; gene_type "lincRNA"; gene_name "Gm29071"; level 2; havana_gene "OTTMUSG00000046912.1";
mm10-chrY	HAVANA	transcript	84907473	84910700	.	+	.	gene_id "ENSMUSG00000099633.1"; transcript_id "ENSMUST00000185729.1"; gene_type "lincRNA"; gene_name "Gm29071"; transcript_type "lincRNA"; transcript_name "Gm29071-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046912.1"; havana_transcript "OTTMUST00000121615.1";
mm10-chrY	HAVANA	exon	84907473	84908111	.	+	.	gene_id "ENSMUSG00000099633.1"; transcript_id "ENSMUST00000185729.1"; gene_type "lincRNA"; gene_name "Gm29071"; transcript_type "lincRNA"; transcript_name "Gm29071-201"; exon_number 1; exon_id "ENSMUSE00001334773.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046912.1"; havana_transcript "OTTMUST00000121615.1";
mm10-chrY	HAVANA	exon	84908597	84908782	.	+	.	gene_id "ENSMUSG00000099633.1"; transcript_id "ENSMUST00000185729.1"; gene_type "lincRNA"; gene_name "Gm29071"; transcript_type "lincRNA"; transcript_name "Gm29071-201"; exon_number 2; exon_id "ENSMUSE00001323281.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046912.1"; havana_transcript "OTTMUST00000121615.1";
mm10-chrY	HAVANA	exon	84909512	84909695	.	+	.	gene_id "ENSMUSG00000099633.1"; transcript_id "ENSMUST00000185729.1"; gene_type "lincRNA"; gene_name "Gm29071"; transcript_type "lincRNA"; transcript_name "Gm29071-201"; exon_number 3; exon_id "ENSMUSE00001329158.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046912.1"; havana_transcript "OTTMUST00000121615.1";
mm10-chrY	HAVANA	exon	84910222	84910700	.	+	.	gene_id "ENSMUSG00000099633.1"; transcript_id "ENSMUST00000185729.1"; gene_type "lincRNA"; gene_name "Gm29071"; transcript_type "lincRNA"; transcript_name "Gm29071-201"; exon_number 4; exon_id "ENSMUSE00001326167.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046912.1"; havana_transcript "OTTMUST00000121615.1";
mm10-chrY	HAVANA	transcript	84907926	84910290	.	+	.	gene_id "ENSMUSG00000099633.1"; transcript_id "ENSMUST00000190261.1"; gene_type "lincRNA"; gene_name "Gm29071"; transcript_type "lincRNA"; transcript_name "Gm29071-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046912.1"; havana_transcript "OTTMUST00000121616.1";
mm10-chrY	HAVANA	exon	84907926	84908111	.	+	.	gene_id "ENSMUSG00000099633.1"; transcript_id "ENSMUST00000190261.1"; gene_type "lincRNA"; gene_name "Gm29071"; transcript_type "lincRNA"; transcript_name "Gm29071-202"; exon_number 1; exon_id "ENSMUSE00001325723.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046912.1"; havana_transcript "OTTMUST00000121616.1";
mm10-chrY	HAVANA	exon	84908601	84908782	.	+	.	gene_id "ENSMUSG00000099633.1"; transcript_id "ENSMUST00000190261.1"; gene_type "lincRNA"; gene_name "Gm29071"; transcript_type "lincRNA"; transcript_name "Gm29071-202"; exon_number 2; exon_id "ENSMUSE00001329294.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046912.1"; havana_transcript "OTTMUST00000121616.1";
mm10-chrY	HAVANA	exon	84910222	84910290	.	+	.	gene_id "ENSMUSG00000099633.1"; transcript_id "ENSMUST00000190261.1"; gene_type "lincRNA"; gene_name "Gm29071"; transcript_type "lincRNA"; transcript_name "Gm29071-202"; exon_number 3; exon_id "ENSMUSE00001328744.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046912.1"; havana_transcript "OTTMUST00000121616.1";
mm10-chrY	HAVANA	gene	85016800	85017495	.	-	.	gene_id "ENSMUSG00000102079.1"; gene_type "processed_pseudogene"; gene_name "Gm21879"; level 2; havana_gene "OTTMUSG00000046913.1";
mm10-chrY	HAVANA	transcript	85016800	85017495	.	-	.	gene_id "ENSMUSG00000102079.1"; transcript_id "ENSMUST00000187583.1"; gene_type "processed_pseudogene"; gene_name "Gm21879"; transcript_type "processed_pseudogene"; transcript_name "Gm21879-201"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000046913.1"; havana_transcript "OTTMUST00000121617.1";
mm10-chrY	HAVANA	exon	85016800	85017495	.	-	.	gene_id "ENSMUSG00000102079.1"; transcript_id "ENSMUST00000187583.1"; gene_type "processed_pseudogene"; gene_name "Gm21879"; transcript_type "processed_pseudogene"; transcript_name "Gm21879-201"; exon_number 1; exon_id "ENSMUSE00001331713.1"; level 2; transcript_support_level "NA"; ont "PGO:0000004"; tag "basic"; havana_gene "OTTMUSG00000046913.1"; havana_transcript "OTTMUST00000121617.1";
mm10-chrY	HAVANA	gene	85086652	85087347	.	-	.	gene_id "ENSMUSG00000100449.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28757"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046914.1";
mm10-chrY	HAVANA	transcript	85086652	85087347	.	-	.	gene_id "ENSMUSG00000100449.1"; transcript_id "ENSMUST00000186638.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28757"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28757-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046914.1"; havana_transcript "OTTMUST00000121618.1";
mm10-chrY	HAVANA	exon	85086652	85087347	.	-	.	gene_id "ENSMUSG00000100449.1"; transcript_id "ENSMUST00000186638.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28757"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28757-201"; exon_number 1; exon_id "ENSMUSE00001325103.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046914.1"; havana_transcript "OTTMUST00000121618.1";
mm10-chrY	HAVANA	gene	85168102	85168797	.	-	.	gene_id "ENSMUSG00000101990.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20856"; level 2; havana_gene "OTTMUSG00000046920.1";
mm10-chrY	HAVANA	transcript	85168102	85168797	.	-	.	gene_id "ENSMUSG00000101990.1"; transcript_id "ENSMUST00000186896.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20856"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20856-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046920.1"; havana_transcript "OTTMUST00000121634.1";
mm10-chrY	HAVANA	exon	85168102	85168797	.	-	.	gene_id "ENSMUSG00000101990.1"; transcript_id "ENSMUST00000186896.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20856"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20856-201"; exon_number 1; exon_id "ENSMUSE00001321982.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046920.1"; havana_transcript "OTTMUST00000121634.1";
mm10-chrY	HAVANA	gene	85185081	85186662	.	+	.	gene_id "ENSMUSG00000099642.1"; gene_type "lincRNA"; gene_name "Gm28348"; level 2; havana_gene "OTTMUSG00000046930.1";
mm10-chrY	HAVANA	transcript	85185081	85186662	.	+	.	gene_id "ENSMUSG00000099642.1"; transcript_id "ENSMUST00000187833.1"; gene_type "lincRNA"; gene_name "Gm28348"; transcript_type "lincRNA"; transcript_name "Gm28348-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046930.1"; havana_transcript "OTTMUST00000121646.1";
mm10-chrY	HAVANA	exon	85185081	85185316	.	+	.	gene_id "ENSMUSG00000099642.1"; transcript_id "ENSMUST00000187833.1"; gene_type "lincRNA"; gene_name "Gm28348"; transcript_type "lincRNA"; transcript_name "Gm28348-201"; exon_number 1; exon_id "ENSMUSE00001321763.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046930.1"; havana_transcript "OTTMUST00000121646.1";
mm10-chrY	HAVANA	exon	85186502	85186662	.	+	.	gene_id "ENSMUSG00000099642.1"; transcript_id "ENSMUST00000187833.1"; gene_type "lincRNA"; gene_name "Gm28348"; transcript_type "lincRNA"; transcript_name "Gm28348-201"; exon_number 2; exon_id "ENSMUSE00001321400.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046930.1"; havana_transcript "OTTMUST00000121646.1";
mm10-chrY	HAVANA	gene	85197785	85198397	.	-	.	gene_id "ENSMUSG00000101354.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28973"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046921.1";
mm10-chrY	HAVANA	transcript	85197785	85198397	.	-	.	gene_id "ENSMUSG00000101354.1"; transcript_id "ENSMUST00000189310.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28973"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28973-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046921.1"; havana_transcript "OTTMUST00000121635.1";
mm10-chrY	HAVANA	exon	85197785	85198397	.	-	.	gene_id "ENSMUSG00000101354.1"; transcript_id "ENSMUST00000189310.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28973"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28973-201"; exon_number 1; exon_id "ENSMUSE00001334607.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046921.1"; havana_transcript "OTTMUST00000121635.1";
mm10-chrY	HAVANA	gene	85234678	85235373	.	-	.	gene_id "ENSMUSG00000101835.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21734"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046922.1";
mm10-chrY	HAVANA	transcript	85234678	85235373	.	-	.	gene_id "ENSMUSG00000101835.1"; transcript_id "ENSMUST00000190346.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21734"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21734-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046922.1"; havana_transcript "OTTMUST00000121636.1";
mm10-chrY	HAVANA	exon	85234678	85235373	.	-	.	gene_id "ENSMUSG00000101835.1"; transcript_id "ENSMUST00000190346.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21734"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21734-201"; exon_number 1; exon_id "ENSMUSE00001330110.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046922.1"; havana_transcript "OTTMUST00000121636.1";
mm10-chrY	HAVANA	gene	85241278	85244624	.	-	.	gene_id "ENSMUSG00000102127.1"; gene_type "lincRNA"; gene_name "Gm28972"; level 2; havana_gene "OTTMUSG00000046923.1";
mm10-chrY	HAVANA	transcript	85241278	85244624	.	-	.	gene_id "ENSMUSG00000102127.1"; transcript_id "ENSMUST00000186990.1"; gene_type "lincRNA"; gene_name "Gm28972"; transcript_type "lincRNA"; transcript_name "Gm28972-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046923.1"; havana_transcript "OTTMUST00000121637.1";
mm10-chrY	HAVANA	exon	85244402	85244624	.	-	.	gene_id "ENSMUSG00000102127.1"; transcript_id "ENSMUST00000186990.1"; gene_type "lincRNA"; gene_name "Gm28972"; transcript_type "lincRNA"; transcript_name "Gm28972-201"; exon_number 1; exon_id "ENSMUSE00001323876.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046923.1"; havana_transcript "OTTMUST00000121637.1";
mm10-chrY	HAVANA	exon	85241278	85243221	.	-	.	gene_id "ENSMUSG00000102127.1"; transcript_id "ENSMUST00000186990.1"; gene_type "lincRNA"; gene_name "Gm28972"; transcript_type "lincRNA"; transcript_name "Gm28972-201"; exon_number 2; exon_id "ENSMUSE00001321234.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046923.1"; havana_transcript "OTTMUST00000121637.1";
mm10-chrY	HAVANA	gene	85270801	85273114	.	-	.	gene_id "ENSMUSG00000099362.1"; gene_type "lincRNA"; gene_name "Gm28970"; level 2; havana_gene "OTTMUSG00000046924.1";
mm10-chrY	HAVANA	transcript	85270801	85273114	.	-	.	gene_id "ENSMUSG00000099362.1"; transcript_id "ENSMUST00000191098.1"; gene_type "lincRNA"; gene_name "Gm28970"; transcript_type "lincRNA"; transcript_name "Gm28970-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046924.1"; havana_transcript "OTTMUST00000121638.1";
mm10-chrY	HAVANA	exon	85272891	85273114	.	-	.	gene_id "ENSMUSG00000099362.1"; transcript_id "ENSMUST00000191098.1"; gene_type "lincRNA"; gene_name "Gm28970"; transcript_type "lincRNA"; transcript_name "Gm28970-201"; exon_number 1; exon_id "ENSMUSE00001335556.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046924.1"; havana_transcript "OTTMUST00000121638.1";
mm10-chrY	HAVANA	exon	85270801	85271715	.	-	.	gene_id "ENSMUSG00000099362.1"; transcript_id "ENSMUST00000191098.1"; gene_type "lincRNA"; gene_name "Gm28970"; transcript_type "lincRNA"; transcript_name "Gm28970-201"; exon_number 2; exon_id "ENSMUSE00001321543.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046924.1"; havana_transcript "OTTMUST00000121638.1";
mm10-chrY	HAVANA	gene	85305105	85308342	.	+	.	gene_id "ENSMUSG00000099921.1"; gene_type "lincRNA"; gene_name "Gm28971"; level 2; havana_gene "OTTMUSG00000046925.1";
mm10-chrY	HAVANA	transcript	85305105	85308342	.	+	.	gene_id "ENSMUSG00000099921.1"; transcript_id "ENSMUST00000187506.1"; gene_type "lincRNA"; gene_name "Gm28971"; transcript_type "lincRNA"; transcript_name "Gm28971-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046925.1"; havana_transcript "OTTMUST00000121639.1";
mm10-chrY	HAVANA	exon	85305105	85305743	.	+	.	gene_id "ENSMUSG00000099921.1"; transcript_id "ENSMUST00000187506.1"; gene_type "lincRNA"; gene_name "Gm28971"; transcript_type "lincRNA"; transcript_name "Gm28971-201"; exon_number 1; exon_id "ENSMUSE00001322535.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046925.1"; havana_transcript "OTTMUST00000121639.1";
mm10-chrY	HAVANA	exon	85306229	85306414	.	+	.	gene_id "ENSMUSG00000099921.1"; transcript_id "ENSMUST00000187506.1"; gene_type "lincRNA"; gene_name "Gm28971"; transcript_type "lincRNA"; transcript_name "Gm28971-201"; exon_number 2; exon_id "ENSMUSE00001323749.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046925.1"; havana_transcript "OTTMUST00000121639.1";
mm10-chrY	HAVANA	exon	85307144	85307327	.	+	.	gene_id "ENSMUSG00000099921.1"; transcript_id "ENSMUST00000187506.1"; gene_type "lincRNA"; gene_name "Gm28971"; transcript_type "lincRNA"; transcript_name "Gm28971-201"; exon_number 3; exon_id "ENSMUSE00001331043.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046925.1"; havana_transcript "OTTMUST00000121639.1";
mm10-chrY	HAVANA	exon	85307854	85308342	.	+	.	gene_id "ENSMUSG00000099921.1"; transcript_id "ENSMUST00000187506.1"; gene_type "lincRNA"; gene_name "Gm28971"; transcript_type "lincRNA"; transcript_name "Gm28971-201"; exon_number 4; exon_id "ENSMUSE00001332719.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046925.1"; havana_transcript "OTTMUST00000121639.1";
mm10-chrY	HAVANA	transcript	85305558	85307918	.	+	.	gene_id "ENSMUSG00000099921.1"; transcript_id "ENSMUST00000189585.1"; gene_type "lincRNA"; gene_name "Gm28971"; transcript_type "lincRNA"; transcript_name "Gm28971-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046925.1"; havana_transcript "OTTMUST00000121640.1";
mm10-chrY	HAVANA	exon	85305558	85305743	.	+	.	gene_id "ENSMUSG00000099921.1"; transcript_id "ENSMUST00000189585.1"; gene_type "lincRNA"; gene_name "Gm28971"; transcript_type "lincRNA"; transcript_name "Gm28971-202"; exon_number 1; exon_id "ENSMUSE00001319376.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046925.1"; havana_transcript "OTTMUST00000121640.1";
mm10-chrY	HAVANA	exon	85306233	85306414	.	+	.	gene_id "ENSMUSG00000099921.1"; transcript_id "ENSMUST00000189585.1"; gene_type "lincRNA"; gene_name "Gm28971"; transcript_type "lincRNA"; transcript_name "Gm28971-202"; exon_number 2; exon_id "ENSMUSE00001323392.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046925.1"; havana_transcript "OTTMUST00000121640.1";
mm10-chrY	HAVANA	exon	85307854	85307918	.	+	.	gene_id "ENSMUSG00000099921.1"; transcript_id "ENSMUST00000189585.1"; gene_type "lincRNA"; gene_name "Gm28971"; transcript_type "lincRNA"; transcript_name "Gm28971-202"; exon_number 3; exon_id "ENSMUSE00001327763.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046925.1"; havana_transcript "OTTMUST00000121640.1";
mm10-chrY	ENSEMBL	gene	85414018	85414125	.	-	.	gene_id "ENSMUSG00000095705.1"; gene_type "rRNA"; gene_name "Gm24828"; level 3;
mm10-chrY	ENSEMBL	transcript	85414018	85414125	.	-	.	gene_id "ENSMUSG00000095705.1"; transcript_id "ENSMUST00000178507.1"; gene_type "rRNA"; gene_name "Gm24828"; transcript_type "rRNA"; transcript_name "Gm24828-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	85414018	85414125	.	-	.	gene_id "ENSMUSG00000095705.1"; transcript_id "ENSMUST00000178507.1"; gene_type "rRNA"; gene_name "Gm24828"; transcript_type "rRNA"; transcript_name "Gm24828-201"; exon_number 1; exon_id "ENSMUSE00001012959.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	85453821	85454516	.	-	.	gene_id "ENSMUSG00000100581.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21785"; level 2; havana_gene "OTTMUSG00000046931.1";
mm10-chrY	HAVANA	transcript	85453821	85454516	.	-	.	gene_id "ENSMUSG00000100581.1"; transcript_id "ENSMUST00000185440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21785"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21785-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046931.1"; havana_transcript "OTTMUST00000121647.1";
mm10-chrY	HAVANA	exon	85453821	85454516	.	-	.	gene_id "ENSMUSG00000100581.1"; transcript_id "ENSMUST00000185440.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21785"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21785-201"; exon_number 1; exon_id "ENSMUSE00001319341.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000046931.1"; havana_transcript "OTTMUST00000121647.1";
mm10-chrY	HAVANA	gene	85528517	85530908	.	-	.	gene_id "ENSMUSG00000095650.2"; gene_type "protein_coding"; gene_name "Gm20854"; level 2; havana_gene "OTTMUSG00000042966.1";
mm10-chrY	ENSEMBL	transcript	85528517	85529518	.	-	.	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000178889.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-201"; level 3; protein_id "ENSMUSP00000136905.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1";
mm10-chrY	ENSEMBL	exon	85528517	85529518	.	-	.	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000178889.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-201"; exon_number 1; exon_id "ENSMUSE00000986623.1"; level 3; protein_id "ENSMUSP00000136905.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1";
mm10-chrY	ENSEMBL	CDS	85528663	85529343	.	-	0	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000178889.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-201"; exon_number 1; exon_id "ENSMUSE00000986623.1"; level 3; protein_id "ENSMUSP00000136905.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1";
mm10-chrY	ENSEMBL	start_codon	85529341	85529343	.	-	0	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000178889.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-201"; exon_number 1; exon_id "ENSMUSE00000986623.1"; level 3; protein_id "ENSMUSP00000136905.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1";
mm10-chrY	ENSEMBL	stop_codon	85528660	85528662	.	-	0	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000178889.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-201"; exon_number 1; exon_id "ENSMUSE00000986623.1"; level 3; protein_id "ENSMUSP00000136905.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1";
mm10-chrY	ENSEMBL	UTR	85528517	85528662	.	-	.	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000178889.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-201"; exon_number 1; exon_id "ENSMUSE00000986623.1"; level 3; protein_id "ENSMUSP00000136905.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1";
mm10-chrY	ENSEMBL	UTR	85529344	85529518	.	-	.	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000178889.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-201"; exon_number 1; exon_id "ENSMUSE00000986623.1"; level 3; protein_id "ENSMUSP00000136905.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1";
mm10-chrY	HAVANA	transcript	85528523	85530908	.	-	.	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000181549.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-202"; level 2; protein_id "ENSMUSP00000138074.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1"; havana_transcript "OTTMUST00000112802.1";
mm10-chrY	HAVANA	exon	85530855	85530908	.	-	.	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000181549.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-202"; exon_number 1; exon_id "ENSMUSE00001136702.1"; level 2; protein_id "ENSMUSP00000138074.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1"; havana_transcript "OTTMUST00000112802.1";
mm10-chrY	HAVANA	exon	85528523	85529624	.	-	.	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000181549.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-202"; exon_number 2; exon_id "ENSMUSE00001165109.1"; level 2; protein_id "ENSMUSP00000138074.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1"; havana_transcript "OTTMUST00000112802.1";
mm10-chrY	HAVANA	CDS	85528663	85529343	.	-	0	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000181549.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-202"; exon_number 2; exon_id "ENSMUSE00001165109.1"; level 2; protein_id "ENSMUSP00000138074.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1"; havana_transcript "OTTMUST00000112802.1";
mm10-chrY	HAVANA	start_codon	85529341	85529343	.	-	0	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000181549.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-202"; exon_number 2; exon_id "ENSMUSE00001165109.1"; level 2; protein_id "ENSMUSP00000138074.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1"; havana_transcript "OTTMUST00000112802.1";
mm10-chrY	HAVANA	stop_codon	85528660	85528662	.	-	0	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000181549.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-202"; exon_number 2; exon_id "ENSMUSE00001165109.1"; level 2; protein_id "ENSMUSP00000138074.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1"; havana_transcript "OTTMUST00000112802.1";
mm10-chrY	HAVANA	UTR	85530855	85530908	.	-	.	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000181549.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-202"; exon_number 1; exon_id "ENSMUSE00001136702.1"; level 2; protein_id "ENSMUSP00000138074.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1"; havana_transcript "OTTMUST00000112802.1";
mm10-chrY	HAVANA	UTR	85528523	85528662	.	-	.	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000181549.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-202"; exon_number 2; exon_id "ENSMUSE00001165109.1"; level 2; protein_id "ENSMUSP00000138074.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1"; havana_transcript "OTTMUST00000112802.1";
mm10-chrY	HAVANA	UTR	85529344	85529624	.	-	.	gene_id "ENSMUSG00000095650.2"; transcript_id "ENSMUST00000181549.1"; gene_type "protein_coding"; gene_name "Gm20854"; transcript_type "protein_coding"; transcript_name "Gm20854-202"; exon_number 2; exon_id "ENSMUSE00001165109.1"; level 2; protein_id "ENSMUSP00000138074.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; tag "CCDS"; ccdsid "CCDS85913.1"; havana_gene "OTTMUSG00000042966.1"; havana_transcript "OTTMUST00000112802.1";
mm10-chrY	HAVANA	gene	85558312	85558926	.	-	.	gene_id "ENSMUSG00000099477.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28349"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046932.1";
mm10-chrY	HAVANA	transcript	85558312	85558926	.	-	.	gene_id "ENSMUSG00000099477.1"; transcript_id "ENSMUST00000188590.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28349"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28349-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046932.1"; havana_transcript "OTTMUST00000121648.1";
mm10-chrY	HAVANA	exon	85558312	85558926	.	-	.	gene_id "ENSMUSG00000099477.1"; transcript_id "ENSMUST00000188590.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28349"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28349-201"; exon_number 1; exon_id "ENSMUSE00001329856.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046932.1"; havana_transcript "OTTMUST00000121648.1";
mm10-chrY	HAVANA	gene	85595215	85595910	.	-	.	gene_id "ENSMUSG00000102092.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21892"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000046933.1";
mm10-chrY	HAVANA	transcript	85595215	85595910	.	-	.	gene_id "ENSMUSG00000102092.1"; transcript_id "ENSMUST00000189182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21892"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21892-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046933.1"; havana_transcript "OTTMUST00000121649.1";
mm10-chrY	HAVANA	exon	85595215	85595910	.	-	.	gene_id "ENSMUSG00000102092.1"; transcript_id "ENSMUST00000189182.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21892"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21892-201"; exon_number 1; exon_id "ENSMUSE00001329699.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000046933.1"; havana_transcript "OTTMUST00000121649.1";
mm10-chrY	HAVANA	gene	85601810	85605156	.	-	.	gene_id "ENSMUSG00000101989.1"; gene_type "lincRNA"; gene_name "Gm28346"; level 2; havana_gene "OTTMUSG00000046934.1";
mm10-chrY	HAVANA	transcript	85601810	85605156	.	-	.	gene_id "ENSMUSG00000101989.1"; transcript_id "ENSMUST00000189021.1"; gene_type "lincRNA"; gene_name "Gm28346"; transcript_type "lincRNA"; transcript_name "Gm28346-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046934.1"; havana_transcript "OTTMUST00000121650.1";
mm10-chrY	HAVANA	exon	85604934	85605156	.	-	.	gene_id "ENSMUSG00000101989.1"; transcript_id "ENSMUST00000189021.1"; gene_type "lincRNA"; gene_name "Gm28346"; transcript_type "lincRNA"; transcript_name "Gm28346-201"; exon_number 1; exon_id "ENSMUSE00001332930.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046934.1"; havana_transcript "OTTMUST00000121650.1";
mm10-chrY	HAVANA	exon	85601810	85603753	.	-	.	gene_id "ENSMUSG00000101989.1"; transcript_id "ENSMUST00000189021.1"; gene_type "lincRNA"; gene_name "Gm28346"; transcript_type "lincRNA"; transcript_name "Gm28346-201"; exon_number 2; exon_id "ENSMUSE00001320826.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000046934.1"; havana_transcript "OTTMUST00000121650.1";
mm10-chrY	HAVANA	gene	85631293	85633606	.	-	.	gene_id "ENSMUSG00000100288.1"; gene_type "lincRNA"; gene_name "Gm28345"; level 2; havana_gene "OTTMUSG00000046935.1";
mm10-chrY	HAVANA	transcript	85631293	85633606	.	-	.	gene_id "ENSMUSG00000100288.1"; transcript_id "ENSMUST00000188769.1"; gene_type "lincRNA"; gene_name "Gm28345"; transcript_type "lincRNA"; transcript_name "Gm28345-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046935.1"; havana_transcript "OTTMUST00000121651.1";
mm10-chrY	HAVANA	exon	85633383	85633606	.	-	.	gene_id "ENSMUSG00000100288.1"; transcript_id "ENSMUST00000188769.1"; gene_type "lincRNA"; gene_name "Gm28345"; transcript_type "lincRNA"; transcript_name "Gm28345-201"; exon_number 1; exon_id "ENSMUSE00001320434.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046935.1"; havana_transcript "OTTMUST00000121651.1";
mm10-chrY	HAVANA	exon	85631293	85632207	.	-	.	gene_id "ENSMUSG00000100288.1"; transcript_id "ENSMUST00000188769.1"; gene_type "lincRNA"; gene_name "Gm28345"; transcript_type "lincRNA"; transcript_name "Gm28345-201"; exon_number 2; exon_id "ENSMUSE00001318048.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046935.1"; havana_transcript "OTTMUST00000121651.1";
mm10-chrY	HAVANA	gene	85661766	85672245	.	-	.	gene_id "ENSMUSG00000099341.1"; gene_type "lincRNA"; gene_name "Gm29090"; level 2; havana_gene "OTTMUSG00000047024.1";
mm10-chrY	HAVANA	transcript	85661766	85672245	.	-	.	gene_id "ENSMUSG00000099341.1"; transcript_id "ENSMUST00000188526.1"; gene_type "lincRNA"; gene_name "Gm29090"; transcript_type "lincRNA"; transcript_name "Gm29090-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047024.1"; havana_transcript "OTTMUST00000121797.1";
mm10-chrY	HAVANA	exon	85672186	85672245	.	-	.	gene_id "ENSMUSG00000099341.1"; transcript_id "ENSMUST00000188526.1"; gene_type "lincRNA"; gene_name "Gm29090"; transcript_type "lincRNA"; transcript_name "Gm29090-201"; exon_number 1; exon_id "ENSMUSE00001320048.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047024.1"; havana_transcript "OTTMUST00000121797.1";
mm10-chrY	HAVANA	exon	85668457	85668598	.	-	.	gene_id "ENSMUSG00000099341.1"; transcript_id "ENSMUST00000188526.1"; gene_type "lincRNA"; gene_name "Gm29090"; transcript_type "lincRNA"; transcript_name "Gm29090-201"; exon_number 2; exon_id "ENSMUSE00001335159.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047024.1"; havana_transcript "OTTMUST00000121797.1";
mm10-chrY	HAVANA	exon	85663326	85663417	.	-	.	gene_id "ENSMUSG00000099341.1"; transcript_id "ENSMUST00000188526.1"; gene_type "lincRNA"; gene_name "Gm29090"; transcript_type "lincRNA"; transcript_name "Gm29090-201"; exon_number 3; exon_id "ENSMUSE00001327079.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047024.1"; havana_transcript "OTTMUST00000121797.1";
mm10-chrY	HAVANA	exon	85661766	85661928	.	-	.	gene_id "ENSMUSG00000099341.1"; transcript_id "ENSMUST00000188526.1"; gene_type "lincRNA"; gene_name "Gm29090"; transcript_type "lincRNA"; transcript_name "Gm29090-201"; exon_number 4; exon_id "ENSMUSE00001328454.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047024.1"; havana_transcript "OTTMUST00000121797.1";
mm10-chrY	HAVANA	gene	85665589	85668826	.	+	.	gene_id "ENSMUSG00000101282.1"; gene_type "lincRNA"; gene_name "Gm28152"; level 2; havana_gene "OTTMUSG00000046936.1";
mm10-chrY	HAVANA	transcript	85665589	85668826	.	+	.	gene_id "ENSMUSG00000101282.1"; transcript_id "ENSMUST00000188694.1"; gene_type "lincRNA"; gene_name "Gm28152"; transcript_type "lincRNA"; transcript_name "Gm28152-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046936.1"; havana_transcript "OTTMUST00000121652.1";
mm10-chrY	HAVANA	exon	85665589	85666227	.	+	.	gene_id "ENSMUSG00000101282.1"; transcript_id "ENSMUST00000188694.1"; gene_type "lincRNA"; gene_name "Gm28152"; transcript_type "lincRNA"; transcript_name "Gm28152-201"; exon_number 1; exon_id "ENSMUSE00001324464.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046936.1"; havana_transcript "OTTMUST00000121652.1";
mm10-chrY	HAVANA	exon	85666713	85666898	.	+	.	gene_id "ENSMUSG00000101282.1"; transcript_id "ENSMUST00000188694.1"; gene_type "lincRNA"; gene_name "Gm28152"; transcript_type "lincRNA"; transcript_name "Gm28152-201"; exon_number 2; exon_id "ENSMUSE00001323969.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046936.1"; havana_transcript "OTTMUST00000121652.1";
mm10-chrY	HAVANA	exon	85667628	85667811	.	+	.	gene_id "ENSMUSG00000101282.1"; transcript_id "ENSMUST00000188694.1"; gene_type "lincRNA"; gene_name "Gm28152"; transcript_type "lincRNA"; transcript_name "Gm28152-201"; exon_number 3; exon_id "ENSMUSE00001331134.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046936.1"; havana_transcript "OTTMUST00000121652.1";
mm10-chrY	HAVANA	exon	85668338	85668826	.	+	.	gene_id "ENSMUSG00000101282.1"; transcript_id "ENSMUST00000188694.1"; gene_type "lincRNA"; gene_name "Gm28152"; transcript_type "lincRNA"; transcript_name "Gm28152-201"; exon_number 4; exon_id "ENSMUSE00001318495.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000046936.1"; havana_transcript "OTTMUST00000121652.1";
mm10-chrY	HAVANA	transcript	85666042	85668402	.	+	.	gene_id "ENSMUSG00000101282.1"; transcript_id "ENSMUST00000191177.1"; gene_type "lincRNA"; gene_name "Gm28152"; transcript_type "lincRNA"; transcript_name "Gm28152-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046936.1"; havana_transcript "OTTMUST00000121653.1";
mm10-chrY	HAVANA	exon	85666042	85666227	.	+	.	gene_id "ENSMUSG00000101282.1"; transcript_id "ENSMUST00000191177.1"; gene_type "lincRNA"; gene_name "Gm28152"; transcript_type "lincRNA"; transcript_name "Gm28152-202"; exon_number 1; exon_id "ENSMUSE00001320703.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046936.1"; havana_transcript "OTTMUST00000121653.1";
mm10-chrY	HAVANA	exon	85666717	85666898	.	+	.	gene_id "ENSMUSG00000101282.1"; transcript_id "ENSMUST00000191177.1"; gene_type "lincRNA"; gene_name "Gm28152"; transcript_type "lincRNA"; transcript_name "Gm28152-202"; exon_number 2; exon_id "ENSMUSE00001319263.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046936.1"; havana_transcript "OTTMUST00000121653.1";
mm10-chrY	HAVANA	exon	85668338	85668402	.	+	.	gene_id "ENSMUSG00000101282.1"; transcript_id "ENSMUST00000191177.1"; gene_type "lincRNA"; gene_name "Gm28152"; transcript_type "lincRNA"; transcript_name "Gm28152-202"; exon_number 3; exon_id "ENSMUSE00001335255.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000046936.1"; havana_transcript "OTTMUST00000121653.1";
mm10-chrY	ENSEMBL	gene	85774442	85774549	.	-	.	gene_id "ENSMUSG00000094937.1"; gene_type "rRNA"; gene_name "Gm23770"; level 3;
mm10-chrY	ENSEMBL	transcript	85774442	85774549	.	-	.	gene_id "ENSMUSG00000094937.1"; transcript_id "ENSMUST00000178009.1"; gene_type "rRNA"; gene_name "Gm23770"; transcript_type "rRNA"; transcript_name "Gm23770-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	85774442	85774549	.	-	.	gene_id "ENSMUSG00000094937.1"; transcript_id "ENSMUST00000178009.1"; gene_type "rRNA"; gene_name "Gm23770"; transcript_type "rRNA"; transcript_name "Gm23770-201"; exon_number 1; exon_id "ENSMUSE00001053706.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	85814214	85814909	.	-	.	gene_id "ENSMUSG00000101221.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21881"; level 2; havana_gene "OTTMUSG00000047025.1";
mm10-chrY	HAVANA	transcript	85814214	85814909	.	-	.	gene_id "ENSMUSG00000101221.1"; transcript_id "ENSMUST00000188591.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21881"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21881-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047025.1"; havana_transcript "OTTMUST00000121798.1";
mm10-chrY	HAVANA	exon	85814214	85814909	.	-	.	gene_id "ENSMUSG00000101221.1"; transcript_id "ENSMUST00000188591.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21881"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21881-201"; exon_number 1; exon_id "ENSMUSE00001326493.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047025.1"; havana_transcript "OTTMUST00000121798.1";
mm10-chrY	HAVANA	gene	85888950	85889645	.	-	.	gene_id "ENSMUSG00000099992.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21435"; level 2; havana_gene "OTTMUSG00000047026.1";
mm10-chrY	HAVANA	transcript	85888950	85889645	.	-	.	gene_id "ENSMUSG00000099992.1"; transcript_id "ENSMUST00000187508.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21435"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21435-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047026.1"; havana_transcript "OTTMUST00000121799.1";
mm10-chrY	HAVANA	exon	85888950	85889645	.	-	.	gene_id "ENSMUSG00000099992.1"; transcript_id "ENSMUST00000187508.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21435"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21435-201"; exon_number 1; exon_id "ENSMUSE00001327683.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047026.1"; havana_transcript "OTTMUST00000121799.1";
mm10-chrY	HAVANA	gene	85918649	85919263	.	-	.	gene_id "ENSMUSG00000101346.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29505"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047027.1";
mm10-chrY	HAVANA	transcript	85918649	85919263	.	-	.	gene_id "ENSMUSG00000101346.1"; transcript_id "ENSMUST00000188424.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29505"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29505-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047027.1"; havana_transcript "OTTMUST00000121800.1";
mm10-chrY	HAVANA	exon	85918649	85919263	.	-	.	gene_id "ENSMUSG00000101346.1"; transcript_id "ENSMUST00000188424.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29505"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29505-201"; exon_number 1; exon_id "ENSMUSE00001328279.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047027.1"; havana_transcript "OTTMUST00000121800.1";
mm10-chrY	HAVANA	gene	85955552	85956247	.	-	.	gene_id "ENSMUSG00000101230.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21862"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047028.1";
mm10-chrY	HAVANA	transcript	85955552	85956247	.	-	.	gene_id "ENSMUSG00000101230.1"; transcript_id "ENSMUST00000186957.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21862"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21862-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047028.1"; havana_transcript "OTTMUST00000121801.1";
mm10-chrY	HAVANA	exon	85955552	85956247	.	-	.	gene_id "ENSMUSG00000101230.1"; transcript_id "ENSMUST00000186957.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21862"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21862-201"; exon_number 1; exon_id "ENSMUSE00001324439.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047028.1"; havana_transcript "OTTMUST00000121801.1";
mm10-chrY	HAVANA	gene	85962134	85965480	.	-	.	gene_id "ENSMUSG00000102061.1"; gene_type "lincRNA"; gene_name "Gm28823"; level 2; havana_gene "OTTMUSG00000047029.1";
mm10-chrY	HAVANA	transcript	85962134	85965480	.	-	.	gene_id "ENSMUSG00000102061.1"; transcript_id "ENSMUST00000188540.1"; gene_type "lincRNA"; gene_name "Gm28823"; transcript_type "lincRNA"; transcript_name "Gm28823-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047029.1"; havana_transcript "OTTMUST00000121802.1";
mm10-chrY	HAVANA	exon	85965258	85965480	.	-	.	gene_id "ENSMUSG00000102061.1"; transcript_id "ENSMUST00000188540.1"; gene_type "lincRNA"; gene_name "Gm28823"; transcript_type "lincRNA"; transcript_name "Gm28823-201"; exon_number 1; exon_id "ENSMUSE00001331844.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047029.1"; havana_transcript "OTTMUST00000121802.1";
mm10-chrY	HAVANA	exon	85962134	85964077	.	-	.	gene_id "ENSMUSG00000102061.1"; transcript_id "ENSMUST00000188540.1"; gene_type "lincRNA"; gene_name "Gm28823"; transcript_type "lincRNA"; transcript_name "Gm28823-201"; exon_number 2; exon_id "ENSMUSE00001319084.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047029.1"; havana_transcript "OTTMUST00000121802.1";
mm10-chrY	HAVANA	gene	85999759	86002999	.	+	.	gene_id "ENSMUSG00000101961.1"; gene_type "lincRNA"; gene_name "Gm28220"; level 2; havana_gene "OTTMUSG00000047030.1";
mm10-chrY	HAVANA	transcript	85999759	86002999	.	+	.	gene_id "ENSMUSG00000101961.1"; transcript_id "ENSMUST00000189607.1"; gene_type "lincRNA"; gene_name "Gm28220"; transcript_type "lincRNA"; transcript_name "Gm28220-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047030.1"; havana_transcript "OTTMUST00000121803.1";
mm10-chrY	HAVANA	exon	85999759	86000399	.	+	.	gene_id "ENSMUSG00000101961.1"; transcript_id "ENSMUST00000189607.1"; gene_type "lincRNA"; gene_name "Gm28220"; transcript_type "lincRNA"; transcript_name "Gm28220-201"; exon_number 1; exon_id "ENSMUSE00001327888.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047030.1"; havana_transcript "OTTMUST00000121803.1";
mm10-chrY	HAVANA	exon	86000885	86001070	.	+	.	gene_id "ENSMUSG00000101961.1"; transcript_id "ENSMUST00000189607.1"; gene_type "lincRNA"; gene_name "Gm28220"; transcript_type "lincRNA"; transcript_name "Gm28220-201"; exon_number 2; exon_id "ENSMUSE00001328447.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047030.1"; havana_transcript "OTTMUST00000121803.1";
mm10-chrY	HAVANA	exon	86001801	86001984	.	+	.	gene_id "ENSMUSG00000101961.1"; transcript_id "ENSMUST00000189607.1"; gene_type "lincRNA"; gene_name "Gm28220"; transcript_type "lincRNA"; transcript_name "Gm28220-201"; exon_number 3; exon_id "ENSMUSE00001321605.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047030.1"; havana_transcript "OTTMUST00000121803.1";
mm10-chrY	HAVANA	exon	86002511	86002999	.	+	.	gene_id "ENSMUSG00000101961.1"; transcript_id "ENSMUST00000189607.1"; gene_type "lincRNA"; gene_name "Gm28220"; transcript_type "lincRNA"; transcript_name "Gm28220-201"; exon_number 4; exon_id "ENSMUSE00001320159.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047030.1"; havana_transcript "OTTMUST00000121803.1";
mm10-chrY	HAVANA	transcript	86000211	86002579	.	+	.	gene_id "ENSMUSG00000101961.1"; transcript_id "ENSMUST00000190253.1"; gene_type "lincRNA"; gene_name "Gm28220"; transcript_type "lincRNA"; transcript_name "Gm28220-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047030.1"; havana_transcript "OTTMUST00000121804.1";
mm10-chrY	HAVANA	exon	86000211	86000399	.	+	.	gene_id "ENSMUSG00000101961.1"; transcript_id "ENSMUST00000190253.1"; gene_type "lincRNA"; gene_name "Gm28220"; transcript_type "lincRNA"; transcript_name "Gm28220-202"; exon_number 1; exon_id "ENSMUSE00001331838.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047030.1"; havana_transcript "OTTMUST00000121804.1";
mm10-chrY	HAVANA	exon	86000889	86001070	.	+	.	gene_id "ENSMUSG00000101961.1"; transcript_id "ENSMUST00000190253.1"; gene_type "lincRNA"; gene_name "Gm28220"; transcript_type "lincRNA"; transcript_name "Gm28220-202"; exon_number 2; exon_id "ENSMUSE00001319632.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047030.1"; havana_transcript "OTTMUST00000121804.1";
mm10-chrY	HAVANA	exon	86002511	86002579	.	+	.	gene_id "ENSMUSG00000101961.1"; transcript_id "ENSMUST00000190253.1"; gene_type "lincRNA"; gene_name "Gm28220"; transcript_type "lincRNA"; transcript_name "Gm28220-202"; exon_number 3; exon_id "ENSMUSE00001321180.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047030.1"; havana_transcript "OTTMUST00000121804.1";
mm10-chrY	HAVANA	gene	86061772	86087952	.	+	.	gene_id "ENSMUSG00000100240.1"; gene_type "protein_coding"; gene_name "Gm20820"; level 2; havana_gene "OTTMUSG00000047031.1";
mm10-chrY	HAVANA	transcript	86061772	86087952	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	exon	86061772	86061815	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 1; exon_id "ENSMUSE00001319243.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	exon	86063180	86063311	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 2; exon_id "ENSMUSE00001326380.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	CDS	86063194	86063311	.	+	0	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 2; exon_id "ENSMUSE00001326380.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	start_codon	86063194	86063196	.	+	0	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 2; exon_id "ENSMUSE00001326380.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	exon	86068646	86068712	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 3; exon_id "ENSMUSE00001320291.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	CDS	86068646	86068712	.	+	2	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 3; exon_id "ENSMUSE00001320291.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	exon	86069345	86069379	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 4; exon_id "ENSMUSE00001329469.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	CDS	86069345	86069379	.	+	1	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 4; exon_id "ENSMUSE00001329469.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	exon	86076387	86076453	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 5; exon_id "ENSMUSE00001333738.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	CDS	86076387	86076453	.	+	2	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 5; exon_id "ENSMUSE00001333738.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	exon	86077033	86077067	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 6; exon_id "ENSMUSE00001332306.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	CDS	86077033	86077067	.	+	1	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 6; exon_id "ENSMUSE00001332306.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	exon	86084249	86084366	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 7; exon_id "ENSMUSE00001325043.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	CDS	86084249	86084366	.	+	2	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 7; exon_id "ENSMUSE00001325043.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	exon	86085130	86085229	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 8; exon_id "ENSMUSE00001325354.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	CDS	86085130	86085229	.	+	1	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 8; exon_id "ENSMUSE00001325354.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	exon	86087271	86087369	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 9; exon_id "ENSMUSE00001324242.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	CDS	86087271	86087369	.	+	0	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 9; exon_id "ENSMUSE00001324242.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	exon	86087729	86087952	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 10; exon_id "ENSMUSE00001327457.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	CDS	86087729	86087755	.	+	0	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 10; exon_id "ENSMUSE00001327457.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	stop_codon	86087756	86087758	.	+	0	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 10; exon_id "ENSMUSE00001327457.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	UTR	86061772	86061815	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 1; exon_id "ENSMUSE00001319243.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	UTR	86063180	86063193	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 2; exon_id "ENSMUSE00001326380.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	UTR	86087756	86087952	.	+	.	gene_id "ENSMUSG00000100240.1"; transcript_id "ENSMUST00000188754.1"; gene_type "protein_coding"; gene_name "Gm20820"; transcript_type "protein_coding"; transcript_name "Gm20820-201"; exon_number 10; exon_id "ENSMUSE00001327457.1"; level 2; protein_id "ENSMUSP00000139858.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047031.1"; havana_transcript "OTTMUST00000121805.1";
mm10-chrY	HAVANA	gene	86148112	86148807	.	-	.	gene_id "ENSMUSG00000101347.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28219"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047032.1";
mm10-chrY	HAVANA	transcript	86148112	86148807	.	-	.	gene_id "ENSMUSG00000101347.1"; transcript_id "ENSMUST00000185452.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28219"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28219-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047032.1"; havana_transcript "OTTMUST00000121806.1";
mm10-chrY	HAVANA	exon	86148112	86148807	.	-	.	gene_id "ENSMUSG00000101347.1"; transcript_id "ENSMUST00000185452.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28219"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28219-201"; exon_number 1; exon_id "ENSMUSE00001329177.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047032.1"; havana_transcript "OTTMUST00000121806.1";
mm10-chrY	HAVANA	gene	86219344	86222581	.	+	.	gene_id "ENSMUSG00000099824.1"; gene_type "lincRNA"; gene_name "Gm28218"; level 2; havana_gene "OTTMUSG00000047033.1";
mm10-chrY	HAVANA	transcript	86219344	86222581	.	+	.	gene_id "ENSMUSG00000099824.1"; transcript_id "ENSMUST00000186782.1"; gene_type "lincRNA"; gene_name "Gm28218"; transcript_type "lincRNA"; transcript_name "Gm28218-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047033.1"; havana_transcript "OTTMUST00000121807.1";
mm10-chrY	HAVANA	exon	86219344	86219981	.	+	.	gene_id "ENSMUSG00000099824.1"; transcript_id "ENSMUST00000186782.1"; gene_type "lincRNA"; gene_name "Gm28218"; transcript_type "lincRNA"; transcript_name "Gm28218-202"; exon_number 1; exon_id "ENSMUSE00001319744.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047033.1"; havana_transcript "OTTMUST00000121807.1";
mm10-chrY	HAVANA	exon	86220467	86220652	.	+	.	gene_id "ENSMUSG00000099824.1"; transcript_id "ENSMUST00000186782.1"; gene_type "lincRNA"; gene_name "Gm28218"; transcript_type "lincRNA"; transcript_name "Gm28218-202"; exon_number 2; exon_id "ENSMUSE00001334723.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047033.1"; havana_transcript "OTTMUST00000121807.1";
mm10-chrY	HAVANA	exon	86221382	86221565	.	+	.	gene_id "ENSMUSG00000099824.1"; transcript_id "ENSMUST00000186782.1"; gene_type "lincRNA"; gene_name "Gm28218"; transcript_type "lincRNA"; transcript_name "Gm28218-202"; exon_number 3; exon_id "ENSMUSE00001329298.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047033.1"; havana_transcript "OTTMUST00000121807.1";
mm10-chrY	HAVANA	exon	86222092	86222581	.	+	.	gene_id "ENSMUSG00000099824.1"; transcript_id "ENSMUST00000186782.1"; gene_type "lincRNA"; gene_name "Gm28218"; transcript_type "lincRNA"; transcript_name "Gm28218-202"; exon_number 4; exon_id "ENSMUSE00001333177.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047033.1"; havana_transcript "OTTMUST00000121807.1";
mm10-chrY	HAVANA	transcript	86219796	86222156	.	+	.	gene_id "ENSMUSG00000099824.1"; transcript_id "ENSMUST00000185320.1"; gene_type "lincRNA"; gene_name "Gm28218"; transcript_type "lincRNA"; transcript_name "Gm28218-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047033.1"; havana_transcript "OTTMUST00000121808.1";
mm10-chrY	HAVANA	exon	86219796	86219981	.	+	.	gene_id "ENSMUSG00000099824.1"; transcript_id "ENSMUST00000185320.1"; gene_type "lincRNA"; gene_name "Gm28218"; transcript_type "lincRNA"; transcript_name "Gm28218-201"; exon_number 1; exon_id "ENSMUSE00001320471.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047033.1"; havana_transcript "OTTMUST00000121808.1";
mm10-chrY	HAVANA	exon	86220471	86220652	.	+	.	gene_id "ENSMUSG00000099824.1"; transcript_id "ENSMUST00000185320.1"; gene_type "lincRNA"; gene_name "Gm28218"; transcript_type "lincRNA"; transcript_name "Gm28218-201"; exon_number 2; exon_id "ENSMUSE00001334825.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047033.1"; havana_transcript "OTTMUST00000121808.1";
mm10-chrY	HAVANA	exon	86222092	86222156	.	+	.	gene_id "ENSMUSG00000099824.1"; transcript_id "ENSMUST00000185320.1"; gene_type "lincRNA"; gene_name "Gm28218"; transcript_type "lincRNA"; transcript_name "Gm28218-201"; exon_number 3; exon_id "ENSMUSE00001331974.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047033.1"; havana_transcript "OTTMUST00000121808.1";
mm10-chrY	ENSEMBL	gene	86326017	86326124	.	-	.	gene_id "ENSMUSG00000093928.1"; gene_type "rRNA"; gene_name "Gm23863"; level 3;
mm10-chrY	ENSEMBL	transcript	86326017	86326124	.	-	.	gene_id "ENSMUSG00000093928.1"; transcript_id "ENSMUST00000178265.1"; gene_type "rRNA"; gene_name "Gm23863"; transcript_type "rRNA"; transcript_name "Gm23863-201"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	ENSEMBL	exon	86326017	86326124	.	-	.	gene_id "ENSMUSG00000093928.1"; transcript_id "ENSMUST00000178265.1"; gene_type "rRNA"; gene_name "Gm23863"; transcript_type "rRNA"; transcript_name "Gm23863-201"; exon_number 1; exon_id "ENSMUSE00001027431.1"; level 3; transcript_support_level "NA"; tag "basic";
mm10-chrY	HAVANA	gene	86365731	86366423	.	-	.	gene_id "ENSMUSG00000100116.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20861"; level 2; havana_gene "OTTMUSG00000047034.1";
mm10-chrY	HAVANA	transcript	86365731	86366423	.	-	.	gene_id "ENSMUSG00000100116.1"; transcript_id "ENSMUST00000186824.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20861"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20861-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047034.1"; havana_transcript "OTTMUST00000121809.1";
mm10-chrY	HAVANA	exon	86365731	86366423	.	-	.	gene_id "ENSMUSG00000100116.1"; transcript_id "ENSMUST00000186824.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20861"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20861-201"; exon_number 1; exon_id "ENSMUSE00001324290.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047034.1"; havana_transcript "OTTMUST00000121809.1";
mm10-chrY	HAVANA	gene	86434199	86434894	.	-	.	gene_id "ENSMUSG00000099524.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20860"; level 2; havana_gene "OTTMUSG00000047068.1";
mm10-chrY	HAVANA	transcript	86434199	86434894	.	-	.	gene_id "ENSMUSG00000099524.1"; transcript_id "ENSMUST00000190842.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20860"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20860-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047068.1"; havana_transcript "OTTMUST00000121858.1";
mm10-chrY	HAVANA	exon	86434199	86434894	.	-	.	gene_id "ENSMUSG00000099524.1"; transcript_id "ENSMUST00000190842.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20860"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20860-201"; exon_number 1; exon_id "ENSMUSE00001334790.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047068.1"; havana_transcript "OTTMUST00000121858.1";
mm10-chrY	HAVANA	gene	86462812	86463426	.	-	.	gene_id "ENSMUSG00000100854.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28057"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047069.1";
mm10-chrY	HAVANA	transcript	86462812	86463426	.	-	.	gene_id "ENSMUSG00000100854.1"; transcript_id "ENSMUST00000186603.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28057"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28057-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047069.1"; havana_transcript "OTTMUST00000121859.1";
mm10-chrY	HAVANA	exon	86462812	86463426	.	-	.	gene_id "ENSMUSG00000100854.1"; transcript_id "ENSMUST00000186603.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28057"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28057-201"; exon_number 1; exon_id "ENSMUSE00001332624.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047069.1"; havana_transcript "OTTMUST00000121859.1";
mm10-chrY	HAVANA	gene	86499617	86500312	.	-	.	gene_id "ENSMUSG00000101092.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21796"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047070.1";
mm10-chrY	HAVANA	transcript	86499617	86500312	.	-	.	gene_id "ENSMUSG00000101092.1"; transcript_id "ENSMUST00000187116.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21796-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047070.1"; havana_transcript "OTTMUST00000121860.1";
mm10-chrY	HAVANA	exon	86499617	86500312	.	-	.	gene_id "ENSMUSG00000101092.1"; transcript_id "ENSMUST00000187116.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21796"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21796-201"; exon_number 1; exon_id "ENSMUSE00001320746.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047070.1"; havana_transcript "OTTMUST00000121860.1";
mm10-chrY	HAVANA	gene	86506173	86509519	.	-	.	gene_id "ENSMUSG00000100817.1"; gene_type "lincRNA"; gene_name "Gm29302"; level 2; havana_gene "OTTMUSG00000047071.1";
mm10-chrY	HAVANA	transcript	86506173	86509519	.	-	.	gene_id "ENSMUSG00000100817.1"; transcript_id "ENSMUST00000187209.1"; gene_type "lincRNA"; gene_name "Gm29302"; transcript_type "lincRNA"; transcript_name "Gm29302-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047071.1"; havana_transcript "OTTMUST00000121861.1";
mm10-chrY	HAVANA	exon	86509297	86509519	.	-	.	gene_id "ENSMUSG00000100817.1"; transcript_id "ENSMUST00000187209.1"; gene_type "lincRNA"; gene_name "Gm29302"; transcript_type "lincRNA"; transcript_name "Gm29302-201"; exon_number 1; exon_id "ENSMUSE00001331400.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047071.1"; havana_transcript "OTTMUST00000121861.1";
mm10-chrY	HAVANA	exon	86506173	86508116	.	-	.	gene_id "ENSMUSG00000100817.1"; transcript_id "ENSMUST00000187209.1"; gene_type "lincRNA"; gene_name "Gm29302"; transcript_type "lincRNA"; transcript_name "Gm29302-201"; exon_number 2; exon_id "ENSMUSE00001332179.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047071.1"; havana_transcript "OTTMUST00000121861.1";
mm10-chrY	HAVANA	gene	86540206	86543444	.	+	.	gene_id "ENSMUSG00000102110.1"; gene_type "lincRNA"; gene_name "Gm28440"; level 2; havana_gene "OTTMUSG00000047072.1";
mm10-chrY	HAVANA	transcript	86540206	86543444	.	+	.	gene_id "ENSMUSG00000102110.1"; transcript_id "ENSMUST00000186328.1"; gene_type "lincRNA"; gene_name "Gm28440"; transcript_type "lincRNA"; transcript_name "Gm28440-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047072.1"; havana_transcript "OTTMUST00000121862.1";
mm10-chrY	HAVANA	exon	86540206	86540845	.	+	.	gene_id "ENSMUSG00000102110.1"; transcript_id "ENSMUST00000186328.1"; gene_type "lincRNA"; gene_name "Gm28440"; transcript_type "lincRNA"; transcript_name "Gm28440-201"; exon_number 1; exon_id "ENSMUSE00001323917.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047072.1"; havana_transcript "OTTMUST00000121862.1";
mm10-chrY	HAVANA	exon	86541331	86541516	.	+	.	gene_id "ENSMUSG00000102110.1"; transcript_id "ENSMUST00000186328.1"; gene_type "lincRNA"; gene_name "Gm28440"; transcript_type "lincRNA"; transcript_name "Gm28440-201"; exon_number 2; exon_id "ENSMUSE00001328295.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047072.1"; havana_transcript "OTTMUST00000121862.1";
mm10-chrY	HAVANA	exon	86542245	86542428	.	+	.	gene_id "ENSMUSG00000102110.1"; transcript_id "ENSMUST00000186328.1"; gene_type "lincRNA"; gene_name "Gm28440"; transcript_type "lincRNA"; transcript_name "Gm28440-201"; exon_number 3; exon_id "ENSMUSE00001332189.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047072.1"; havana_transcript "OTTMUST00000121862.1";
mm10-chrY	HAVANA	exon	86542956	86543444	.	+	.	gene_id "ENSMUSG00000102110.1"; transcript_id "ENSMUST00000186328.1"; gene_type "lincRNA"; gene_name "Gm28440"; transcript_type "lincRNA"; transcript_name "Gm28440-201"; exon_number 4; exon_id "ENSMUSE00001323625.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047072.1"; havana_transcript "OTTMUST00000121862.1";
mm10-chrY	HAVANA	transcript	86540659	86543024	.	+	.	gene_id "ENSMUSG00000102110.1"; transcript_id "ENSMUST00000190645.1"; gene_type "lincRNA"; gene_name "Gm28440"; transcript_type "lincRNA"; transcript_name "Gm28440-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047072.1"; havana_transcript "OTTMUST00000121863.1";
mm10-chrY	HAVANA	exon	86540659	86540845	.	+	.	gene_id "ENSMUSG00000102110.1"; transcript_id "ENSMUST00000190645.1"; gene_type "lincRNA"; gene_name "Gm28440"; transcript_type "lincRNA"; transcript_name "Gm28440-202"; exon_number 1; exon_id "ENSMUSE00001329915.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047072.1"; havana_transcript "OTTMUST00000121863.1";
mm10-chrY	HAVANA	exon	86541335	86541516	.	+	.	gene_id "ENSMUSG00000102110.1"; transcript_id "ENSMUST00000190645.1"; gene_type "lincRNA"; gene_name "Gm28440"; transcript_type "lincRNA"; transcript_name "Gm28440-202"; exon_number 2; exon_id "ENSMUSE00001323687.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047072.1"; havana_transcript "OTTMUST00000121863.1";
mm10-chrY	HAVANA	exon	86542956	86543024	.	+	.	gene_id "ENSMUSG00000102110.1"; transcript_id "ENSMUST00000190645.1"; gene_type "lincRNA"; gene_name "Gm28440"; transcript_type "lincRNA"; transcript_name "Gm28440-202"; exon_number 3; exon_id "ENSMUSE00001324046.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047072.1"; havana_transcript "OTTMUST00000121863.1";
mm10-chrY	HAVANA	gene	86602267	86628474	.	+	.	gene_id "ENSMUSG00000100973.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; level 2; havana_gene "OTTMUSG00000047073.1";
mm10-chrY	HAVANA	transcript	86602267	86628474	.	+	.	gene_id "ENSMUSG00000100973.1"; transcript_id "ENSMUST00000185609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29299-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047073.1"; havana_transcript "OTTMUST00000121864.1";
mm10-chrY	HAVANA	exon	86602267	86602310	.	+	.	gene_id "ENSMUSG00000100973.1"; transcript_id "ENSMUST00000185609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29299-201"; exon_number 1; exon_id "ENSMUSE00001328027.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047073.1"; havana_transcript "OTTMUST00000121864.1";
mm10-chrY	HAVANA	exon	86603676	86603807	.	+	.	gene_id "ENSMUSG00000100973.1"; transcript_id "ENSMUST00000185609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29299-201"; exon_number 2; exon_id "ENSMUSE00001320209.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047073.1"; havana_transcript "OTTMUST00000121864.1";
mm10-chrY	HAVANA	exon	86609136	86609202	.	+	.	gene_id "ENSMUSG00000100973.1"; transcript_id "ENSMUST00000185609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29299-201"; exon_number 3; exon_id "ENSMUSE00001325750.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047073.1"; havana_transcript "OTTMUST00000121864.1";
mm10-chrY	HAVANA	exon	86609866	86609900	.	+	.	gene_id "ENSMUSG00000100973.1"; transcript_id "ENSMUST00000185609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29299-201"; exon_number 4; exon_id "ENSMUSE00001330498.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047073.1"; havana_transcript "OTTMUST00000121864.1";
mm10-chrY	HAVANA	exon	86616917	86616983	.	+	.	gene_id "ENSMUSG00000100973.1"; transcript_id "ENSMUST00000185609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29299-201"; exon_number 5; exon_id "ENSMUSE00001319451.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047073.1"; havana_transcript "OTTMUST00000121864.1";
mm10-chrY	HAVANA	exon	86617559	86617593	.	+	.	gene_id "ENSMUSG00000100973.1"; transcript_id "ENSMUST00000185609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29299-201"; exon_number 6; exon_id "ENSMUSE00001324218.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047073.1"; havana_transcript "OTTMUST00000121864.1";
mm10-chrY	HAVANA	exon	86624753	86624870	.	+	.	gene_id "ENSMUSG00000100973.1"; transcript_id "ENSMUST00000185609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29299-201"; exon_number 7; exon_id "ENSMUSE00001328961.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047073.1"; havana_transcript "OTTMUST00000121864.1";
mm10-chrY	HAVANA	exon	86625650	86625749	.	+	.	gene_id "ENSMUSG00000100973.1"; transcript_id "ENSMUST00000185609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29299-201"; exon_number 8; exon_id "ENSMUSE00001324739.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047073.1"; havana_transcript "OTTMUST00000121864.1";
mm10-chrY	HAVANA	exon	86627791	86627889	.	+	.	gene_id "ENSMUSG00000100973.1"; transcript_id "ENSMUST00000185609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29299-201"; exon_number 9; exon_id "ENSMUSE00001318165.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047073.1"; havana_transcript "OTTMUST00000121864.1";
mm10-chrY	HAVANA	exon	86628249	86628474	.	+	.	gene_id "ENSMUSG00000100973.1"; transcript_id "ENSMUST00000185609.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29299"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29299-201"; exon_number 10; exon_id "ENSMUSE00001323178.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047073.1"; havana_transcript "OTTMUST00000121864.1";
mm10-chrY	HAVANA	gene	86688655	86689350	.	-	.	gene_id "ENSMUSG00000099588.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29298"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047074.1";
mm10-chrY	HAVANA	transcript	86688655	86689350	.	-	.	gene_id "ENSMUSG00000099588.1"; transcript_id "ENSMUST00000186704.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29298"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29298-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047074.1"; havana_transcript "OTTMUST00000121865.1";
mm10-chrY	HAVANA	exon	86688655	86689350	.	-	.	gene_id "ENSMUSG00000099588.1"; transcript_id "ENSMUST00000186704.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29298"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29298-201"; exon_number 1; exon_id "ENSMUSE00001328234.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047074.1"; havana_transcript "OTTMUST00000121865.1";
mm10-chrY	HAVANA	gene	86725724	86726038	.	-	.	gene_id "ENSMUSG00000100028.1"; gene_type "processed_pseudogene"; gene_name "Gm29092"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047075.1";
mm10-chrY	HAVANA	transcript	86725724	86726038	.	-	.	gene_id "ENSMUSG00000100028.1"; transcript_id "ENSMUST00000190768.1"; gene_type "processed_pseudogene"; gene_name "Gm29092"; transcript_type "processed_pseudogene"; transcript_name "Gm29092-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047075.1"; havana_transcript "OTTMUST00000121866.1";
mm10-chrY	HAVANA	exon	86725724	86726038	.	-	.	gene_id "ENSMUSG00000100028.1"; transcript_id "ENSMUST00000190768.1"; gene_type "processed_pseudogene"; gene_name "Gm29092"; transcript_type "processed_pseudogene"; transcript_name "Gm29092-201"; exon_number 1; exon_id "ENSMUSE00001319324.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047075.1"; havana_transcript "OTTMUST00000121866.1";
mm10-chrY	HAVANA	gene	86727447	86730781	.	-	.	gene_id "ENSMUSG00000100350.1"; gene_type "lincRNA"; gene_name "Gm29091"; level 2; havana_gene "OTTMUSG00000047076.1";
mm10-chrY	HAVANA	transcript	86727447	86730781	.	-	.	gene_id "ENSMUSG00000100350.1"; transcript_id "ENSMUST00000187289.1"; gene_type "lincRNA"; gene_name "Gm29091"; transcript_type "lincRNA"; transcript_name "Gm29091-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047076.1"; havana_transcript "OTTMUST00000121867.1";
mm10-chrY	HAVANA	exon	86730559	86730781	.	-	.	gene_id "ENSMUSG00000100350.1"; transcript_id "ENSMUST00000187289.1"; gene_type "lincRNA"; gene_name "Gm29091"; transcript_type "lincRNA"; transcript_name "Gm29091-201"; exon_number 1; exon_id "ENSMUSE00001335408.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047076.1"; havana_transcript "OTTMUST00000121867.1";
mm10-chrY	HAVANA	exon	86727447	86729382	.	-	.	gene_id "ENSMUSG00000100350.1"; transcript_id "ENSMUST00000187289.1"; gene_type "lincRNA"; gene_name "Gm29091"; transcript_type "lincRNA"; transcript_name "Gm29091-201"; exon_number 2; exon_id "ENSMUSE00001327526.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047076.1"; havana_transcript "OTTMUST00000121867.1";
mm10-chrY	HAVANA	gene	86766062	86769299	.	+	.	gene_id "ENSMUSG00000100887.1"; gene_type "lincRNA"; gene_name "Gm29297"; level 2; havana_gene "OTTMUSG00000047077.1";
mm10-chrY	HAVANA	transcript	86766062	86769299	.	+	.	gene_id "ENSMUSG00000100887.1"; transcript_id "ENSMUST00000188186.1"; gene_type "lincRNA"; gene_name "Gm29297"; transcript_type "lincRNA"; transcript_name "Gm29297-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047077.1"; havana_transcript "OTTMUST00000121868.1";
mm10-chrY	HAVANA	exon	86766062	86766701	.	+	.	gene_id "ENSMUSG00000100887.1"; transcript_id "ENSMUST00000188186.1"; gene_type "lincRNA"; gene_name "Gm29297"; transcript_type "lincRNA"; transcript_name "Gm29297-202"; exon_number 1; exon_id "ENSMUSE00001324361.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047077.1"; havana_transcript "OTTMUST00000121868.1";
mm10-chrY	HAVANA	exon	86767187	86767372	.	+	.	gene_id "ENSMUSG00000100887.1"; transcript_id "ENSMUST00000188186.1"; gene_type "lincRNA"; gene_name "Gm29297"; transcript_type "lincRNA"; transcript_name "Gm29297-202"; exon_number 2; exon_id "ENSMUSE00001331672.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047077.1"; havana_transcript "OTTMUST00000121868.1";
mm10-chrY	HAVANA	exon	86768101	86768284	.	+	.	gene_id "ENSMUSG00000100887.1"; transcript_id "ENSMUST00000188186.1"; gene_type "lincRNA"; gene_name "Gm29297"; transcript_type "lincRNA"; transcript_name "Gm29297-202"; exon_number 3; exon_id "ENSMUSE00001320905.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047077.1"; havana_transcript "OTTMUST00000121868.1";
mm10-chrY	HAVANA	exon	86768811	86769299	.	+	.	gene_id "ENSMUSG00000100887.1"; transcript_id "ENSMUST00000188186.1"; gene_type "lincRNA"; gene_name "Gm29297"; transcript_type "lincRNA"; transcript_name "Gm29297-202"; exon_number 4; exon_id "ENSMUSE00001321940.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047077.1"; havana_transcript "OTTMUST00000121868.1";
mm10-chrY	HAVANA	transcript	86766516	86768879	.	+	.	gene_id "ENSMUSG00000100887.1"; transcript_id "ENSMUST00000186580.1"; gene_type "lincRNA"; gene_name "Gm29297"; transcript_type "lincRNA"; transcript_name "Gm29297-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047077.1"; havana_transcript "OTTMUST00000121869.1";
mm10-chrY	HAVANA	exon	86766516	86766701	.	+	.	gene_id "ENSMUSG00000100887.1"; transcript_id "ENSMUST00000186580.1"; gene_type "lincRNA"; gene_name "Gm29297"; transcript_type "lincRNA"; transcript_name "Gm29297-201"; exon_number 1; exon_id "ENSMUSE00001321012.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047077.1"; havana_transcript "OTTMUST00000121869.1";
mm10-chrY	HAVANA	exon	86767191	86767372	.	+	.	gene_id "ENSMUSG00000100887.1"; transcript_id "ENSMUST00000186580.1"; gene_type "lincRNA"; gene_name "Gm29297"; transcript_type "lincRNA"; transcript_name "Gm29297-201"; exon_number 2; exon_id "ENSMUSE00001335766.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047077.1"; havana_transcript "OTTMUST00000121869.1";
mm10-chrY	HAVANA	exon	86768811	86768879	.	+	.	gene_id "ENSMUSG00000100887.1"; transcript_id "ENSMUST00000186580.1"; gene_type "lincRNA"; gene_name "Gm29297"; transcript_type "lincRNA"; transcript_name "Gm29297-201"; exon_number 3; exon_id "ENSMUSE00001333579.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047077.1"; havana_transcript "OTTMUST00000121869.1";
mm10-chrY	HAVANA	gene	86869360	86870055	.	-	.	gene_id "ENSMUSG00000100655.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21462"; level 2; havana_gene "OTTMUSG00000047078.1";
mm10-chrY	HAVANA	transcript	86869360	86870055	.	-	.	gene_id "ENSMUSG00000100655.1"; transcript_id "ENSMUST00000186803.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21462"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21462-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047078.1"; havana_transcript "OTTMUST00000121870.1";
mm10-chrY	HAVANA	exon	86869360	86870055	.	-	.	gene_id "ENSMUSG00000100655.1"; transcript_id "ENSMUST00000186803.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21462"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21462-201"; exon_number 1; exon_id "ENSMUSE00001335549.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047078.1"; havana_transcript "OTTMUST00000121870.1";
mm10-chrY	HAVANA	gene	86943624	86944319	.	-	.	gene_id "ENSMUSG00000101670.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21470"; level 2; havana_gene "OTTMUSG00000047079.1";
mm10-chrY	HAVANA	transcript	86943624	86944319	.	-	.	gene_id "ENSMUSG00000101670.1"; transcript_id "ENSMUST00000187680.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21470"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21470-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047079.1"; havana_transcript "OTTMUST00000121871.1";
mm10-chrY	HAVANA	exon	86943624	86944319	.	-	.	gene_id "ENSMUSG00000101670.1"; transcript_id "ENSMUST00000187680.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21470"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21470-201"; exon_number 1; exon_id "ENSMUSE00001319841.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047079.1"; havana_transcript "OTTMUST00000121871.1";
mm10-chrY	HAVANA	gene	86975961	86976575	.	-	.	gene_id "ENSMUSG00000100773.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28366"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047080.1";
mm10-chrY	HAVANA	transcript	86975961	86976575	.	-	.	gene_id "ENSMUSG00000100773.1"; transcript_id "ENSMUST00000190147.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28366"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28366-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047080.1"; havana_transcript "OTTMUST00000121872.1";
mm10-chrY	HAVANA	exon	86975961	86976575	.	-	.	gene_id "ENSMUSG00000100773.1"; transcript_id "ENSMUST00000190147.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28366"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28366-201"; exon_number 1; exon_id "ENSMUSE00001326564.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047080.1"; havana_transcript "OTTMUST00000121872.1";
mm10-chrY	HAVANA	gene	87012768	87013463	.	-	.	gene_id "ENSMUSG00000101829.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21752"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047081.1";
mm10-chrY	HAVANA	transcript	87012768	87013463	.	-	.	gene_id "ENSMUSG00000101829.1"; transcript_id "ENSMUST00000191023.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21752"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21752-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047081.1"; havana_transcript "OTTMUST00000121873.1";
mm10-chrY	HAVANA	exon	87012768	87013463	.	-	.	gene_id "ENSMUSG00000101829.1"; transcript_id "ENSMUST00000191023.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21752"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21752-201"; exon_number 1; exon_id "ENSMUSE00001323706.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047081.1"; havana_transcript "OTTMUST00000121873.1";
mm10-chrY	HAVANA	gene	87054717	87057954	.	+	.	gene_id "ENSMUSG00000099496.1"; gene_type "lincRNA"; gene_name "Gm28365"; level 2; havana_gene "OTTMUSG00000047082.1";
mm10-chrY	HAVANA	transcript	87054717	87057954	.	+	.	gene_id "ENSMUSG00000099496.1"; transcript_id "ENSMUST00000189584.1"; gene_type "lincRNA"; gene_name "Gm28365"; transcript_type "lincRNA"; transcript_name "Gm28365-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047082.1"; havana_transcript "OTTMUST00000121874.1";
mm10-chrY	HAVANA	exon	87054717	87055355	.	+	.	gene_id "ENSMUSG00000099496.1"; transcript_id "ENSMUST00000189584.1"; gene_type "lincRNA"; gene_name "Gm28365"; transcript_type "lincRNA"; transcript_name "Gm28365-202"; exon_number 1; exon_id "ENSMUSE00001333436.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047082.1"; havana_transcript "OTTMUST00000121874.1";
mm10-chrY	HAVANA	exon	87055841	87056026	.	+	.	gene_id "ENSMUSG00000099496.1"; transcript_id "ENSMUST00000189584.1"; gene_type "lincRNA"; gene_name "Gm28365"; transcript_type "lincRNA"; transcript_name "Gm28365-202"; exon_number 2; exon_id "ENSMUSE00001329387.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047082.1"; havana_transcript "OTTMUST00000121874.1";
mm10-chrY	HAVANA	exon	87056756	87056939	.	+	.	gene_id "ENSMUSG00000099496.1"; transcript_id "ENSMUST00000189584.1"; gene_type "lincRNA"; gene_name "Gm28365"; transcript_type "lincRNA"; transcript_name "Gm28365-202"; exon_number 3; exon_id "ENSMUSE00001331026.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047082.1"; havana_transcript "OTTMUST00000121874.1";
mm10-chrY	HAVANA	exon	87057466	87057954	.	+	.	gene_id "ENSMUSG00000099496.1"; transcript_id "ENSMUST00000189584.1"; gene_type "lincRNA"; gene_name "Gm28365"; transcript_type "lincRNA"; transcript_name "Gm28365-202"; exon_number 4; exon_id "ENSMUSE00001334244.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047082.1"; havana_transcript "OTTMUST00000121874.1";
mm10-chrY	HAVANA	transcript	87055169	87057534	.	+	.	gene_id "ENSMUSG00000099496.1"; transcript_id "ENSMUST00000188055.1"; gene_type "lincRNA"; gene_name "Gm28365"; transcript_type "lincRNA"; transcript_name "Gm28365-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047082.1"; havana_transcript "OTTMUST00000121875.1";
mm10-chrY	HAVANA	exon	87055169	87055355	.	+	.	gene_id "ENSMUSG00000099496.1"; transcript_id "ENSMUST00000188055.1"; gene_type "lincRNA"; gene_name "Gm28365"; transcript_type "lincRNA"; transcript_name "Gm28365-201"; exon_number 1; exon_id "ENSMUSE00001334427.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047082.1"; havana_transcript "OTTMUST00000121875.1";
mm10-chrY	HAVANA	exon	87055845	87056026	.	+	.	gene_id "ENSMUSG00000099496.1"; transcript_id "ENSMUST00000188055.1"; gene_type "lincRNA"; gene_name "Gm28365"; transcript_type "lincRNA"; transcript_name "Gm28365-201"; exon_number 2; exon_id "ENSMUSE00001320069.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047082.1"; havana_transcript "OTTMUST00000121875.1";
mm10-chrY	HAVANA	exon	87057466	87057534	.	+	.	gene_id "ENSMUSG00000099496.1"; transcript_id "ENSMUST00000188055.1"; gene_type "lincRNA"; gene_name "Gm28365"; transcript_type "lincRNA"; transcript_name "Gm28365-201"; exon_number 3; exon_id "ENSMUSE00001322585.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047082.1"; havana_transcript "OTTMUST00000121875.1";
mm10-chrY	HAVANA	gene	87116821	87142917	.	+	.	gene_id "ENSMUSG00000094399.7"; gene_type "protein_coding"; gene_name "Gm21477"; level 2; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	HAVANA	transcript	87116821	87142917	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	exon	87116821	87116864	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 1; exon_id "ENSMUSE00001323943.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	exon	87118232	87118363	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 2; exon_id "ENSMUSE00001334288.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	CDS	87118246	87118363	.	+	0	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 2; exon_id "ENSMUSE00001334288.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	start_codon	87118246	87118248	.	+	0	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 2; exon_id "ENSMUSE00001334288.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	exon	87123689	87123755	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 3; exon_id "ENSMUSE00001072418.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	CDS	87123689	87123755	.	+	2	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 3; exon_id "ENSMUSE00001072418.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	exon	87124322	87124356	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 4; exon_id "ENSMUSE00000970960.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	CDS	87124322	87124356	.	+	1	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 4; exon_id "ENSMUSE00000970960.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	exon	87131379	87131445	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 5; exon_id "ENSMUSE00001063611.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	CDS	87131379	87131445	.	+	2	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 5; exon_id "ENSMUSE00001063611.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	exon	87132024	87132058	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 6; exon_id "ENSMUSE00001062379.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	CDS	87132024	87132058	.	+	1	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 6; exon_id "ENSMUSE00001062379.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	exon	87139214	87139331	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 7; exon_id "ENSMUSE00000966929.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	CDS	87139214	87139331	.	+	2	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 7; exon_id "ENSMUSE00000966929.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	exon	87140089	87140188	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 8; exon_id "ENSMUSE00001320646.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	CDS	87140089	87140188	.	+	1	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 8; exon_id "ENSMUSE00001320646.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	exon	87142233	87142331	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 9; exon_id "ENSMUSE00001330187.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	CDS	87142233	87142331	.	+	0	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 9; exon_id "ENSMUSE00001330187.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	exon	87142691	87142917	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 10; exon_id "ENSMUSE00001319382.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	CDS	87142691	87142717	.	+	0	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 10; exon_id "ENSMUSE00001319382.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	stop_codon	87142718	87142720	.	+	0	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 10; exon_id "ENSMUSE00001319382.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	UTR	87116821	87116864	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 1; exon_id "ENSMUSE00001323943.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	UTR	87118232	87118245	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 2; exon_id "ENSMUSE00001334288.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	HAVANA	UTR	87142718	87142917	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000189543.6"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-202"; exon_number 10; exon_id "ENSMUSE00001319382.1"; level 2; protein_id "ENSMUSP00000140238.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047083.1"; havana_transcript "OTTMUST00000121876.1";
mm10-chrY	ENSEMBL	transcript	87118255	87140155	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	exon	87118255	87118363	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 1; exon_id "ENSMUSE00001037843.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	CDS	87118255	87118363	.	+	0	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 1; exon_id "ENSMUSE00001037843.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	start_codon	87118255	87118257	.	+	0	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 1; exon_id "ENSMUSE00001037843.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	exon	87123689	87123755	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 2; exon_id "ENSMUSE00001072418.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	CDS	87123689	87123755	.	+	2	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 2; exon_id "ENSMUSE00001072418.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	exon	87124322	87124356	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 3; exon_id "ENSMUSE00000970960.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	CDS	87124322	87124356	.	+	1	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 3; exon_id "ENSMUSE00000970960.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	exon	87131379	87131445	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 4; exon_id "ENSMUSE00001063611.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	CDS	87131379	87131445	.	+	2	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 4; exon_id "ENSMUSE00001063611.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	exon	87132024	87132058	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 5; exon_id "ENSMUSE00001062379.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	CDS	87132024	87132058	.	+	1	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 5; exon_id "ENSMUSE00001062379.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	exon	87139214	87139331	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 6; exon_id "ENSMUSE00000966929.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	CDS	87139214	87139331	.	+	2	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 6; exon_id "ENSMUSE00000966929.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	exon	87140089	87140155	.	+	.	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 7; exon_id "ENSMUSE00001085794.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	ENSEMBL	CDS	87140089	87140155	.	+	1	gene_id "ENSMUSG00000094399.7"; transcript_id "ENSMUST00000179970.1"; gene_type "protein_coding"; gene_name "Gm21477"; transcript_type "protein_coding"; transcript_name "Gm21477-201"; exon_number 7; exon_id "ENSMUSE00001085794.1"; level 3; protein_id "ENSMUSP00000135953.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047083.1";
mm10-chrY	HAVANA	gene	87203169	87203864	.	-	.	gene_id "ENSMUSG00000099912.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28368"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047084.1";
mm10-chrY	HAVANA	transcript	87203169	87203864	.	-	.	gene_id "ENSMUSG00000099912.1"; transcript_id "ENSMUST00000189804.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28368"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28368-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047084.1"; havana_transcript "OTTMUST00000121877.1";
mm10-chrY	HAVANA	exon	87203169	87203864	.	-	.	gene_id "ENSMUSG00000099912.1"; transcript_id "ENSMUST00000189804.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28368"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28368-201"; exon_number 1; exon_id "ENSMUSE00001326707.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047084.1"; havana_transcript "OTTMUST00000121877.1";
mm10-chrY	HAVANA	gene	87240115	87240429	.	-	.	gene_id "ENSMUSG00000100377.1"; gene_type "processed_pseudogene"; gene_name "Gm28369"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047085.1";
mm10-chrY	HAVANA	transcript	87240115	87240429	.	-	.	gene_id "ENSMUSG00000100377.1"; transcript_id "ENSMUST00000188993.1"; gene_type "processed_pseudogene"; gene_name "Gm28369"; transcript_type "processed_pseudogene"; transcript_name "Gm28369-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047085.1"; havana_transcript "OTTMUST00000121878.1";
mm10-chrY	HAVANA	exon	87240115	87240429	.	-	.	gene_id "ENSMUSG00000100377.1"; transcript_id "ENSMUST00000188993.1"; gene_type "processed_pseudogene"; gene_name "Gm28369"; transcript_type "processed_pseudogene"; transcript_name "Gm28369-201"; exon_number 1; exon_id "ENSMUSE00001331504.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047085.1"; havana_transcript "OTTMUST00000121878.1";
mm10-chrY	HAVANA	gene	87277136	87280371	.	+	.	gene_id "ENSMUSG00000100243.1"; gene_type "lincRNA"; gene_name "Gm28367"; level 2; havana_gene "OTTMUSG00000047086.1";
mm10-chrY	HAVANA	transcript	87277136	87280371	.	+	.	gene_id "ENSMUSG00000100243.1"; transcript_id "ENSMUST00000187942.1"; gene_type "lincRNA"; gene_name "Gm28367"; transcript_type "lincRNA"; transcript_name "Gm28367-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047086.1"; havana_transcript "OTTMUST00000121879.1";
mm10-chrY	HAVANA	exon	87277136	87277773	.	+	.	gene_id "ENSMUSG00000100243.1"; transcript_id "ENSMUST00000187942.1"; gene_type "lincRNA"; gene_name "Gm28367"; transcript_type "lincRNA"; transcript_name "Gm28367-201"; exon_number 1; exon_id "ENSMUSE00001329635.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047086.1"; havana_transcript "OTTMUST00000121879.1";
mm10-chrY	HAVANA	exon	87278259	87278444	.	+	.	gene_id "ENSMUSG00000100243.1"; transcript_id "ENSMUST00000187942.1"; gene_type "lincRNA"; gene_name "Gm28367"; transcript_type "lincRNA"; transcript_name "Gm28367-201"; exon_number 2; exon_id "ENSMUSE00001327811.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047086.1"; havana_transcript "OTTMUST00000121879.1";
mm10-chrY	HAVANA	exon	87279174	87279357	.	+	.	gene_id "ENSMUSG00000100243.1"; transcript_id "ENSMUST00000187942.1"; gene_type "lincRNA"; gene_name "Gm28367"; transcript_type "lincRNA"; transcript_name "Gm28367-201"; exon_number 3; exon_id "ENSMUSE00001330355.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047086.1"; havana_transcript "OTTMUST00000121879.1";
mm10-chrY	HAVANA	exon	87279884	87280371	.	+	.	gene_id "ENSMUSG00000100243.1"; transcript_id "ENSMUST00000187942.1"; gene_type "lincRNA"; gene_name "Gm28367"; transcript_type "lincRNA"; transcript_name "Gm28367-201"; exon_number 4; exon_id "ENSMUSE00001327368.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047086.1"; havana_transcript "OTTMUST00000121879.1";
mm10-chrY	HAVANA	transcript	87277588	87279952	.	+	.	gene_id "ENSMUSG00000100243.1"; transcript_id "ENSMUST00000189803.1"; gene_type "lincRNA"; gene_name "Gm28367"; transcript_type "lincRNA"; transcript_name "Gm28367-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047086.1"; havana_transcript "OTTMUST00000121880.1";
mm10-chrY	HAVANA	exon	87277588	87277773	.	+	.	gene_id "ENSMUSG00000100243.1"; transcript_id "ENSMUST00000189803.1"; gene_type "lincRNA"; gene_name "Gm28367"; transcript_type "lincRNA"; transcript_name "Gm28367-202"; exon_number 1; exon_id "ENSMUSE00001328526.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047086.1"; havana_transcript "OTTMUST00000121880.1";
mm10-chrY	HAVANA	exon	87278263	87278444	.	+	.	gene_id "ENSMUSG00000100243.1"; transcript_id "ENSMUST00000189803.1"; gene_type "lincRNA"; gene_name "Gm28367"; transcript_type "lincRNA"; transcript_name "Gm28367-202"; exon_number 2; exon_id "ENSMUSE00001336001.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047086.1"; havana_transcript "OTTMUST00000121880.1";
mm10-chrY	HAVANA	exon	87279884	87279952	.	+	.	gene_id "ENSMUSG00000100243.1"; transcript_id "ENSMUST00000189803.1"; gene_type "lincRNA"; gene_name "Gm28367"; transcript_type "lincRNA"; transcript_name "Gm28367-202"; exon_number 3; exon_id "ENSMUSE00001319567.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047086.1"; havana_transcript "OTTMUST00000121880.1";
mm10-chrY	HAVANA	gene	87410364	87410978	.	-	.	gene_id "ENSMUSG00000101902.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29115"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047136.1";
mm10-chrY	HAVANA	transcript	87410364	87410978	.	-	.	gene_id "ENSMUSG00000101902.1"; transcript_id "ENSMUST00000189870.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29115"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29115-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047136.1"; havana_transcript "OTTMUST00000121966.1";
mm10-chrY	HAVANA	exon	87410364	87410978	.	-	.	gene_id "ENSMUSG00000101902.1"; transcript_id "ENSMUST00000189870.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29115"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29115-201"; exon_number 1; exon_id "ENSMUSE00001321796.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047136.1"; havana_transcript "OTTMUST00000121966.1";
mm10-chrY	HAVANA	gene	87447169	87447864	.	-	.	gene_id "ENSMUSG00000102132.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21813"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047137.1";
mm10-chrY	HAVANA	transcript	87447169	87447864	.	-	.	gene_id "ENSMUSG00000102132.1"; transcript_id "ENSMUST00000191291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21813"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21813-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047137.1"; havana_transcript "OTTMUST00000121967.1";
mm10-chrY	HAVANA	exon	87447169	87447864	.	-	.	gene_id "ENSMUSG00000102132.1"; transcript_id "ENSMUST00000191291.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21813"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21813-201"; exon_number 1; exon_id "ENSMUSE00001323693.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047137.1"; havana_transcript "OTTMUST00000121967.1";
mm10-chrY	HAVANA	gene	87550966	87575691	.	+	.	gene_id "ENSMUSG00000099856.1"; gene_type "protein_coding"; gene_name "Gm20906"; level 2; havana_gene "OTTMUSG00000047138.1";
mm10-chrY	HAVANA	transcript	87550966	87575691	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	exon	87550966	87551009	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 1; exon_id "ENSMUSE00001328948.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	exon	87552379	87552510	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 2; exon_id "ENSMUSE00001323559.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	CDS	87552393	87552510	.	+	0	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 2; exon_id "ENSMUSE00001323559.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	start_codon	87552393	87552395	.	+	0	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 2; exon_id "ENSMUSE00001323559.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	exon	87557839	87557905	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 3; exon_id "ENSMUSE00001318187.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	CDS	87557839	87557905	.	+	2	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 3; exon_id "ENSMUSE00001318187.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	exon	87558557	87558591	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 4; exon_id "ENSMUSE00001318132.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	CDS	87558557	87558591	.	+	1	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 4; exon_id "ENSMUSE00001318132.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	exon	87565649	87565715	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 5; exon_id "ENSMUSE00001335583.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	CDS	87565649	87565715	.	+	2	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 5; exon_id "ENSMUSE00001335583.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	exon	87566296	87566330	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 6; exon_id "ENSMUSE00001318872.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	CDS	87566296	87566330	.	+	1	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 6; exon_id "ENSMUSE00001318872.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	exon	87573499	87573616	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 7; exon_id "ENSMUSE00001330290.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	CDS	87573499	87573616	.	+	2	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 7; exon_id "ENSMUSE00001330290.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	exon	87574384	87574483	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 8; exon_id "ENSMUSE00001327292.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	CDS	87574384	87574483	.	+	1	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 8; exon_id "ENSMUSE00001327292.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	exon	87575008	87575106	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 9; exon_id "ENSMUSE00001318614.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	CDS	87575008	87575106	.	+	0	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 9; exon_id "ENSMUSE00001318614.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	exon	87575466	87575691	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 10; exon_id "ENSMUSE00001318175.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	CDS	87575466	87575492	.	+	0	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 10; exon_id "ENSMUSE00001318175.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	stop_codon	87575493	87575495	.	+	0	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 10; exon_id "ENSMUSE00001318175.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	UTR	87550966	87551009	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 1; exon_id "ENSMUSE00001328948.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	UTR	87552379	87552392	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 2; exon_id "ENSMUSE00001323559.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	UTR	87575493	87575691	.	+	.	gene_id "ENSMUSG00000099856.1"; transcript_id "ENSMUST00000186493.1"; gene_type "protein_coding"; gene_name "Gm20906"; transcript_type "protein_coding"; transcript_name "Gm20906-201"; exon_number 10; exon_id "ENSMUSE00001318175.1"; level 2; protein_id "ENSMUSP00000140305.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047138.1"; havana_transcript "OTTMUST00000121968.1";
mm10-chrY	HAVANA	gene	87636006	87636701	.	-	.	gene_id "ENSMUSG00000101241.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29111"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047139.1";
mm10-chrY	HAVANA	transcript	87636006	87636701	.	-	.	gene_id "ENSMUSG00000101241.1"; transcript_id "ENSMUST00000188823.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29111"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29111-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047139.1"; havana_transcript "OTTMUST00000121969.1";
mm10-chrY	HAVANA	exon	87636006	87636701	.	-	.	gene_id "ENSMUSG00000101241.1"; transcript_id "ENSMUST00000188823.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29111"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29111-201"; exon_number 1; exon_id "ENSMUSE00001325779.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047139.1"; havana_transcript "OTTMUST00000121969.1";
mm10-chrY	HAVANA	gene	87672938	87673252	.	-	.	gene_id "ENSMUSG00000100695.1"; gene_type "processed_pseudogene"; gene_name "Gm28110"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047140.1";
mm10-chrY	HAVANA	transcript	87672938	87673252	.	-	.	gene_id "ENSMUSG00000100695.1"; transcript_id "ENSMUST00000185782.1"; gene_type "processed_pseudogene"; gene_name "Gm28110"; transcript_type "processed_pseudogene"; transcript_name "Gm28110-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047140.1"; havana_transcript "OTTMUST00000121970.1";
mm10-chrY	HAVANA	exon	87672938	87673252	.	-	.	gene_id "ENSMUSG00000100695.1"; transcript_id "ENSMUST00000185782.1"; gene_type "processed_pseudogene"; gene_name "Gm28110"; transcript_type "processed_pseudogene"; transcript_name "Gm28110-201"; exon_number 1; exon_id "ENSMUSE00001318408.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047140.1"; havana_transcript "OTTMUST00000121970.1";
mm10-chrY	HAVANA	gene	87674664	87678004	.	-	.	gene_id "ENSMUSG00000101866.1"; gene_type "lincRNA"; gene_name "Gm28109"; level 2; havana_gene "OTTMUSG00000047141.1";
mm10-chrY	HAVANA	transcript	87674664	87678004	.	-	.	gene_id "ENSMUSG00000101866.1"; transcript_id "ENSMUST00000189979.1"; gene_type "lincRNA"; gene_name "Gm28109"; transcript_type "lincRNA"; transcript_name "Gm28109-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047141.1"; havana_transcript "OTTMUST00000121971.1";
mm10-chrY	HAVANA	exon	87677782	87678004	.	-	.	gene_id "ENSMUSG00000101866.1"; transcript_id "ENSMUST00000189979.1"; gene_type "lincRNA"; gene_name "Gm28109"; transcript_type "lincRNA"; transcript_name "Gm28109-201"; exon_number 1; exon_id "ENSMUSE00001330759.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047141.1"; havana_transcript "OTTMUST00000121971.1";
mm10-chrY	HAVANA	exon	87674664	87676607	.	-	.	gene_id "ENSMUSG00000101866.1"; transcript_id "ENSMUST00000189979.1"; gene_type "lincRNA"; gene_name "Gm28109"; transcript_type "lincRNA"; transcript_name "Gm28109-201"; exon_number 2; exon_id "ENSMUSE00001328887.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047141.1"; havana_transcript "OTTMUST00000121971.1";
mm10-chrY	HAVANA	gene	87709966	87713202	.	+	.	gene_id "ENSMUSG00000101931.1"; gene_type "lincRNA"; gene_name "Gm28108"; level 2; havana_gene "OTTMUSG00000047142.1";
mm10-chrY	HAVANA	transcript	87709966	87713202	.	+	.	gene_id "ENSMUSG00000101931.1"; transcript_id "ENSMUST00000186747.1"; gene_type "lincRNA"; gene_name "Gm28108"; transcript_type "lincRNA"; transcript_name "Gm28108-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047142.1"; havana_transcript "OTTMUST00000121972.1";
mm10-chrY	HAVANA	exon	87709966	87710603	.	+	.	gene_id "ENSMUSG00000101931.1"; transcript_id "ENSMUST00000186747.1"; gene_type "lincRNA"; gene_name "Gm28108"; transcript_type "lincRNA"; transcript_name "Gm28108-201"; exon_number 1; exon_id "ENSMUSE00001333065.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047142.1"; havana_transcript "OTTMUST00000121972.1";
mm10-chrY	HAVANA	exon	87711089	87711274	.	+	.	gene_id "ENSMUSG00000101931.1"; transcript_id "ENSMUST00000186747.1"; gene_type "lincRNA"; gene_name "Gm28108"; transcript_type "lincRNA"; transcript_name "Gm28108-201"; exon_number 2; exon_id "ENSMUSE00001320370.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047142.1"; havana_transcript "OTTMUST00000121972.1";
mm10-chrY	HAVANA	exon	87712004	87712187	.	+	.	gene_id "ENSMUSG00000101931.1"; transcript_id "ENSMUST00000186747.1"; gene_type "lincRNA"; gene_name "Gm28108"; transcript_type "lincRNA"; transcript_name "Gm28108-201"; exon_number 3; exon_id "ENSMUSE00001333260.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047142.1"; havana_transcript "OTTMUST00000121972.1";
mm10-chrY	HAVANA	exon	87712714	87713202	.	+	.	gene_id "ENSMUSG00000101931.1"; transcript_id "ENSMUST00000186747.1"; gene_type "lincRNA"; gene_name "Gm28108"; transcript_type "lincRNA"; transcript_name "Gm28108-201"; exon_number 4; exon_id "ENSMUSE00001319101.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047142.1"; havana_transcript "OTTMUST00000121972.1";
mm10-chrY	HAVANA	transcript	87710417	87712782	.	+	.	gene_id "ENSMUSG00000101931.1"; transcript_id "ENSMUST00000191442.1"; gene_type "lincRNA"; gene_name "Gm28108"; transcript_type "lincRNA"; transcript_name "Gm28108-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047142.1"; havana_transcript "OTTMUST00000121973.1";
mm10-chrY	HAVANA	exon	87710417	87710603	.	+	.	gene_id "ENSMUSG00000101931.1"; transcript_id "ENSMUST00000191442.1"; gene_type "lincRNA"; gene_name "Gm28108"; transcript_type "lincRNA"; transcript_name "Gm28108-202"; exon_number 1; exon_id "ENSMUSE00001318591.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047142.1"; havana_transcript "OTTMUST00000121973.1";
mm10-chrY	HAVANA	exon	87711093	87711274	.	+	.	gene_id "ENSMUSG00000101931.1"; transcript_id "ENSMUST00000191442.1"; gene_type "lincRNA"; gene_name "Gm28108"; transcript_type "lincRNA"; transcript_name "Gm28108-202"; exon_number 2; exon_id "ENSMUSE00001333986.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047142.1"; havana_transcript "OTTMUST00000121973.1";
mm10-chrY	HAVANA	exon	87712714	87712782	.	+	.	gene_id "ENSMUSG00000101931.1"; transcript_id "ENSMUST00000191442.1"; gene_type "lincRNA"; gene_name "Gm28108"; transcript_type "lincRNA"; transcript_name "Gm28108-202"; exon_number 3; exon_id "ENSMUSE00001321372.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047142.1"; havana_transcript "OTTMUST00000121973.1";
mm10-chrY	HAVANA	gene	87824876	87825571	.	-	.	gene_id "ENSMUSG00000100355.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28107"; level 2; havana_gene "OTTMUSG00000047143.1";
mm10-chrY	HAVANA	transcript	87824876	87825571	.	-	.	gene_id "ENSMUSG00000100355.1"; transcript_id "ENSMUST00000191118.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28107"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28107-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047143.1"; havana_transcript "OTTMUST00000121974.1";
mm10-chrY	HAVANA	exon	87824876	87825571	.	-	.	gene_id "ENSMUSG00000100355.1"; transcript_id "ENSMUST00000191118.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28107"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28107-201"; exon_number 1; exon_id "ENSMUSE00001324546.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047143.1"; havana_transcript "OTTMUST00000121974.1";
mm10-chrY	HAVANA	gene	87907268	87907882	.	+	.	gene_id "ENSMUSG00000101646.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28106"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047144.1";
mm10-chrY	HAVANA	transcript	87907268	87907882	.	+	.	gene_id "ENSMUSG00000101646.1"; transcript_id "ENSMUST00000187640.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28106"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28106-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047144.1"; havana_transcript "OTTMUST00000121975.1";
mm10-chrY	HAVANA	exon	87907268	87907882	.	+	.	gene_id "ENSMUSG00000101646.1"; transcript_id "ENSMUST00000187640.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28106"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28106-201"; exon_number 1; exon_id "ENSMUSE00001322424.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047144.1"; havana_transcript "OTTMUST00000121975.1";
mm10-chrY	HAVANA	gene	87948683	87949376	.	-	.	gene_id "ENSMUSG00000101250.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28105"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047145.1";
mm10-chrY	HAVANA	transcript	87948683	87949376	.	-	.	gene_id "ENSMUSG00000101250.1"; transcript_id "ENSMUST00000187788.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28105"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28105-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047145.1"; havana_transcript "OTTMUST00000121976.1";
mm10-chrY	HAVANA	exon	87948683	87949376	.	-	.	gene_id "ENSMUSG00000101250.1"; transcript_id "ENSMUST00000187788.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28105"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28105-201"; exon_number 1; exon_id "ENSMUSE00001319437.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047145.1"; havana_transcript "OTTMUST00000121976.1";
mm10-chrY	HAVANA	gene	87955242	87958590	.	-	.	gene_id "ENSMUSG00000100352.1"; gene_type "lincRNA"; gene_name "Gm28104"; level 2; havana_gene "OTTMUSG00000047146.1";
mm10-chrY	HAVANA	transcript	87955242	87958590	.	-	.	gene_id "ENSMUSG00000100352.1"; transcript_id "ENSMUST00000188331.1"; gene_type "lincRNA"; gene_name "Gm28104"; transcript_type "lincRNA"; transcript_name "Gm28104-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047146.1"; havana_transcript "OTTMUST00000121977.1";
mm10-chrY	HAVANA	exon	87958368	87958590	.	-	.	gene_id "ENSMUSG00000100352.1"; transcript_id "ENSMUST00000188331.1"; gene_type "lincRNA"; gene_name "Gm28104"; transcript_type "lincRNA"; transcript_name "Gm28104-201"; exon_number 1; exon_id "ENSMUSE00001318361.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047146.1"; havana_transcript "OTTMUST00000121977.1";
mm10-chrY	HAVANA	exon	87955242	87957186	.	-	.	gene_id "ENSMUSG00000100352.1"; transcript_id "ENSMUST00000188331.1"; gene_type "lincRNA"; gene_name "Gm28104"; transcript_type "lincRNA"; transcript_name "Gm28104-201"; exon_number 2; exon_id "ENSMUSE00001333310.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047146.1"; havana_transcript "OTTMUST00000121977.1";
mm10-chrY	HAVANA	gene	87987924	87994644	.	-	.	gene_id "ENSMUSG00000100682.1"; gene_type "lincRNA"; gene_name "Gm28103"; level 2; havana_gene "OTTMUSG00000047147.1";
mm10-chrY	HAVANA	transcript	87987924	87994644	.	-	.	gene_id "ENSMUSG00000100682.1"; transcript_id "ENSMUST00000188392.1"; gene_type "lincRNA"; gene_name "Gm28103"; transcript_type "lincRNA"; transcript_name "Gm28103-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047147.1"; havana_transcript "OTTMUST00000121978.1";
mm10-chrY	HAVANA	exon	87994484	87994644	.	-	.	gene_id "ENSMUSG00000100682.1"; transcript_id "ENSMUST00000188392.1"; gene_type "lincRNA"; gene_name "Gm28103"; transcript_type "lincRNA"; transcript_name "Gm28103-201"; exon_number 1; exon_id "ENSMUSE00001321833.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047147.1"; havana_transcript "OTTMUST00000121978.1";
mm10-chrY	HAVANA	exon	87989477	87989568	.	-	.	gene_id "ENSMUSG00000100682.1"; transcript_id "ENSMUST00000188392.1"; gene_type "lincRNA"; gene_name "Gm28103"; transcript_type "lincRNA"; transcript_name "Gm28103-201"; exon_number 2; exon_id "ENSMUSE00001330108.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047147.1"; havana_transcript "OTTMUST00000121978.1";
mm10-chrY	HAVANA	exon	87987924	87988086	.	-	.	gene_id "ENSMUSG00000100682.1"; transcript_id "ENSMUST00000188392.1"; gene_type "lincRNA"; gene_name "Gm28103"; transcript_type "lincRNA"; transcript_name "Gm28103-201"; exon_number 3; exon_id "ENSMUSE00001332574.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047147.1"; havana_transcript "OTTMUST00000121978.1";
mm10-chrY	HAVANA	gene	88053315	88079494	.	+	.	gene_id "ENSMUSG00000101915.1"; gene_type "protein_coding"; gene_name "Gm28102"; level 2; havana_gene "OTTMUSG00000047149.1";
mm10-chrY	HAVANA	transcript	88053315	88079494	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	exon	88053315	88053358	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 1; exon_id "ENSMUSE00001321231.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	exon	88054724	88054855	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 2; exon_id "ENSMUSE00001333008.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	CDS	88054738	88054855	.	+	0	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 2; exon_id "ENSMUSE00001333008.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	start_codon	88054738	88054740	.	+	0	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 2; exon_id "ENSMUSE00001333008.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	exon	88060191	88060257	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 3; exon_id "ENSMUSE00001324108.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	CDS	88060191	88060257	.	+	2	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 3; exon_id "ENSMUSE00001324108.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	exon	88060880	88060914	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 4; exon_id "ENSMUSE00001324481.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	CDS	88060880	88060914	.	+	1	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 4; exon_id "ENSMUSE00001324481.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	exon	88067943	88068009	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 5; exon_id "ENSMUSE00001333377.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	CDS	88067943	88068009	.	+	2	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 5; exon_id "ENSMUSE00001333377.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	exon	88068586	88068620	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 6; exon_id "ENSMUSE00001333815.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	CDS	88068586	88068620	.	+	1	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 6; exon_id "ENSMUSE00001333815.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	exon	88075786	88075903	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 7; exon_id "ENSMUSE00001330569.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	CDS	88075786	88075903	.	+	2	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 7; exon_id "ENSMUSE00001330569.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	exon	88076661	88076760	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 8; exon_id "ENSMUSE00001325973.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	CDS	88076661	88076760	.	+	1	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 8; exon_id "ENSMUSE00001325973.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	exon	88078810	88078908	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 9; exon_id "ENSMUSE00001331904.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	CDS	88078810	88078908	.	+	0	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 9; exon_id "ENSMUSE00001331904.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	exon	88079268	88079494	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 10; exon_id "ENSMUSE00001326373.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	CDS	88079268	88079294	.	+	0	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 10; exon_id "ENSMUSE00001326373.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	stop_codon	88079295	88079297	.	+	0	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 10; exon_id "ENSMUSE00001326373.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	UTR	88053315	88053358	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 1; exon_id "ENSMUSE00001321231.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	UTR	88054724	88054737	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 2; exon_id "ENSMUSE00001333008.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	UTR	88079295	88079494	.	+	.	gene_id "ENSMUSG00000101915.1"; transcript_id "ENSMUST00000187146.1"; gene_type "protein_coding"; gene_name "Gm28102"; transcript_type "protein_coding"; transcript_name "Gm28102-201"; exon_number 10; exon_id "ENSMUSE00001326373.1"; level 2; protein_id "ENSMUSP00000140242.1"; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047149.1"; havana_transcript "OTTMUST00000121980.1";
mm10-chrY	HAVANA	gene	88140408	88141103	.	-	.	gene_id "ENSMUSG00000100746.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28716"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047150.1";
mm10-chrY	HAVANA	transcript	88140408	88141103	.	-	.	gene_id "ENSMUSG00000100746.1"; transcript_id "ENSMUST00000190217.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28716"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28716-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047150.1"; havana_transcript "OTTMUST00000121981.1";
mm10-chrY	HAVANA	exon	88140408	88141103	.	-	.	gene_id "ENSMUSG00000100746.1"; transcript_id "ENSMUST00000190217.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28716"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28716-201"; exon_number 1; exon_id "ENSMUSE00001334847.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047150.1"; havana_transcript "OTTMUST00000121981.1";
mm10-chrY	HAVANA	gene	88177283	88177597	.	-	.	gene_id "ENSMUSG00000099675.1"; gene_type "processed_pseudogene"; gene_name "Gm28717"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047151.1";
mm10-chrY	HAVANA	transcript	88177283	88177597	.	-	.	gene_id "ENSMUSG00000099675.1"; transcript_id "ENSMUST00000189950.1"; gene_type "processed_pseudogene"; gene_name "Gm28717"; transcript_type "processed_pseudogene"; transcript_name "Gm28717-201"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047151.1"; havana_transcript "OTTMUST00000121982.1";
mm10-chrY	HAVANA	exon	88177283	88177597	.	-	.	gene_id "ENSMUSG00000099675.1"; transcript_id "ENSMUST00000189950.1"; gene_type "processed_pseudogene"; gene_name "Gm28717"; transcript_type "processed_pseudogene"; transcript_name "Gm28717-201"; exon_number 1; exon_id "ENSMUSE00001320971.1"; level 1; transcript_support_level "NA"; ont "PGO:0000004"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047151.1"; havana_transcript "OTTMUST00000121982.1";
mm10-chrY	HAVANA	gene	88179006	88182351	.	-	.	gene_id "ENSMUSG00000101770.1"; gene_type "lincRNA"; gene_name "Gm28718"; level 2; havana_gene "OTTMUSG00000047152.1";
mm10-chrY	HAVANA	transcript	88179006	88182351	.	-	.	gene_id "ENSMUSG00000101770.1"; transcript_id "ENSMUST00000188417.1"; gene_type "lincRNA"; gene_name "Gm28718"; transcript_type "lincRNA"; transcript_name "Gm28718-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047152.1"; havana_transcript "OTTMUST00000121983.1";
mm10-chrY	HAVANA	exon	88182129	88182351	.	-	.	gene_id "ENSMUSG00000101770.1"; transcript_id "ENSMUST00000188417.1"; gene_type "lincRNA"; gene_name "Gm28718"; transcript_type "lincRNA"; transcript_name "Gm28718-201"; exon_number 1; exon_id "ENSMUSE00001332099.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047152.1"; havana_transcript "OTTMUST00000121983.1";
mm10-chrY	HAVANA	exon	88179006	88180950	.	-	.	gene_id "ENSMUSG00000101770.1"; transcript_id "ENSMUST00000188417.1"; gene_type "lincRNA"; gene_name "Gm28718"; transcript_type "lincRNA"; transcript_name "Gm28718-201"; exon_number 2; exon_id "ENSMUSE00001326748.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047152.1"; havana_transcript "OTTMUST00000121983.1";
mm10-chrY	HAVANA	gene	88214304	88217542	.	+	.	gene_id "ENSMUSG00000099643.1"; gene_type "lincRNA"; gene_name "Gm29162"; level 2; havana_gene "OTTMUSG00000047187.1";
mm10-chrY	HAVANA	transcript	88214304	88217542	.	+	.	gene_id "ENSMUSG00000099643.1"; transcript_id "ENSMUST00000188893.1"; gene_type "lincRNA"; gene_name "Gm29162"; transcript_type "lincRNA"; transcript_name "Gm29162-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047187.1"; havana_transcript "OTTMUST00000122034.1";
mm10-chrY	HAVANA	exon	88214304	88214943	.	+	.	gene_id "ENSMUSG00000099643.1"; transcript_id "ENSMUST00000188893.1"; gene_type "lincRNA"; gene_name "Gm29162"; transcript_type "lincRNA"; transcript_name "Gm29162-202"; exon_number 1; exon_id "ENSMUSE00001330630.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047187.1"; havana_transcript "OTTMUST00000122034.1";
mm10-chrY	HAVANA	exon	88215429	88215614	.	+	.	gene_id "ENSMUSG00000099643.1"; transcript_id "ENSMUST00000188893.1"; gene_type "lincRNA"; gene_name "Gm29162"; transcript_type "lincRNA"; transcript_name "Gm29162-202"; exon_number 2; exon_id "ENSMUSE00001320199.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047187.1"; havana_transcript "OTTMUST00000122034.1";
mm10-chrY	HAVANA	exon	88216344	88216527	.	+	.	gene_id "ENSMUSG00000099643.1"; transcript_id "ENSMUST00000188893.1"; gene_type "lincRNA"; gene_name "Gm29162"; transcript_type "lincRNA"; transcript_name "Gm29162-202"; exon_number 3; exon_id "ENSMUSE00001322200.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047187.1"; havana_transcript "OTTMUST00000122034.1";
mm10-chrY	HAVANA	exon	88217054	88217542	.	+	.	gene_id "ENSMUSG00000099643.1"; transcript_id "ENSMUST00000188893.1"; gene_type "lincRNA"; gene_name "Gm29162"; transcript_type "lincRNA"; transcript_name "Gm29162-202"; exon_number 4; exon_id "ENSMUSE00001327486.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047187.1"; havana_transcript "OTTMUST00000122034.1";
mm10-chrY	HAVANA	transcript	88214758	88217122	.	+	.	gene_id "ENSMUSG00000099643.1"; transcript_id "ENSMUST00000187723.1"; gene_type "lincRNA"; gene_name "Gm29162"; transcript_type "lincRNA"; transcript_name "Gm29162-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047187.1"; havana_transcript "OTTMUST00000122035.1";
mm10-chrY	HAVANA	exon	88214758	88214943	.	+	.	gene_id "ENSMUSG00000099643.1"; transcript_id "ENSMUST00000187723.1"; gene_type "lincRNA"; gene_name "Gm29162"; transcript_type "lincRNA"; transcript_name "Gm29162-201"; exon_number 1; exon_id "ENSMUSE00001321721.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047187.1"; havana_transcript "OTTMUST00000122035.1";
mm10-chrY	HAVANA	exon	88215433	88215614	.	+	.	gene_id "ENSMUSG00000099643.1"; transcript_id "ENSMUST00000187723.1"; gene_type "lincRNA"; gene_name "Gm29162"; transcript_type "lincRNA"; transcript_name "Gm29162-201"; exon_number 2; exon_id "ENSMUSE00001320174.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047187.1"; havana_transcript "OTTMUST00000122035.1";
mm10-chrY	HAVANA	exon	88217054	88217122	.	+	.	gene_id "ENSMUSG00000099643.1"; transcript_id "ENSMUST00000187723.1"; gene_type "lincRNA"; gene_name "Gm29162"; transcript_type "lincRNA"; transcript_name "Gm29162-201"; exon_number 3; exon_id "ENSMUSE00001320680.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047187.1"; havana_transcript "OTTMUST00000122035.1";
mm10-chrY	HAVANA	gene	88260288	88260983	.	-	.	gene_id "ENSMUSG00000099777.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21777"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047188.1";
mm10-chrY	HAVANA	transcript	88260288	88260983	.	-	.	gene_id "ENSMUSG00000099777.1"; transcript_id "ENSMUST00000189307.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21777"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21777-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047188.1"; havana_transcript "OTTMUST00000122036.1";
mm10-chrY	HAVANA	exon	88260288	88260983	.	-	.	gene_id "ENSMUSG00000099777.1"; transcript_id "ENSMUST00000189307.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21777"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21777-201"; exon_number 1; exon_id "ENSMUSE00001327303.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047188.1"; havana_transcript "OTTMUST00000122036.1";
mm10-chrY	HAVANA	gene	88266844	88270188	.	-	.	gene_id "ENSMUSG00000100930.1"; gene_type "lincRNA"; gene_name "Gm28866"; level 2; havana_gene "OTTMUSG00000047189.1";
mm10-chrY	HAVANA	transcript	88266844	88270188	.	-	.	gene_id "ENSMUSG00000100930.1"; transcript_id "ENSMUST00000187298.1"; gene_type "lincRNA"; gene_name "Gm28866"; transcript_type "lincRNA"; transcript_name "Gm28866-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047189.1"; havana_transcript "OTTMUST00000122037.1";
mm10-chrY	HAVANA	exon	88269966	88270188	.	-	.	gene_id "ENSMUSG00000100930.1"; transcript_id "ENSMUST00000187298.1"; gene_type "lincRNA"; gene_name "Gm28866"; transcript_type "lincRNA"; transcript_name "Gm28866-201"; exon_number 1; exon_id "ENSMUSE00001331147.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047189.1"; havana_transcript "OTTMUST00000122037.1";
mm10-chrY	HAVANA	exon	88266844	88268787	.	-	.	gene_id "ENSMUSG00000100930.1"; transcript_id "ENSMUST00000187298.1"; gene_type "lincRNA"; gene_name "Gm28866"; transcript_type "lincRNA"; transcript_name "Gm28866-201"; exon_number 2; exon_id "ENSMUSE00001330607.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047189.1"; havana_transcript "OTTMUST00000122037.1";
mm10-chrY	HAVANA	gene	88302085	88305320	.	+	.	gene_id "ENSMUSG00000100440.1"; gene_type "lincRNA"; gene_name "Gm28405"; level 2; havana_gene "OTTMUSG00000047190.1";
mm10-chrY	HAVANA	transcript	88302085	88305320	.	+	.	gene_id "ENSMUSG00000100440.1"; transcript_id "ENSMUST00000185222.1"; gene_type "lincRNA"; gene_name "Gm28405"; transcript_type "lincRNA"; transcript_name "Gm28405-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047190.1"; havana_transcript "OTTMUST00000122038.1";
mm10-chrY	HAVANA	exon	88302085	88302723	.	+	.	gene_id "ENSMUSG00000100440.1"; transcript_id "ENSMUST00000185222.1"; gene_type "lincRNA"; gene_name "Gm28405"; transcript_type "lincRNA"; transcript_name "Gm28405-201"; exon_number 1; exon_id "ENSMUSE00001333814.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047190.1"; havana_transcript "OTTMUST00000122038.1";
mm10-chrY	HAVANA	exon	88303209	88303394	.	+	.	gene_id "ENSMUSG00000100440.1"; transcript_id "ENSMUST00000185222.1"; gene_type "lincRNA"; gene_name "Gm28405"; transcript_type "lincRNA"; transcript_name "Gm28405-201"; exon_number 2; exon_id "ENSMUSE00001325697.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047190.1"; havana_transcript "OTTMUST00000122038.1";
mm10-chrY	HAVANA	exon	88304121	88304304	.	+	.	gene_id "ENSMUSG00000100440.1"; transcript_id "ENSMUST00000185222.1"; gene_type "lincRNA"; gene_name "Gm28405"; transcript_type "lincRNA"; transcript_name "Gm28405-201"; exon_number 3; exon_id "ENSMUSE00001335815.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047190.1"; havana_transcript "OTTMUST00000122038.1";
mm10-chrY	HAVANA	exon	88304832	88305320	.	+	.	gene_id "ENSMUSG00000100440.1"; transcript_id "ENSMUST00000185222.1"; gene_type "lincRNA"; gene_name "Gm28405"; transcript_type "lincRNA"; transcript_name "Gm28405-201"; exon_number 4; exon_id "ENSMUSE00001333583.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047190.1"; havana_transcript "OTTMUST00000122038.1";
mm10-chrY	HAVANA	transcript	88302537	88304900	.	+	.	gene_id "ENSMUSG00000100440.1"; transcript_id "ENSMUST00000187915.1"; gene_type "lincRNA"; gene_name "Gm28405"; transcript_type "lincRNA"; transcript_name "Gm28405-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047190.1"; havana_transcript "OTTMUST00000122039.1";
mm10-chrY	HAVANA	exon	88302537	88302723	.	+	.	gene_id "ENSMUSG00000100440.1"; transcript_id "ENSMUST00000187915.1"; gene_type "lincRNA"; gene_name "Gm28405"; transcript_type "lincRNA"; transcript_name "Gm28405-202"; exon_number 1; exon_id "ENSMUSE00001327404.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047190.1"; havana_transcript "OTTMUST00000122039.1";
mm10-chrY	HAVANA	exon	88303213	88303394	.	+	.	gene_id "ENSMUSG00000100440.1"; transcript_id "ENSMUST00000187915.1"; gene_type "lincRNA"; gene_name "Gm28405"; transcript_type "lincRNA"; transcript_name "Gm28405-202"; exon_number 2; exon_id "ENSMUSE00001322617.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047190.1"; havana_transcript "OTTMUST00000122039.1";
mm10-chrY	HAVANA	exon	88304832	88304900	.	+	.	gene_id "ENSMUSG00000100440.1"; transcript_id "ENSMUST00000187915.1"; gene_type "lincRNA"; gene_name "Gm28405"; transcript_type "lincRNA"; transcript_name "Gm28405-202"; exon_number 3; exon_id "ENSMUSE00001322318.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047190.1"; havana_transcript "OTTMUST00000122039.1";
mm10-chrY	HAVANA	gene	88401353	88402048	.	-	.	gene_id "ENSMUSG00000101494.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21792"; level 2; havana_gene "OTTMUSG00000047191.1";
mm10-chrY	HAVANA	transcript	88401353	88402048	.	-	.	gene_id "ENSMUSG00000101494.1"; transcript_id "ENSMUST00000188516.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21792"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21792-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047191.1"; havana_transcript "OTTMUST00000122040.1";
mm10-chrY	HAVANA	exon	88401353	88402048	.	-	.	gene_id "ENSMUSG00000101494.1"; transcript_id "ENSMUST00000188516.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21792"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21792-201"; exon_number 1; exon_id "ENSMUSE00001325432.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047191.1"; havana_transcript "OTTMUST00000122040.1";
mm10-chrY	HAVANA	gene	88418292	88419873	.	+	.	gene_id "ENSMUSG00000099649.1"; gene_type "lincRNA"; gene_name "Gm28406"; level 2; havana_gene "OTTMUSG00000047192.1";
mm10-chrY	HAVANA	transcript	88418292	88419873	.	+	.	gene_id "ENSMUSG00000099649.1"; transcript_id "ENSMUST00000186516.1"; gene_type "lincRNA"; gene_name "Gm28406"; transcript_type "lincRNA"; transcript_name "Gm28406-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047192.1"; havana_transcript "OTTMUST00000122041.1";
mm10-chrY	HAVANA	exon	88418292	88418527	.	+	.	gene_id "ENSMUSG00000099649.1"; transcript_id "ENSMUST00000186516.1"; gene_type "lincRNA"; gene_name "Gm28406"; transcript_type "lincRNA"; transcript_name "Gm28406-201"; exon_number 1; exon_id "ENSMUSE00001325784.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047192.1"; havana_transcript "OTTMUST00000122041.1";
mm10-chrY	HAVANA	exon	88419713	88419873	.	+	.	gene_id "ENSMUSG00000099649.1"; transcript_id "ENSMUST00000186516.1"; gene_type "lincRNA"; gene_name "Gm28406"; transcript_type "lincRNA"; transcript_name "Gm28406-201"; exon_number 2; exon_id "ENSMUSE00001332040.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047192.1"; havana_transcript "OTTMUST00000122041.1";
mm10-chrY	HAVANA	gene	88430978	88431592	.	-	.	gene_id "ENSMUSG00000100391.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28978"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047193.1";
mm10-chrY	HAVANA	transcript	88430978	88431592	.	-	.	gene_id "ENSMUSG00000100391.1"; transcript_id "ENSMUST00000191120.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28978"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28978-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047193.1"; havana_transcript "OTTMUST00000122042.1";
mm10-chrY	HAVANA	exon	88430978	88431592	.	-	.	gene_id "ENSMUSG00000100391.1"; transcript_id "ENSMUST00000191120.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28978"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28978-201"; exon_number 1; exon_id "ENSMUSE00001328742.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047193.1"; havana_transcript "OTTMUST00000122042.1";
mm10-chrY	HAVANA	gene	88474113	88477024	.	+	.	gene_id "ENSMUSG00000101984.1"; gene_type "lincRNA"; gene_name "Gm29436"; level 2; havana_gene "OTTMUSG00000047194.1";
mm10-chrY	HAVANA	transcript	88474113	88477024	.	+	.	gene_id "ENSMUSG00000101984.1"; transcript_id "ENSMUST00000189054.1"; gene_type "lincRNA"; gene_name "Gm29436"; transcript_type "lincRNA"; transcript_name "Gm29436-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047194.1"; havana_transcript "OTTMUST00000122043.1";
mm10-chrY	HAVANA	exon	88474113	88474425	.	+	.	gene_id "ENSMUSG00000101984.1"; transcript_id "ENSMUST00000189054.1"; gene_type "lincRNA"; gene_name "Gm29436"; transcript_type "lincRNA"; transcript_name "Gm29436-202"; exon_number 1; exon_id "ENSMUSE00001330642.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047194.1"; havana_transcript "OTTMUST00000122043.1";
mm10-chrY	HAVANA	exon	88474911	88475096	.	+	.	gene_id "ENSMUSG00000101984.1"; transcript_id "ENSMUST00000189054.1"; gene_type "lincRNA"; gene_name "Gm29436"; transcript_type "lincRNA"; transcript_name "Gm29436-202"; exon_number 2; exon_id "ENSMUSE00001327015.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047194.1"; havana_transcript "OTTMUST00000122043.1";
mm10-chrY	HAVANA	exon	88475826	88476009	.	+	.	gene_id "ENSMUSG00000101984.1"; transcript_id "ENSMUST00000189054.1"; gene_type "lincRNA"; gene_name "Gm29436"; transcript_type "lincRNA"; transcript_name "Gm29436-202"; exon_number 3; exon_id "ENSMUSE00001321059.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047194.1"; havana_transcript "OTTMUST00000122043.1";
mm10-chrY	HAVANA	exon	88476536	88477024	.	+	.	gene_id "ENSMUSG00000101984.1"; transcript_id "ENSMUST00000189054.1"; gene_type "lincRNA"; gene_name "Gm29436"; transcript_type "lincRNA"; transcript_name "Gm29436-202"; exon_number 4; exon_id "ENSMUSE00001333178.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047194.1"; havana_transcript "OTTMUST00000122043.1";
mm10-chrY	HAVANA	transcript	88474240	88476600	.	+	.	gene_id "ENSMUSG00000101984.1"; transcript_id "ENSMUST00000188158.1"; gene_type "lincRNA"; gene_name "Gm29436"; transcript_type "lincRNA"; transcript_name "Gm29436-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047194.1"; havana_transcript "OTTMUST00000122044.1";
mm10-chrY	HAVANA	exon	88474240	88474425	.	+	.	gene_id "ENSMUSG00000101984.1"; transcript_id "ENSMUST00000188158.1"; gene_type "lincRNA"; gene_name "Gm29436"; transcript_type "lincRNA"; transcript_name "Gm29436-201"; exon_number 1; exon_id "ENSMUSE00001332714.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047194.1"; havana_transcript "OTTMUST00000122044.1";
mm10-chrY	HAVANA	exon	88474915	88475096	.	+	.	gene_id "ENSMUSG00000101984.1"; transcript_id "ENSMUST00000188158.1"; gene_type "lincRNA"; gene_name "Gm29436"; transcript_type "lincRNA"; transcript_name "Gm29436-201"; exon_number 2; exon_id "ENSMUSE00001320620.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047194.1"; havana_transcript "OTTMUST00000122044.1";
mm10-chrY	HAVANA	exon	88476536	88476600	.	+	.	gene_id "ENSMUSG00000101984.1"; transcript_id "ENSMUST00000188158.1"; gene_type "lincRNA"; gene_name "Gm29436"; transcript_type "lincRNA"; transcript_name "Gm29436-201"; exon_number 3; exon_id "ENSMUSE00001333519.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047194.1"; havana_transcript "OTTMUST00000122044.1";
mm10-chrY	HAVANA	gene	88534613	88560905	.	+	.	gene_id "ENSMUSG00000100637.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; level 2; havana_gene "OTTMUSG00000047195.1";
mm10-chrY	HAVANA	transcript	88534613	88560905	.	+	.	gene_id "ENSMUSG00000100637.1"; transcript_id "ENSMUST00000191091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20819-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047195.1"; havana_transcript "OTTMUST00000122045.1";
mm10-chrY	HAVANA	exon	88534613	88534656	.	+	.	gene_id "ENSMUSG00000100637.1"; transcript_id "ENSMUST00000191091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20819-201"; exon_number 1; exon_id "ENSMUSE00001332661.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047195.1"; havana_transcript "OTTMUST00000122045.1";
mm10-chrY	HAVANA	exon	88536023	88536154	.	+	.	gene_id "ENSMUSG00000100637.1"; transcript_id "ENSMUST00000191091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20819-201"; exon_number 2; exon_id "ENSMUSE00001324522.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047195.1"; havana_transcript "OTTMUST00000122045.1";
mm10-chrY	HAVANA	exon	88541488	88541554	.	+	.	gene_id "ENSMUSG00000100637.1"; transcript_id "ENSMUST00000191091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20819-201"; exon_number 3; exon_id "ENSMUSE00001318451.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047195.1"; havana_transcript "OTTMUST00000122045.1";
mm10-chrY	HAVANA	exon	88542200	88542234	.	+	.	gene_id "ENSMUSG00000100637.1"; transcript_id "ENSMUST00000191091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20819-201"; exon_number 4; exon_id "ENSMUSE00001329483.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047195.1"; havana_transcript "OTTMUST00000122045.1";
mm10-chrY	HAVANA	exon	88549250	88549316	.	+	.	gene_id "ENSMUSG00000100637.1"; transcript_id "ENSMUST00000191091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20819-201"; exon_number 5; exon_id "ENSMUSE00001335886.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047195.1"; havana_transcript "OTTMUST00000122045.1";
mm10-chrY	HAVANA	exon	88549897	88549931	.	+	.	gene_id "ENSMUSG00000100637.1"; transcript_id "ENSMUST00000191091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20819-201"; exon_number 6; exon_id "ENSMUSE00001323196.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047195.1"; havana_transcript "OTTMUST00000122045.1";
mm10-chrY	HAVANA	exon	88557134	88557251	.	+	.	gene_id "ENSMUSG00000100637.1"; transcript_id "ENSMUST00000191091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20819-201"; exon_number 7; exon_id "ENSMUSE00001326211.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047195.1"; havana_transcript "OTTMUST00000122045.1";
mm10-chrY	HAVANA	exon	88558073	88558172	.	+	.	gene_id "ENSMUSG00000100637.1"; transcript_id "ENSMUST00000191091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20819-201"; exon_number 8; exon_id "ENSMUSE00001332755.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047195.1"; havana_transcript "OTTMUST00000122045.1";
mm10-chrY	HAVANA	exon	88560220	88560318	.	+	.	gene_id "ENSMUSG00000100637.1"; transcript_id "ENSMUST00000191091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20819-201"; exon_number 9; exon_id "ENSMUSE00001324312.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047195.1"; havana_transcript "OTTMUST00000122045.1";
mm10-chrY	HAVANA	exon	88560678	88560905	.	+	.	gene_id "ENSMUSG00000100637.1"; transcript_id "ENSMUST00000191091.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20819"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20819-201"; exon_number 10; exon_id "ENSMUSE00001329740.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047195.1"; havana_transcript "OTTMUST00000122045.1";
mm10-chrY	HAVANA	gene	88621155	88621850	.	-	.	gene_id "ENSMUSG00000101850.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29437"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047196.1";
mm10-chrY	HAVANA	transcript	88621155	88621850	.	-	.	gene_id "ENSMUSG00000101850.1"; transcript_id "ENSMUST00000185865.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29437"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29437-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047196.1"; havana_transcript "OTTMUST00000122046.1";
mm10-chrY	HAVANA	exon	88621155	88621850	.	-	.	gene_id "ENSMUSG00000101850.1"; transcript_id "ENSMUST00000185865.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29437"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29437-201"; exon_number 1; exon_id "ENSMUSE00001334764.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047196.1"; havana_transcript "OTTMUST00000122046.1";
mm10-chrY	HAVANA	gene	88661193	88664536	.	-	.	gene_id "ENSMUSG00000099436.1"; gene_type "lincRNA"; gene_name "Gm28977"; level 2; havana_gene "OTTMUSG00000047197.1";
mm10-chrY	HAVANA	transcript	88661193	88664536	.	-	.	gene_id "ENSMUSG00000099436.1"; transcript_id "ENSMUST00000188678.1"; gene_type "lincRNA"; gene_name "Gm28977"; transcript_type "lincRNA"; transcript_name "Gm28977-201"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000047197.1"; havana_transcript "OTTMUST00000122047.1";
mm10-chrY	HAVANA	exon	88664314	88664536	.	-	.	gene_id "ENSMUSG00000099436.1"; transcript_id "ENSMUST00000188678.1"; gene_type "lincRNA"; gene_name "Gm28977"; transcript_type "lincRNA"; transcript_name "Gm28977-201"; exon_number 1; exon_id "ENSMUSE00001325453.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000047197.1"; havana_transcript "OTTMUST00000122047.1";
mm10-chrY	HAVANA	exon	88661193	88663137	.	-	.	gene_id "ENSMUSG00000099436.1"; transcript_id "ENSMUST00000188678.1"; gene_type "lincRNA"; gene_name "Gm28977"; transcript_type "lincRNA"; transcript_name "Gm28977-201"; exon_number 2; exon_id "ENSMUSE00001321411.1"; level 2; transcript_support_level "1"; tag "basic"; havana_gene "OTTMUSG00000047197.1"; havana_transcript "OTTMUST00000122047.1";
mm10-chrY	HAVANA	gene	88696465	88699701	.	+	.	gene_id "ENSMUSG00000100067.1"; gene_type "lincRNA"; gene_name "Gm28407"; level 2; havana_gene "OTTMUSG00000047198.1";
mm10-chrY	HAVANA	transcript	88696465	88699701	.	+	.	gene_id "ENSMUSG00000100067.1"; transcript_id "ENSMUST00000185630.1"; gene_type "lincRNA"; gene_name "Gm28407"; transcript_type "lincRNA"; transcript_name "Gm28407-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047198.1"; havana_transcript "OTTMUST00000122048.1";
mm10-chrY	HAVANA	exon	88696465	88697102	.	+	.	gene_id "ENSMUSG00000100067.1"; transcript_id "ENSMUST00000185630.1"; gene_type "lincRNA"; gene_name "Gm28407"; transcript_type "lincRNA"; transcript_name "Gm28407-201"; exon_number 1; exon_id "ENSMUSE00001334869.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047198.1"; havana_transcript "OTTMUST00000122048.1";
mm10-chrY	HAVANA	exon	88697588	88697773	.	+	.	gene_id "ENSMUSG00000100067.1"; transcript_id "ENSMUST00000185630.1"; gene_type "lincRNA"; gene_name "Gm28407"; transcript_type "lincRNA"; transcript_name "Gm28407-201"; exon_number 2; exon_id "ENSMUSE00001330586.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047198.1"; havana_transcript "OTTMUST00000122048.1";
mm10-chrY	HAVANA	exon	88698503	88698686	.	+	.	gene_id "ENSMUSG00000100067.1"; transcript_id "ENSMUST00000185630.1"; gene_type "lincRNA"; gene_name "Gm28407"; transcript_type "lincRNA"; transcript_name "Gm28407-201"; exon_number 3; exon_id "ENSMUSE00001325240.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047198.1"; havana_transcript "OTTMUST00000122048.1";
mm10-chrY	HAVANA	exon	88699213	88699701	.	+	.	gene_id "ENSMUSG00000100067.1"; transcript_id "ENSMUST00000185630.1"; gene_type "lincRNA"; gene_name "Gm28407"; transcript_type "lincRNA"; transcript_name "Gm28407-201"; exon_number 4; exon_id "ENSMUSE00001322839.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047198.1"; havana_transcript "OTTMUST00000122048.1";
mm10-chrY	HAVANA	transcript	88696917	88699281	.	+	.	gene_id "ENSMUSG00000100067.1"; transcript_id "ENSMUST00000187247.1"; gene_type "lincRNA"; gene_name "Gm28407"; transcript_type "lincRNA"; transcript_name "Gm28407-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047198.1"; havana_transcript "OTTMUST00000122049.1";
mm10-chrY	HAVANA	exon	88696917	88697102	.	+	.	gene_id "ENSMUSG00000100067.1"; transcript_id "ENSMUST00000187247.1"; gene_type "lincRNA"; gene_name "Gm28407"; transcript_type "lincRNA"; transcript_name "Gm28407-202"; exon_number 1; exon_id "ENSMUSE00001335579.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047198.1"; havana_transcript "OTTMUST00000122049.1";
mm10-chrY	HAVANA	exon	88697592	88697773	.	+	.	gene_id "ENSMUSG00000100067.1"; transcript_id "ENSMUST00000187247.1"; gene_type "lincRNA"; gene_name "Gm28407"; transcript_type "lincRNA"; transcript_name "Gm28407-202"; exon_number 2; exon_id "ENSMUSE00001322925.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047198.1"; havana_transcript "OTTMUST00000122049.1";
mm10-chrY	HAVANA	exon	88699213	88699281	.	+	.	gene_id "ENSMUSG00000100067.1"; transcript_id "ENSMUST00000187247.1"; gene_type "lincRNA"; gene_name "Gm28407"; transcript_type "lincRNA"; transcript_name "Gm28407-202"; exon_number 3; exon_id "ENSMUSE00001335703.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047198.1"; havana_transcript "OTTMUST00000122049.1";
mm10-chrY	HAVANA	gene	88804758	88805453	.	-	.	gene_id "ENSMUSG00000100818.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21287"; level 2; havana_gene "OTTMUSG00000047199.1";
mm10-chrY	HAVANA	transcript	88804758	88805453	.	-	.	gene_id "ENSMUSG00000100818.1"; transcript_id "ENSMUST00000191377.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21287"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21287-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047199.1"; havana_transcript "OTTMUST00000122050.1";
mm10-chrY	HAVANA	exon	88804758	88805453	.	-	.	gene_id "ENSMUSG00000100818.1"; transcript_id "ENSMUST00000191377.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21287"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21287-201"; exon_number 1; exon_id "ENSMUSE00001322066.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047199.1"; havana_transcript "OTTMUST00000122050.1";
mm10-chrY	HAVANA	gene	88885911	88886606	.	-	.	gene_id "ENSMUSG00000099529.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29390"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047200.1";
mm10-chrY	HAVANA	transcript	88885911	88886606	.	-	.	gene_id "ENSMUSG00000099529.1"; transcript_id "ENSMUST00000188709.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29390"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29390-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047200.1"; havana_transcript "OTTMUST00000122051.1";
mm10-chrY	HAVANA	exon	88885911	88886606	.	-	.	gene_id "ENSMUSG00000099529.1"; transcript_id "ENSMUST00000188709.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29390"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29390-201"; exon_number 1; exon_id "ENSMUSE00001318060.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047200.1"; havana_transcript "OTTMUST00000122051.1";
mm10-chrY	HAVANA	gene	88915556	88916170	.	-	.	gene_id "ENSMUSG00000101497.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29391"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047201.1";
mm10-chrY	HAVANA	transcript	88915556	88916170	.	-	.	gene_id "ENSMUSG00000101497.1"; transcript_id "ENSMUST00000188545.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29391"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29391-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047201.1"; havana_transcript "OTTMUST00000122052.1";
mm10-chrY	HAVANA	exon	88915556	88916170	.	-	.	gene_id "ENSMUSG00000101497.1"; transcript_id "ENSMUST00000188545.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29391"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29391-201"; exon_number 1; exon_id "ENSMUSE00001329394.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047201.1"; havana_transcript "OTTMUST00000122052.1";
mm10-chrY	HAVANA	gene	88952366	88953061	.	-	.	gene_id "ENSMUSG00000100870.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21720"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047202.1";
mm10-chrY	HAVANA	transcript	88952366	88953061	.	-	.	gene_id "ENSMUSG00000100870.1"; transcript_id "ENSMUST00000187428.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21720"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21720-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047202.1"; havana_transcript "OTTMUST00000122053.1";
mm10-chrY	HAVANA	exon	88952366	88953061	.	-	.	gene_id "ENSMUSG00000100870.1"; transcript_id "ENSMUST00000187428.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21720"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21720-201"; exon_number 1; exon_id "ENSMUSE00001322007.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047202.1"; havana_transcript "OTTMUST00000122053.1";
mm10-chrY	HAVANA	gene	88959176	88962524	.	-	.	gene_id "ENSMUSG00000101694.1"; gene_type "lincRNA"; gene_name "Gm29392"; level 2; havana_gene "OTTMUSG00000047203.1";
mm10-chrY	HAVANA	transcript	88959176	88962524	.	-	.	gene_id "ENSMUSG00000101694.1"; transcript_id "ENSMUST00000189429.1"; gene_type "lincRNA"; gene_name "Gm29392"; transcript_type "lincRNA"; transcript_name "Gm29392-201"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047203.1"; havana_transcript "OTTMUST00000122054.1";
mm10-chrY	HAVANA	exon	88962302	88962524	.	-	.	gene_id "ENSMUSG00000101694.1"; transcript_id "ENSMUST00000189429.1"; gene_type "lincRNA"; gene_name "Gm29392"; transcript_type "lincRNA"; transcript_name "Gm29392-201"; exon_number 1; exon_id "ENSMUSE00001319199.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047203.1"; havana_transcript "OTTMUST00000122054.1";
mm10-chrY	HAVANA	exon	88959176	88961119	.	-	.	gene_id "ENSMUSG00000101694.1"; transcript_id "ENSMUST00000189429.1"; gene_type "lincRNA"; gene_name "Gm29392"; transcript_type "lincRNA"; transcript_name "Gm29392-201"; exon_number 2; exon_id "ENSMUSE00001320784.1"; level 2; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047203.1"; havana_transcript "OTTMUST00000122054.1";
mm10-chrY	HAVANA	gene	88994450	88997689	.	+	.	gene_id "ENSMUSG00000101533.1"; gene_type "lincRNA"; gene_name "Gm29393"; level 2; havana_gene "OTTMUSG00000047204.1";
mm10-chrY	HAVANA	transcript	88994450	88997689	.	+	.	gene_id "ENSMUSG00000101533.1"; transcript_id "ENSMUST00000187002.1"; gene_type "lincRNA"; gene_name "Gm29393"; transcript_type "lincRNA"; transcript_name "Gm29393-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047204.1"; havana_transcript "OTTMUST00000122055.1";
mm10-chrY	HAVANA	exon	88994450	88995089	.	+	.	gene_id "ENSMUSG00000101533.1"; transcript_id "ENSMUST00000187002.1"; gene_type "lincRNA"; gene_name "Gm29393"; transcript_type "lincRNA"; transcript_name "Gm29393-201"; exon_number 1; exon_id "ENSMUSE00001336020.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047204.1"; havana_transcript "OTTMUST00000122055.1";
mm10-chrY	HAVANA	exon	88995575	88995760	.	+	.	gene_id "ENSMUSG00000101533.1"; transcript_id "ENSMUST00000187002.1"; gene_type "lincRNA"; gene_name "Gm29393"; transcript_type "lincRNA"; transcript_name "Gm29393-201"; exon_number 2; exon_id "ENSMUSE00001332362.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047204.1"; havana_transcript "OTTMUST00000122055.1";
mm10-chrY	HAVANA	exon	88996490	88996673	.	+	.	gene_id "ENSMUSG00000101533.1"; transcript_id "ENSMUST00000187002.1"; gene_type "lincRNA"; gene_name "Gm29393"; transcript_type "lincRNA"; transcript_name "Gm29393-201"; exon_number 3; exon_id "ENSMUSE00001329218.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047204.1"; havana_transcript "OTTMUST00000122055.1";
mm10-chrY	HAVANA	exon	88997201	88997689	.	+	.	gene_id "ENSMUSG00000101533.1"; transcript_id "ENSMUST00000187002.1"; gene_type "lincRNA"; gene_name "Gm29393"; transcript_type "lincRNA"; transcript_name "Gm29393-201"; exon_number 4; exon_id "ENSMUSE00001321128.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047204.1"; havana_transcript "OTTMUST00000122055.1";
mm10-chrY	HAVANA	transcript	88994903	88997269	.	+	.	gene_id "ENSMUSG00000101533.1"; transcript_id "ENSMUST00000190267.1"; gene_type "lincRNA"; gene_name "Gm29393"; transcript_type "lincRNA"; transcript_name "Gm29393-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047204.1"; havana_transcript "OTTMUST00000122056.1";
mm10-chrY	HAVANA	exon	88994903	88995089	.	+	.	gene_id "ENSMUSG00000101533.1"; transcript_id "ENSMUST00000190267.1"; gene_type "lincRNA"; gene_name "Gm29393"; transcript_type "lincRNA"; transcript_name "Gm29393-202"; exon_number 1; exon_id "ENSMUSE00001325937.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047204.1"; havana_transcript "OTTMUST00000122056.1";
mm10-chrY	HAVANA	exon	88995579	88995760	.	+	.	gene_id "ENSMUSG00000101533.1"; transcript_id "ENSMUST00000190267.1"; gene_type "lincRNA"; gene_name "Gm29393"; transcript_type "lincRNA"; transcript_name "Gm29393-202"; exon_number 2; exon_id "ENSMUSE00001326727.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047204.1"; havana_transcript "OTTMUST00000122056.1";
mm10-chrY	HAVANA	exon	88997201	88997269	.	+	.	gene_id "ENSMUSG00000101533.1"; transcript_id "ENSMUST00000190267.1"; gene_type "lincRNA"; gene_name "Gm29393"; transcript_type "lincRNA"; transcript_name "Gm29393-202"; exon_number 3; exon_id "ENSMUSE00001334655.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047204.1"; havana_transcript "OTTMUST00000122056.1";
mm10-chrY	HAVANA	gene	89052806	89079015	.	+	.	gene_id "ENSMUSG00000102045.1"; gene_type "protein_coding"; gene_name "Gm21294"; level 2; havana_gene "OTTMUSG00000047309.1";
mm10-chrY	HAVANA	transcript	89052806	89079015	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	exon	89052806	89052861	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 1; exon_id "ENSMUSE00001331337.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	exon	89054227	89054361	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 2; exon_id "ENSMUSE00001321305.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	CDS	89054244	89054361	.	+	0	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 2; exon_id "ENSMUSE00001321305.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	start_codon	89054244	89054246	.	+	0	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 2; exon_id "ENSMUSE00001321305.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	exon	89059690	89059756	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 3; exon_id "ENSMUSE00001323056.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	CDS	89059690	89059756	.	+	2	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 3; exon_id "ENSMUSE00001323056.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	exon	89060410	89060444	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 4; exon_id "ENSMUSE00001330598.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	CDS	89060410	89060444	.	+	1	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 4; exon_id "ENSMUSE00001330598.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	exon	89067479	89067545	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 5; exon_id "ENSMUSE00001332636.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	CDS	89067479	89067545	.	+	2	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 5; exon_id "ENSMUSE00001332636.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	exon	89068127	89068161	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 6; exon_id "ENSMUSE00001326093.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	CDS	89068127	89068161	.	+	1	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 6; exon_id "ENSMUSE00001326093.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	exon	89075320	89075437	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 7; exon_id "ENSMUSE00001320084.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	CDS	89075320	89075437	.	+	2	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 7; exon_id "ENSMUSE00001320084.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	exon	89076196	89076295	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 8; exon_id "ENSMUSE00001333752.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	CDS	89076196	89076295	.	+	1	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 8; exon_id "ENSMUSE00001333752.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	exon	89078336	89078434	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 9; exon_id "ENSMUSE00001326434.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	CDS	89078336	89078434	.	+	0	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 9; exon_id "ENSMUSE00001326434.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	exon	89078794	89079015	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 10; exon_id "ENSMUSE00001322637.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	CDS	89078794	89078820	.	+	0	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 10; exon_id "ENSMUSE00001322637.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	stop_codon	89078821	89078823	.	+	0	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 10; exon_id "ENSMUSE00001322637.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	UTR	89052806	89052861	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 1; exon_id "ENSMUSE00001331337.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	UTR	89054227	89054243	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 2; exon_id "ENSMUSE00001321305.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	UTR	89078821	89079015	.	+	.	gene_id "ENSMUSG00000102045.1"; transcript_id "ENSMUST00000186443.1"; gene_type "protein_coding"; gene_name "Gm21294"; transcript_type "protein_coding"; transcript_name "Gm21294-201"; exon_number 10; exon_id "ENSMUSE00001322637.1"; level 2; protein_id "ENSMUSP00000140933.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047309.1"; havana_transcript "OTTMUST00000122306.1";
mm10-chrY	HAVANA	gene	89222067	89225296	.	+	.	gene_id "ENSMUSG00000100492.1"; gene_type "lincRNA"; gene_name "Gm28672"; level 2; havana_gene "OTTMUSG00000047310.1";
mm10-chrY	HAVANA	transcript	89222067	89225296	.	+	.	gene_id "ENSMUSG00000100492.1"; transcript_id "ENSMUST00000188727.1"; gene_type "lincRNA"; gene_name "Gm28672"; transcript_type "lincRNA"; transcript_name "Gm28672-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047310.1"; havana_transcript "OTTMUST00000122307.1";
mm10-chrY	HAVANA	exon	89222067	89222705	.	+	.	gene_id "ENSMUSG00000100492.1"; transcript_id "ENSMUST00000188727.1"; gene_type "lincRNA"; gene_name "Gm28672"; transcript_type "lincRNA"; transcript_name "Gm28672-201"; exon_number 1; exon_id "ENSMUSE00001318160.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047310.1"; havana_transcript "OTTMUST00000122307.1";
mm10-chrY	HAVANA	exon	89223191	89223376	.	+	.	gene_id "ENSMUSG00000100492.1"; transcript_id "ENSMUST00000188727.1"; gene_type "lincRNA"; gene_name "Gm28672"; transcript_type "lincRNA"; transcript_name "Gm28672-201"; exon_number 2; exon_id "ENSMUSE00001331556.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047310.1"; havana_transcript "OTTMUST00000122307.1";
mm10-chrY	HAVANA	exon	89224106	89224289	.	+	.	gene_id "ENSMUSG00000100492.1"; transcript_id "ENSMUST00000188727.1"; gene_type "lincRNA"; gene_name "Gm28672"; transcript_type "lincRNA"; transcript_name "Gm28672-201"; exon_number 3; exon_id "ENSMUSE00001325588.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047310.1"; havana_transcript "OTTMUST00000122307.1";
mm10-chrY	HAVANA	exon	89224816	89225296	.	+	.	gene_id "ENSMUSG00000100492.1"; transcript_id "ENSMUST00000188727.1"; gene_type "lincRNA"; gene_name "Gm28672"; transcript_type "lincRNA"; transcript_name "Gm28672-201"; exon_number 4; exon_id "ENSMUSE00001334011.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047310.1"; havana_transcript "OTTMUST00000122307.1";
mm10-chrY	HAVANA	transcript	89222520	89224884	.	+	.	gene_id "ENSMUSG00000100492.1"; transcript_id "ENSMUST00000190816.1"; gene_type "lincRNA"; gene_name "Gm28672"; transcript_type "lincRNA"; transcript_name "Gm28672-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047310.1"; havana_transcript "OTTMUST00000122308.1";
mm10-chrY	HAVANA	exon	89222520	89222705	.	+	.	gene_id "ENSMUSG00000100492.1"; transcript_id "ENSMUST00000190816.1"; gene_type "lincRNA"; gene_name "Gm28672"; transcript_type "lincRNA"; transcript_name "Gm28672-202"; exon_number 1; exon_id "ENSMUSE00001333016.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047310.1"; havana_transcript "OTTMUST00000122308.1";
mm10-chrY	HAVANA	exon	89223195	89223376	.	+	.	gene_id "ENSMUSG00000100492.1"; transcript_id "ENSMUST00000190816.1"; gene_type "lincRNA"; gene_name "Gm28672"; transcript_type "lincRNA"; transcript_name "Gm28672-202"; exon_number 2; exon_id "ENSMUSE00001333719.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047310.1"; havana_transcript "OTTMUST00000122308.1";
mm10-chrY	HAVANA	exon	89224816	89224884	.	+	.	gene_id "ENSMUSG00000100492.1"; transcript_id "ENSMUST00000190816.1"; gene_type "lincRNA"; gene_name "Gm28672"; transcript_type "lincRNA"; transcript_name "Gm28672-202"; exon_number 3; exon_id "ENSMUSE00001333187.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047310.1"; havana_transcript "OTTMUST00000122308.1";
mm10-chrY	HAVANA	gene	89328773	89329468	.	-	.	gene_id "ENSMUSG00000100403.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21838"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047311.1";
mm10-chrY	HAVANA	transcript	89328773	89329468	.	-	.	gene_id "ENSMUSG00000100403.1"; transcript_id "ENSMUST00000190955.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21838"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21838-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047311.1"; havana_transcript "OTTMUST00000122309.1";
mm10-chrY	HAVANA	exon	89328773	89329468	.	-	.	gene_id "ENSMUSG00000100403.1"; transcript_id "ENSMUST00000190955.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21838"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21838-201"; exon_number 1; exon_id "ENSMUSE00001323699.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047311.1"; havana_transcript "OTTMUST00000122309.1";
mm10-chrY	HAVANA	gene	89391528	89394761	.	+	.	gene_id "ENSMUSG00000099982.1"; gene_type "lincRNA"; gene_name "Gm28670"; level 2; havana_gene "OTTMUSG00000047312.1";
mm10-chrY	HAVANA	transcript	89391528	89394761	.	+	.	gene_id "ENSMUSG00000099982.1"; transcript_id "ENSMUST00000185365.1"; gene_type "lincRNA"; gene_name "Gm28670"; transcript_type "lincRNA"; transcript_name "Gm28670-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047312.1"; havana_transcript "OTTMUST00000122310.1";
mm10-chrY	HAVANA	exon	89391528	89392166	.	+	.	gene_id "ENSMUSG00000099982.1"; transcript_id "ENSMUST00000185365.1"; gene_type "lincRNA"; gene_name "Gm28670"; transcript_type "lincRNA"; transcript_name "Gm28670-201"; exon_number 1; exon_id "ENSMUSE00001322773.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047312.1"; havana_transcript "OTTMUST00000122310.1";
mm10-chrY	HAVANA	exon	89392650	89392835	.	+	.	gene_id "ENSMUSG00000099982.1"; transcript_id "ENSMUST00000185365.1"; gene_type "lincRNA"; gene_name "Gm28670"; transcript_type "lincRNA"; transcript_name "Gm28670-201"; exon_number 2; exon_id "ENSMUSE00001325088.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047312.1"; havana_transcript "OTTMUST00000122310.1";
mm10-chrY	HAVANA	exon	89393562	89393745	.	+	.	gene_id "ENSMUSG00000099982.1"; transcript_id "ENSMUST00000185365.1"; gene_type "lincRNA"; gene_name "Gm28670"; transcript_type "lincRNA"; transcript_name "Gm28670-201"; exon_number 3; exon_id "ENSMUSE00001331352.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047312.1"; havana_transcript "OTTMUST00000122310.1";
mm10-chrY	HAVANA	exon	89394273	89394761	.	+	.	gene_id "ENSMUSG00000099982.1"; transcript_id "ENSMUST00000185365.1"; gene_type "lincRNA"; gene_name "Gm28670"; transcript_type "lincRNA"; transcript_name "Gm28670-201"; exon_number 4; exon_id "ENSMUSE00001329922.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047312.1"; havana_transcript "OTTMUST00000122310.1";
mm10-chrY	HAVANA	transcript	89391981	89394341	.	+	.	gene_id "ENSMUSG00000099982.1"; transcript_id "ENSMUST00000188456.1"; gene_type "lincRNA"; gene_name "Gm28670"; transcript_type "lincRNA"; transcript_name "Gm28670-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047312.1"; havana_transcript "OTTMUST00000122311.1";
mm10-chrY	HAVANA	exon	89391981	89392166	.	+	.	gene_id "ENSMUSG00000099982.1"; transcript_id "ENSMUST00000188456.1"; gene_type "lincRNA"; gene_name "Gm28670"; transcript_type "lincRNA"; transcript_name "Gm28670-202"; exon_number 1; exon_id "ENSMUSE00001331892.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047312.1"; havana_transcript "OTTMUST00000122311.1";
mm10-chrY	HAVANA	exon	89392654	89392835	.	+	.	gene_id "ENSMUSG00000099982.1"; transcript_id "ENSMUST00000188456.1"; gene_type "lincRNA"; gene_name "Gm28670"; transcript_type "lincRNA"; transcript_name "Gm28670-202"; exon_number 2; exon_id "ENSMUSE00001334447.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047312.1"; havana_transcript "OTTMUST00000122311.1";
mm10-chrY	HAVANA	exon	89394273	89394341	.	+	.	gene_id "ENSMUSG00000099982.1"; transcript_id "ENSMUST00000188456.1"; gene_type "lincRNA"; gene_name "Gm28670"; transcript_type "lincRNA"; transcript_name "Gm28670-202"; exon_number 3; exon_id "ENSMUSE00001331957.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047312.1"; havana_transcript "OTTMUST00000122311.1";
mm10-chrY	HAVANA	gene	89473657	89474348	.	-	.	gene_id "ENSMUSG00000100036.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28671"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047313.1";
mm10-chrY	HAVANA	transcript	89473657	89474348	.	-	.	gene_id "ENSMUSG00000100036.1"; transcript_id "ENSMUST00000187036.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28671"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28671-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047313.1"; havana_transcript "OTTMUST00000122312.1";
mm10-chrY	HAVANA	exon	89473657	89474348	.	-	.	gene_id "ENSMUSG00000100036.1"; transcript_id "ENSMUST00000187036.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28671"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28671-201"; exon_number 1; exon_id "ENSMUSE00001325329.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047313.1"; havana_transcript "OTTMUST00000122312.1";
mm10-chrY	HAVANA	gene	89607659	89610894	.	-	.	gene_id "ENSMUSG00000101402.1"; gene_type "lincRNA"; gene_name "Gm28673"; level 2; havana_gene "OTTMUSG00000047314.1";
mm10-chrY	HAVANA	transcript	89607659	89610894	.	-	.	gene_id "ENSMUSG00000101402.1"; transcript_id "ENSMUST00000186562.1"; gene_type "lincRNA"; gene_name "Gm28673"; transcript_type "lincRNA"; transcript_name "Gm28673-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047314.1"; havana_transcript "OTTMUST00000122313.1";
mm10-chrY	HAVANA	exon	89610256	89610894	.	-	.	gene_id "ENSMUSG00000101402.1"; transcript_id "ENSMUST00000186562.1"; gene_type "lincRNA"; gene_name "Gm28673"; transcript_type "lincRNA"; transcript_name "Gm28673-201"; exon_number 1; exon_id "ENSMUSE00001327420.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047314.1"; havana_transcript "OTTMUST00000122313.1";
mm10-chrY	HAVANA	exon	89609587	89609772	.	-	.	gene_id "ENSMUSG00000101402.1"; transcript_id "ENSMUST00000186562.1"; gene_type "lincRNA"; gene_name "Gm28673"; transcript_type "lincRNA"; transcript_name "Gm28673-201"; exon_number 2; exon_id "ENSMUSE00001330967.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047314.1"; havana_transcript "OTTMUST00000122313.1";
mm10-chrY	HAVANA	exon	89608676	89608859	.	-	.	gene_id "ENSMUSG00000101402.1"; transcript_id "ENSMUST00000186562.1"; gene_type "lincRNA"; gene_name "Gm28673"; transcript_type "lincRNA"; transcript_name "Gm28673-201"; exon_number 3; exon_id "ENSMUSE00001333318.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047314.1"; havana_transcript "OTTMUST00000122313.1";
mm10-chrY	HAVANA	exon	89607659	89608147	.	-	.	gene_id "ENSMUSG00000101402.1"; transcript_id "ENSMUST00000186562.1"; gene_type "lincRNA"; gene_name "Gm28673"; transcript_type "lincRNA"; transcript_name "Gm28673-201"; exon_number 4; exon_id "ENSMUSE00001331636.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047314.1"; havana_transcript "OTTMUST00000122313.1";
mm10-chrY	HAVANA	transcript	89608079	89610441	.	-	.	gene_id "ENSMUSG00000101402.1"; transcript_id "ENSMUST00000187708.1"; gene_type "lincRNA"; gene_name "Gm28673"; transcript_type "lincRNA"; transcript_name "Gm28673-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047314.1"; havana_transcript "OTTMUST00000122314.1";
mm10-chrY	HAVANA	exon	89610256	89610441	.	-	.	gene_id "ENSMUSG00000101402.1"; transcript_id "ENSMUST00000187708.1"; gene_type "lincRNA"; gene_name "Gm28673"; transcript_type "lincRNA"; transcript_name "Gm28673-202"; exon_number 1; exon_id "ENSMUSE00001327021.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047314.1"; havana_transcript "OTTMUST00000122314.1";
mm10-chrY	HAVANA	exon	89609587	89609768	.	-	.	gene_id "ENSMUSG00000101402.1"; transcript_id "ENSMUST00000187708.1"; gene_type "lincRNA"; gene_name "Gm28673"; transcript_type "lincRNA"; transcript_name "Gm28673-202"; exon_number 2; exon_id "ENSMUSE00001330544.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047314.1"; havana_transcript "OTTMUST00000122314.1";
mm10-chrY	HAVANA	exon	89608079	89608147	.	-	.	gene_id "ENSMUSG00000101402.1"; transcript_id "ENSMUST00000187708.1"; gene_type "lincRNA"; gene_name "Gm28673"; transcript_type "lincRNA"; transcript_name "Gm28673-202"; exon_number 3; exon_id "ENSMUSE00001318940.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047314.1"; havana_transcript "OTTMUST00000122314.1";
mm10-chrY	HAVANA	gene	89636206	89639438	.	-	.	gene_id "ENSMUSG00000100574.1"; gene_type "lincRNA"; gene_name "Gm28674"; level 2; havana_gene "OTTMUSG00000047315.1";
mm10-chrY	HAVANA	transcript	89636206	89639438	.	-	.	gene_id "ENSMUSG00000100574.1"; transcript_id "ENSMUST00000187502.1"; gene_type "lincRNA"; gene_name "Gm28674"; transcript_type "lincRNA"; transcript_name "Gm28674-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047315.1"; havana_transcript "OTTMUST00000122315.1";
mm10-chrY	HAVANA	exon	89638800	89639438	.	-	.	gene_id "ENSMUSG00000100574.1"; transcript_id "ENSMUST00000187502.1"; gene_type "lincRNA"; gene_name "Gm28674"; transcript_type "lincRNA"; transcript_name "Gm28674-201"; exon_number 1; exon_id "ENSMUSE00001319736.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047315.1"; havana_transcript "OTTMUST00000122315.1";
mm10-chrY	HAVANA	exon	89638133	89638315	.	-	.	gene_id "ENSMUSG00000100574.1"; transcript_id "ENSMUST00000187502.1"; gene_type "lincRNA"; gene_name "Gm28674"; transcript_type "lincRNA"; transcript_name "Gm28674-201"; exon_number 2; exon_id "ENSMUSE00001328680.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047315.1"; havana_transcript "OTTMUST00000122315.1";
mm10-chrY	HAVANA	exon	89637223	89637403	.	-	.	gene_id "ENSMUSG00000100574.1"; transcript_id "ENSMUST00000187502.1"; gene_type "lincRNA"; gene_name "Gm28674"; transcript_type "lincRNA"; transcript_name "Gm28674-201"; exon_number 3; exon_id "ENSMUSE00001333507.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047315.1"; havana_transcript "OTTMUST00000122315.1";
mm10-chrY	HAVANA	exon	89636206	89636695	.	-	.	gene_id "ENSMUSG00000100574.1"; transcript_id "ENSMUST00000187502.1"; gene_type "lincRNA"; gene_name "Gm28674"; transcript_type "lincRNA"; transcript_name "Gm28674-201"; exon_number 4; exon_id "ENSMUSE00001320851.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047315.1"; havana_transcript "OTTMUST00000122315.1";
mm10-chrY	HAVANA	transcript	89636631	89638985	.	-	.	gene_id "ENSMUSG00000100574.1"; transcript_id "ENSMUST00000191175.1"; gene_type "lincRNA"; gene_name "Gm28674"; transcript_type "lincRNA"; transcript_name "Gm28674-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047315.1"; havana_transcript "OTTMUST00000122316.1";
mm10-chrY	HAVANA	exon	89638800	89638985	.	-	.	gene_id "ENSMUSG00000100574.1"; transcript_id "ENSMUST00000191175.1"; gene_type "lincRNA"; gene_name "Gm28674"; transcript_type "lincRNA"; transcript_name "Gm28674-202"; exon_number 1; exon_id "ENSMUSE00001329886.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047315.1"; havana_transcript "OTTMUST00000122316.1";
mm10-chrY	HAVANA	exon	89638133	89638311	.	-	.	gene_id "ENSMUSG00000100574.1"; transcript_id "ENSMUST00000191175.1"; gene_type "lincRNA"; gene_name "Gm28674"; transcript_type "lincRNA"; transcript_name "Gm28674-202"; exon_number 2; exon_id "ENSMUSE00001333646.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047315.1"; havana_transcript "OTTMUST00000122316.1";
mm10-chrY	HAVANA	exon	89636631	89636695	.	-	.	gene_id "ENSMUSG00000100574.1"; transcript_id "ENSMUST00000191175.1"; gene_type "lincRNA"; gene_name "Gm28674"; transcript_type "lincRNA"; transcript_name "Gm28674-202"; exon_number 3; exon_id "ENSMUSE00001323958.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047315.1"; havana_transcript "OTTMUST00000122316.1";
mm10-chrY	HAVANA	gene	89656606	89657301	.	+	.	gene_id "ENSMUSG00000100330.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28531"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000045360.2";
mm10-chrY	HAVANA	transcript	89656606	89657301	.	+	.	gene_id "ENSMUSG00000100330.1"; transcript_id "ENSMUST00000190529.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28531"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28531-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045360.2"; havana_transcript "OTTMUST00000122317.1";
mm10-chrY	HAVANA	exon	89656606	89657301	.	+	.	gene_id "ENSMUSG00000100330.1"; transcript_id "ENSMUST00000190529.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm28531"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm28531-201"; exon_number 1; exon_id "ENSMUSE00001326752.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000045360.2"; havana_transcript "OTTMUST00000122317.1";
mm10-chrY	HAVANA	gene	89713424	89745532	.	-	.	gene_id "ENSMUSG00000100608.1"; gene_type "protein_coding"; gene_name "Gm21996"; level 2; havana_gene "OTTMUSG00000047316.1";
mm10-chrY	HAVANA	transcript	89713424	89745532	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	exon	89745489	89745532	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 1; exon_id "ENSMUSE00001319791.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	exon	89743994	89744125	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 2; exon_id "ENSMUSE00001332880.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	CDS	89743994	89744111	.	-	0	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 2; exon_id "ENSMUSE00001332880.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	start_codon	89744109	89744111	.	-	0	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 2; exon_id "ENSMUSE00001332880.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	exon	89732606	89732672	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 3; exon_id "ENSMUSE00001331494.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	CDS	89732606	89732672	.	-	2	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 3; exon_id "ENSMUSE00001331494.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	exon	89731937	89731971	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 4; exon_id "ENSMUSE00001333847.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	CDS	89731937	89731971	.	-	1	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 4; exon_id "ENSMUSE00001333847.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	exon	89724834	89724900	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 5; exon_id "ENSMUSE00001325561.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	CDS	89724834	89724900	.	-	2	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 5; exon_id "ENSMUSE00001325561.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	exon	89724234	89724268	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 6; exon_id "ENSMUSE00001334795.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	CDS	89724234	89724268	.	-	1	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 6; exon_id "ENSMUSE00001334795.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	exon	89716976	89717093	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 7; exon_id "ENSMUSE00001323134.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	CDS	89716976	89717093	.	-	2	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 7; exon_id "ENSMUSE00001323134.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	exon	89716124	89716223	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 8; exon_id "ENSMUSE00001318382.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	CDS	89716124	89716223	.	-	1	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 8; exon_id "ENSMUSE00001318382.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	exon	89714016	89714114	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 9; exon_id "ENSMUSE00001324908.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	CDS	89714016	89714114	.	-	0	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 9; exon_id "ENSMUSE00001324908.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	exon	89713424	89713657	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 10; exon_id "ENSMUSE00001326772.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	CDS	89713631	89713657	.	-	0	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 10; exon_id "ENSMUSE00001326772.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	stop_codon	89713628	89713630	.	-	0	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 10; exon_id "ENSMUSE00001326772.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	UTR	89745489	89745532	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 1; exon_id "ENSMUSE00001319791.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	UTR	89744112	89744125	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 2; exon_id "ENSMUSE00001332880.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	UTR	89713424	89713630	.	-	.	gene_id "ENSMUSG00000100608.1"; transcript_id "ENSMUST00000188269.1"; gene_type "protein_coding"; gene_name "Gm21996"; transcript_type "protein_coding"; transcript_name "Gm21996-201"; exon_number 10; exon_id "ENSMUSE00001326772.1"; level 2; protein_id "ENSMUSP00000141173.1"; transcript_support_level "1"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047316.1"; havana_transcript "OTTMUST00000122318.1";
mm10-chrY	HAVANA	gene	89846231	89846923	.	+	.	gene_id "ENSMUSG00000100270.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21803"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047348.1";
mm10-chrY	HAVANA	transcript	89846231	89846923	.	+	.	gene_id "ENSMUSG00000100270.1"; transcript_id "ENSMUST00000188897.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21803"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21803-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047348.1"; havana_transcript "OTTMUST00000122356.1";
mm10-chrY	HAVANA	exon	89846231	89846923	.	+	.	gene_id "ENSMUSG00000100270.1"; transcript_id "ENSMUST00000188897.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21803"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21803-201"; exon_number 1; exon_id "ENSMUSE00001326598.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047348.1"; havana_transcript "OTTMUST00000122356.1";
mm10-chrY	HAVANA	gene	89927120	89935013	.	-	.	gene_id "ENSMUSG00000102011.1"; gene_type "lincRNA"; gene_name "Gm28930"; level 2; havana_gene "OTTMUSG00000047349.1";
mm10-chrY	HAVANA	transcript	89927120	89935013	.	-	.	gene_id "ENSMUSG00000102011.1"; transcript_id "ENSMUST00000189525.1"; gene_type "lincRNA"; gene_name "Gm28930"; transcript_type "lincRNA"; transcript_name "Gm28930-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047349.1"; havana_transcript "OTTMUST00000122357.1";
mm10-chrY	HAVANA	exon	89934828	89935013	.	-	.	gene_id "ENSMUSG00000102011.1"; transcript_id "ENSMUST00000189525.1"; gene_type "lincRNA"; gene_name "Gm28930"; transcript_type "lincRNA"; transcript_name "Gm28930-201"; exon_number 1; exon_id "ENSMUSE00001322936.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047349.1"; havana_transcript "OTTMUST00000122357.1";
mm10-chrY	HAVANA	exon	89934159	89934340	.	-	.	gene_id "ENSMUSG00000102011.1"; transcript_id "ENSMUST00000189525.1"; gene_type "lincRNA"; gene_name "Gm28930"; transcript_type "lincRNA"; transcript_name "Gm28930-201"; exon_number 2; exon_id "ENSMUSE00001330482.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047349.1"; havana_transcript "OTTMUST00000122357.1";
mm10-chrY	HAVANA	exon	89927120	89927188	.	-	.	gene_id "ENSMUSG00000102011.1"; transcript_id "ENSMUST00000189525.1"; gene_type "lincRNA"; gene_name "Gm28930"; transcript_type "lincRNA"; transcript_name "Gm28930-201"; exon_number 3; exon_id "ENSMUSE00001328485.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047349.1"; havana_transcript "OTTMUST00000122357.1";
mm10-chrY	HAVANA	gene	89999717	90000411	.	+	.	gene_id "ENSMUSG00000100246.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20879"; level 1; tag "pseudo_consens"; havana_gene "OTTMUSG00000047350.1";
mm10-chrY	HAVANA	transcript	89999717	90000411	.	+	.	gene_id "ENSMUSG00000100246.1"; transcript_id "ENSMUST00000188719.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20879"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20879-201"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047350.1"; havana_transcript "OTTMUST00000122358.1";
mm10-chrY	HAVANA	exon	89999717	90000411	.	+	.	gene_id "ENSMUSG00000100246.1"; transcript_id "ENSMUST00000188719.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm20879"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm20879-201"; exon_number 1; exon_id "ENSMUSE00001323149.1"; level 1; transcript_support_level "NA"; ont "PGO:0000005"; tag "pseudo_consens"; tag "basic"; havana_gene "OTTMUSG00000047350.1"; havana_transcript "OTTMUST00000122358.1";
mm10-chrY	HAVANA	gene	90275224	90277501	.	+	.	gene_id "ENSMUSG00000100533.6"; gene_type "lincRNA"; gene_name "Gm29504"; level 2; havana_gene "OTTMUSG00000047351.1";
mm10-chrY	HAVANA	transcript	90275224	90277501	.	+	.	gene_id "ENSMUSG00000100533.6"; transcript_id "ENSMUST00000186377.6"; gene_type "lincRNA"; gene_name "Gm29504"; transcript_type "lincRNA"; transcript_name "Gm29504-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047351.1"; havana_transcript "OTTMUST00000122359.1";
mm10-chrY	HAVANA	exon	90275224	90275324	.	+	.	gene_id "ENSMUSG00000100533.6"; transcript_id "ENSMUST00000186377.6"; gene_type "lincRNA"; gene_name "Gm29504"; transcript_type "lincRNA"; transcript_name "Gm29504-202"; exon_number 1; exon_id "ENSMUSE00001320099.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047351.1"; havana_transcript "OTTMUST00000122359.1";
mm10-chrY	HAVANA	exon	90275812	90275993	.	+	.	gene_id "ENSMUSG00000100533.6"; transcript_id "ENSMUST00000186377.6"; gene_type "lincRNA"; gene_name "Gm29504"; transcript_type "lincRNA"; transcript_name "Gm29504-202"; exon_number 2; exon_id "ENSMUSE00001329927.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047351.1"; havana_transcript "OTTMUST00000122359.1";
mm10-chrY	HAVANA	exon	90277433	90277501	.	+	.	gene_id "ENSMUSG00000100533.6"; transcript_id "ENSMUST00000186377.6"; gene_type "lincRNA"; gene_name "Gm29504"; transcript_type "lincRNA"; transcript_name "Gm29504-202"; exon_number 3; exon_id "ENSMUSE00001329614.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047351.1"; havana_transcript "OTTMUST00000122359.1";
mm10-chrY	HAVANA	transcript	90275224	90277501	.	+	.	gene_id "ENSMUSG00000100533.6"; transcript_id "ENSMUST00000185605.1"; gene_type "lincRNA"; gene_name "Gm29504"; transcript_type "lincRNA"; transcript_name "Gm29504-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047351.1"; havana_transcript "OTTMUST00000122360.1";
mm10-chrY	HAVANA	exon	90275224	90275324	.	+	.	gene_id "ENSMUSG00000100533.6"; transcript_id "ENSMUST00000185605.1"; gene_type "lincRNA"; gene_name "Gm29504"; transcript_type "lincRNA"; transcript_name "Gm29504-201"; exon_number 1; exon_id "ENSMUSE00001320099.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047351.1"; havana_transcript "OTTMUST00000122360.1";
mm10-chrY	HAVANA	exon	90275812	90275993	.	+	.	gene_id "ENSMUSG00000100533.6"; transcript_id "ENSMUST00000185605.1"; gene_type "lincRNA"; gene_name "Gm29504"; transcript_type "lincRNA"; transcript_name "Gm29504-201"; exon_number 2; exon_id "ENSMUSE00001329927.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047351.1"; havana_transcript "OTTMUST00000122360.1";
mm10-chrY	HAVANA	exon	90276721	90276905	.	+	.	gene_id "ENSMUSG00000100533.6"; transcript_id "ENSMUST00000185605.1"; gene_type "lincRNA"; gene_name "Gm29504"; transcript_type "lincRNA"; transcript_name "Gm29504-201"; exon_number 3; exon_id "ENSMUSE00001331064.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047351.1"; havana_transcript "OTTMUST00000122360.1";
mm10-chrY	HAVANA	exon	90277433	90277501	.	+	.	gene_id "ENSMUSG00000100533.6"; transcript_id "ENSMUST00000185605.1"; gene_type "lincRNA"; gene_name "Gm29504"; transcript_type "lincRNA"; transcript_name "Gm29504-201"; exon_number 4; exon_id "ENSMUSE00001329614.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047351.1"; havana_transcript "OTTMUST00000122360.1";
mm10-chrY	HAVANA	gene	90401248	90433263	.	+	.	gene_id "ENSMUSG00000096178.7"; gene_type "protein_coding"; gene_name "Gm20837"; level 2; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	HAVANA	transcript	90401248	90433263	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	exon	90401248	90401303	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 1; exon_id "ENSMUSE00001335728.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	exon	90402662	90402796	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 2; exon_id "ENSMUSE00001320234.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	CDS	90402679	90402796	.	+	0	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 2; exon_id "ENSMUSE00001320234.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	start_codon	90402679	90402681	.	+	0	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 2; exon_id "ENSMUSE00001320234.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	exon	90414097	90414163	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 3; exon_id "ENSMUSE00001056992.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	CDS	90414097	90414163	.	+	2	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 3; exon_id "ENSMUSE00001056992.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	exon	90414714	90414748	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 4; exon_id "ENSMUSE00001014770.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	CDS	90414714	90414748	.	+	1	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 4; exon_id "ENSMUSE00001014770.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	exon	90429593	90429710	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 5; exon_id "ENSMUSE00000990166.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	CDS	90429593	90429710	.	+	2	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 5; exon_id "ENSMUSE00000990166.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	exon	90430461	90430560	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 6; exon_id "ENSMUSE00001322878.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	CDS	90430461	90430560	.	+	1	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 6; exon_id "ENSMUSE00001322878.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	exon	90432573	90432671	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 7; exon_id "ENSMUSE00001328497.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	CDS	90432573	90432671	.	+	0	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 7; exon_id "ENSMUSE00001328497.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	exon	90433030	90433263	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 8; exon_id "ENSMUSE00001333279.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	CDS	90433030	90433056	.	+	0	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 8; exon_id "ENSMUSE00001333279.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	stop_codon	90433057	90433059	.	+	0	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 8; exon_id "ENSMUSE00001333279.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	UTR	90401248	90401303	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 1; exon_id "ENSMUSE00001335728.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	UTR	90402662	90402678	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 2; exon_id "ENSMUSE00001320234.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	HAVANA	UTR	90433057	90433263	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000190558.6"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-202"; exon_number 8; exon_id "ENSMUSE00001333279.1"; level 2; protein_id "ENSMUSP00000139688.1"; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; tag "appris_principal_1"; havana_gene "OTTMUSG00000047352.1"; havana_transcript "OTTMUST00000122361.1";
mm10-chrY	ENSEMBL	transcript	90402688	90430527	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	exon	90402688	90402796	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 1; exon_id "ENSMUSE00001072614.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	CDS	90402688	90402796	.	+	0	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 1; exon_id "ENSMUSE00001072614.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	start_codon	90402688	90402690	.	+	0	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 1; exon_id "ENSMUSE00001072614.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	exon	90414097	90414163	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 2; exon_id "ENSMUSE00001056992.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	CDS	90414097	90414163	.	+	2	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 2; exon_id "ENSMUSE00001056992.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	exon	90414714	90414748	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 3; exon_id "ENSMUSE00001014770.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	CDS	90414714	90414748	.	+	1	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 3; exon_id "ENSMUSE00001014770.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	exon	90421788	90421854	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 4; exon_id "ENSMUSE00001020976.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	CDS	90421788	90421854	.	+	2	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 4; exon_id "ENSMUSE00001020976.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	exon	90422417	90422451	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 5; exon_id "ENSMUSE00001012951.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	CDS	90422417	90422451	.	+	1	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 5; exon_id "ENSMUSE00001012951.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	exon	90429593	90429710	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 6; exon_id "ENSMUSE00000990166.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	CDS	90429593	90429710	.	+	2	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 6; exon_id "ENSMUSE00000990166.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	exon	90430461	90430527	.	+	.	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 7; exon_id "ENSMUSE00000976472.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	ENSEMBL	CDS	90430461	90430527	.	+	1	gene_id "ENSMUSG00000096178.7"; transcript_id "ENSMUST00000178446.1"; gene_type "protein_coding"; gene_name "Gm20837"; transcript_type "protein_coding"; transcript_name "Gm20837-201"; exon_number 7; exon_id "ENSMUSE00000976472.1"; level 3; protein_id "ENSMUSP00000137363.1"; transcript_support_level "5"; tag "basic"; havana_gene "OTTMUSG00000047352.1";
mm10-chrY	HAVANA	gene	90499047	90531645	.	-	.	gene_id "ENSMUSG00000100964.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; level 2; havana_gene "OTTMUSG00000047353.1";
mm10-chrY	HAVANA	transcript	90499047	90531645	.	-	.	gene_id "ENSMUSG00000100964.1"; transcript_id "ENSMUST00000191044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29503-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047353.1"; havana_transcript "OTTMUST00000122362.1";
mm10-chrY	HAVANA	exon	90531602	90531645	.	-	.	gene_id "ENSMUSG00000100964.1"; transcript_id "ENSMUST00000191044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29503-201"; exon_number 1; exon_id "ENSMUSE00001317997.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047353.1"; havana_transcript "OTTMUST00000122362.1";
mm10-chrY	HAVANA	exon	90530089	90530220	.	-	.	gene_id "ENSMUSG00000100964.1"; transcript_id "ENSMUST00000191044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29503-201"; exon_number 2; exon_id "ENSMUSE00001322946.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047353.1"; havana_transcript "OTTMUST00000122362.1";
mm10-chrY	HAVANA	exon	90524715	90524781	.	-	.	gene_id "ENSMUSG00000100964.1"; transcript_id "ENSMUST00000191044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29503-201"; exon_number 3; exon_id "ENSMUSE00001320944.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047353.1"; havana_transcript "OTTMUST00000122362.1";
mm10-chrY	HAVANA	exon	90524103	90524137	.	-	.	gene_id "ENSMUSG00000100964.1"; transcript_id "ENSMUST00000191044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29503-201"; exon_number 4; exon_id "ENSMUSE00001321622.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047353.1"; havana_transcript "OTTMUST00000122362.1";
mm10-chrY	HAVANA	exon	90517032	90517098	.	-	.	gene_id "ENSMUSG00000100964.1"; transcript_id "ENSMUST00000191044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29503-201"; exon_number 5; exon_id "ENSMUSE00001331369.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047353.1"; havana_transcript "OTTMUST00000122362.1";
mm10-chrY	HAVANA	exon	90516433	90516467	.	-	.	gene_id "ENSMUSG00000100964.1"; transcript_id "ENSMUST00000191044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29503-201"; exon_number 6; exon_id "ENSMUSE00001318131.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047353.1"; havana_transcript "OTTMUST00000122362.1";
mm10-chrY	HAVANA	exon	90502620	90502737	.	-	.	gene_id "ENSMUSG00000100964.1"; transcript_id "ENSMUST00000191044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29503-201"; exon_number 7; exon_id "ENSMUSE00001329715.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047353.1"; havana_transcript "OTTMUST00000122362.1";
mm10-chrY	HAVANA	exon	90501764	90501863	.	-	.	gene_id "ENSMUSG00000100964.1"; transcript_id "ENSMUST00000191044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29503-201"; exon_number 8; exon_id "ENSMUSE00001321095.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047353.1"; havana_transcript "OTTMUST00000122362.1";
mm10-chrY	HAVANA	exon	90499641	90499737	.	-	.	gene_id "ENSMUSG00000100964.1"; transcript_id "ENSMUST00000191044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29503-201"; exon_number 9; exon_id "ENSMUSE00001332652.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047353.1"; havana_transcript "OTTMUST00000122362.1";
mm10-chrY	HAVANA	exon	90499047	90499281	.	-	.	gene_id "ENSMUSG00000100964.1"; transcript_id "ENSMUST00000191044.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm29503"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm29503-201"; exon_number 10; exon_id "ENSMUSE00001335222.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047353.1"; havana_transcript "OTTMUST00000122362.1";
mm10-chrY	HAVANA	gene	90603501	90605864	.	-	.	gene_id "ENSMUSG00000099619.6"; gene_type "lincRNA"; gene_name "Gm28300"; level 2; havana_gene "OTTMUSG00000047371.1";
mm10-chrY	HAVANA	transcript	90603501	90605864	.	-	.	gene_id "ENSMUSG00000099619.6"; transcript_id "ENSMUST00000189170.6"; gene_type "lincRNA"; gene_name "Gm28300"; transcript_type "lincRNA"; transcript_name "Gm28300-202"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047371.1"; havana_transcript "OTTMUST00000122396.1";
mm10-chrY	HAVANA	exon	90605679	90605864	.	-	.	gene_id "ENSMUSG00000099619.6"; transcript_id "ENSMUST00000189170.6"; gene_type "lincRNA"; gene_name "Gm28300"; transcript_type "lincRNA"; transcript_name "Gm28300-202"; exon_number 1; exon_id "ENSMUSE00001334454.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047371.1"; havana_transcript "OTTMUST00000122396.1";
mm10-chrY	HAVANA	exon	90605010	90605191	.	-	.	gene_id "ENSMUSG00000099619.6"; transcript_id "ENSMUST00000189170.6"; gene_type "lincRNA"; gene_name "Gm28300"; transcript_type "lincRNA"; transcript_name "Gm28300-202"; exon_number 2; exon_id "ENSMUSE00001319467.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047371.1"; havana_transcript "OTTMUST00000122396.1";
mm10-chrY	HAVANA	exon	90604098	90604282	.	-	.	gene_id "ENSMUSG00000099619.6"; transcript_id "ENSMUST00000189170.6"; gene_type "lincRNA"; gene_name "Gm28300"; transcript_type "lincRNA"; transcript_name "Gm28300-202"; exon_number 3; exon_id "ENSMUSE00001328162.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047371.1"; havana_transcript "OTTMUST00000122396.1";
mm10-chrY	HAVANA	exon	90603501	90603569	.	-	.	gene_id "ENSMUSG00000099619.6"; transcript_id "ENSMUST00000189170.6"; gene_type "lincRNA"; gene_name "Gm28300"; transcript_type "lincRNA"; transcript_name "Gm28300-202"; exon_number 4; exon_id "ENSMUSE00001329258.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047371.1"; havana_transcript "OTTMUST00000122396.1";
mm10-chrY	HAVANA	transcript	90603501	90605864	.	-	.	gene_id "ENSMUSG00000099619.6"; transcript_id "ENSMUST00000185955.1"; gene_type "lincRNA"; gene_name "Gm28300"; transcript_type "lincRNA"; transcript_name "Gm28300-201"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047371.1"; havana_transcript "OTTMUST00000122397.1";
mm10-chrY	HAVANA	exon	90605679	90605864	.	-	.	gene_id "ENSMUSG00000099619.6"; transcript_id "ENSMUST00000185955.1"; gene_type "lincRNA"; gene_name "Gm28300"; transcript_type "lincRNA"; transcript_name "Gm28300-201"; exon_number 1; exon_id "ENSMUSE00001334454.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047371.1"; havana_transcript "OTTMUST00000122397.1";
mm10-chrY	HAVANA	exon	90605010	90605191	.	-	.	gene_id "ENSMUSG00000099619.6"; transcript_id "ENSMUST00000185955.1"; gene_type "lincRNA"; gene_name "Gm28300"; transcript_type "lincRNA"; transcript_name "Gm28300-201"; exon_number 2; exon_id "ENSMUSE00001319467.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047371.1"; havana_transcript "OTTMUST00000122397.1";
mm10-chrY	HAVANA	exon	90603501	90603569	.	-	.	gene_id "ENSMUSG00000099619.6"; transcript_id "ENSMUST00000185955.1"; gene_type "lincRNA"; gene_name "Gm28300"; transcript_type "lincRNA"; transcript_name "Gm28300-201"; exon_number 3; exon_id "ENSMUSE00001329258.1"; level 2; transcript_support_level "1"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047371.1"; havana_transcript "OTTMUST00000122397.1";
mm10-chrY	HAVANA	gene	90665346	90667625	.	-	.	gene_id "ENSMUSG00000099399.6"; gene_type "lincRNA"; gene_name "Gm28301"; level 2; havana_gene "OTTMUSG00000047372.1";
mm10-chrY	HAVANA	transcript	90665346	90667625	.	-	.	gene_id "ENSMUSG00000099399.6"; transcript_id "ENSMUST00000187582.6"; gene_type "lincRNA"; gene_name "Gm28301"; transcript_type "lincRNA"; transcript_name "Gm28301-201"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047372.1"; havana_transcript "OTTMUST00000122398.1";
mm10-chrY	HAVANA	exon	90667525	90667625	.	-	.	gene_id "ENSMUSG00000099399.6"; transcript_id "ENSMUST00000187582.6"; gene_type "lincRNA"; gene_name "Gm28301"; transcript_type "lincRNA"; transcript_name "Gm28301-201"; exon_number 1; exon_id "ENSMUSE00001324512.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047372.1"; havana_transcript "OTTMUST00000122398.1";
mm10-chrY	HAVANA	exon	90666856	90667037	.	-	.	gene_id "ENSMUSG00000099399.6"; transcript_id "ENSMUST00000187582.6"; gene_type "lincRNA"; gene_name "Gm28301"; transcript_type "lincRNA"; transcript_name "Gm28301-201"; exon_number 2; exon_id "ENSMUSE00001320134.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047372.1"; havana_transcript "OTTMUST00000122398.1";
mm10-chrY	HAVANA	exon	90665943	90666127	.	-	.	gene_id "ENSMUSG00000099399.6"; transcript_id "ENSMUST00000187582.6"; gene_type "lincRNA"; gene_name "Gm28301"; transcript_type "lincRNA"; transcript_name "Gm28301-201"; exon_number 3; exon_id "ENSMUSE00001324837.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047372.1"; havana_transcript "OTTMUST00000122398.1";
mm10-chrY	HAVANA	exon	90665346	90665414	.	-	.	gene_id "ENSMUSG00000099399.6"; transcript_id "ENSMUST00000187582.6"; gene_type "lincRNA"; gene_name "Gm28301"; transcript_type "lincRNA"; transcript_name "Gm28301-201"; exon_number 4; exon_id "ENSMUSE00001334364.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; tag "basic"; havana_gene "OTTMUSG00000047372.1"; havana_transcript "OTTMUST00000122398.1";
mm10-chrY	HAVANA	transcript	90665346	90667625	.	-	.	gene_id "ENSMUSG00000099399.6"; transcript_id "ENSMUST00000191048.1"; gene_type "lincRNA"; gene_name "Gm28301"; transcript_type "lincRNA"; transcript_name "Gm28301-202"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047372.1"; havana_transcript "OTTMUST00000122399.1";
mm10-chrY	HAVANA	exon	90667525	90667625	.	-	.	gene_id "ENSMUSG00000099399.6"; transcript_id "ENSMUST00000191048.1"; gene_type "lincRNA"; gene_name "Gm28301"; transcript_type "lincRNA"; transcript_name "Gm28301-202"; exon_number 1; exon_id "ENSMUSE00001324512.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047372.1"; havana_transcript "OTTMUST00000122399.1";
mm10-chrY	HAVANA	exon	90666856	90667037	.	-	.	gene_id "ENSMUSG00000099399.6"; transcript_id "ENSMUST00000191048.1"; gene_type "lincRNA"; gene_name "Gm28301"; transcript_type "lincRNA"; transcript_name "Gm28301-202"; exon_number 2; exon_id "ENSMUSE00001320134.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047372.1"; havana_transcript "OTTMUST00000122399.1";
mm10-chrY	HAVANA	exon	90665346	90665414	.	-	.	gene_id "ENSMUSG00000099399.6"; transcript_id "ENSMUST00000191048.1"; gene_type "lincRNA"; gene_name "Gm28301"; transcript_type "lincRNA"; transcript_name "Gm28301-202"; exon_number 3; exon_id "ENSMUSE00001334364.1"; level 2; transcript_support_level "5"; tag "not_best_in_genome_evidence"; havana_gene "OTTMUSG00000047372.1"; havana_transcript "OTTMUST00000122399.1";
mm10-chrY	HAVANA	gene	90753057	90763485	.	+	.	gene_id "ENSMUSG00000095134.2"; gene_type "unprocessed_pseudogene"; gene_name "Mid1-ps1"; level 2; havana_gene "OTTMUSG00000047373.1";
mm10-chrY	HAVANA	transcript	90753057	90763485	.	+	.	gene_id "ENSMUSG00000095134.2"; transcript_id "ENSMUST00000167967.3"; gene_type "unprocessed_pseudogene"; gene_name "Mid1-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Mid1-ps1-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047373.1"; havana_transcript "OTTMUST00000122400.1";
mm10-chrY	HAVANA	exon	90753057	90753164	.	+	.	gene_id "ENSMUSG00000095134.2"; transcript_id "ENSMUST00000167967.3"; gene_type "unprocessed_pseudogene"; gene_name "Mid1-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Mid1-ps1-201"; exon_number 1; exon_id "ENSMUSE00001325882.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047373.1"; havana_transcript "OTTMUST00000122400.1";
mm10-chrY	HAVANA	exon	90757301	90757449	.	+	.	gene_id "ENSMUSG00000095134.2"; transcript_id "ENSMUST00000167967.3"; gene_type "unprocessed_pseudogene"; gene_name "Mid1-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Mid1-ps1-201"; exon_number 2; exon_id "ENSMUSE00001064178.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047373.1"; havana_transcript "OTTMUST00000122400.1";
mm10-chrY	HAVANA	exon	90758542	90758669	.	+	.	gene_id "ENSMUSG00000095134.2"; transcript_id "ENSMUST00000167967.3"; gene_type "unprocessed_pseudogene"; gene_name "Mid1-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Mid1-ps1-201"; exon_number 3; exon_id "ENSMUSE00001057680.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047373.1"; havana_transcript "OTTMUST00000122400.1";
mm10-chrY	HAVANA	exon	90759522	90759665	.	+	.	gene_id "ENSMUSG00000095134.2"; transcript_id "ENSMUST00000167967.3"; gene_type "unprocessed_pseudogene"; gene_name "Mid1-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Mid1-ps1-201"; exon_number 4; exon_id "ENSMUSE00001076808.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047373.1"; havana_transcript "OTTMUST00000122400.1";
mm10-chrY	HAVANA	exon	90760453	90760614	.	+	.	gene_id "ENSMUSG00000095134.2"; transcript_id "ENSMUST00000167967.3"; gene_type "unprocessed_pseudogene"; gene_name "Mid1-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Mid1-ps1-201"; exon_number 5; exon_id "ENSMUSE00000971381.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047373.1"; havana_transcript "OTTMUST00000122400.1";
mm10-chrY	HAVANA	exon	90762079	90762286	.	+	.	gene_id "ENSMUSG00000095134.2"; transcript_id "ENSMUST00000167967.3"; gene_type "unprocessed_pseudogene"; gene_name "Mid1-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Mid1-ps1-201"; exon_number 6; exon_id "ENSMUSE00001024291.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047373.1"; havana_transcript "OTTMUST00000122400.1";
mm10-chrY	HAVANA	exon	90763137	90763485	.	+	.	gene_id "ENSMUSG00000095134.2"; transcript_id "ENSMUST00000167967.3"; gene_type "unprocessed_pseudogene"; gene_name "Mid1-ps1"; transcript_type "unprocessed_pseudogene"; transcript_name "Mid1-ps1-201"; exon_number 7; exon_id "ENSMUSE00000889347.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047373.1"; havana_transcript "OTTMUST00000122400.1";
mm10-chrY	ENSEMBL	gene	90754513	90754821	.	-	.	gene_id "ENSMUSG00000095366.1"; gene_type "protein_coding"; gene_name "Gm21860"; level 3;
mm10-chrY	ENSEMBL	transcript	90754513	90754821	.	-	.	gene_id "ENSMUSG00000095366.1"; transcript_id "ENSMUST00000177893.1"; gene_type "protein_coding"; gene_name "Gm21860"; transcript_type "protein_coding"; transcript_name "Gm21860-201"; level 3; protein_id "ENSMUSP00000136050.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	90754513	90754821	.	-	.	gene_id "ENSMUSG00000095366.1"; transcript_id "ENSMUST00000177893.1"; gene_type "protein_coding"; gene_name "Gm21860"; transcript_type "protein_coding"; transcript_name "Gm21860-201"; exon_number 1; exon_id "ENSMUSE00000975407.1"; level 3; protein_id "ENSMUSP00000136050.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	90754516	90754821	.	-	0	gene_id "ENSMUSG00000095366.1"; transcript_id "ENSMUST00000177893.1"; gene_type "protein_coding"; gene_name "Gm21860"; transcript_type "protein_coding"; transcript_name "Gm21860-201"; exon_number 1; exon_id "ENSMUSE00000975407.1"; level 3; protein_id "ENSMUSP00000136050.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	90754819	90754821	.	-	0	gene_id "ENSMUSG00000095366.1"; transcript_id "ENSMUST00000177893.1"; gene_type "protein_coding"; gene_name "Gm21860"; transcript_type "protein_coding"; transcript_name "Gm21860-201"; exon_number 1; exon_id "ENSMUSE00000975407.1"; level 3; protein_id "ENSMUSP00000136050.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	90754513	90754515	.	-	0	gene_id "ENSMUSG00000095366.1"; transcript_id "ENSMUST00000177893.1"; gene_type "protein_coding"; gene_name "Gm21860"; transcript_type "protein_coding"; transcript_name "Gm21860-201"; exon_number 1; exon_id "ENSMUSE00000975407.1"; level 3; protein_id "ENSMUSP00000136050.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	90754513	90754515	.	-	.	gene_id "ENSMUSG00000095366.1"; transcript_id "ENSMUST00000177893.1"; gene_type "protein_coding"; gene_name "Gm21860"; transcript_type "protein_coding"; transcript_name "Gm21860-201"; exon_number 1; exon_id "ENSMUSE00000975407.1"; level 3; protein_id "ENSMUSP00000136050.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	gene	90784738	90816464	.	+	.	gene_id "ENSMUSG00000096768.7"; gene_type "protein_coding"; gene_name "Gm47283"; level 3;
mm10-chrY	ENSEMBL	transcript	90784738	90816439	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179483.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-204"; level 3; protein_id "ENSMUSP00000136353.1"; transcript_support_level "1"; tag "basic";
mm10-chrY	ENSEMBL	exon	90784738	90784822	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179483.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-204"; exon_number 1; exon_id "ENSMUSE00001044087.1"; level 3; protein_id "ENSMUSP00000136353.1"; transcript_support_level "1"; tag "basic";
mm10-chrY	ENSEMBL	CDS	90784808	90784822	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179483.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-204"; exon_number 1; exon_id "ENSMUSE00001044087.1"; level 3; protein_id "ENSMUSP00000136353.1"; transcript_support_level "1"; tag "basic";
mm10-chrY	ENSEMBL	start_codon	90784808	90784810	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179483.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-204"; exon_number 1; exon_id "ENSMUSE00001044087.1"; level 3; protein_id "ENSMUSP00000136353.1"; transcript_support_level "1"; tag "basic";
mm10-chrY	ENSEMBL	exon	90785590	90785979	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179483.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-204"; exon_number 2; exon_id "ENSMUSE00001002838.1"; level 3; protein_id "ENSMUSP00000136353.1"; transcript_support_level "1"; tag "basic";
mm10-chrY	ENSEMBL	CDS	90785590	90785979	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179483.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-204"; exon_number 2; exon_id "ENSMUSE00001002838.1"; level 3; protein_id "ENSMUSP00000136353.1"; transcript_support_level "1"; tag "basic";
mm10-chrY	ENSEMBL	exon	90793296	90793417	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179483.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-204"; exon_number 3; exon_id "ENSMUSE00001306121.1"; level 3; protein_id "ENSMUSP00000136353.1"; transcript_support_level "1"; tag "basic";
mm10-chrY	ENSEMBL	CDS	90793296	90793417	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179483.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-204"; exon_number 3; exon_id "ENSMUSE00001306121.1"; level 3; protein_id "ENSMUSP00000136353.1"; transcript_support_level "1"; tag "basic";
mm10-chrY	ENSEMBL	exon	90816349	90816439	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179483.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-204"; exon_number 4; exon_id "ENSMUSE00000985885.1"; level 3; protein_id "ENSMUSP00000136353.1"; transcript_support_level "1"; tag "basic";
mm10-chrY	ENSEMBL	CDS	90816349	90816439	.	+	1	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179483.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-204"; exon_number 4; exon_id "ENSMUSE00000985885.1"; level 3; protein_id "ENSMUSP00000136353.1"; transcript_support_level "1"; tag "basic";
mm10-chrY	ENSEMBL	UTR	90784738	90784807	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179483.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-204"; exon_number 1; exon_id "ENSMUSE00001044087.1"; level 3; protein_id "ENSMUSP00000136353.1"; transcript_support_level "1"; tag "basic";
mm10-chrY	ENSEMBL	transcript	90785442	90816464	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	exon	90785442	90785979	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 1; exon_id "ENSMUSE00000993567.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	CDS	90785671	90785979	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 1; exon_id "ENSMUSE00000993567.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	start_codon	90785671	90785673	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 1; exon_id "ENSMUSE00000993567.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	exon	90793296	90793417	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 2; exon_id "ENSMUSE00001306121.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	CDS	90793296	90793417	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 2; exon_id "ENSMUSE00001306121.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	exon	90816349	90816433	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 3; exon_id "ENSMUSE00000978391.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	CDS	90816349	90816433	.	+	1	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 3; exon_id "ENSMUSE00000978391.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	exon	90816436	90816464	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 4; exon_id "ENSMUSE00001074926.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	CDS	90816436	90816444	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 4; exon_id "ENSMUSE00001074926.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	stop_codon	90816445	90816447	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 4; exon_id "ENSMUSE00001074926.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	UTR	90785442	90785670	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 1; exon_id "ENSMUSE00000993567.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	UTR	90816445	90816464	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177591.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-201"; exon_number 4; exon_id "ENSMUSE00001074926.1"; level 3; protein_id "ENSMUSP00000137050.1"; transcript_support_level "5"; tag "basic"; tag "appris_principal_5";
mm10-chrY	ENSEMBL	transcript	90785501	90816464	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	exon	90785501	90785758	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 1; exon_id "ENSMUSE00000977530.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	CDS	90785660	90785758	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 1; exon_id "ENSMUSE00000977530.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	start_codon	90785660	90785662	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 1; exon_id "ENSMUSE00000977530.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	exon	90785764	90785964	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 2; exon_id "ENSMUSE00001081208.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	CDS	90785764	90785964	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 2; exon_id "ENSMUSE00001081208.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	exon	90785969	90785979	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 3; exon_id "ENSMUSE00001054852.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	CDS	90785969	90785979	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 3; exon_id "ENSMUSE00001054852.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	exon	90793296	90793417	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 4; exon_id "ENSMUSE00001269726.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	CDS	90793296	90793350	.	+	1	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 4; exon_id "ENSMUSE00001269726.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	stop_codon	90793351	90793353	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 4; exon_id "ENSMUSE00001269726.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	exon	90816349	90816464	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 5; exon_id "ENSMUSE00001088261.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	UTR	90785501	90785659	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 1; exon_id "ENSMUSE00000977530.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	UTR	90793351	90793417	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 4; exon_id "ENSMUSE00001269726.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	UTR	90816349	90816464	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000177671.7"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-202"; exon_number 5; exon_id "ENSMUSE00001088261.1"; level 3; protein_id "ENSMUSP00000136097.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	transcript	90785586	90816464	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	exon	90785586	90785689	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 1; exon_id "ENSMUSE00000990752.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	CDS	90785660	90785689	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 1; exon_id "ENSMUSE00000990752.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	start_codon	90785660	90785662	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 1; exon_id "ENSMUSE00000990752.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	exon	90785694	90785696	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 2; exon_id "ENSMUSE00000967032.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	CDS	90785694	90785696	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 2; exon_id "ENSMUSE00000967032.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	exon	90785701	90785979	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 3; exon_id "ENSMUSE00000970449.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	CDS	90785701	90785979	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 3; exon_id "ENSMUSE00000970449.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	exon	90793296	90793680	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 4; exon_id "ENSMUSE00001023667.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	CDS	90793296	90793418	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 4; exon_id "ENSMUSE00001023667.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	stop_codon	90793419	90793421	.	+	0	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 4; exon_id "ENSMUSE00001023667.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	exon	90816349	90816464	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 5; exon_id "ENSMUSE00001088261.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	UTR	90785586	90785659	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 1; exon_id "ENSMUSE00000990752.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	UTR	90793419	90793680	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 4; exon_id "ENSMUSE00001023667.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	ENSEMBL	UTR	90816349	90816464	.	+	.	gene_id "ENSMUSG00000096768.7"; transcript_id "ENSMUST00000179077.1"; gene_type "protein_coding"; gene_name "Gm47283"; transcript_type "protein_coding"; transcript_name "Gm47283-203"; exon_number 5; exon_id "ENSMUSE00001088261.1"; level 3; protein_id "ENSMUSP00000137622.1"; transcript_support_level "5"; tag "basic"; tag "appris_alternative_2";
mm10-chrY	HAVANA	gene	90837413	90844040	.	+	.	gene_id "ENSMUSG00000099871.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21742"; level 2; havana_gene "OTTMUSG00000047374.1";
mm10-chrY	HAVANA	transcript	90837413	90844040	.	+	.	gene_id "ENSMUSG00000099871.1"; transcript_id "ENSMUST00000189352.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21742"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21742-201"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047374.1"; havana_transcript "OTTMUST00000122401.1";
mm10-chrY	HAVANA	exon	90837413	90837520	.	+	.	gene_id "ENSMUSG00000099871.1"; transcript_id "ENSMUST00000189352.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21742"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21742-201"; exon_number 1; exon_id "ENSMUSE00001328218.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047374.1"; havana_transcript "OTTMUST00000122401.1";
mm10-chrY	HAVANA	exon	90841657	90841805	.	+	.	gene_id "ENSMUSG00000099871.1"; transcript_id "ENSMUST00000189352.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21742"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21742-201"; exon_number 2; exon_id "ENSMUSE00001328844.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047374.1"; havana_transcript "OTTMUST00000122401.1";
mm10-chrY	HAVANA	exon	90842898	90843025	.	+	.	gene_id "ENSMUSG00000099871.1"; transcript_id "ENSMUST00000189352.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21742"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21742-201"; exon_number 3; exon_id "ENSMUSE00001328329.1"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047374.1"; havana_transcript "OTTMUST00000122401.1";
mm10-chrY	HAVANA	exon	90843878	90844040	.	+	.	gene_id "ENSMUSG00000099871.1"; transcript_id "ENSMUST00000189352.1"; gene_type "unprocessed_pseudogene"; gene_name "Gm21742"; transcript_type "unprocessed_pseudogene"; transcript_name "Gm21742-201"; exon_number 4; exon_id "ENSMUSE00001032506.2"; level 2; transcript_support_level "NA"; ont "PGO:0000005"; tag "basic"; havana_gene "OTTMUSG00000047374.1"; havana_transcript "OTTMUST00000122401.1";
mm10-chrY	ENSEMBL	gene	90838869	90839177	.	-	.	gene_id "ENSMUSG00000096850.1"; gene_type "protein_coding"; gene_name "Gm21748"; level 3;
mm10-chrY	ENSEMBL	transcript	90838869	90839177	.	-	.	gene_id "ENSMUSG00000096850.1"; transcript_id "ENSMUST00000179623.1"; gene_type "protein_coding"; gene_name "Gm21748"; transcript_type "protein_coding"; transcript_name "Gm21748-201"; level 3; protein_id "ENSMUSP00000137361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	exon	90838869	90839177	.	-	.	gene_id "ENSMUSG00000096850.1"; transcript_id "ENSMUST00000179623.1"; gene_type "protein_coding"; gene_name "Gm21748"; transcript_type "protein_coding"; transcript_name "Gm21748-201"; exon_number 1; exon_id "ENSMUSE00001062768.1"; level 3; protein_id "ENSMUSP00000137361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	CDS	90838872	90839177	.	-	0	gene_id "ENSMUSG00000096850.1"; transcript_id "ENSMUST00000179623.1"; gene_type "protein_coding"; gene_name "Gm21748"; transcript_type "protein_coding"; transcript_name "Gm21748-201"; exon_number 1; exon_id "ENSMUSE00001062768.1"; level 3; protein_id "ENSMUSP00000137361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	start_codon	90839175	90839177	.	-	0	gene_id "ENSMUSG00000096850.1"; transcript_id "ENSMUST00000179623.1"; gene_type "protein_coding"; gene_name "Gm21748"; transcript_type "protein_coding"; transcript_name "Gm21748-201"; exon_number 1; exon_id "ENSMUSE00001062768.1"; level 3; protein_id "ENSMUSP00000137361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	stop_codon	90838869	90838871	.	-	0	gene_id "ENSMUSG00000096850.1"; transcript_id "ENSMUST00000179623.1"; gene_type "protein_coding"; gene_name "Gm21748"; transcript_type "protein_coding"; transcript_name "Gm21748-201"; exon_number 1; exon_id "ENSMUSE00001062768.1"; level 3; protein_id "ENSMUSP00000137361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";
mm10-chrY	ENSEMBL	UTR	90838869	90838871	.	-	.	gene_id "ENSMUSG00000096850.1"; transcript_id "ENSMUST00000179623.1"; gene_type "protein_coding"; gene_name "Gm21748"; transcript_type "protein_coding"; transcript_name "Gm21748-201"; exon_number 1; exon_id "ENSMUSE00001062768.1"; level 3; protein_id "ENSMUSP00000137361.1"; transcript_support_level "NA"; tag "basic"; tag "appris_principal_1";